HHsearch results for GI: 254780554 and protein with PDBid: 1kcf_A
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=98.28 E-value=5.5e-05 Score=50.32 Aligned_cols=153 Identities=12% Similarity=0.104 Sum_probs=87.6
Q ss_pred CCCCEEEEECCCCCEEEEEEEEEECC-EEEEEEEEEEECCCC----------CCHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98806999978887205899997199-689998336873889----------9988899999998999862279627788
Q gi|254780554|r 2 RKSIRIIGIDPGLRRTGWGIVDVAGD-NLCFVSSGTIVSCVR----------QSLAFRLCQLYEGLTDVIKNWRPEEAAV 70 (169)
Q Consensus 2 ~~~MrILGIDPGl~~tG~avie~~~~-~~~li~~g~I~t~~~----------~~~~~Rl~~I~~~l~~ii~~~~Pd~vai 70 (169)
+..+|||+||.|+.+..|++++...+ ...+.++.++..... .+...-...++.-++.++..++||.|.|
T Consensus 37 ~~~~rILSIDvGIKNLAyc~l~~~~~~~~~I~~W~~i~L~~~~~~~~~~~~~~~~~~~~~~~~~li~~l~~~~~~d~vlI 116 (258)
T 1kcf_A 37 YPTSRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILM 116 (258)
T ss_dssp CCCSSEEEEEECSTTEEEEEEEECTTSCEEEEEEEEECTTSCCTTCCCCCCCCSHHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 89982789982743001235612789875578754621255667553135567879999999999998640047998997
Q ss_pred EHHHHCCCHHH----HHHHHHHHHHHHHHHHHC---------CC-CEEEECHHHHHHHHCC--------CCCCCH-HHHH
Q ss_conf 50332024124----788999999999999860---------16-1775260677765316--------888899-9999
Q gi|254780554|r 71 EQVFVNKDAVA----TLKLGQARAIAILSPALA---------RI-PVSEYAPNTIKKAVIG--------VGHGDK-KQIH 127 (169)
Q Consensus 71 E~~F~~~n~~t----~~~lg~arGvi~l~~~~~---------~i-~v~ey~P~~vKkavtG--------~G~A~K-eqV~ 127 (169)
|.+-+..+..+ ++++....+.+....... .. -|....|..+.++-.. ..+-.+ +-+.
T Consensus 117 E~Qr~Rs~~~~v~~~~lr~~~le~mL~a~~~~~~~~~~~~~~~~~~v~~~~p~~v~~y~~~~~~~~~~~~~Kk~~i~l~~ 196 (258)
T 1kcf_A 117 ERQRYRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVK 196 (258)
T ss_dssp EECCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCEEEECCHHHHHHHHHHHHC-------CCCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 87766567752137889999999999999998613432334664358875756667874234565443420199999999
Q ss_pred HHHHH-------------HC--CCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999-------------62--88999995567899999997
Q gi|254780554|r 128 MMLKM-------------LM--PESFFKGKDAADALAIAVCH 154 (169)
Q Consensus 128 ~mV~~-------------ll--~~~~~~~~D~aDAlAiAl~h 154 (169)
..+.. .. -....|-||.||++=-|+.-
T Consensus 197 ~~L~~~~~~~~~~~~~~~~~~~f~~~kKkDDLADslLQ~la~ 238 (258)
T 1kcf_A 197 ELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGW 238 (258)
T ss_dssp HHHHTTSEEESSHHHHHHHHHCCSTTTHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 998425334677167888987447777634678799999999