HHSEARCH alignment of GI: 254780553 and SCOP domain: d1bvsa2

Alignment

Probab=99.89  E-value=5.5e-24  Score=177.50  Aligned_cols=70  Identities=33%  Similarity=0.476  Sum_probs=68.0

Q ss_pred             CHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             6779999999850100051011244315789999999851566875104571167999999997422211
Q gi|254780553|r   65 SDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAIS  134 (207)
Q Consensus        65 ~~~Er~~F~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~  134 (207)
                      +++||++|++|++|+|||||+||+|||+++++++++||.++|.+.|+++||||+|||+||++|||||+.+
T Consensus         1 d~eEr~~F~~Li~V~GIGpK~Al~iLs~~~~~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~eLk~Kl~~   70 (71)
T d1bvsa2           1 DAENRDLFLALLSVSGVGPRLAMATLAVHDAAALRQALADSDVASLTRVPGIGRRGAERIVLELADKVGP   70 (71)
T ss_dssp             SHHHHHHHHHHHTSSSCCHHHHHHHHHHSCHHHHHHHTTTTCHHHHHTSTTCCHHHHHHHHHHSSGGGSC
T ss_pred             CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             9789999999855488179999999984999999999981798884319997799999999999874136

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: DNA helicase RuvA subunit, middle domain
domain: DNA helicase RuvA subunit, middle domain
species: Mycobacterium leprae [TaxId: 1769]