BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780555|ref|YP_003064968.1| hypothetical protein
CLIBASIA_02210 [Candidatus Liberibacter asiaticus str. psy62]
(41 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780555|ref|YP_003064968.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040232|gb|ACT57028.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 41
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT
Sbjct: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
>gi|254780125|ref|YP_003064538.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039802|gb|ACT56598.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|317120696|gb|ADV02519.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC1]
gi|317120739|gb|ADV02561.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC2]
gi|317120800|gb|ADV02621.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC2]
gi|317120840|gb|ADV02661.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC1]
Length = 262
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS + PF E N IR +VD+D N WF+ KDVA L +
Sbjct: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY 37
>gi|53803190|ref|YP_115046.1| hypothetical protein MCA2642 [Methylococcus capsulatus str. Bath]
gi|53756951|gb|AAU91242.1| conserved domain protein [Methylococcus capsulatus str. Bath]
Length = 252
Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+++IPF+ E P+R+V D G WF+ DVA L++
Sbjct: 3 TELIPFDFEGRPVRVVTDAQGEPWFVAADVAQSLEY 38
>gi|315122913|ref|YP_004063402.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496315|gb|ADR52914.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 261
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS++IPF E N IR VVD+D F+ KD+A L +
Sbjct: 1 MSNIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGY 37
>gi|315121946|ref|YP_004062435.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495348|gb|ADR51947.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 262
Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS +IPF E N IR VVD+D F+ KD+A L +
Sbjct: 1 MSSIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGY 37
>gi|255020306|ref|ZP_05292374.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
gi|254970226|gb|EET27720.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
Length = 257
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+++IPF+ E P+R+V D G WF+ DV L+ + T
Sbjct: 3 TELIPFDFEGRPVRVVTDAQGEPWFVAADVCAVLELPNTT 42
>gi|9107730|gb|AAF85322.1|AE004059_12 phage-related protein [Xylella fastidiosa 9a5c]
Length = 530
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 199
>gi|77747608|ref|NP_299802.2| hypothetical protein XF2524 [Xylella fastidiosa 9a5c]
Length = 504
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 173
>gi|15837286|ref|NP_297974.1| hypothetical protein XF0684 [Xylella fastidiosa 9a5c]
gi|9105566|gb|AAF83494.1|AE003912_6 phage-related protein [Xylella fastidiosa 9a5c]
Length = 503
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 173
>gi|28199601|ref|NP_779915.1| hypothetical protein PD1726 [Xylella fastidiosa Temecula1]
gi|77747679|ref|NP_779339.2| hypothetical protein PD1133 [Xylella fastidiosa Temecula1]
gi|28057716|gb|AAO29564.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 503
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 173
>gi|182681747|ref|YP_001829907.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182682342|ref|YP_001830502.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057123|gb|AAO28988.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631857|gb|ACB92633.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182632452|gb|ACB93228.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307578623|gb|ADN62592.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
gi|307580176|gb|ADN64145.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 535
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 167 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 205
>gi|71276718|ref|ZP_00652986.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71276734|ref|ZP_00653001.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900867|ref|ZP_00682983.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71902520|ref|ZP_00684445.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162461|gb|EAO12196.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71162476|gb|EAO12210.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71727755|gb|EAO30023.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729338|gb|EAO31453.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 370
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF+ E +R VVD+ G WF+ KDVA L +T+
Sbjct: 1 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYTN 39
>gi|273810427|ref|YP_003344898.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097802|gb|ACV41108.1| Bro-N family protein [Xylella phage Xfas53]
Length = 431
Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E +R VVD+ G WF+ KDVA L +T+
Sbjct: 180 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTN 218
>gi|71898928|ref|ZP_00681095.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731340|gb|EAO33404.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 387
Score = 40.4 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E +R VVD+ G WF+ KDVA L +T+
Sbjct: 137 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTN 175
>gi|169633393|ref|YP_001707129.1| hypothetical protein ABSDF1750 [Acinetobacter baumannii SDF]
gi|169152185|emb|CAP01089.1| hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 260
Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS+M FN N IR +V +DG WF+ DVA L +
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFIAADVATVLGY 37
>gi|315121965|ref|YP_004062454.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495367|gb|ADR51966.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 263
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
++IPF E N IR VVDED F+ KD+A L +
Sbjct: 5 NIIPFEFESNRIRTVVDEDNTILFVAKDIAEALGY 39
>gi|315122933|ref|YP_004063422.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496335|gb|ADR52934.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 264
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
++IPF E N IR VVDED F+ KD+A L +
Sbjct: 5 NIIPFEFESNRIRTVVDEDNTILFVAKDIAEALGY 39
>gi|184157378|ref|YP_001845717.1| prophage antirepressor [Acinetobacter baumannii ACICU]
gi|183208972|gb|ACC56370.1| Prophage antirepressor [Acinetobacter baumannii ACICU]
Length = 250
Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
MS++ FN N IR V+ +DG WF+ DVA L+++
Sbjct: 1 MSNISVFNFNQNEIRTVLKDDGEIWFVASDVATVLEYS 38
>gi|283852564|ref|ZP_06369831.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
gi|283572012|gb|EFC20005.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
Length = 323
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
S+ +PF E + IR V++ DGN WF+ +DV ++ +
Sbjct: 13 SNPVPFAFESHEIRTVINGDGNPWFVARDVCAAMNIS 49
>gi|15838264|ref|NP_298952.1| hypothetical protein XF1663 [Xylella fastidiosa 9a5c]
gi|9106723|gb|AAF84472.1|AE003992_8 phage-related protein [Xylella fastidiosa 9a5c]
Length = 381
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF+ E +R VVD+ G WF+ KDVA L + +
Sbjct: 12 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYAN 50
>gi|71901490|ref|ZP_00683577.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728746|gb|EAO30890.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 412
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L + +
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYAN 199
>gi|330810751|ref|YP_004355213.1| phage regulatory protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378859|gb|AEA70209.1| Putative phage regulatory protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 283
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ +IPF+ + IR++ DE G+ WF+ +DVA L +
Sbjct: 28 NSVIPFDFDGGAIRVITDELGDPWFVARDVADALGY 63
>gi|169634092|ref|YP_001707828.1| hypothetical protein ABSDF2615 [Acinetobacter baumannii SDF]
gi|169152884|emb|CAP01922.1| conserved hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 94
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS+M FN N IR +V +DG WF+ DVA L +
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFVAADVATVLGY 37
>gi|144898901|emb|CAM75765.1| BRO, N-terminal [Magnetospirillum gryphiswaldense MSR-1]
Length = 300
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M++++PF E + IR VVD DG WF+ KDVA L + + T
Sbjct: 1 MTNIVPFEFEGSAIR-VVDIDGAPWFVGKDVAERLGYANAT 40
>gi|108763205|ref|YP_630118.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
gi|108467085|gb|ABF92270.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
Length = 270
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + F+ E + +R+V D G +WF+ KD+A L++
Sbjct: 1 MNQPVAFDFESHHVRVVTDAHGEHWFVAKDIAESLEY 37
>gi|28198899|ref|NP_779213.1| hypothetical protein PD1001 [Xylella fastidiosa Temecula1]
gi|182681602|ref|YP_001829762.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28056997|gb|AAO28862.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631712|gb|ACB92488.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307580036|gb|ADN64005.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 262
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ M PF E + +R VVD+ G WF+ DVA L + +
Sbjct: 12 MNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYAN 50
>gi|258543092|ref|YP_003188525.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256634170|dbj|BAI00146.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256637230|dbj|BAI03199.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-03]
gi|256640282|dbj|BAI06244.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-07]
gi|256643339|dbj|BAI09294.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-22]
gi|256646394|dbj|BAI12342.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-26]
gi|256649447|dbj|BAI15388.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-32]
gi|256652433|dbj|BAI18367.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655491|dbj|BAI21418.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-12]
Length = 234
Score = 38.1 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++IPFN E + +R V+ DG WF++ DV L+ T+
Sbjct: 1 MSNIIPFNFEDHAVR-VITRDGEPWFVLADVCDVLEHTN 38
>gi|312962012|ref|ZP_07776509.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
gi|311283822|gb|EFQ62406.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
Length = 283
Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
S +IPF+ + IR++ D+ G+ WF+ +DVA L ++
Sbjct: 28 SAVIPFDFDGAAIRVITDKLGDPWFVARDVADALGYS 64
>gi|222112392|ref|YP_002554656.1| prophage antirepressor [Acidovorax ebreus TPSY]
gi|221731836|gb|ACM34656.1| prophage antirepressor [Acidovorax ebreus TPSY]
Length = 252
Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
MS +IPF E + +R+ VD+ G WF DV L+
Sbjct: 1 MSAIIPFQFEAHAVRVQVDDQGQPWFNATDVCDALE 36
>gi|71276717|ref|ZP_00652985.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900866|ref|ZP_00682982.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162475|gb|EAO12209.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729337|gb|EAO31452.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 264
Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+IPF+ + +R+V+ DGN WF+ KDV LD+ + +
Sbjct: 5 IIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAATS 41
>gi|71899743|ref|ZP_00681894.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730438|gb|EAO32518.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 203
Score = 37.4 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+IPF+ + +R+V+ DGN WF+ KDV LD+ +
Sbjct: 5 IIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAETS 41
>gi|71899745|ref|ZP_00681896.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730440|gb|EAO32520.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 251
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF+ E + +R VVD+ G WF+ DVA L + +
Sbjct: 1 MNAITPFHFESHAVRTVVDDHGEVWFVGTDVATVLGYAN 39
>gi|170720501|ref|YP_001748189.1| prophage antirepressor [Pseudomonas putida W619]
gi|169758504|gb|ACA71820.1| prophage antirepressor [Pseudomonas putida W619]
Length = 256
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
++IPFN + IR+V D WF+ KD+A L ++
Sbjct: 2 NLIPFNFNGHEIRVVKDHANEPWFVAKDIADDLGYS 37
>gi|292491104|ref|YP_003526543.1| BRO domain protein [Nitrosococcus halophilus Nc4]
gi|291579699|gb|ADE14156.1| BRO domain protein [Nitrosococcus halophilus Nc4]
Length = 316
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
M+D+IPFN + + IR+V+ DG WF+ KD+ L+
Sbjct: 1 MNDLIPFNFDGHDIRVVMI-DGEPWFVAKDLCDVLE 35
>gi|160898695|ref|YP_001564277.1| prophage antirepressor [Delftia acidovorans SPH-1]
gi|160364279|gb|ABX35892.1| prophage antirepressor [Delftia acidovorans SPH-1]
Length = 270
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
MS++ PF + + I ++ ++ G WF+ K+V+G L ++
Sbjct: 1 MSNITPFKFQDHEITVLTNDSGEPWFIAKEVSGVLGYS 38
>gi|310286594|ref|YP_003937852.1| phage anti-repressor protein [Bifidobacterium bifidum S17]
gi|309250530|gb|ADO52278.1| putative phage anti-repressor protein [Bifidobacterium bifidum
S17]
Length = 260
Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+++ PF+ + N +RI+ D+ G WF+ KDV L +
Sbjct: 4 NNLQPFDFKGNQVRILTDKKGEPWFVAKDVCNVLGY 39
>gi|190573874|ref|YP_001971719.1| putative phage-like protein [Stenotrophomonas maltophilia K279a]
gi|190011796|emb|CAQ45416.1| putative phage-related protein [Stenotrophomonas maltophilia
K279a]
Length = 253
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
MS +IPF E + +RI VD G WF DV L+
Sbjct: 1 MSAIIPFQFEAHAVRIQVDGAGLPWFNASDVCNALE 36
>gi|294789953|ref|ZP_06755172.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
gi|294482110|gb|EFG29818.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
Length = 283
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 10 EHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
E++ IR + DE G +WF+ DV G L + +
Sbjct: 23 ENHSIRTIADEKGEFWFLANDVCGVLGYVN 52
>gi|307544693|ref|YP_003897172.1| prophage antirepressor [Halomonas elongata DSM 2581]
gi|307216717|emb|CBV41987.1| prophage antirepressor [Halomonas elongata DSM 2581]
Length = 262
Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M + PFN + +R++ +DG F+ KDVA L +
Sbjct: 1 MQSIQPFNFDSQQVRVIQGDDGEPMFVAKDVAAALGY 37
>gi|323517747|gb|ADX92128.1| prophage antirepressor [Acinetobacter baumannii TCDC-AB0715]
Length = 253
Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M+++ FN +R +V +DG WF++ DV L+ +++
Sbjct: 1 MNNVSVFNFNQKEVRTIVKKDGEIWFVLSDVCNVLEIGNVS 41
Searching..................................................done
Results from round 2
>gi|254780555|ref|YP_003064968.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040232|gb|ACT57028.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 41
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT
Sbjct: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
>gi|254780125|ref|YP_003064538.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039802|gb|ACT56598.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|317120696|gb|ADV02519.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC1]
gi|317120739|gb|ADV02561.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC2]
gi|317120800|gb|ADV02621.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC2]
gi|317120840|gb|ADV02661.1| putative Bro-N family phage antirepressor [Liberibacter phage
SC1]
Length = 262
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS + PF E N IR +VD+D N WF+ KDVA L +
Sbjct: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY 37
>gi|315122913|ref|YP_004063402.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496315|gb|ADR52914.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 261
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS++IPF E N IR VVD+D F+ KD+A L +
Sbjct: 1 MSNIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGY 37
>gi|315121946|ref|YP_004062435.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495348|gb|ADR51947.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 262
Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS +IPF E N IR VVD+D F+ KD+A L +
Sbjct: 1 MSSIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGY 37
>gi|315121965|ref|YP_004062454.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495367|gb|ADR51966.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 263
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
++IPF E N IR VVDED F+ KD+A L +
Sbjct: 5 NIIPFEFESNRIRTVVDEDNTILFVAKDIAEALGY 39
>gi|315122933|ref|YP_004063422.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496335|gb|ADR52934.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 264
Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
++IPF E N IR VVDED F+ KD+A L +
Sbjct: 5 NIIPFEFESNRIRTVVDEDNTILFVAKDIAEALGY 39
>gi|9107730|gb|AAF85322.1|AE004059_12 phage-related protein [Xylella fastidiosa 9a5c]
Length = 530
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 199
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 281 ITPFQFESKDVRIQLDEASAPWFNANDVCAVLEF 314
>gi|77747608|ref|NP_299802.2| hypothetical protein XF2524 [Xylella fastidiosa 9a5c]
Length = 504
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 173
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 255 ITPFQFESKDVRIQLDEASAPWFNANDVCAVLEF 288
>gi|15837286|ref|NP_297974.1| hypothetical protein XF0684 [Xylella fastidiosa 9a5c]
gi|9105566|gb|AAF83494.1|AE003912_6 phage-related protein [Xylella fastidiosa 9a5c]
Length = 503
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 173
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 254 ITPFQFESKDVRIQLDEASAPWFNANDVCSILEF 287
>gi|28199601|ref|NP_779915.1| hypothetical protein PD1726 [Xylella fastidiosa Temecula1]
gi|77747679|ref|NP_779339.2| hypothetical protein PD1133 [Xylella fastidiosa Temecula1]
gi|28057716|gb|AAO29564.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 503
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 173
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 254 ITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 287
>gi|182681747|ref|YP_001829907.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182682342|ref|YP_001830502.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057123|gb|AAO28988.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631857|gb|ACB92633.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182632452|gb|ACB93228.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307578623|gb|ADN62592.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
gi|307580176|gb|ADN64145.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 535
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L +T+
Sbjct: 167 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTN 205
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 286 ITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 319
>gi|273810427|ref|YP_003344898.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097802|gb|ACV41108.1| Bro-N family protein [Xylella phage Xfas53]
Length = 431
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E +R VVD+ G WF+ KDVA L +T+
Sbjct: 180 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTN 218
>gi|71898928|ref|ZP_00681095.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731340|gb|EAO33404.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 387
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E +R VVD+ G WF+ KDVA L +T+
Sbjct: 137 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTN 175
>gi|71276718|ref|ZP_00652986.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71276734|ref|ZP_00653001.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900867|ref|ZP_00682983.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71902520|ref|ZP_00684445.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162461|gb|EAO12196.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71162476|gb|EAO12210.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71727755|gb|EAO30023.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729338|gb|EAO31453.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 370
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF+ E +R VVD+ G WF+ KDVA L +T+
Sbjct: 1 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYTN 39
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 121 ITPFQFESKDVRIQLDEASAPWFNANDVCAVLEF 154
>gi|71901490|ref|ZP_00683577.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728746|gb|EAO30890.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 412
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF E + +R VVD+ G WF+ KDVA L + +
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYAN 199
>gi|28198899|ref|NP_779213.1| hypothetical protein PD1001 [Xylella fastidiosa Temecula1]
gi|182681602|ref|YP_001829762.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28056997|gb|AAO28862.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631712|gb|ACB92488.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307580036|gb|ADN64005.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 262
Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ M PF E + +R VVD+ G WF+ DVA L + +
Sbjct: 12 MNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYAN 50
>gi|15838264|ref|NP_298952.1| hypothetical protein XF1663 [Xylella fastidiosa 9a5c]
gi|9106723|gb|AAF84472.1|AE003992_8 phage-related protein [Xylella fastidiosa 9a5c]
Length = 381
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF+ E +R VVD+ G WF+ KDVA L + +
Sbjct: 12 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYAN 50
Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +RI +DE WF DV L+F
Sbjct: 132 ITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 165
>gi|71899745|ref|ZP_00681896.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730440|gb|EAO32520.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 251
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PF+ E + +R VVD+ G WF+ DVA L + +
Sbjct: 1 MNAITPFHFESHAVRTVVDDHGEVWFVGTDVATVLGYAN 39
>gi|169633393|ref|YP_001707129.1| hypothetical protein ABSDF1750 [Acinetobacter baumannii SDF]
gi|169152185|emb|CAP01089.1| hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 260
Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS+M FN N IR +V +DG WF+ DVA L +
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFIAADVATVLGY 37
>gi|184157378|ref|YP_001845717.1| prophage antirepressor [Acinetobacter baumannii ACICU]
gi|183208972|gb|ACC56370.1| Prophage antirepressor [Acinetobacter baumannii ACICU]
Length = 250
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
MS++ FN N IR V+ +DG WF+ DVA L+++
Sbjct: 1 MSNISVFNFNQNEIRTVLKDDGEIWFVASDVATVLEYS 38
>gi|169634092|ref|YP_001707828.1| hypothetical protein ABSDF2615 [Acinetobacter baumannii SDF]
gi|169152884|emb|CAP01922.1| conserved hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 94
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
MS+M FN N IR +V +DG WF+ DVA L +
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFVAADVATVLGY 37
>gi|144898901|emb|CAM75765.1| BRO, N-terminal [Magnetospirillum gryphiswaldense MSR-1]
Length = 300
Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M++++PF E + IR VVD DG WF+ KDVA L + + T
Sbjct: 1 MTNIVPFEFEGSAIR-VVDIDGAPWFVGKDVAERLGYANAT 40
>gi|312962012|ref|ZP_07776509.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
gi|311283822|gb|EFQ62406.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
Length = 283
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
S +IPF+ + IR++ D+ G+ WF+ +DVA L ++
Sbjct: 28 SAVIPFDFDGAAIRVITDKLGDPWFVARDVADALGYS 64
>gi|330810751|ref|YP_004355213.1| phage regulatory protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378859|gb|AEA70209.1| Putative phage regulatory protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 283
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ +IPF+ + IR++ DE G+ WF+ +DVA L +
Sbjct: 28 NSVIPFDFDGGAIRVITDELGDPWFVARDVADALGY 63
>gi|283852564|ref|ZP_06369831.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
gi|283572012|gb|EFC20005.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
Length = 323
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
S+ +PF E + IR V++ DGN WF+ +DV ++ +
Sbjct: 13 SNPVPFAFESHEIRTVINGDGNPWFVARDVCAAMNIS 49
>gi|53803190|ref|YP_115046.1| hypothetical protein MCA2642 [Methylococcus capsulatus str. Bath]
gi|53756951|gb|AAU91242.1| conserved domain protein [Methylococcus capsulatus str. Bath]
Length = 252
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+++IPF+ E P+R+V D G WF+ DVA L++
Sbjct: 3 TELIPFDFEGRPVRVVTDAQGEPWFVAADVAQSLEY 38
>gi|310286594|ref|YP_003937852.1| phage anti-repressor protein [Bifidobacterium bifidum S17]
gi|309250530|gb|ADO52278.1| putative phage anti-repressor protein [Bifidobacterium bifidum
S17]
Length = 260
Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+++ PF+ + N +RI+ D+ G WF+ KDV L +
Sbjct: 4 NNLQPFDFKGNQVRILTDKKGEPWFVAKDVCNVLGY 39
>gi|307544693|ref|YP_003897172.1| prophage antirepressor [Halomonas elongata DSM 2581]
gi|307216717|emb|CBV41987.1| prophage antirepressor [Halomonas elongata DSM 2581]
Length = 262
Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M + PFN + +R++ +DG F+ KDVA L +
Sbjct: 1 MQSIQPFNFDSQQVRVIQGDDGEPMFVAKDVAAALGY 37
>gi|71901481|ref|ZP_00683568.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728737|gb|EAO30881.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 188
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DVA L +
Sbjct: 4 SIIPFDFHSHSVRVVM-RDGNPWFVATDVAVALGY 37
>gi|160898695|ref|YP_001564277.1| prophage antirepressor [Delftia acidovorans SPH-1]
gi|160364279|gb|ABX35892.1| prophage antirepressor [Delftia acidovorans SPH-1]
Length = 270
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
MS++ PF + + I ++ ++ G WF+ K+V+G L ++
Sbjct: 1 MSNITPFKFQDHEITVLTNDSGEPWFIAKEVSGVLGYS 38
>gi|71276717|ref|ZP_00652985.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900866|ref|ZP_00682982.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162475|gb|EAO12209.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729337|gb|EAO31452.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 264
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+IPF+ + +R+V+ DGN WF+ KDV LD+ + +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAATS 41
>gi|170730310|ref|YP_001775743.1| hypothetical protein Xfasm12_1161 [Xylella fastidiosa M12]
gi|167965103|gb|ACA12113.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 193
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DV L +
Sbjct: 4 SIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGY 37
>gi|9107709|gb|AAF85304.1|AE004058_5 hypothetical protein XF_2506 [Xylella fastidiosa 9a5c]
Length = 460
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DV L +
Sbjct: 192 SIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGY 225
>gi|77747607|ref|NP_299784.2| hypothetical protein XF2506 [Xylella fastidiosa 9a5c]
Length = 272
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DV L +
Sbjct: 4 SIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGY 37
>gi|71899743|ref|ZP_00681894.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730438|gb|EAO32518.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 203
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+IPF+ + +R+V+ DGN WF+ KDV LD+ +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAETS 41
>gi|307580159|gb|ADN64128.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 188
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DVA L +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFVATDVAVALGY 37
>gi|273810441|ref|YP_003344912.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097816|gb|ACV41122.1| Bro-N family protein [Xylella phage Xfas53]
Length = 188
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DVA L +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFVATDVAVALGY 37
>gi|28199008|ref|NP_779322.1| hypothetical protein PD1116 [Xylella fastidiosa Temecula1]
gi|182681723|ref|YP_001829883.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057106|gb|AAO28971.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631833|gb|ACB92609.1| prophage antirepressor [Xylella fastidiosa M23]
Length = 188
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DVA L +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFVATDVAVALGY 37
>gi|71898940|ref|ZP_00681107.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731352|gb|EAO33416.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 196
Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF+ DVA L +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFIATDVAVALGY 37
>gi|108763205|ref|YP_630118.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
gi|108467085|gb|ABF92270.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
Length = 270
Score = 42.3 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + F+ E + +R+V D G +WF+ KD+A L++
Sbjct: 1 MNQPVAFDFESHHVRVVTDAHGEHWFVAKDIAESLEY 37
>gi|170720501|ref|YP_001748189.1| prophage antirepressor [Pseudomonas putida W619]
gi|169758504|gb|ACA71820.1| prophage antirepressor [Pseudomonas putida W619]
Length = 256
Score = 41.9 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
++IPFN + IR+V D WF+ KD+A L ++
Sbjct: 2 NLIPFNFNGHEIRVVKDHANEPWFVAKDIADDLGYS 37
>gi|255020306|ref|ZP_05292374.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
gi|254970226|gb|EET27720.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
Length = 257
Score = 41.9 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+++IPF+ E P+R+V D G WF+ DV L+ + T
Sbjct: 3 TELIPFDFEGRPVRVVTDAQGEPWFVAADVCAVLELPNTT 42
>gi|71899744|ref|ZP_00681895.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730439|gb|EAO32519.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 196
Score = 41.9 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF+ + +R+V+ DGN WF DVA L +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFAATDVAVALGY 37
>gi|239621455|ref|ZP_04664486.1| prophage antirepressor [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|239515916|gb|EEQ55783.1| prophage antirepressor [Bifidobacterium longum subsp. infantis
CCUG 52486]
Length = 255
Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
S++ PF NP+ V E+G F K VA L +
Sbjct: 4 SNVQPFEFRGNPVATVTAENGTVLFCAKHVATALGY 39
>gi|224541900|ref|ZP_03682439.1| hypothetical protein CATMIT_01073 [Catenibacterium mitsuokai DSM
15897]
gi|224525134|gb|EEF94239.1| hypothetical protein CATMIT_01073 [Catenibacterium mitsuokai DSM
15897]
Length = 244
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+++ FN E N +R + + DG WF+ KD A L +
Sbjct: 1 MNEVQLFNFESNSVRAL-ERDGQAWFVAKDAAKTLGY 36
>gi|222112392|ref|YP_002554656.1| prophage antirepressor [Acidovorax ebreus TPSY]
gi|221731836|gb|ACM34656.1| prophage antirepressor [Acidovorax ebreus TPSY]
Length = 252
Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
MS +IPF E + +R+ VD+ G WF DV L+
Sbjct: 1 MSAIIPFQFEAHAVRVQVDDQGQPWFNATDVCDALE 36
>gi|296112028|ref|YP_003622410.1| putative antirepressor - phage associated [Leuconostoc kimchii
IMSNU 11154]
gi|295833560|gb|ADG41441.1| putative antirepressor - phage associated [Leuconostoc kimchii
IMSNU 11154]
Length = 234
Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
M+++ FN E N +R VV + W + KDVA L ++
Sbjct: 1 MNEVAVFNFETNEVRTVVINEE-VWLVAKDVATTLGYS 37
>gi|37527835|ref|NP_931180.1| hypothetical protein plu3980 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787271|emb|CAE16352.1| unnamed protein product [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 190
Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
+ PF E+ +R ++ ++GN+WF+ +DV L T+
Sbjct: 5 SVTPFIFENQQVRTLI-KNGNFWFVAQDVCDALKITN 40
>gi|317163970|gb|ADV07511.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 108
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|260440833|ref|ZP_05794649.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
gi|291044151|ref|ZP_06569867.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291012614|gb|EFE04603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240127893|ref|ZP_04740554.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
gi|268686287|ref|ZP_06153149.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626571|gb|EEZ58971.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240123213|ref|ZP_04736169.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|268681838|ref|ZP_06148700.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268622122|gb|EEZ54522.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240117658|ref|ZP_04731720.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|268603359|ref|ZP_06137526.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268587490|gb|EEZ52166.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240115355|ref|ZP_04729417.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|268601036|ref|ZP_06135203.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268585167|gb|EEZ49843.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240112608|ref|ZP_04727098.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|268598677|ref|ZP_06132844.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268582808|gb|EEZ47484.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240081025|ref|ZP_04725568.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|268597136|ref|ZP_06131303.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268550924|gb|EEZ45943.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|240014407|ref|ZP_04721320.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
Length = 278
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|239998687|ref|ZP_04718611.1| putative phage associated protein [Neisseria gonorrhoeae 35/02]
gi|268594538|ref|ZP_06128705.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268547927|gb|EEZ43345.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
Length = 281
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|254493410|ref|ZP_05106581.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|226512450|gb|EEH61795.1| predicted protein [Neisseria gonorrhoeae 1291]
Length = 283
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|194098248|ref|YP_002001304.1| putative phage associated protein [Neisseria gonorrhoeae
NCCP11945]
gi|193933538|gb|ACF29362.1| putative phage associated protein [Neisseria gonorrhoeae
NCCP11945]
Length = 281
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|59801452|ref|YP_208164.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|240016839|ref|ZP_04723379.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
gi|240120878|ref|ZP_04733840.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|240125457|ref|ZP_04738343.1| putative phage associated protein [Neisseria gonorrhoeae
SK-92-679]
gi|268684051|ref|ZP_06150913.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|59718347|gb|AAW89752.1| hypothetical protein, putative phage associated protein
[Neisseria gonorrhoeae FA 1090]
gi|268624335|gb|EEZ56735.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 281
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +T+
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTN 39
>gi|323517747|gb|ADX92128.1| prophage antirepressor [Acinetobacter baumannii TCDC-AB0715]
Length = 253
Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M+++ FN +R +V +DG WF++ DV L+ +++
Sbjct: 1 MNNVSVFNFNQKEVRTIVKKDGEIWFVLSDVCNVLEIGNVS 41
>gi|258543092|ref|YP_003188525.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256634170|dbj|BAI00146.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256637230|dbj|BAI03199.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-03]
gi|256640282|dbj|BAI06244.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-07]
gi|256643339|dbj|BAI09294.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-22]
gi|256646394|dbj|BAI12342.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-26]
gi|256649447|dbj|BAI15388.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-32]
gi|256652433|dbj|BAI18367.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655491|dbj|BAI21418.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-12]
Length = 234
Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++IPFN E + +R++ DG WF++ DV L+ T+
Sbjct: 1 MSNIIPFNFEDHAVRVIT-RDGEPWFVLADVCDVLEHTN 38
>gi|15320633|ref|NP_203477.1| hypothetical protein Mx8p63 [Myxococcus phage Mx8]
gi|15281743|gb|AAK94398.1|AF396866_63 p63 [Myxococcus phage Mx8]
Length = 245
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 6 PFNLE-HNPIRIVVDEDGNYWFMVKDVAGGLDF 37
PF E IR+VVDE G WF+ +D+A L++
Sbjct: 13 PFLFEGSTRIRVVVDEAGEPWFVAQDIAHALEY 45
>gi|148912801|ref|YP_001293380.1| Conserved hypothetical protein; putative antirepressor
[Pseudomonas phage F10]
Length = 265
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
++IP++ ++++VDE+G WF+ +VA L ++
Sbjct: 2 NLIPYDFNSKRLQVLVDENGEPWFIAMEVAEILGYS 37
>gi|294102125|ref|YP_003553983.1| prophage antirepressor [Aminobacterium colombiense DSM 12261]
gi|293617105|gb|ADE57259.1| prophage antirepressor [Aminobacterium colombiense DSM 12261]
Length = 257
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M + F E+ +R+ +DE GN W++ +DV L +++
Sbjct: 1 MKGLQIFEFENQDVRVRIDEAGNPWWVARDVCDVLGYSN 39
>gi|227496445|ref|ZP_03926729.1| phage antirepressor protein [Actinomyces urogenitalis DSM 15434]
gi|226834027|gb|EEH66410.1| phage antirepressor protein [Actinomyces urogenitalis DSM 15434]
Length = 262
Score = 39.6 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++IPF+ E R + D G WF+ DV L ++
Sbjct: 1 MSEVIPFDYEGTNFRALQDSAGEPWFVANDVCEALGLSN 39
>gi|254804765|ref|YP_003082986.1| putative prophage antirepressor protein [Neisseria meningitidis
alpha14]
gi|254668307|emb|CBA05261.1| putative prophage antirepressor protein [Neisseria meningitidis
alpha14]
Length = 282
Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + N +R V D G WF+ DV L +++
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYSN 39
>gi|294789953|ref|ZP_06755172.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
gi|294482110|gb|EFG29818.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
Length = 283
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 2 SDMIPFNL-EHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
+ + F E++ IR + DE G +WF+ DV G L + +
Sbjct: 14 NQISTFKFSENHSIRTIADEKGEFWFLANDVCGVLGYVN 52
>gi|299530348|ref|ZP_07043773.1| hypothetical protein CTS44_06218 [Comamonas testosteroni S44]
gi|298721719|gb|EFI62651.1| hypothetical protein CTS44_06218 [Comamonas testosteroni S44]
Length = 255
Score = 39.2 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
MS++ PF + + + ++ D+DG+ F+ +VA L ++
Sbjct: 1 MSNITPFVFDGHNVTVIADDDGSLRFVAMEVADILGYS 38
>gi|190573874|ref|YP_001971719.1| putative phage-like protein [Stenotrophomonas maltophilia K279a]
gi|190011796|emb|CAQ45416.1| putative phage-related protein [Stenotrophomonas maltophilia
K279a]
Length = 253
Score = 39.2 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
MS +IPF E + +RI VD G WF DV L+
Sbjct: 1 MSAIIPFQFEAHAVRIQVDGAGLPWFNASDVCNALE 36
>gi|167039880|ref|YP_001662865.1| prophage antirepressor [Thermoanaerobacter sp. X514]
gi|300915306|ref|ZP_07132620.1| prophage antirepressor [Thermoanaerobacter sp. X561]
gi|307724796|ref|YP_003904547.1| prophage antirepressor [Thermoanaerobacter sp. X513]
gi|166854120|gb|ABY92529.1| prophage antirepressor [Thermoanaerobacter sp. X514]
gi|300888582|gb|EFK83730.1| prophage antirepressor [Thermoanaerobacter sp. X561]
gi|307581857|gb|ADN55256.1| prophage antirepressor [Thermoanaerobacter sp. X513]
Length = 263
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
M+ + FN E N +R V+ +DGN W+++KDV LD
Sbjct: 1 MNKITLFNYEGNTVRTVM-KDGNPWWVLKDVCSVLD 35
>gi|170730325|ref|YP_001775758.1| hypothetical protein Xfasm12_1177 [Xylella fastidiosa M12]
gi|167965118|gb|ACA12128.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 420
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + PF E +RI +DE WF DV L+F
Sbjct: 169 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 205
>gi|71899883|ref|ZP_00682031.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730323|gb|EAO32406.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 388
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + PF E +RI +DE WF DV L+F
Sbjct: 137 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 173
>gi|71901327|ref|ZP_00683423.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728911|gb|EAO31046.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 388
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + PF E +RI +DE WF DV L+F
Sbjct: 137 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 173
>gi|71276266|ref|ZP_00652544.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900321|ref|ZP_00682456.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162874|gb|EAO12598.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729896|gb|EAO31992.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 408
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + PF E +RI +DE WF DV L+F
Sbjct: 157 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEF 193
>gi|301170189|emb|CBW29793.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 225
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
F + N +R++ D++ WF DV L +++
Sbjct: 10 FTFKSNSVRVITDKNQEPWFCANDVCDILGYSN 42
>gi|320352352|ref|YP_004193691.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
gi|320120854|gb|ADW16400.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
Length = 263
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+IPF E N IR + DG+ WF+ +DV L++
Sbjct: 11 VIPFQFESNEIRALT-IDGDPWFVARDVCDVLEY 43
>gi|213967380|ref|ZP_03395528.1| phage protein [Pseudomonas syringae pv. tomato T1]
gi|213927681|gb|EEB61228.1| phage protein [Pseudomonas syringae pv. tomato T1]
Length = 285
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
+S++IPF E +R ++ D WF+ DV+ L ++
Sbjct: 8 VSNVIPFRFETKEVRTLLINDQP-WFVANDVSAALLYS 44
>gi|313123987|ref|YP_004034246.1| anti-repressor-like protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280550|gb|ADQ61269.1| anti-repressor-like protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 259
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN E +P+R V++ D WF+ KDVA L +++
Sbjct: 8 FNFESSPVR-VIEIDNEPWFVGKDVAKVLGYSN 39
>gi|116492795|ref|YP_804530.1| phage-encoded protein [Pediococcus pentosaceus ATCC 25745]
gi|116102945|gb|ABJ68088.1| Uncharacterized phage-encoded protein [Pediococcus pentosaceus
ATCC 25745]
Length = 267
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+++ FN E N +R V+ D Y F+ KDVA + +
Sbjct: 1 MNELQNFNFEGNEVRTVLINDEPY-FVGKDVATAIGY 36
>gi|330985509|gb|EGH83612.1| prophage antirepressor [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 285
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
+S++IPF E +R ++ D WF+ DV+ L ++
Sbjct: 8 VSNVIPFRFEAKEVRTLLINDQP-WFVANDVSAALLYS 44
>gi|262046894|ref|ZP_06019854.1| prophage antirepressor [Lactobacillus crispatus MV-3A-US]
gi|260572876|gb|EEX29436.1| prophage antirepressor [Lactobacillus crispatus MV-3A-US]
Length = 267
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
M+ + FN E++ +R VV DG WF+ KDVA L ++
Sbjct: 1 MNQLTLFNFENSQLR-VVKIDGEPWFVGKDVAQILGYS 37
>gi|260555806|ref|ZP_05828026.1| gp54 protein [Acinetobacter baumannii ATCC 19606]
gi|260410717|gb|EEX04015.1| gp54 protein [Acinetobacter baumannii ATCC 19606]
Length = 184
Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
M+ + F+ + +RIV+D++ WF + DV LD +
Sbjct: 1 MNAITHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDIS 38
>gi|269955332|ref|YP_003325121.1| prophage antirepressor [Xylanimonas cellulosilytica DSM 15894]
gi|269304013|gb|ACZ29563.1| prophage antirepressor [Xylanimonas cellulosilytica DSM 15894]
Length = 259
Score = 38.5 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSI 40
+D+ F+ +RI+ DE G+ WF+ DVA L +I
Sbjct: 3 TDLQQFDFHGAGVRIITDEHGDPWFVAADVAAALSLGNI 41
>gi|209552444|ref|YP_002284359.1| hypothetical protein PAJU2_gp25 [Pseudomonas phage PAJU2]
gi|209528717|dbj|BAG75009.1| hypothetical protein [Pseudomonas phage PAJU2]
Length = 286
Score = 38.1 bits (87), Expect = 0.37, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
+ +IPF + +R ++ +D WF+ DVA L + +
Sbjct: 4 AKVIPFQFDAREVRTMLIDDQP-WFVATDVAASLGYPA 40
>gi|218665269|ref|YP_002425545.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517482|gb|ACK78068.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 313
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
M ++IPF E IR++ E+G W++ DV L
Sbjct: 1 MQNVIPFEYEGRDIRVIPGENGEPWWVAVDVCRALG 36
>gi|169796904|ref|YP_001714697.1| hypothetical protein ABAYE2900 [Acinetobacter baumannii AYE]
gi|213156693|ref|YP_002318354.1| gp54 protein [Acinetobacter baumannii AB0057]
gi|301346240|ref|ZP_07226981.1| gp54 protein [Acinetobacter baumannii AB056]
gi|301513005|ref|ZP_07238242.1| gp54 protein [Acinetobacter baumannii AB058]
gi|301597472|ref|ZP_07242480.1| gp54 protein [Acinetobacter baumannii AB059]
gi|332874188|ref|ZP_08442111.1| BRO family protein [Acinetobacter baumannii 6014059]
gi|169149831|emb|CAM87722.1| hypothetical protein from bacteriophage [Acinetobacter baumannii
AYE]
gi|213055853|gb|ACJ40755.1| gp54 protein [Acinetobacter baumannii AB0057]
gi|323517038|gb|ADX91419.1| hypothetical protein ABTW07_0983 [Acinetobacter baumannii
TCDC-AB0715]
gi|332737610|gb|EGJ68514.1| BRO family protein [Acinetobacter baumannii 6014059]
Length = 184
Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
M+ + F+ + +RIV+D++ WF + DV LD +
Sbjct: 1 MNAVTHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDIS 38
>gi|312114251|ref|YP_004011847.1| prophage antirepressor [Rhodomicrobium vannielii ATCC 17100]
gi|311219380|gb|ADP70748.1| prophage antirepressor [Rhodomicrobium vannielii ATCC 17100]
Length = 256
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSI 40
+ ++PF+ E N +R +V+ DG WF++ DV L+ ++
Sbjct: 5 AAIVPFDFEGNNVR-IVNRDGEAWFVLADVCRVLEIANV 42
>gi|218290598|ref|ZP_03494700.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
gi|218239382|gb|EED06579.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
Length = 256
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
M ++PF E +R+VV DG W++ KDV L
Sbjct: 4 MDTLLPFEYEGKQVRVVV-VDGEPWWVAKDVCDVLG 38
>gi|292491104|ref|YP_003526543.1| BRO domain protein [Nitrosococcus halophilus Nc4]
gi|291579699|gb|ADE14156.1| BRO domain protein [Nitrosococcus halophilus Nc4]
Length = 316
Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
M+D+IPFN + + IR+V+ DG WF+ KD+ L+
Sbjct: 1 MNDLIPFNFDGHDIRVVM-IDGEPWFVAKDLCDVLE 35
>gi|309378131|emb|CBX23230.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 282
Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + N + + +R V D G WF+ DV L +++
Sbjct: 1 MNAVQVLNFQQSSVRTVADNKGELWFLANDVCEILGYSN 39
>gi|295086054|emb|CBK67577.1| Prophage antirepressor [Bacteroides xylanisolvens XB1A]
Length = 258
Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 10 EHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
E IR V++DG WF KDVA L + +
Sbjct: 11 EFGKIRT-VEKDGKIWFCAKDVAASLGYAN 39
>gi|265755711|ref|ZP_06090332.1| BRO family antirepressor [Bacteroides sp. 3_1_33FAA]
gi|263234317|gb|EEZ19910.1| BRO family antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 258
Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 10 EHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
E IR V++DG WF KDVA L + +
Sbjct: 11 EFGKIRT-VEKDGKIWFCAKDVAASLGYAN 39
>gi|332852416|ref|ZP_08434185.1| hypothetical protein HMPREF0021_01760 [Acinetobacter baumannii
6013150]
gi|332870997|ref|ZP_08439610.1| hypothetical protein HMPREF0020_03263 [Acinetobacter baumannii
6013113]
gi|332729260|gb|EGJ60602.1| hypothetical protein HMPREF0021_01760 [Acinetobacter baumannii
6013150]
gi|332731757|gb|EGJ63037.1| hypothetical protein HMPREF0020_03263 [Acinetobacter baumannii
6013113]
Length = 51
Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
M+ + F+ + +RIV+D++ WF + DV LD +
Sbjct: 1 MNAITHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDIS 38
>gi|257879465|ref|ZP_05659118.1| BRO [Enterococcus faecium 1,230,933]
gi|257881736|ref|ZP_05661389.1| BRO [Enterococcus faecium 1,231,502]
gi|257890224|ref|ZP_05669877.1| BRO [Enterococcus faecium 1,231,410]
gi|260558840|ref|ZP_05831029.1| anti-repressor protein [Enterococcus faecium C68]
gi|293560440|ref|ZP_06676932.1| phage anti-repressor protein [Enterococcus faecium E1162]
gi|293570339|ref|ZP_06681398.1| phage anti-repressor protein [Enterococcus faecium E980]
gi|294621638|ref|ZP_06700803.1| phage anti-repressor protein [Enterococcus faecium U0317]
gi|257813693|gb|EEV42451.1| BRO [Enterococcus faecium 1,230,933]
gi|257817394|gb|EEV44722.1| BRO [Enterococcus faecium 1,231,502]
gi|257826584|gb|EEV53210.1| BRO [Enterococcus faecium 1,231,410]
gi|260075299|gb|EEW63612.1| anti-repressor protein [Enterococcus faecium C68]
gi|291598803|gb|EFF29855.1| phage anti-repressor protein [Enterococcus faecium U0317]
gi|291605588|gb|EFF35030.1| phage anti-repressor protein [Enterococcus faecium E1162]
gi|291609585|gb|EFF38848.1| phage anti-repressor protein [Enterococcus faecium E980]
Length = 258
Score = 37.3 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ FN E N +R ++ D Y F+ KDVA L +++
Sbjct: 1 MNTPQIFNFEQNEVRTILVNDEPY-FVGKDVASVLGYSN 38
>gi|314950087|ref|ZP_07853373.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
gi|313643528|gb|EFS08108.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
Length = 261
Score = 37.3 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ FN E N +R ++ D Y F+ KDVA L +++
Sbjct: 4 MNTPQIFNFEQNEVRTILVNDEPY-FVGKDVASVLGYSN 41
>gi|294341350|emb|CAZ89766.1| putative Prophage antirepressor [Thiomonas sp. 3As]
Length = 413
Score = 37.3 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 4 MIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSI 40
+I + E NPI + + EDG+ W+ K + L F +
Sbjct: 10 IIRLDFEGNPILVQMGEDGSVWYTAKPLCTALGFKKM 46
>gi|192291449|ref|YP_001992054.1| prophage antirepressor [Rhodopseudomonas palustris TIE-1]
gi|192285198|gb|ACF01579.1| prophage antirepressor [Rhodopseudomonas palustris TIE-1]
Length = 270
Score = 37.3 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ PF E +R +V++ G WF+ DVA L +
Sbjct: 5 TVSPFQFEGRNVR-LVEQGGETWFVATDVARELGY 38
>gi|220920614|ref|YP_002495915.1| prophage antirepressor [Methylobacterium nodulans ORS 2060]
gi|219945220|gb|ACL55612.1| prophage antirepressor [Methylobacterium nodulans ORS 2060]
Length = 295
Score = 36.9 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + F+ E +R + DG WF+ DV L T+
Sbjct: 1 MNALQTFDFESQAVRSF-ERDGQVWFVAADVCRALGLTN 38
>gi|30995448|ref|NP_439568.2| hypothetical protein HI1418 [Haemophilus influenzae Rd KW20]
Length = 188
Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN + P+R+++D G +WF DV L +T+
Sbjct: 10 FNFKDLPVRVILDPKGEFWFCGTDVCHILGYTN 42
>gi|1175791|sp|P44189|Y1418_HAEIN RecName: Full=Uncharacterized protein HI_1418
gi|1574254|gb|AAC23068.1| predicted coding region HI1418 [Haemophilus influenzae Rd KW20]
Length = 201
Score = 36.9 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN + P+R+++D G +WF DV L +T+
Sbjct: 23 FNFKDLPVRVILDPKGEFWFCGTDVCHILGYTN 55
>gi|76809803|ref|YP_333048.1| BRO domain-containing protein [Burkholderia pseudomallei 1710b]
gi|76579256|gb|ABA48731.1| BRO family, N-terminal domain protein [Burkholderia pseudomallei
1710b]
Length = 239
Score = 36.9 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MSD+ F E +R V +G+ WF+ KDV L T+
Sbjct: 1 MSDLTLFKFEGRNLRT-VKINGDPWFVAKDVCDVLGITN 38
>gi|224475960|ref|YP_002633566.1| putative antirepressor, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420567|emb|CAL27381.1| putative antirepressor, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 255
Score = 36.9 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E P+R ++ +D Y F+ KDVA L +++
Sbjct: 1 MSELQVFNFEELPVRTLIMDDEPY-FVGKDVAEVLGYSN 38
>gi|308180883|ref|YP_003925011.1| hypothetical protein LPST_C1701 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308046374|gb|ADN98917.1| hypothetical protein LPST_C1701 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 250
Score = 36.9 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + PFN E + +R + + + WF + D++ L ++
Sbjct: 1 MNQITPFNFEGHQVRTI-ERENIIWFAMPDISKSLGLSN 38
>gi|330977751|gb|EGH77654.1| hypothetical protein PSYAP_13385 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 140
Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+ + PF+ PIR++ G +F+ KD+A L + + +
Sbjct: 28 AQVTPFDFHGFPIRVLDSIHGEPYFIAKDIAEALGYANTS 67
>gi|307826181|ref|ZP_07656392.1| prophage antirepressor [Methylobacter tundripaludum SV96]
gi|307732820|gb|EFO03686.1| prophage antirepressor [Methylobacter tundripaludum SV96]
Length = 193
Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 13/31 (41%)
Query: 6 PFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
PF IR DE WF KDV LD
Sbjct: 10 PFQFSELDIRTATDEHSEVWFNAKDVCTALD 40
>gi|37526842|ref|NP_930186.1| hypothetical protein plu2952 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786274|emb|CAE15326.1| unnamed protein product [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 271
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
S+ F + IR V+++DG WF+ DV L+ +IT
Sbjct: 11 SNFTIFKFGSHEIR-VINKDGEPWFVAHDVCSALEIQNIT 49
>gi|260580749|ref|ZP_05848575.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260092566|gb|EEW76503.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 222
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN + P+R+++D G +WF DV L +T+
Sbjct: 10 FNFKDLPVRVILDPKGEFWFCGTDVCHILGYTN 42
>gi|169632805|ref|YP_001706541.1| putative prophage antirepressor [Acinetobacter baumannii SDF]
gi|169151597|emb|CAP00374.1| conserved hypothetical protein; putative prophage antirepressor
[Acinetobacter baumannii]
Length = 268
Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E N ++ + N WF+ KD+ L ++
Sbjct: 1 MSNLSVFNFEQNSQIRIIMINSNPWFVAKDICDALGLSN 39
>gi|188581117|ref|YP_001924562.1| prophage antirepressor [Methylobacterium populi BJ001]
gi|179344615|gb|ACB80027.1| prophage antirepressor [Methylobacterium populi BJ001]
Length = 293
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ + PF+ E P+R VV DG F+ D+A L +
Sbjct: 19 ASITPFDFEGTPVR-VVSVDGEPCFVASDLARSLGY 53
>gi|68250068|ref|YP_249180.1| hypothetical protein NTHI1733 [Haemophilus influenzae 86-028NP]
gi|68058267|gb|AAX88520.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 261
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN +++P+R + D + WF DV L + +
Sbjct: 49 FNFKNSPVRTITDPNSEIWFCGTDVCDILGYVN 81
>gi|319896720|ref|YP_004134913.1| hypothetical protein HIBPF03470 [Haemophilus influenzae F3031]
gi|317432222|emb|CBY80574.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 240
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN + P+R++ D G +WF DV L +T+
Sbjct: 52 FNFKDLPVRVISDPKGEFWFCGTDVCAILGYTN 84
>gi|319775742|ref|YP_004138230.1| hypothetical protein HICON_10850 [Haemophilus influenzae F3047]
gi|317450333|emb|CBY86549.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 240
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN + P+R++ D G +WF DV L +T+
Sbjct: 52 FNFKDLPVRVISDPKGEFWFCGTDVCAILGYTN 84
>gi|227431802|ref|ZP_03913829.1| prophage LambdaSa2, antirepressor protein [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227352485|gb|EEJ42684.1| prophage LambdaSa2, antirepressor protein [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 237
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN E + +R + ED WF+ KDVA L +++
Sbjct: 8 FNFETSRVRTLNLEDV-IWFVGKDVADTLGYSA 39
>gi|160946092|ref|ZP_02093306.1| hypothetical protein PEPMIC_00041 [Parvimonas micra ATCC 33270]
gi|158447824|gb|EDP24819.1| hypothetical protein PEPMIC_00041 [Parvimonas micra ATCC 33270]
Length = 255
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M+ + F + N +R ++ +DG WF+ KDV L+ T+ T
Sbjct: 1 MNQLKVFGFKQNEVRTIL-KDGEPWFVAKDVCEILEITNPT 40
>gi|319775359|ref|YP_004137847.1| prophage antirepressor [Haemophilus influenzae F3047]
gi|329122641|ref|ZP_08251220.1| phage antirepressor protein [Haemophilus aegyptius ATCC 11116]
gi|317449950|emb|CBY86162.1| Possible prophage antirepressor [Haemophilus influenzae F3047]
gi|327472655|gb|EGF18084.1| phage antirepressor protein [Haemophilus aegyptius ATCC 11116]
Length = 214
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN ++ P+R + D + WF DV L +++
Sbjct: 10 FNFKNFPVRTITDPNSEIWFCGTDVCDILGYSN 42
>gi|308048839|ref|YP_003912405.1| prophage antirepressor [Ferrimonas balearica DSM 9799]
gi|307631029|gb|ADN75331.1| prophage antirepressor [Ferrimonas balearica DSM 9799]
Length = 260
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 7 FNLEHNPIRIVVD-EDGNYWFMVKDVAGGLDF 37
FN IR++ D +DG +F+ KDVA L F
Sbjct: 120 FNFNTASIRVIPDFKDGQPYFVAKDVAEALGF 151
>gi|46205473|ref|ZP_00048502.2| COG3617: Prophage antirepressor [Magnetospirillum magnetotacticum
MS-1]
Length = 163
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ + PF+ E P+R VV DG F+ D+A L +
Sbjct: 19 ASITPFDFEGTPVR-VVSVDGEPCFVAADLARSLGY 53
>gi|220903506|ref|YP_002478818.1| prophage antirepressor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867805|gb|ACL48140.1| prophage antirepressor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 180
Score = 36.1 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF--TSIT 41
F ++ +R+ DE G WF+ KDVA L++ +SIT
Sbjct: 8 FVFGNSDVRVAQDETGVLWFVAKDVAEALEYQESSIT 44
>gi|270635191|ref|ZP_06222052.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317460|gb|EFA28953.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 163
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
FN + + +R++ D + +WF DV L +
Sbjct: 10 FNFKSSQVRVITDPNQEFWFCGSDVCYILGY 40
>gi|270659695|ref|ZP_06222358.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270316963|gb|EFA28644.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 77
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
FN + + +R++ D + +WF DV L +
Sbjct: 10 FNFKSSQVRVITDPNQEFWFCGSDVCYILGY 40
>gi|332560969|ref|ZP_08415287.1| BRO domain protein [Rhodobacter sphaeroides WS8N]
gi|332274767|gb|EGJ20083.1| BRO domain protein [Rhodobacter sphaeroides WS8N]
Length = 197
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+++IPF+ E PIR ++ DG+ W++ DV L+ + T
Sbjct: 3 AELIPFDFEDQPIRTLL-RDGSPWWVAADVCRVLEIQNPT 41
>gi|317487261|ref|ZP_07946056.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921451|gb|EFV42742.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 325
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
F + +R V E GN WF+ KDVA L FT
Sbjct: 81 FPVTRQKVRTVWHE-GNVWFVAKDVAECLGFT 111
>gi|14251162|ref|NP_116530.1| hypothetical protein BK5-Tp38 [Lactococcus phage BK5-T]
gi|928839|gb|AAA98590.1| unknown [Lactococcus phage BK5-T]
gi|26005559|emb|CAC80179.1| hypothetical protein [Lactococcus phage BK5-T]
Length = 266
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+++ FN + P+R V+ D WF+ KDVA + +
Sbjct: 1 MNELQNFNFNNLPVRTVLINDEP-WFVGKDVAIAIGY 36
>gi|270598466|ref|ZP_06221528.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270318313|gb|EFA29482.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 194
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
S + FN E N IR +V + WF+ KDV L ++++
Sbjct: 5 SQLSTFNFESNSIRTLVINNEP-WFVAKDVCDTLKISNVS 43
>gi|257885097|ref|ZP_05664750.1| BRO [Enterococcus faecium 1,231,501]
gi|257820949|gb|EEV48083.1| BRO [Enterococcus faecium 1,231,501]
Length = 258
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ F+ E N +R ++ D Y F+ KDVA L +++
Sbjct: 1 MNTPQIFSFEQNEVRTILVNDEPY-FVGKDVASVLGYSN 38
>gi|325849035|ref|ZP_08170527.1| phage antirepressor protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480280|gb|EGC83343.1| phage antirepressor protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 260
Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 8 NLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
N E IRI++DE+ WF+ KDVA L++
Sbjct: 9 NHEFGKIRIILDENNEPWFVGKDVAEILEY 38
>gi|50955842|ref|YP_063130.1| prophage antirepressor protein [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952324|gb|AAT90025.1| prophage antirepressor protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 260
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+++IPF E +R V+ DG WF+++DV L ++ T
Sbjct: 4 TEIIPFTFEEVNVRTVL-VDGEPWFILRDVLSVLGLSNPT 42
>gi|289566846|ref|ZP_06447256.1| prophage antirepressor [Enterococcus faecium D344SRF]
gi|294616694|ref|ZP_06696464.1| phage anti-repressor protein [Enterococcus faecium E1636]
gi|289161377|gb|EFD09267.1| prophage antirepressor [Enterococcus faecium D344SRF]
gi|291590448|gb|EFF22187.1| phage anti-repressor protein [Enterococcus faecium E1636]
Length = 248
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ FN E N +R ++ D Y F+ KDVA L +++
Sbjct: 1 MNTPQIFNFEQNEVRTILVNDEPY-FVGKDVADVLGYSN 38
>gi|261208361|ref|ZP_05923011.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|260077422|gb|EEW65141.1| anti-repressor protein [Enterococcus faecium TC 6]
Length = 251
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ FN E N +R ++ D Y F+ KDVA L +++
Sbjct: 4 MNTPQIFNFEQNEVRTILVNDEPY-FVGKDVADVLGYSN 41
>gi|158425230|ref|YP_001526522.1| putative prophage antirepressor [Azorhizobium caulinodans ORS
571]
gi|158332119|dbj|BAF89604.1| putative prophage antirepressor [Azorhizobium caulinodans ORS
571]
Length = 246
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
M+ + PFN + IR+V+ DG WF+ DV L+
Sbjct: 1 MNALTPFNYRDHTIRVVI-LDGEPWFVAADVCRALE 35
>gi|48697283|ref|YP_025050.1| putative antirepressor protein [Lactobacillus phage phiAT3]
gi|47607174|gb|AAT36510.1| putative antirepressor protein [Lactobacillus phage phiAT3]
Length = 254
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M+++ F E N IR V +G WF DV L T+ T
Sbjct: 1 MNELQLFQFEDNQIRT-VSSNGIIWFSAPDVTNALKLTNTT 40
>gi|227535711|ref|ZP_03965760.1| antirepressor protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227186678|gb|EEI66745.1| antirepressor protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 254
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
M+++ F E N IR V +G WF DV L T+ T
Sbjct: 1 MNELQLFQFEDNQIRT-VSSNGIIWFSAPDVTNALKLTNTT 40
>gi|320352343|ref|YP_004193682.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
gi|320120845|gb|ADW16391.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
Length = 252
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M ++ PF + +R + D WF+ KDVA L + +
Sbjct: 1 MPEITPFCFNDSMVRTLT-IDNAPWFVAKDVAELLGYAN 38
>gi|145636030|ref|ZP_01791706.1| putative antirepressor protein [Haemophilus influenzae PittAA]
gi|145266718|gb|EDK06746.1| putative antirepressor protein [Haemophilus influenzae PittAA]
Length = 149
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
+ + FN E N IR + + WF+ KDV + T+
Sbjct: 5 AQLSTFNFESNSIRTLAINNEP-WFVAKDVCDAIGLTN 41
>gi|226940701|ref|YP_002795775.1| Phage associated-antirepressor [Laribacter hongkongensis HLHK9]
gi|226715628|gb|ACO74766.1| Phage associated-antirepressor [Laribacter hongkongensis HLHK9]
Length = 214
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
F+ E + +R + DG WF++ DV L F+
Sbjct: 17 FSFESHSVRTIY-RDGEIWFVLNDVTEALAFS 47
>gi|125624905|ref|YP_001033388.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493713|emb|CAL98701.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071704|gb|ADJ61104.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 252
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+++ FN + P+R V+ D WF+ KDVA + +
Sbjct: 1 MNELQNFNFNNLPVRTVLINDEP-WFVGKDVAIAIGY 36
>gi|326571054|gb|EGE21078.1| BRO family protein [Moraxella catarrhalis BC7]
Length = 279
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNP-IRIVVDEDGNYWFMVKDVAGGLDFT 38
MS++ FN E +R + G+ WF + DVA L+ +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANVLEIS 39
>gi|167034436|ref|YP_001669667.1| prophage antirepressor [Pseudomonas putida GB-1]
gi|166860924|gb|ABY99331.1| prophage antirepressor [Pseudomonas putida GB-1]
Length = 285
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
+ FN E +R+V+ DG WF +DVA GL +++
Sbjct: 25 TVNLFNFEGFDVRVVL-VDGEPWFSARDVAEGLGYSN 60
>gi|23455724|ref|NP_695033.1| antirepressor [Lactococcus phage r1t]
gi|1353522|gb|AAB18680.1| ORF5 [Lactococcus phage r1t]
Length = 265
Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M ++ FN + P+R V+ D WF+ KDVA + +
Sbjct: 1 MKELQNFNFNNLPVRTVLINDEP-WFVGKDVAIAIGY 36
>gi|116512815|ref|YP_811722.1| phage-encoded protein [Lactococcus lactis subsp. cremoris SK11]
gi|116108469|gb|ABJ73609.1| Uncharacterized phage-encoded protein [Lactococcus lactis subsp.
cremoris SK11]
Length = 260
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+++ FN + P+R V+ +D WF+ KDVA L + +
Sbjct: 1 MNELQNFNFNNLPVRTVLIDDEP-WFVGKDVAKILGYAN 38
>gi|213692398|ref|YP_002322984.1| hypothetical protein Blon_1525 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523859|gb|ACJ52606.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458539|dbj|BAJ69160.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 111
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
+ + PF+ +R++ DE GN WF+ DV L
Sbjct: 3 NQIQPFDFNGIQVRVLTDEHGNPWFLGADVCAILG 37
>gi|224282988|ref|ZP_03646310.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
gi|313140143|ref|ZP_07802336.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
gi|313132653|gb|EFR50270.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
Length = 260
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
+++ F+ +R + D+ G WF+ KDV L ++++
Sbjct: 3 NEIQRFDFRGALLRTLTDKAGEPWFVAKDVCDILGHSNVS 42
>gi|281358555|ref|ZP_06245034.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281314903|gb|EFA98937.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 304
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 3 DMIPFNLE-HNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
++ FN E PIR++ DG WF+ KDV L +T+
Sbjct: 5 ELSVFNFEESTPIRVIT-IDGEQWFVGKDVCQVLGYTN 41
>gi|157325452|ref|YP_001468876.1| gp36 [Listeria phage A006]
gi|66733457|gb|AAY53271.1| gp36 [Listeria phage A006]
Length = 257
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E N +R V E+ + F+ KDVA L +++
Sbjct: 1 MSNLQIFNFEGNEVRTVFIENEPH-FIGKDVAKVLGYSN 38
>gi|281357128|ref|ZP_06243617.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281316159|gb|EFB00184.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 357
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 3 DMIPFNLE-HNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
++ FN E PIR++ DG WF+ KDV L +T+
Sbjct: 5 ELSVFNFEESTPIRVIT-IDGEQWFVGKDVCQVLGYTN 41
>gi|210632120|ref|ZP_03297220.1| hypothetical protein COLSTE_01114 [Collinsella stercoris DSM
13279]
gi|210159716|gb|EEA90687.1| hypothetical protein COLSTE_01114 [Collinsella stercoris DSM
13279]
Length = 251
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
SD+IPF E ++EDG F KDVA L +
Sbjct: 4 SDIIPFTSEQFGTVRTIEEDGRVIFCGKDVAAALGY 39
>gi|332686908|ref|YP_004456682.1| phage antirepressor protein [Melissococcus plutonius ATCC 35311]
gi|332370917|dbj|BAK21873.1| phage antirepressor protein [Melissococcus plutonius ATCC 35311]
Length = 252
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+++ FN E N +R ++ D Y F+ KDVA L +
Sbjct: 1 MNELQIFNFEQNEVRTILVNDEPY-FIGKDVAKILGY 36
>gi|260880940|ref|ZP_05403197.2| BRO family domain protein [Mitsuokella multacida DSM 20544]
gi|260849978|gb|EEX69985.1| BRO family domain protein [Mitsuokella multacida DSM 20544]
Length = 312
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 10 EHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
E +R++ D +GN WF+ KDVA L +
Sbjct: 101 EFQQLRVIEDANGNPWFVGKDVAEDLGY 128
>gi|16799158|ref|NP_469426.1| hypothetical protein lin0080 [Listeria innocua Clip11262]
gi|224503549|ref|ZP_03671856.1| hypothetical protein LmonFR_13752 [Listeria monocytogenes FSL
R2-561]
gi|16412500|emb|CAC95313.1| lin0080 [Listeria innocua Clip11262]
gi|313633540|gb|EFS00348.1| toxin-antitoxin system, toxin component, Bro family [Listeria
seeligeri FSL N1-067]
Length = 257
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E N +R V E+ + F+ KDVA L +++
Sbjct: 1 MSNLQIFNFEGNEVRTVFIENEPH-FIGKDVAKVLGYSN 38
>gi|257866260|ref|ZP_05645913.1| prophage antirepressor [Enterococcus casseliflavus EC30]
gi|257873224|ref|ZP_05652877.1| prophage antirepressor [Enterococcus casseliflavus EC10]
gi|257800218|gb|EEV29246.1| prophage antirepressor [Enterococcus casseliflavus EC30]
gi|257807388|gb|EEV36210.1| prophage antirepressor [Enterococcus casseliflavus EC10]
Length = 257
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + FN E+N +R V+ +D Y F+ KD+A L +
Sbjct: 6 MNQLEIFNFENNEVRTVLVDDEPY-FVGKDIAEVLGY 41
>gi|145629495|ref|ZP_01785293.1| hypothetical protein CGSHi22121_08748 [Haemophilus influenzae
22.1-21]
gi|145638991|ref|ZP_01794599.1| hypothetical protein CGSHiII_02355 [Haemophilus influenzae
PittII]
gi|144978338|gb|EDJ88102.1| hypothetical protein CGSHi22121_08748 [Haemophilus influenzae
22.1-21]
gi|145271963|gb|EDK11872.1| hypothetical protein CGSHiII_02355 [Haemophilus influenzae
PittII]
gi|309750953|gb|ADO80937.1| Putative prophage antirepressor protein [Haemophilus influenzae
R2866]
Length = 213
Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN +++P+ + D + WF DV L + +
Sbjct: 10 FNFKNSPVHTITDPNSEIWFCGTDVCDILGYVN 42
>gi|298384274|ref|ZP_06993834.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 1_1_14]
gi|298262553|gb|EFI05417.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 1_1_14]
Length = 256
Score = 34.6 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 1 MSDMIPFNL-EHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
M+ + F E IR + D DG WF DVA L + +
Sbjct: 1 MNKISIFEHPEFGRIRTL-DIDGKIWFCASDVASALGYAN 39
>gi|319411146|emb|CBY91551.1| Uncharacterized protein HI1418 [Neisseria meningitidis WUE 2594]
Length = 280
Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + FN N I+ V++++G WF+ +VA L +
Sbjct: 1 MNQVQYFNFNQNAIQ-VINKNGEAWFIASEVAAMLGY 36
>gi|296113177|ref|YP_003627115.1| BRO family protein [Moraxella catarrhalis RH4]
gi|295920871|gb|ADG61222.1| BRO family protein [Moraxella catarrhalis RH4]
Length = 263
Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 1 MSDMIPFNLEHNP-IRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E +R + G+ WF + DVA L ++
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISN 40
>gi|71900920|ref|ZP_00683035.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729332|gb|EAO31448.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 202
Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 3 DMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGL 35
+IPF+ E++P+R+++ +G WF+ KD+ L
Sbjct: 5 SVIPFSFENHPVRVLI-INGEPWFVAKDLCAVL 36
>gi|187477955|ref|YP_785979.1| phage protein [Bordetella avium 197N]
gi|115422541|emb|CAJ49066.1| phage protein [Bordetella avium 197N]
Length = 374
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
FN +P+R+VV D WF+ DV LD+
Sbjct: 60 FNFGDHPVRVVV-RDCEPWFVATDVCAALDY 89
>gi|330985518|gb|EGH83621.1| hypothetical protein PLA107_10890 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 60
Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGL 35
+S + PF+ P+R+V G F+ KD+A L
Sbjct: 26 VSQITPFDFHSFPVRVVDSVQGEPHFIAKDIAEAL 60
>gi|317486781|ref|ZP_07945597.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316921944|gb|EFV43214.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 258
Score = 34.6 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MSDMIPFN-LEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
MS+M F E +R VV+ DG WF+ KDV L+ T ++
Sbjct: 1 MSEMQIFEKAEFGKVR-VVERDGQPWFVAKDVCECLELTDVS 41
>gi|256850685|ref|ZP_05556110.1| Lj928 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
gi|256712553|gb|EEU27549.1| Lj928 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
Length = 294
Score = 34.2 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
M+D+ F+ E+ P+RI+ E+ WF+ KD+ L +T
Sbjct: 1 MNDLEFFDFENQPVRILKIENEP-WFVGKDLTNILGYT 37
>gi|254361489|ref|ZP_04977628.1| possible bacteriophage antirepressor [Mannheimia haemolytica
PHL213]
gi|153093003|gb|EDN74024.1| possible bacteriophage antirepressor [Mannheimia haemolytica
PHL213]
Length = 225
Score = 34.2 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN + +R+++D + WF DV L + +
Sbjct: 10 FNFNSSAVRVIIDPNQEPWFCGADVCRILGYVN 42
>gi|288573073|ref|ZP_06391430.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568814|gb|EFC90371.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 370
Score = 34.2 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
SD+ F E +R+V DGN W++ KDV L ++T
Sbjct: 112 SDVTLFEFERMVVRVVF-IDGNPWWVAKDVCDILSLGNVT 150
>gi|312873812|ref|ZP_07733856.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
gi|311090693|gb|EFQ49093.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
Length = 252
Score = 34.2 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
FN E+N +R + + DG +F+ KD+A L +++
Sbjct: 9 FNFENNEVRTL-NIDGKPYFVGKDIAAVLGYSN 40
>gi|300765043|ref|ZP_07075031.1| hypothetical protein LMHG_11509 [Listeria monocytogenes FSL
N1-017]
gi|300514343|gb|EFK41402.1| hypothetical protein LMHG_11509 [Listeria monocytogenes FSL
N1-017]
Length = 154
Score = 34.2 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E N +R V E+ + F+ KDVA L +++
Sbjct: 1 MSNLQIFNFEGNEVRTVFIENEPH-FIGKDVAKVLGYSN 38
>gi|145642457|ref|ZP_01798009.1| hypothetical protein CGSHiR3021_00482 [Haemophilus influenzae
R3021]
gi|145272850|gb|EDK12744.1| hypothetical protein CGSHiR3021_00482 [Haemophilus influenzae
22.4-21]
Length = 67
Score = 34.2 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
F + N +R++ D + WF DV L +++
Sbjct: 10 FTFKSNSVRVITDNNREPWFCANDVCDILGYSN 42
>gi|284800079|ref|ZP_05985661.2| putative antirepressor protein encoded by prophage protein
[Neisseria subflava NJ9703]
gi|284796123|gb|EFC51470.1| putative antirepressor protein encoded by prophage protein
[Neisseria subflava NJ9703]
Length = 322
Score = 34.2 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
+ + FN N I+ V++++G WF+ +VA L +
Sbjct: 45 NSVQSFNFNQNQIQ-VINKNGEAWFIASEVAAMLGY 79
>gi|332344336|gb|AEE57670.1| Anti-repressor protein [Escherichia coli UMNK88]
Length = 236
Score = 33.8 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 7 FNLEH-NPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
F E NPIR ++ DG WF+ +DV L ++T
Sbjct: 9 FKFESVNPIRSII-IDGQPWFVAQDVCSALRIQNVT 43
>gi|298381702|ref|ZP_06991301.1| anti-repressor protein [Escherichia coli FVEC1302]
gi|298279144|gb|EFI20658.1| anti-repressor protein [Escherichia coli FVEC1302]
Length = 241
Score = 33.8 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 7 FNLEH-NPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
F E NPIR ++ DG WF+ +DV L ++T
Sbjct: 14 FKFESVNPIRSII-IDGQPWFVAQDVCSALRIQNVT 48
>gi|167462755|ref|ZP_02327844.1| putative phage antirepressor protein [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 264
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+ + FN +R+VV +DG+ W++ KDV+ L F
Sbjct: 14 MNQLQVFNFTGKDVRVVV-KDGHPWWVAKDVSELLGF 49
>gi|291457579|ref|ZP_06596969.1| toxin-antitoxin system, toxin component, Bro family
[Bifidobacterium breve DSM 20213]
gi|291380632|gb|EFE88150.1| toxin-antitoxin system, toxin component, Bro family
[Bifidobacterium breve DSM 20213]
Length = 259
Score = 33.8 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
+++ F+ + +R + DE+G WF+ KDV L
Sbjct: 3 TEIQRFDFKGAALRALTDENGEPWFIAKDVCDVLG 37
>gi|254466455|ref|ZP_05079866.1| BRO family, N-terminal domain protein [Rhodobacterales bacterium
Y4I]
gi|206687363|gb|EDZ47845.1| BRO family, N-terminal domain protein [Rhodobacterales bacterium
Y4I]
Length = 252
Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 7 FNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
F+ +R VV DG+ WF+ KDV L
Sbjct: 14 FDFNTKQVR-VVSRDGSPWFVAKDVCDALG 42
>gi|300312121|ref|YP_003776213.1| prophage antirepressor protein [Herbaspirillum seropedicae SmR1]
gi|300074906|gb|ADJ64305.1| prophage antirepressor protein [Herbaspirillum seropedicae SmR1]
Length = 48
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 5 IPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTS 39
IPF+ E IR++ E F+ KD+ LD+++
Sbjct: 4 IPFHFEGRDIRVLASESSEPLFVGKDICEALDYSN 38
>gi|288572745|ref|ZP_06391102.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568486|gb|EFC90043.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 376
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFTSIT 41
SD+ F E +R+V +GN W++ KDV L + ++
Sbjct: 118 SDVTLFEFERMVVRVVF-INGNPWWVAKDVCDVLGLSDVS 156
>gi|294795001|ref|ZP_06760136.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
sp. 3_1_44]
gi|294454363|gb|EFG22737.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
sp. 3_1_44]
Length = 256
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
M+D+ FN + ++++D WF+ KDVA L +
Sbjct: 1 MTDLQIFNNDTFGQVRILEKDNELWFVAKDVADTLGY 37
>gi|326562741|gb|EGE13040.1| BRO family protein [Moraxella catarrhalis 103P14B1]
Length = 150
Score = 33.8 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 1 MSDMIPFNLEHNP-IRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E +R + G+ WF + DVA L ++
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISN 40
>gi|213692400|ref|YP_002322986.1| phage antirepressor protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523861|gb|ACJ52608.1| phage antirepressor protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458542|dbj|BAJ69163.1| putative phage antirepressor [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 259
Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 2 SDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLD 36
+++ F+ + +R + DE G WF+ KDV L
Sbjct: 3 TEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILG 37
>gi|326574475|gb|EGE24417.1| BRO family protein [Moraxella catarrhalis 101P30B1]
Length = 292
Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 1 MSDMIPFNLEHNP-IRIVVDEDGNYWFMVKDVAGGLDFTS 39
MS++ FN E +R + G+ WF + DVA L ++
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISN 40
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.138 0.411
Lambda K H
0.267 0.0433 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 800,409,387
Number of Sequences: 14124377
Number of extensions: 18859151
Number of successful extensions: 47443
Number of sequences better than 10.0: 191
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 47205
Number of HSP's gapped (non-prelim): 266
length of query: 41
length of database: 4,842,793,630
effective HSP length: 15
effective length of query: 26
effective length of database: 4,630,927,975
effective search space: 120404127350
effective search space used: 120404127350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 76 (33.8 bits)