HHSEARCH alignment of GI: 254780554 and SCOP domain: d1okja1

Alignment
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=95.50  E-value=0.038  Score=31.35  Aligned_cols=94  Identities=12%  Similarity=0.212  Sum_probs=52.8

Q ss_pred             EEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC--CHHHHH
Q ss_conf             699997888720589999719968999833687388999888999999989998622796277885033202--412478
Q gi|254780554|r    6 RIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNK--DAVATL   83 (169)
Q Consensus         6 rILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~--n~~t~~   83 (169)
                      |||+||-+...+++|+++  +++.  +..  .... ...+.+.   |...+.+++++.+-+.--+..+++++  ..-|.+
T Consensus         1 kiLaIdTS~~~~sval~~--~~~i--~~~--~~~~-~~~h~~~---l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfTgl   70 (106)
T d1okja1           1 RILAIDTATEACSVALWN--DGTV--NAH--FELC-PREHTQR---ILPMVQDILTTSGTSLTDINALAYGRGPGSFTGV   70 (106)
T ss_dssp             EEEEEECSSSEEEEEEEE--TTEE--EEE--EEEC-CSSTTTT---HHHHHHHHHHHTTCCGGGCCEEEEEEESSCHHHH
T ss_pred             CEEEEECCCCCEEEEEEE--CCEE--EEE--EEEC-CHHHHHH---HHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCC
T ss_conf             999999777132999999--9999--999--9975-5899999---9999999998608750025678885036765420


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEECHHHH
Q ss_conf             8999999999999860161775260677
Q gi|254780554|r   84 KLGQARAIAILSPALARIPVSEYAPNTI  111 (169)
Q Consensus        84 ~lg~arGvi~l~~~~~~i~v~ey~P~~v  111 (169)
                      .+|.+-+-.+  +.-.++|++.++..+.
T Consensus        71 Rig~s~akgl--a~~~~ip~~~v~sl~~   96 (106)
T d1okja1          71 RIGIGIAQGL--ALGAELPMIGVSTLMT   96 (106)
T ss_dssp             HHHHHHHHHH--HHHTTCCEEEEEHHHH
T ss_pred             HHHHHHHHHH--HHHCCCCEEEECHHHH
T ss_conf             5999999999--9982999998687999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein YeaZ
species: Escherichia coli [TaxId: 562]