HHsearch results for GI: 254780554 and protein with PDBid: 1nu0_A

>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=98.01  E-value=3.6e-05  Score=51.46  Aligned_cols=104  Identities=14%  Similarity=0.129  Sum_probs=64.5

Q ss_pred             CCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH
Q ss_conf             80699997888720589999719968999833687388999888999999989998622796277885033202412478
Q gi|254780554|r    4 SIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNKDAVATL   83 (169)
Q Consensus         4 ~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~n~~t~~   83 (169)
                      +-||||||+|+.++|+||-|..+.-...  .+++..+....       ..+.|.+++++|+|+.++|--|+-..+..+..
T Consensus         2 ~griLgiD~G~kriGlAisd~~~~~a~p--l~~i~~~~~~~-------~~~~l~~~i~e~~~~~iVvG~P~~~~g~~~~~   72 (138)
T 1nu0_A            2 SGTLMAFDFGTKSIGVAVGQRITGTARP--LPAIKAQDGTP-------DWNIIERLLKEWQPDEIIVGLPLNMDGTEQPL   72 (138)
T ss_dssp             CCEEEEEECCSSEEEEEEEETTTTEEEE--EEEEEEETTEE-------CHHHHHHHHHHHCCSEEEEEEEECTTSCBCHH
T ss_pred             CCCEEEEEECCCEEEEEEECCCCCCEEC--CEEEECCCCHH-------HHHHHHHHHHHCCCCEEEECCCCCCCCCCCHH
T ss_conf             9768999937887999994799884304--18898277468-------99999998630487299955545778984889


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEE----CHHHHHHHHCC
Q ss_conf             89999999999998601617752----60677765316
Q gi|254780554|r   84 KLGQARAIAILSPALARIPVSEY----APNTIKKAVIG  117 (169)
Q Consensus        84 ~lg~arGvi~l~~~~~~i~v~ey----~P~~vKkavtG  117 (169)
                       .-+++--+-....+.++||+.+    +..+.+....-
T Consensus        73 -~~~v~~F~~~L~~~~~i~v~~~DErlTS~eA~~~l~~  109 (138)
T 1nu0_A           73 -TARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE  109 (138)
T ss_dssp             -HHHHHHHHHHHHHHHCCCEEEEEEECCCCCC------
T ss_pred             -HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
T ss_conf             -9999999999998509987996076449999999997