RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780556|ref|YP_003064969.1| hypothetical protein
CLIBASIA_02215 [Candidatus Liberibacter asiaticus str. psy62]
         (120 letters)



>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces
          cerevisiae} (A:43-91,A:299-351,A:394-412)
          Length = 121

 Score = 24.7 bits (54), Expect = 4.4
 Identities = 6/21 (28%), Positives = 8/21 (38%)

Query: 32 LRMVKEAKMEVLEAHKLAKEY 52
          L  VK A+  +        EY
Sbjct: 7  LPSVKAAEKLIHNDSSYNHEY 27


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.314    0.129    0.334 

Gapped
Lambda     K      H
   0.267   0.0560    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 761,958
Number of extensions: 29642
Number of successful extensions: 177
Number of sequences better than 10.0: 1
Number of HSP's gapped: 176
Number of HSP's successfully gapped: 39
Length of query: 120
Length of database: 4,956,049
Length adjustment: 72
Effective length of query: 48
Effective length of database: 2,522,089
Effective search space: 121060272
Effective search space used: 121060272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.4 bits)