HHsearch alignment for GI: 254780557 and conserved domain: cd04671
>cd04671 Nudix_Hydrolase_13 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=99.88 E-value=1.6e-22 Score=151.54 Aligned_cols=109 Identities=23% Similarity=0.180 Sum_probs=75.3
Q ss_pred EEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 06999984898399999268877666872201211507888888999999999837552222201366124116322200
Q gi|254780557|r 5 GVGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPAHCIQ 84 (160)
Q Consensus 5 ~V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~~~~~ 84 (160)
T Consensus 2 vV~avi~~~~g~vLLv~r~~~---~~~g~W~lPGG~vE~GEt~eeaa~REv~EETGl~v~~~~l~~----v~-------~ 67 (123)
T cd04671 2 IVAAVILNNQGEVLLIQEAKR---SCRGKWYLPAGRMEPGETIEEAVKREVKEETGLDCEPTTLLS----VE-------E 67 (123)
T ss_pred EEEEEEEECCCEEEEEEECCC---CCCCEEECCEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEE----EE-------E
T ss_conf 899999988998999996589---999959798018049989999999999997498889777999----99-------2
Q ss_pred CCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHC
Q ss_conf 00112344337999980475430105788888886003760378997630
Q gi|254780557|r 85 ENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNI 134 (160)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~ 134 (160)
T Consensus 68 --~~~~~~~~~f~~~~~~G----~l~~~-~~~~~E~~ea~Wf~~deLP~p 110 (123)
T cd04671 68 --QGGSWFRFVFTGNITGG----DLKTE-KEADSESLQARWYSNKDLPLP 110 (123)
T ss_pred --CCCEEEEEEEEEEEECC----EECCC-CCCCCCEEEEEEECHHHCCCC
T ss_conf --69809999999999276----51168-999987799899888998687