HHsearch results for GI: 254780558 and protein with PDBid: 2j13_A
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=98.48 E-value=1.8e-06 Score=59.15 Aligned_cols=183 Identities=13% Similarity=0.052 Sum_probs=110.6
Q ss_pred CEEEEEECCCCCCCHHH---HHHHHHCCCCCEEEEEC-CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 65899973778771688---99998379350898708-987689999999985992999817665689877878554467
Q gi|254780558|r 171 ARIAIVVSGLGISQTGT---QRAINLLPANITLAFAS-NGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKV 246 (396)
Q Consensus 171 ~riAIVIddlG~~~~~~---~~ai~~LP~~vT~A~~P-~~~~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~~ 246 (396)
-.|+|-+|| |+...-| .+.+.+.-.+.||-+.- +.....+.+++..+.||||--|- |...+ +.
T Consensus 55 k~V~LTFDD-G~~~~~t~~iLd~Lk~~~vkATFFv~g~~i~~~p~~~~~~~~~GheIgnHt------~~H~~------l~ 121 (247)
T 2j13_A 55 KDIYLTFDN-GYENGYTGKILDVLKEKKVPATFFVTGHYIKTQKDLLLRMKDEGHIIGNHS------WSHPD------FT 121 (247)
T ss_dssp CEEEEEEEE-SSCCSCHHHHHHHHHHHTCCEEEEECHHHHHHCHHHHHHHHHTTCEEEECC------SSCCC------GG
T ss_pred CEEEEEEEC-CCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHHHHHHCCCEEEECC------CCCCC------CC
T ss_conf 989998748-998564999999999869839999866245669999999985798897221------45787------43
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCE
Q ss_conf 8998999999999998558935980-----01230000498999999999850692899749763226789898709946
Q gi|254780558|r 247 TQTVQQLLNRLRYSLRRGTGYFGVM-----NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY 321 (396)
Q Consensus 247 ~~~~~~~~~~l~~~l~~~p~~vGvn-----NhmGs~~t~~~~~m~~vl~~l~~rgL~flDs~Ts~~Sva~~~A~~~gvp~ 321 (396)
.++.+++++-|..+...+-...|.. -.-++.+ ++. +++.+++.|+-.+.- |+
T Consensus 122 ~ls~~~~~~ei~~~~~~l~~~~G~~~~~~~rpP~G~~--~~~----~~~~~~~~Gy~~v~w-----s~------------ 178 (247)
T 2j13_A 122 AVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVF--SER----TLALTKEMGYYNVFW-----SL------------ 178 (247)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHCCSCCCEECCGGGEE--CHH----HHHHHHHTTCEEECC-----SE------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--CHH----HHHHHHHCCCEEEEC-----CC------------
T ss_conf 2328999999999999999986899888777887776--989----999999869978747-----62------------
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC-CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCC
Q ss_conf 984588628999999999999999999871948999808-8788999999975688769189967774306478
Q gi|254780558|r 322 MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA-FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394 (396)
Q Consensus 322 ~~~dvfLD~~~~~~~I~~qL~~l~~~Ar~~G~AI~igh~-~p~Ti~~L~~w~~~l~~~gi~lVpvS~l~~~~~~ 394 (396)
...|--.|...+...|.+++.+ ..+.|. |.+.|. .+.|+++|...++.++++|+++|++++|++-.-|
T Consensus 179 d~~Dw~~~~~~~~~~~~~~v~~----~~~~G~-IiLlHd~~~~t~~aL~~iI~~lk~~Gy~fvtl~ell~~~~p 247 (247)
T 2j13_A 179 AFLDWKVDEQRGWQYAHNNVMT----MIHPGS-ILLLHAISKDNAEALAKIIDDLREKGYHFKSLDDLVKSNQP 247 (247)
T ss_dssp ECCCC----------------------CCTTB-EEEECCCSTTHHHHHHHHHHHHHHTTCEEECHHHHHHTC--
T ss_pred CCCCCCCCCCHHHHHHHHHHHH----CCCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCC
T ss_conf 4687876553579999999994----379996-89971899479999999999999789999887996257998