RPSBLAST alignment of GI: 254780553 and protein with PDBid: 1cuk

>1cuk_A RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli} SCOP: a.5.1.1 a.60.2.1 b.40.4.2 PDB: 1hjp_A 1bdx_A* 1c7y_A 1d8l_A Length = 203
 Score =  190 bits (484), Expect = 2e-49
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 3/204 (1%)

Query: 1   MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60
           MIG+++G I       VLI+V GV Y ++ P+     L + G    +F    +R+D   L
Sbjct: 1   MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60

Query: 61  FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120
           +GF +  +R  F  L    GVG ++A+ +LS ++A + V ++  +    + ++PGI  K 
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120

Query: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180
           A R++ E+K +   L   +    + +        +       A++ LV LGY   +A+  
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVARLVALGYKPQEASRM 180

Query: 181 VVSVLKKEKNIADDSQIIRLALRA 204
           V  + + +   A    +IR ALRA
Sbjct: 181 VSKIARPD---ASSETLIREALRA 201