HHsearch alignment for GI: 254780557 and conserved domain: cd04690
>cd04690 Nudix_Hydrolase_31 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=99.85 E-value=3.7e-21 Score=143.62 Aligned_cols=108 Identities=26% Similarity=0.286 Sum_probs=71.1
Q ss_pred EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 69999848983999992688776668722012115078888889999999998375522222013661241163222000
Q gi|254780557|r 6 VGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPAHCIQE 85 (160)
Q Consensus 6 V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~~~~~~ 85 (160)
T Consensus 3 ~~a~v~~~~grvLl~rr~~------~~~W~lPGG~vE~gEt~~~a~~REl~EE~Gl~v~~~~l~~~~--~~~~~~~--~~ 72 (118)
T cd04690 3 AAALILVRDGRVLLVRKRG------TDVFYLPGGKIEAGETPLQALIRELSEELGLDLDPDSLEYLG--TFRAPAA--NE 72 (118)
T ss_pred EEEEEEECCCEEEEEEECC------CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCEEEEEE--EEEECCC--CC
T ss_conf 9999998999899999779------994989963765997999999999989759498602079989--9972166--79
Q ss_pred CCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHC
Q ss_conf 0112344337999980475430105788888886003760378997630
Q gi|254780557|r 86 NGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNI 134 (160)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~ 134 (160)
T Consensus 73 ~-~~~~~~~~~~~~~~g~~----------~~~~E~~e~~Wv~~~el~~~ 110 (118)
T cd04690 73 P-GVDVRATVYVAELTGEP----------VPAAEIEEIRWVDYDDPADD 110 (118)
T ss_pred C-CEEEEEEEEEEEEECCC----------CCCCCCCCEEEECHHHCCCC
T ss_conf 9-98999999999981884----------57863100299579897689