RPSBLAST alignment of GI: 254780557 and protein with PDBid: 1vcd
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, hydrolase, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus HB8} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A* Length = 126
Score = 52.7 bits (126), Expect = 4e-08
Identities = 26/131 (19%), Positives = 43/131 (32%), Gaps = 26/131 (19%)
Query: 5 GVGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSI 64
G G ++ N V + R + W P+G P E +AA RE++EETG+++
Sbjct: 4 GAGGVVFNAKREVLLLRD-------RMGFWVFPKGHPEPGESLEEAAVREVWEETGVRAE 56
Query: 65 SLLGQGDSYIQYDFPAHCIQENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWT 124
+ V + WF R +G E
Sbjct: 57 ---------VLLPLYPTRYVNPKGVEREVHWFLMRGEGAPRL----------EEGMTGAG 97
Query: 125 WVSLWDTPNIV 135
W S + ++
Sbjct: 98 WFSPEEARALL 108