HHSEARCH alignment of GI: 254780553 and SCOP domain: d1kfta_

Alignment

Probab=97.81  E-value=4.9e-06  Score=57.86  Aligned_cols=53  Identities=28%  Similarity=0.476  Sum_probs=47.2

Q ss_pred             HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             98501000510112443157899999998515668751045711679999999974
Q gi|254780553|r   74 LLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELK  129 (207)
Q Consensus        74 ~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk  129 (207)
                      .|.+++||||++|-.++..+..   ...|.+.+...|.++||||+++|++|.--|+
T Consensus         3 ~L~~I~gVG~~~a~~L~~~F~s---~~~i~~As~eeL~~v~GIg~~~A~~I~~~l~   55 (56)
T d1kfta_           3 SLETIEGVGPKRRQMLLKYMGG---LQGLRNASVEEIAKVPGISQGLAEKIFWSLK   55 (56)
T ss_dssp             GGGGCTTCSSSHHHHHHHHHSC---HHHHHHCCHHHHTTSSSTTSHHHHHHHHHHT
T ss_pred             CCCCCCCCCHHHHHHHHHHHCC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             7535898009999999999399---9999986499998169979999999999876

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: Excinuclease UvrC C-terminal domain
domain: Excinuclease UvrC C-terminal domain
species: Escherichia coli [TaxId: 562]