HHsearch results for GI: 254780554 and protein with PDBid: 1kcf_A

>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=98.28  E-value=5.5e-05  Score=50.32  Aligned_cols=153  Identities=12%  Similarity=0.104  Sum_probs=87.6

Q ss_pred             CCCCEEEEECCCCCEEEEEEEEEECC-EEEEEEEEEEECCCC----------CCHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf             98806999978887205899997199-689998336873889----------9988899999998999862279627788
Q gi|254780554|r    2 RKSIRIIGIDPGLRRTGWGIVDVAGD-NLCFVSSGTIVSCVR----------QSLAFRLCQLYEGLTDVIKNWRPEEAAV   70 (169)
Q Consensus         2 ~~~MrILGIDPGl~~tG~avie~~~~-~~~li~~g~I~t~~~----------~~~~~Rl~~I~~~l~~ii~~~~Pd~vai   70 (169)
                      +..+|||+||.|+.+..|++++...+ ...+.++.++.....          .+...-...++.-++.++..++||.|.|
T Consensus        37 ~~~~rILSIDvGIKNLAyc~l~~~~~~~~~I~~W~~i~L~~~~~~~~~~~~~~~~~~~~~~~~~li~~l~~~~~~d~vlI  116 (258)
T 1kcf_A           37 YPTSRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILM  116 (258)
T ss_dssp             CCCSSEEEEEECSTTEEEEEEEECTTSCEEEEEEEEECTTSCCTTCCCCCCCCSHHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred             CCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             89982789982743001235612789875578754621255667553135567879999999999998640047998997


Q ss_pred             EHHHHCCCHHH----HHHHHHHHHHHHHHHHHC---------CC-CEEEECHHHHHHHHCC--------CCCCCH-HHHH
Q ss_conf             50332024124----788999999999999860---------16-1775260677765316--------888899-9999
Q gi|254780554|r   71 EQVFVNKDAVA----TLKLGQARAIAILSPALA---------RI-PVSEYAPNTIKKAVIG--------VGHGDK-KQIH  127 (169)
Q Consensus        71 E~~F~~~n~~t----~~~lg~arGvi~l~~~~~---------~i-~v~ey~P~~vKkavtG--------~G~A~K-eqV~  127 (169)
                      |.+-+..+..+    ++++....+.+.......         .. -|....|..+.++-..        ..+-.+ +-+.
T Consensus       117 E~Qr~Rs~~~~v~~~~lr~~~le~mL~a~~~~~~~~~~~~~~~~~~v~~~~p~~v~~y~~~~~~~~~~~~~Kk~~i~l~~  196 (258)
T 1kcf_A          117 ERQRYRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVK  196 (258)
T ss_dssp             EECCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCEEEECCHHHHHHHHHHHHC-------CCCHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf             87766567752137889999999999999998613432334664358875756667874234565443420199999999


Q ss_pred             HHHHH-------------HC--CCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999-------------62--88999995567899999997
Q gi|254780554|r  128 MMLKM-------------LM--PESFFKGKDAADALAIAVCH  154 (169)
Q Consensus       128 ~mV~~-------------ll--~~~~~~~~D~aDAlAiAl~h  154 (169)
                      ..+..             ..  -....|-||.||++=-|+.-
T Consensus       197 ~~L~~~~~~~~~~~~~~~~~~~f~~~kKkDDLADslLQ~la~  238 (258)
T 1kcf_A          197 ELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGW  238 (258)
T ss_dssp             HHHHTTSEEESSHHHHHHHHHCCSTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             998425334677167888987447777634678799999999