HHsearch alignment for GI: 254780554 and conserved domain: TIGR01865
>TIGR01865 cas_Csn1 CRISPR-associated protein, Csn1 family; InterPro: IPR010145 CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins found only in CRISPR-containing species, near other CRISPR-associated proteins (cas). The species range so far for these proteins is pathogenic bacteria only..
Probab=96.24 E-value=0.0032 Score=40.82 Aligned_cols=30 Identities=27% Similarity=0.645 Sum_probs=25.9
Q ss_pred EEEEECCCCCEEEEEEEEEECC---EEEEEEEE
Q ss_conf 6999978887205899997199---68999833
Q gi|254780554|r 6 RIIGIDPGLRRTGWGIVDVAGD---NLCFVSSG 35 (169)
Q Consensus 6 rILGIDPGl~~tG~avie~~~~---~~~li~~g 35 (169)
T Consensus 2 y~lGLDiGi~SVGWA~~e~d~~~~~~~~~id~g 34 (1140)
T TIGR01865 2 YILGLDIGIASVGWAVVEDDYKVEAKKRLIDGG 34 (1140)
T ss_pred CEEEEEECCCCEEEEEEECCCCCCCCCCEEECC
T ss_conf 348887020123405775464740124144048