HHSEARCH alignment of GI: 254780553 and SCOP domain: d1ixra2

Alignment

Probab=99.70  E-value=1.5e-17  Score=134.71  Aligned_cols=62  Identities=19%  Similarity=0.359  Sum_probs=60.5

Q ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEE
Q ss_conf             932589999996099799985883238970868898502479849999999973884189997
Q gi|254780553|r    1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGF   63 (207)
Q Consensus         1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF   63 (207)
                      ||+||+|++.++++++++||||||||+|++|.++++.+ +.|+++++|||++||||+++||||
T Consensus         1 MI~~i~G~i~~~~~~~ivi~~~GvGY~v~v~~~~~~~l-~~g~~v~l~t~~~vrED~~~LyGF   62 (62)
T d1ixra2           1 MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQAL-EEGKEVGVHTHLLLKEEGLSLYGF   62 (62)
T ss_dssp             CCCEEEEEEEEECSSEEEEECSSEEEEEECCHHHHHHC-CTTSEEEEEECCCCCSSCCCEEEE
T ss_pred             CEEEEEEEEEEECCCEEEEEECCEEEEEEECHHHHHHC-CCCCEEEEEEEEEEECCCCCCCCC
T ss_conf             93699999999749989999799899999899999626-699979999999990387872389

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: DNA helicase RuvA subunit, N-terminal domain
domain: DNA helicase RuvA subunit, N-terminal domain
species: Thermus thermophilus [TaxId: 274]