HHSEARCH alignment of GI: 254780554 and SCOP domain: d1vhxa_

Alignment
>d1vhxa_ c.55.3.8 (A:) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}
Probab=98.38  E-value=9.1e-07  Score=59.85  Aligned_cols=109  Identities=18%  Similarity=0.192  Sum_probs=67.3

Q ss_pred             CCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH
Q ss_conf             80699997888720589999719968999833687388999888999999989998622796277885033202412478
Q gi|254780554|r    4 SIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNKDAVATL   83 (169)
Q Consensus         4 ~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~n~~t~~   83 (169)
                      +|||||||+|..++|+|+-|..+.-...  .++|..+....     ......|.+++++|+|+.++|=-|+--.+..+. 
T Consensus         1 ~mriLgiD~G~kriGvAisd~~~~~a~p--l~~i~~~~~~~-----~~~~~~l~~ii~e~~i~~iViGlP~~~dg~~~~-   72 (140)
T d1vhxa_           1 SLRILGLDLGTKTLGVALSDEMGWTAQG--IETIKINEAEG-----DYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGP-   72 (140)
T ss_dssp             CEEEEEEEECSSEEEEEEECTTSSSEEE--EEEEECBGGGT-----BCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCH-
T ss_pred             CCEEEEEEECCCEEEEEEECCCCCCCCC--EEEEEECCCCC-----CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH-
T ss_conf             9519999827998999994599882255--16686125664-----168999999998516565998355224786136-


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEE----CHHHHHHHHCCCCC
Q ss_conf             89999999999998601617752----60677765316888
Q gi|254780554|r   84 KLGQARAIAILSPALARIPVSEY----APNTIKKAVIGVGH  120 (169)
Q Consensus        84 ~lg~arGvi~l~~~~~~i~v~ey----~P~~vKkavtG~G~  120 (169)
                      ...+++-.+-......++||+.+    +..+.++..-..|.
T Consensus        73 ~~~~~~~f~~~l~~~~~i~V~~~DEr~TS~~A~~~l~~~~~  113 (140)
T d1vhxa_          73 RGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLIAADV  113 (140)
T ss_dssp             HHHHHHHHHHHHHHHHCSCEEEECCSSCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf             77888999998346778557984144379999999997699


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Putative Holliday junction resolvase RuvX
domain: Hypothetical protein YrrK (RuvX)
species: Bacillus subtilis [TaxId: 1423]