HHSEARCH alignment of GI: 254780553 and SCOP domain: d1cuka1

Alignment

Probab=98.42  E-value=1.5e-07  Score=67.87  Aligned_cols=46  Identities=33%  Similarity=0.434  Sum_probs=39.7

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             3158999999996799989999999999851688889899999999974
Q gi|254780553|r  157 PSFAINAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAI  205 (207)
Q Consensus       157 ~~~~~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~L  205 (207)
                      ++...|+++||++|||++.++.+++.++.   .+..++|++||.|||.+
T Consensus         2 n~~~~eAi~AL~~LGY~~~ea~~av~~i~---~~~~s~E~lIk~ALk~m   47 (48)
T d1cuka1           2 DDAEQEAVARLVALGYKPQEASRMVSKIA---RPDASSETLIREALRAA   47 (48)
T ss_dssp             CHHHHHHHHHHHHHTCCHHHHHHHHHHSC---CSSCCHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHHH
T ss_conf             83699999999992998999999999863---79999999999999984

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: DNA helicase RuvA subunit, C-terminal domain
family: DNA helicase RuvA subunit, C-terminal domain
domain: DNA helicase RuvA subunit, C-terminal domain
species: Escherichia coli [TaxId: 562]