HHsearch alignment of GI: 254780554 and MMDB domain: 1nu0_A_
>1nu0_A (A:) Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli}
Probab=98.15 E-value=2e-05 Score=53.99 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH
Q ss_conf 80699997888720589999719968999833687388999888999999989998622796277885033202412478
Q gi|254780554|r 4 SIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNKDAVATL 83 (169)
Q Consensus 4 ~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~n~~t~~ 83 (169)
+-||||||||..+||+|+.|..+.-.. ..+++..+..... .+.|.+++.+|+|+.++|--|.-..+..+.
T Consensus 2 ~krilgiD~G~kriGiAi~d~~~~ia~--p~~~i~~~~~~~~-------~~~l~~li~~~~~~~iViGlP~~~~g~~~~- 71 (138)
T 1nu0_A 2 SGTLXAFDFGTKSIGVAVGQRITGTAR--PLPAIKAQDGTPD-------WNIIERLLKEWQPDEIIVGLPLNXDGTEQP- 71 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEE--EEEEEEEETTEEC-------HHHHHHHHHHHCCSEEEEEEEECTTSCBCH-
T ss_pred CCCEEEEEECCCEEEEEEECCCCCCCC--CEEEEECCCCCHH-------HHHHHHHHHHCCCCEEEECCCCCCCCCCCH-
T ss_conf 976899991799799999479987401--4078981677268-------999999864248738996443477787578-
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 89999999999998601617752
Q gi|254780554|r 84 KLGQARAIAILSPALARIPVSEY 106 (169)
Q Consensus 84 ~lg~arGvi~l~~~~~~i~v~ey 106 (169)
.-..++--+-......++||+.+
T Consensus 72 ~a~~v~~f~~~L~~~~~l~v~~v 94 (138)
T 1nu0_A 72 LTARARKFANRIHGRFGVEVKLH 94 (138)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999999998629996997