RPSBLAST alignment of GI: 254780554 and protein with PDBid: 1hjr
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6 Length = 158
Score = 158 bits (400), Expect = 7e-40
Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 7 IIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPE 66
I+GIDPG R TG+G++ G L ++ SG I L RL +Y G+T++I ++P+
Sbjct: 3 ILGIDPGSRVTGYGVIRQVGRQLSYLGSGCI-RTKVDDLPSRLKLIYAGVTEIITQFQPD 61
Query: 67 EAAVEQVFVNKDAVATLKLGQARAIAILSPALARIPVSEYAPNTIKKAVIGVGHGDKKQI 126
A+EQVF+ K+A + LKLGQAR +AI++ +PV EYA +K+ V+G+G +K Q+
Sbjct: 62 YFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQV 121
Query: 127 HMMLKMLMPESFFKGKDAADALAIAVCHAYHANS 160
M++ L+ DAADALAIA+ H + + +
Sbjct: 122 QHMVRTLLKLPANPQADAADALAIAITHCHVSQN 155