HHsearch alignment for GI: 254780554 and conserved domain: PRK00039
>PRK00039 ruvC Holliday junction resolvase; Reviewed.
Probab=100.00 E-value=0 Score=396.02 Aligned_cols=161 Identities=51% Similarity=0.804 Sum_probs=155.2
Q ss_pred CCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH
Q ss_conf 80699997888720589999719968999833687388999888999999989998622796277885033202412478
Q gi|254780554|r 4 SIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNKDAVATL 83 (169)
Q Consensus 4 ~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~n~~t~~ 83 (169)
T Consensus 1 mMrILGIDPGl~~tG~gvie~~~~~~~~i~~G~I~t~~~~~~~~RL~~I~~~l~~li~~~~P~~~AiE~~F~~kN~~tai 80 (169)
T PRK00039 1 MMRILGIDPGLRRTGYGVIEVEGRKLSYVASGVIRTTSDDDLPERLKQIFDGLSEVIDQYQPDEAAIEQVFVNKNPQSTL 80 (169)
T ss_pred CCEEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHH
T ss_conf 95899988366860899999769968999988995799999899999999999999996599656453788733688999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf 8999999999999860161775260677765316888899999999999628899-999556789999999764168756
Q gi|254780554|r 84 KLGQARAIAILSPALARIPVSEYAPNTIKKAVIGVGHGDKKQIHMMLKMLMPESF-FKGKDAADALAIAVCHAYHANSGY 162 (169)
Q Consensus 84 ~lg~arGvi~l~~~~~~i~v~ey~P~~vKkavtG~G~A~KeqV~~mV~~ll~~~~-~~~~D~aDAlAiAl~h~~~~~~~~ 162 (169)
T Consensus 81 ~lgqARGvillaa~~~~i~v~eysP~~VK~aitG~G~A~K~QV~~MV~~~L~l~~~p~p~D~aDAlAiAicH~~~~~~~~ 160 (169)
T PRK00039 81 KLGQARGVAILAAARRGLPVAEYTPLQVKKAVVGYGRADKEQVQHMVKRLLNLPAKPKPADAADALAIAICHAHRRQSLA 160 (169)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999838975888707445533189977899999999998299989997548999999999996776799
Q ss_pred HH
Q ss_conf 86
Q gi|254780554|r 163 YK 164 (169)
Q Consensus 163 ~~ 164 (169)
T Consensus 161 ~~ 162 (169)
T PRK00039 161 GL 162 (169)
T ss_pred HH
T ss_conf 98