HHsearch results for GI: 254780558 and protein with PDBid: 2nly_A

>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical protein; PFAM04748, structural genomics, PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=100.00  E-value=0  Score=311.23  Aligned_cols=222  Identities=20%  Similarity=0.314  Sum_probs=212.2

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             86589997377877168899998379350898708987689999999985992999817665689877878554467899
Q gi|254780558|r  170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT  249 (396)
Q Consensus       170 ~~riAIVIddlG~~~~~~~~ai~~LP~~vT~A~~P~~~~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~~~~~  249 (396)
                      ..+|||+|||+|++...+.+ |.+++.++||+|+|+.++..++++++++.||||++|+||+|..+..+++++++|..+++
T Consensus         3 ~K~vALt~DD~G~~~~~~~~-ll~~~v~aTffv~~~~~~~~~~~~~~~~~Ghei~~H~~~h~~~~~~~~~~~~~l~~~~~   81 (245)
T 2nly_A            3 MKRAAIIIDDFGGDVKGVDD-FLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLS   81 (245)
T ss_dssp             CEEEEEEEEEESSCCTTHHH-HHTCSSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTTCC
T ss_pred             CCEEEEEEECCCCCHHHHHH-HHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             77899999469999578999-97389987999868985668999999986996788646565545556666554653159


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEC
Q ss_conf             89999999999985589359800123000049899999999985069289974976322678989870994698458862
Q gi|254780558|r  250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD  329 (396)
Q Consensus       250 ~~~~~~~l~~~l~~~p~~vGvnNhmGs~~t~~~~~m~~vl~~l~~rgL~flDs~Ts~~Sva~~~A~~~gvp~~~~dvfLD  329 (396)
                      .+||++.+.++++++++++|+||||||++|++...|+.+++.+++++++|.|+.+..++.+..++++.|+++..+++|+|
T Consensus        82 ~~ei~~~l~~~~~~i~~a~g~~~~~~s~~t~~~~~~~~~~~~~~~~~~~frp~~~~~~~~~~~~a~~~G~~~~~~~v~~~  161 (245)
T 2nly_A           82 VGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLD  161 (245)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECCCCSSCSHHHHHHHTTCCEEECCEESC
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEEEEECC
T ss_conf             99999999998764634415424654433267788999999747587066079886247899999987971899997337


Q ss_pred             C-CCCHHHHHHHHHHHHHHHHHCCEEEEEEE---CCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCC
Q ss_conf             8-99999999999999999987194899980---887889999999756887691899677743064
Q gi|254780558|r  330 D-QVDRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS  392 (396)
Q Consensus       330 ~-~~~~~~I~~qL~~l~~~Ar~~G~AI~igh---~~p~Ti~~L~~w~~~l~~~gi~lVpvS~l~~~~  392 (396)
                      + ..+...+.+++.++...|+..|.+|.|+|   +++.|+++|..|++.|+++|++||+||+|+...
T Consensus       162 d~~~~~~~~~~~~~~~~~~a~~~g~~IvL~H~~~~~~~T~eaL~~~i~~L~~~Gy~fVtlsell~~p  228 (245)
T 2nly_A          162 NTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQLLPSP  228 (245)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHTTSCCEEEEECSTTHHHHHHHHGGGHHHHHHTTEEECCGGGGCC--
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCH
T ss_conf             5544427899999999997441797289974799956799999999999997991999879940660