HHsearch alignment for GI: 254780554 and conserved domain: pfam07066
>pfam07066 Phage_Lacto_M3 Lactococcus phage M3 protein. This family consists of several Lactococcus phage middle-3 (M3) proteins of around 160 residues in length. The function of this family is unknown.
Probab=97.50 E-value=8.4e-05 Score=50.53 Aligned_cols=142 Identities=18% Similarity=0.174 Sum_probs=90.6
Q ss_pred EEEEECCCCCE-----EEEEEEEEECCEEEEEEEEEEEC-CCCCCHHHHHHHHHHHHHHHHHCCCCC--EEEEEHHHHCC
Q ss_conf 69999788872-----05899997199689998336873-889998889999999899986227962--77885033202
Q gi|254780554|r 6 RIIGIDPGLRR-----TGWGIVDVAGDNLCFVSSGTIVS-CVRQSLAFRLCQLYEGLTDVIKNWRPE--EAAVEQVFVNK 77 (169)
Q Consensus 6 rILGIDPGl~~-----tG~avie~~~~~~~li~~g~I~t-~~~~~~~~Rl~~I~~~l~~ii~~~~Pd--~vaiE~~F~~~ 77 (169)
T Consensus 3 k~laidfstankkgegtgyafr~pl~~e---~~vgsika~~~kk~~~era~~i~d~i~diid~fdl~~y~i~ie~pii~~ 79 (162)
T pfam07066 3 KALAIDFSTANKKGEGTGYAFRKPLDGE---VVVGSIKAGGKKKDALERAFDIADAIKDIIDEFDLFDYFIAIEEPIIGF 79 (162)
T ss_pred CEEEEEEECCCCCCCCCCEEEECCCCCC---EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCEEEC
T ss_conf 1388863125667876523760478886---8999874078566889999989999999987632233215641634310
Q ss_pred CHHHHHHHHHHHHHHHHHH-HHCCCCEEEECHHHHHHH--HCCCCCCCHHHHHHHHHHHCCC-CCCCCCCHHHHHHH
Q ss_conf 4124788999999999999-860161775260677765--3168888999999999996288-99999556789999
Q gi|254780554|r 78 DAVATLKLGQARAIAILSP-ALARIPVSEYAPNTIKKA--VIGVGHGDKKQIHMMLKMLMPE-SFFKGKDAADALAI 150 (169)
Q Consensus 78 n~~t~~~lg~arGvi~l~~-~~~~i~v~ey~P~~vKka--vtG~G~A~KeqV~~mV~~ll~~-~~~~~~D~aDAlAi 150 (169)
T Consensus 80 ~~k~nisl~~~ng~fig~i~~~~nigy~~i~nskwc~yhli~gk~~~rk~esieilka~~iv~~n~~dddiadaf~i 156 (162)
T pfam07066 80 KRKGNISLANANGSFIGAIDGLHNIGYTDIDNSKWCGYHLIKGKRALRKEESIEILKATGIVDDNCIDDDIADAFCI 156 (162)
T ss_pred CCCCCEEEEECCCEEEEEECCCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHE
T ss_conf 24685778805865775442642246266256532521454260666456768999982997722246115655230