HHsearch results for GI: 254780554 and protein with PDBid: 1iv0_A
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=97.66 E-value=5e-05 Score=50.59 Aligned_cols=88 Identities=18% Similarity=0.140 Sum_probs=54.9
Q ss_pred CEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC---CHHH
Q ss_conf 0699997888720589999719968999833687388999888999999989998622796277885033202---4124
Q gi|254780554|r 5 IRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNK---DAVA 81 (169)
Q Consensus 5 MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~---n~~t 81 (169)
|||||||.|..++|.|+-|..+.-... .++|... + .....+.|.+++++|+|+.++|=-|.--. +.++
T Consensus 1 MriLglD~G~kriGvAisd~~~~~A~p--l~~i~~~---~----~~~~~~~l~~li~e~~i~~iVvGlP~~~dG~~~~~~ 71 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPLASG--RGYLVRK---T----LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQA 71 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCCC--EEEEECC---C----HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCS
T ss_pred CCEEEEEECCCEEEEEEECCCCCEEEC--EEEEECC---C----CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
T ss_conf 929999808998999992599987817--7889825---8----568999999999971857499158977899919899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 7889999999999998601617752
Q gi|254780554|r 82 TLKLGQARAIAILSPALARIPVSEY 106 (169)
Q Consensus 82 ~~~lg~arGvi~l~~~~~~i~v~ey 106 (169)
. .+ +--+-. +...++||..+
T Consensus 72 ~-~v---~~f~~~-L~~~~~pv~~~ 91 (98)
T 1iv0_A 72 G-KV---LPLVEA-LRARGVEVELW 91 (98)
T ss_dssp S-TT---HHHHHH-HHHTTCEEEEE
T ss_pred H-HH---HHHHHH-HHHCCCCEEEE
T ss_conf 9-99---999999-86379999998