HHsearch results for GI: 254780558 and protein with PDBid: 2nly_A
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical protein; PFAM04748, structural genomics, PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=100.00 E-value=0 Score=311.23 Aligned_cols=222 Identities=20% Similarity=0.314 Sum_probs=212.2
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86589997377877168899998379350898708987689999999985992999817665689877878554467899
Q gi|254780558|r 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249 (396)
Q Consensus 170 ~~riAIVIddlG~~~~~~~~ai~~LP~~vT~A~~P~~~~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~~~~~ 249 (396)
..+|||+|||+|++...+.+ |.+++.++||+|+|+.++..++++++++.||||++|+||+|..+..+++++++|..+++
T Consensus 3 ~K~vALt~DD~G~~~~~~~~-ll~~~v~aTffv~~~~~~~~~~~~~~~~~Ghei~~H~~~h~~~~~~~~~~~~~l~~~~~ 81 (245)
T 2nly_A 3 MKRAAIIIDDFGGDVKGVDD-FLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLS 81 (245)
T ss_dssp CEEEEEEEEEESSCCTTHHH-HHTCSSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTTCC
T ss_pred CCEEEEEEECCCCCHHHHHH-HHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77899999469999578999-97389987999868985668999999986996788646565545556666554653159
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEC
Q ss_conf 89999999999985589359800123000049899999999985069289974976322678989870994698458862
Q gi|254780558|r 250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329 (396)
Q Consensus 250 ~~~~~~~l~~~l~~~p~~vGvnNhmGs~~t~~~~~m~~vl~~l~~rgL~flDs~Ts~~Sva~~~A~~~gvp~~~~dvfLD 329 (396)
.+||++.+.++++++++++|+||||||++|++...|+.+++.+++++++|.|+.+..++.+..++++.|+++..+++|+|
T Consensus 82 ~~ei~~~l~~~~~~i~~a~g~~~~~~s~~t~~~~~~~~~~~~~~~~~~~frp~~~~~~~~~~~~a~~~G~~~~~~~v~~~ 161 (245)
T 2nly_A 82 VGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLD 161 (245)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECCCCSSCSHHHHHHHTTCCEEECCEESC
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEEEEECC
T ss_conf 99999999998764634415424654433267788999999747587066079886247899999987971899997337
Q ss_pred C-CCCHHHHHHHHHHHHHHHHHCCEEEEEEE---CCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCC
Q ss_conf 8-99999999999999999987194899980---887889999999756887691899677743064
Q gi|254780558|r 330 D-QVDRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392 (396)
Q Consensus 330 ~-~~~~~~I~~qL~~l~~~Ar~~G~AI~igh---~~p~Ti~~L~~w~~~l~~~gi~lVpvS~l~~~~ 392 (396)
+ ..+...+.+++.++...|+..|.+|.|+| +++.|+++|..|++.|+++|++||+||+|+...
T Consensus 162 d~~~~~~~~~~~~~~~~~~a~~~g~~IvL~H~~~~~~~T~eaL~~~i~~L~~~Gy~fVtlsell~~p 228 (245)
T 2nly_A 162 NTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQLLPSP 228 (245)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTTSCCEEEEECSTTHHHHHHHHGGGHHHHHHTTEEECCGGGGCC--
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCH
T ss_conf 5544427899999999997441797289974799956799999999999997991999879940660