HHSEARCH alignment of GI: 254780553 and SCOP domain: d2bgwa1

Alignment
>d2bgwa1 a.60.2.5 (A:160-229) DNA repair endonuclease XPF {Aeropyrum pernix [TaxId: 56636]}
Probab=98.13  E-value=9.6e-07  Score=62.57  Aligned_cols=66  Identities=27%  Similarity=0.370  Sum_probs=56.2

Q ss_pred             EECHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             7067799999998501000510112443157899999998515668751045711679999999974222
Q gi|254780553|r   63 FLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKA  132 (207)
Q Consensus        63 F~~~~Er~~F~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~  132 (207)
                      +.+.++..+| .|.++.||||++|-.+++.++.   .+.+.+.+...|.+|||||+++|++|.--++.+.
T Consensus         4 ~~~~~~~~~~-~L~~IpgIG~~~a~~L~~~F~s---~~~l~~As~eeL~~v~GIG~~~A~~I~~~~~~~~   69 (70)
T d2bgwa1           4 LSDVREWQLY-ILQSFPGIGRRTAERILERFGS---LERFFTASKAEISKVEGIGEKRAEEIKKILMTPY   69 (70)
T ss_dssp             CCHHHHHHHH-HHHTSTTCCHHHHHHHHHHHSS---HHHHTTCCHHHHHHSTTCCHHHHHHHHHHHHSCC
T ss_pred             CCCHHHHHHH-HHCCCCCCCHHHHHHHHHHHCC---HHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCC
T ss_conf             5889998999-9808999579999999998298---8999886999997579989999999999984725


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: Hef domain-like
domain: DNA repair endonuclease XPF
species: Aeropyrum pernix [TaxId: 56636]