HHsearch alignment for GI: 254780554 and conserved domain: PTZ00340
>PTZ00340 O-sialoglycoprotein endopeptidase; Provisional.
Probab=91.07 E-value=1.4 Score=24.47 Aligned_cols=94 Identities=18% Similarity=0.189 Sum_probs=47.4
Q ss_pred CCCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCH-------H--HHHHHHHHHHHHHHHCCC-----CCEE
Q ss_conf 8806999978887205899997199689998336873889998-------8--899999998999862279-----6277
Q gi|254780554|r 3 KSIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSL-------A--FRLCQLYEGLTDVIKNWR-----PEEA 68 (169)
Q Consensus 3 ~~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~-------~--~Rl~~I~~~l~~ii~~~~-----Pd~v 68 (169)
T Consensus 6 k~mliLgIETSCDdTsvAiv~~~~~---il-~~~~~s~~~~~~gGVvPe~Asr~H~~~i~~lv~~aL~~a~i~~~did~I 81 (348)
T PTZ00340 6 KRFLALGIEGSANKIGVGIVDGDGE---VL-SNVRETYITPPGEGFLPRETAQHHRQHILSLVQEALEEAGITLSDISLI 81 (348)
T ss_pred CCCEEEEEECCCCCCEEEEEECCCE---EE-EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEE
T ss_conf 1377999985550106899979891---88-8652105668889858299999999999999999999859984118579
Q ss_pred EEEHHHHCCCHH--HHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 885033202412--478899999999999986016177526
Q gi|254780554|r 69 AVEQVFVNKDAV--ATLKLGQARAIAILSPALARIPVSEYA 107 (169)
Q Consensus 69 aiE~~F~~~n~~--t~~~lg~arGvi~l~~~~~~i~v~ey~ 107 (169)
T Consensus 82 AvT-----~gPGL~g~L~VG~~~--AK~La~~~~~Pli~Vn 115 (348)
T PTZ00340 82 CYT-----KGPGMGAPLAVGATV--AKTLSLLWGKPLVGVN 115 (348)
T ss_pred EEC-----CCCCCHHHHHHHHHH--HHHHHHHCCCCEEECC
T ss_conf 972-----799851658999999--9999998099835213