HHSEARCH alignment of GI: 254780553 and SCOP domain: d1ixsa_

Alignment

Probab=97.65  E-value=4.9e-05  Score=51.19  Aligned_cols=46  Identities=28%  Similarity=0.447  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             58999999996799989999999999851688889899999999974
Q gi|254780553|r  159 FAINAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAI  205 (207)
Q Consensus       159 ~~~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~L  205 (207)
                      ..+|++.||..|||.+.+++.++.++...+|.. +.+++||.||++|
T Consensus         4 a~~eA~~AL~aLGFrE~QvRsvVaell~~nP~a-~aq~lIr~aL~~L   49 (50)
T d1ixsa_           4 AAEEAVMALAALGFKEAQARAVVLDLLAQNPKA-RAQDLIKEALKRL   49 (50)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC-CHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHC
T ss_conf             289999999996421789999999998719542-3999999998654

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: DNA helicase RuvA subunit, C-terminal domain
family: DNA helicase RuvA subunit, C-terminal domain
domain: DNA helicase RuvA subunit, C-terminal domain
species: Thermus thermophilus [TaxId: 274]