RPSBLAST alignment of GI: 254780553 and protein with PDBid: 1ixr

>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus} SCOP: a.60.2.1 b.40.4.2 Length = 191

 Score =  157 bits (397), Expect = 2e-39
 Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 1   MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60
           MI  ++G +        ++   GV + +  P   L  L + G    +     ++++ + L
Sbjct: 1   MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQAL-EEGKEVGVHTHLLLKEEGLSL 59

Query: 61  FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120
           +GF  + +   F LL SV GVG +VA+ +LS +    L  +++  +++++    G+  ++
Sbjct: 60  YGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRL 119

Query: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180
           A RI  ELKGK        ++  S   +E             A+ AL  LG+ + QA   
Sbjct: 120 AERIALELKGKVPPHLLAGEKVESEAAEE-------------AVMALAALGFKEAQARAV 166

Query: 181 VVSVLKKEKNIADDSQIIRLALRAI 205
           V+ +L +    A    +I+ AL+ +
Sbjct: 167 VLDLLAQNPK-ARAQDLIKEALKRL 190