HHSEARCH alignment of GI: 254780553 and SCOP domain: d1dgsa1

Alignment
>d1dgsa1 a.60.2.2 (A:401-581) NAD+-dependent DNA ligase, domain 3 {Thermus filiformis [TaxId: 276]}
Probab=97.05  E-value=0.00077  Score=43.20  Aligned_cols=73  Identities=15%  Similarity=0.250  Sum_probs=49.4

Q ss_pred             CCCEEEEEEECHHHHHH--------------HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHH
Q ss_conf             88418999706779999--------------9998501000510112443157899999998515668751045711679
Q gi|254780553|r   55 QDQIRLFGFLSDLDRQW--------------FMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI  120 (207)
Q Consensus        55 Ed~~~LyGF~~~~Er~~--------------F~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKt  120 (207)
                      |+-..|-||....-..+              |..=++|.+||+++|-.+.+.+..   .+.+.+.+...|.+++|||+++
T Consensus        75 ~~l~~l~~~g~ksa~nl~~~Ie~sk~~~l~r~l~aLGI~~vG~~~Ak~La~~f~s---l~~l~~as~eeL~~I~GIG~~~  151 (181)
T d1dgsa1          75 EDLLGLERMGEKSAQNLLRQIEESKHRGLERLLYALGLPGVGEVLARNLARRFGT---MDRLLEASLEELIEVEEVGELT  151 (181)
T ss_dssp             HHHHTTSSCCSTTHHHHHHHHHHGGGCCHHHHHHHTTCSSCCHHHHHHHHHTTSB---HHHHTTCCHHHHHTSTTCCHHH
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCCCHHH
T ss_conf             7774366446078999999987411113899999987543447789999987620---0255412789886107827999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999742
Q gi|254780553|r  121 ASRIMTELKG  130 (207)
Q Consensus       121 A~rIi~ELk~  130 (207)
                      |+.|+-=+++
T Consensus       152 A~si~~ff~~  161 (181)
T d1dgsa1         152 ARAILETLKD  161 (181)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHCC
T ss_conf             9999999879


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: NAD+-dependent DNA ligase, domain 3
domain: NAD+-dependent DNA ligase, domain 3
species: Thermus filiformis [TaxId: 276]