HHSEARCH alignment of GI: 254780553 and SCOP domain: d2axtu1

Alignment
>d2axtu1 a.60.12.2 (U:37-134) Photosystem II 12 kDa extrinsic protein PsbU {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=91.93  E-value=0.032  Score=32.47  Aligned_cols=24  Identities=21%  Similarity=0.195  Sum_probs=20.7

Q ss_pred             HHCCCHHHHHHCCCCCHHHHHHHH
Q ss_conf             851566875104571167999999
Q gi|254780553|r  102 IILQNSKVIAQIPGISMKIASRIM  125 (207)
Q Consensus       102 I~~~D~~~L~~vpGIGkKtA~rIi  125 (207)
                      |.+.+...|.++||||+++|+||+
T Consensus        21 lN~As~~eL~~lpGIg~~~A~~Iv   44 (98)
T d2axtu1          21 LNNTNIAAFIQYRGLYPTLAKLIV   44 (98)
T ss_dssp             SSSSCGGGGTTSTTCTHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCHHHHHHHH
T ss_conf             634169999873212699999999


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: PsbU/PolX domain-like
family: PsbU-like
domain: Photosystem II 12 kDa extrinsic protein PsbU
species: Thermosynechococcus elongatus [TaxId: 146786]