HHsearch alignment for GI: 254780557 and conserved domain: cd03426
>cd03426 CoAse Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.
Probab=99.61 E-value=3.3e-15 Score=109.00 Aligned_cols=113 Identities=22% Similarity=0.231 Sum_probs=75.2
Q ss_pred CEEEEEEECCCC--CEEEEEECCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
Q ss_conf 606999984898--39999926887766687220121150788-888899999999983755222220136612411632
Q gi|254780557|r 4 RGVGILILNQDD--LVWVGRRCFHDNNKHLSLWQMPQGGINPQ-EDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPA 80 (160)
Q Consensus 4 ~~V~vvi~n~~~--~iLl~kR~~~~~~~~~g~W~~PgG~ve~g-Et~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~ 80 (160)
T Consensus 3 AaVli~l~~~~~~~~ill~kRs~~l~-~h~GqisfPGG~~e~~D~~~~~tAlREt~EEiGl~~~~~~~lg------~L~~ 75 (157)
T cd03426 3 AAVLVLLVEREGELRVLLTKRASHLR-SHPGQVAFPGGKVDPGDEDPVATALREAEEEIGLPPDSVEVLG------RLPP 75 (157)
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCC-CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE------ECCC
T ss_conf 38999999879967999998267667-7898483799602766533899999999998689911338986------3487
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHC
Q ss_conf 220000112344337999980475430105788888886003760378997630
Q gi|254780557|r 81 HCIQENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNI 134 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~ 134 (160)
T Consensus 76 ~~t~----s~~~V~PfV~~~~~-~~~~~~------~~~EV~~vf~vPL~~ll~~ 118 (157)
T cd03426 76 YYTR----SGFVVTPVVGLVPP-PLPLVL------NPDEVAEVFEVPLSFLLDP 118 (157)
T ss_pred CCCC----CCCEEEEEEEEECC-CCCCCC------CHHHHHHHHHCCHHHHHCC
T ss_conf 1325----98489999999479-876579------8489788814059997397