HHsearch alignment for GI: 254780557 and conserved domain: cd03429
>cd03429 NADH_pyrophosphatase NADH pyrophosphatase, a member of the Nudix hydrolase superfamily, catalyzes the cleavage of NADH into reduced nicotinamide mononucleotide (NMNH) and AMP. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for activity. Members of this family are also recognized by the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. A block of 8 conserved amino acids downstream of the nudix motif is thought to give NADH pyrophosphatase its specificity for NADH. NADH pyrophosphatase forms a dimer.
Probab=99.75 E-value=1.2e-18 Score=129.00 Aligned_cols=123 Identities=20% Similarity=0.269 Sum_probs=82.9
Q ss_pred CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 60699998489839999926887766687220121150788888899999999983755222220136612411632220
Q gi|254780557|r 4 RGVGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPAHCI 83 (160)
Q Consensus 4 ~~V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~~~~ 83 (160)
T Consensus 1 P~Vi~~V~~~~~~iLL~r~~~~~----~g~~~~~aG~ve~GEs~e~a~~REv~EE~gv~v~~i~y~~------sqpwpf- 69 (131)
T cd03429 1 PAVIVLVIDGGDRILLARQPRFP----PGMYSLLAGFVEPGESLEEAVRREVKEEVGIRVKNIRYVG------SQPWPF- 69 (131)
T ss_pred CEEEEEEEECCCEEEEECCCCCC----CCCEECCEEEECCCCCHHHCEEEEEEEEECCEECCEEEEE------ECCCCC-
T ss_conf 97999999489889997056799----9959466266439999799118989987177022169988------758799-
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHC-----CHHCCHHHHHHHHHHH
Q ss_conf 000112344337999980475430105788888886003760378997630-----0001379999999999
Q gi|254780557|r 84 QENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNI-----VVDFKKEAYRQVVADF 150 (160)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~-----i~~fk~~vy~~~l~~l 150 (160)
T Consensus 70 -----p~~Lm~~f~a~~~~--~e~~~------~~~Ei~earWfs~del~~~~~~~~~~p~~~sIA~~li~~w 128 (131)
T cd03429 70 -----PSSLMLGFTAEADS--GEIVV------DDDELEDARWFSRDEVRAAGEGLPELPPPGSIARQLIEAW 128 (131)
T ss_pred -----CCEEEEEEEEEECC--CCCCC------CHHHEEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf -----88689999999769--97669------9316216776769998663328877899210999999998