HHsearch alignment for GI: 254780554 and conserved domain: COG2183
>COG2183 Tex Transcriptional accessory protein [Transcription].
Probab=95.24 E-value=0.079 Score=32.23 Aligned_cols=58 Identities=29% Similarity=0.491 Sum_probs=34.8
Q ss_pred EEEEECCCCCEEE--EEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 6999978887205--8999971996899983368738899988899999998999862279627788
Q gi|254780554|r 6 RIIGIDPGLRRTG--WGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAV 70 (169)
Q Consensus 6 rILGIDPGl~~tG--~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vai 70 (169)
T Consensus 331 ~~lglDPg~-rtG~k~Avvd~tG---k~l~~~~Iyp~~p~~~~---~~~~~~l~~l~~~~~Ve~iaI 390 (780)
T COG2183 331 ATLGLDPGF-RTGCKVAVVDDTG---KLLDTATIYPHPPVNQS---DKAEATLKDLIRKYKVELIAI 390 (780)
T ss_pred CEEECCCCC-CCCCEEEEECCCC---CEECEEEEECCCCCCCH---HHHHHHHHHHHHHHCCEEEEE
T ss_conf 012048763-0130799983788---55531699727975415---789999999999837107987