HHSEARCH alignment of GI: 254780553 and SCOP domain: d1orna_

Alignment
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=90.29  E-value=0.082  Score=29.72  Aligned_cols=51  Identities=16%  Similarity=0.361  Sum_probs=30.4

Q ss_pred             HHHCC--CHHHHHHHCCCCHHHHHHH---HHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             10005--1011244315789999999---85156687510457116799999999742
Q gi|254780553|r   78 VQGVG--ARVAMGVLSRITATELVES---IILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        78 V~GIG--pK~AL~iLs~l~~~~l~~a---I~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      +.|+|  ...|-.+...  ...+.+-   ..-.|...|.++||||+|||.-|..---+
T Consensus        77 i~~~g~y~~ka~~l~~~--a~~i~~~~~g~vp~~~~~L~~LpGVG~kTA~~il~~a~~  132 (214)
T d1orna_          77 IRSIGLYRNKARNIQKL--CAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFG  132 (214)
T ss_dssp             TGGGSSHHHHHHHHHHH--HHHHHHHSTTSCCSCHHHHTTSTTCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHH--HHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHC
T ss_conf             21032410888999998--554799839978888999971868663267789998705


SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Endonuclease III
domain: Endonuclease III
species: Escherichia coli [TaxId: 562]