RPSBLAST alignment of GI: 254780553 and protein with PDBid: 1cuk
>1cuk_A RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli} SCOP: a.5.1.1 a.60.2.1 b.40.4.2 PDB: 1hjp_A 1bdx_A* 1c7y_A 1d8l_A Length = 203
Score = 190 bits (484), Expect = 2e-49
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60
MIG+++G I VLI+V GV Y ++ P+ L + G +F +R+D L
Sbjct: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60
Query: 61 FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120
+GF + +R F L GVG ++A+ +LS ++A + V ++ + + ++PGI K
Sbjct: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120
Query: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180
A R++ E+K + L + + + + A++ LV LGY +A+
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVARLVALGYKPQEASRM 180
Query: 181 VVSVLKKEKNIADDSQIIRLALRA 204
V + + + A +IR ALRA
Sbjct: 181 VSKIARPD---ASSETLIREALRA 201