HHSEARCH alignment of GI: 254780554 and SCOP domain: d1huxa_

Alignment

Probab=94.85  E-value=0.023  Score=32.71  Aligned_cols=51  Identities=20%  Similarity=0.180  Sum_probs=32.0

Q ss_pred             CCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             80699997888720589999719968999833687388999888999999989998
Q gi|254780554|r    4 SIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDV   59 (169)
Q Consensus         4 ~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~i   59 (169)
                      +|.+||||-|.+.|=++++|.+++   ++....+.|....  .+-+..|.+.+.++
T Consensus         1 ~M~~lGIDiGGT~~k~~vvd~~g~---il~~~~~~t~~~~--~~~~~~i~~~l~~~   51 (259)
T d1huxa_           1 SIYTLGIDVGSTASKCIILKDGKE---IVAKSLVAVGTGT--SGPARSISEVLENA   51 (259)
T ss_dssp             CCEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCSSC--CHHHHHHHHHHHHH
T ss_pred             CCEEEEEEECCCEEEEEEECCCCC---EEEEEEECCCCCH--HHHHHHHHHHHHHC
T ss_conf             958999991721299999908990---9999995689997--99999999999972

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Hydroxyglutaryl-CoA dehydratase component A
species: Acidaminococcus fermentans [TaxId: 905]