HHSEARCH alignment of GI: 254780553 and SCOP domain: d1keaa_

Alignment

Probab=90.03  E-value=0.088  Score=29.50  Aligned_cols=51  Identities=20%  Similarity=0.331  Sum_probs=33.7

Q ss_pred             HHHCC--CHHHHHHHCCCCHHHHHHH---HHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             10005--1011244315789999999---85156687510457116799999999742
Q gi|254780553|r   78 VQGVG--ARVAMGVLSRITATELVES---IILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        78 V~GIG--pK~AL~iLs~l~~~~l~~a---I~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      +.|+|  .+.|-.|...  ...+..-   ..-.+...|.++||||+|||.-|+..--+
T Consensus        80 i~~~G~~~~KA~~l~~~--a~~i~~~~~g~~p~~~~~L~~LpGVG~kTA~~il~~~~~  135 (217)
T d1keaa_          80 IKEIGLSNQRAEQLKEL--ARVVINDYGGRVPRNRKAILDLPGVGKYTCAAVMCLAFG  135 (217)
T ss_dssp             TGGGSCHHHHHHHHHHH--HHHHHHHHTTSCCSCHHHHHTSTTCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHH--HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99998646788899999--999886126875302588998876424666788987458

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Mismatch glycosylase
domain: Thymine-DNA glycosylase
species: Archaeon Methanobacterium thermoformicicum [TaxId: 145262]