HHSEARCH alignment of GI: 254780558 and SCOP domain: d1xw8a_

Alignment
>d1xw8a_ c.6.2.5 (A:) Hypothetical protein YbgL {Escherichia coli [TaxId: 562]}
Probab=95.12  E-value=0.086  Score=28.11  Aligned_cols=193  Identities=12%  Similarity=0.091  Sum_probs=128.1

Q ss_pred             CCCCCCCHHHHHHHHHCCCCCEEEEECCC---C---CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             37787716889999837935089870898---7---68999999998599299981766568987787855446789989
Q gi|254780558|r  178 SGLGISQTGTQRAINLLPANITLAFASNG---N---SLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQ  251 (396)
Q Consensus       178 ddlG~~~~~~~~ai~~LP~~vT~A~~P~~---~---~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~~~~~~~  251 (396)
                      -|||.+. +..++|+.+   ||-|=+.-+   -   .-++.++.|.+.|-.|=-|-     +||+.+ |=+=-...++++
T Consensus         7 ~DlGE~~-g~D~~lm~~---i~saNIACG~HaGd~~~m~~tv~lA~~~~V~iGAHP-----sypD~~-gFGRr~~~~s~~   76 (247)
T d1xw8a_           7 ADLGEGC-ASDAELLTL---VSSANIACGFHAGDAQIMQACVREAIKNGVAIGAHP-----SFPDRE-NFGRSAMQLPPE   76 (247)
T ss_dssp             EEESSSC-SCHHHHHHH---CSEEEEECSSSSCCHHHHHHHHHHHHHHTCEEEEEC-----CCC--------CCCCCCHH
T ss_pred             CCCCCCC-CCHHHHHHH---HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-----CCCCHH-CCCCCCCCCCHH
T ss_conf             4468886-888999867---636888606456779999999999998399743789-----988610-067556889999


Q ss_pred             HHHHHHHHHHHHCCCC--------EEEEECCCCC---CCCCHHHHHHHHHHHHCC--CCEEEECCCCCCCHHHHHHHHHC
Q ss_conf             9999999999855893--------5980012300---004989999999998506--92899749763226789898709
Q gi|254780558|r  252 QLLNRLRYSLRRGTGY--------FGVMNYRGAM---LLSNKESAEVIFKEFAKR--GLLFFDDGSSPRNLTRVLAPKLN  318 (396)
Q Consensus       252 ~~~~~l~~~l~~~p~~--------vGvnNhmGs~---~t~~~~~m~~vl~~l~~r--gL~flDs~Ts~~Sva~~~A~~~g  318 (396)
                      |+.+.+.+-++.+-..        ..|--| |..   ...|+...+.+++.++..  +|.++   ..+.|...+.|++.|
T Consensus        77 el~~~v~~Qi~al~~~~~~~g~~l~hvKpH-GALYn~~~~d~~lA~~i~~ai~~~~~~l~l~---~~~~s~~~~~A~~~G  152 (247)
T d1xw8a_          77 TVYAQTLYQIGALATIARAQGGVMRHVKPH-GMLYNQAAKEAQLADAIARAVYACDPALILV---GLAGSELIRAGKQYG  152 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEECCC-HHHHHHHTTCHHHHHHHHHHHHHHCTTCEEE---EETTSHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEEECHH-HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHC---CCCCCHHHHHHHHCC
T ss_conf             999999999999999999859824563344-9998775046899999999999848324430---478859999998749


Q ss_pred             CCEEEEEEEECCCCCH----------H----HHHHHHHHHHHHHHHC------CEEEE-----EE--ECCHHHHHHHHHH
Q ss_conf             9469845886289999----------9----9999999999999871------94899-----98--0887889999999
Q gi|254780558|r  319 LPYMVADLYLDDQVDR----------D----KIREKLKGLEEIARTT------GQAIG-----VA--VAFDESIEVISQW  371 (396)
Q Consensus       319 vp~~~~dvfLD~~~~~----------~----~I~~qL~~l~~~Ar~~------G~AI~-----ig--h~~p~Ti~~L~~w  371 (396)
                      +++.. ..|.|-.-+.          .    .....+++..++++.+      |.-|-     ||  .-.|..++.++..
T Consensus       153 l~~~~-E~FADR~Y~~dG~Lv~R~~~gAvi~d~~~~~~qv~~m~~~g~V~ti~G~~I~l~adTICVHGDtp~Av~~ak~I  231 (247)
T d1xw8a_         153 LTTRE-EVFADRGYQADGSLVPRSQSGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLHGDGEHALAFARRL  231 (247)
T ss_dssp             CCEEE-EECTTSCBCTTSSBCCTTTCC-----CTTHHHHHHHHHHHSEEECTTSCEEECCCCEEECCCCC-CCHHHHHHH
T ss_pred             CCEEE-EEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCEECCCCCEEEECCCCHHHHHHHHHH
T ss_conf             96423-33102433776341211355456689799999999999779878678998107889798799997899999999


Q ss_pred             HHHHHHCCCEEEEH
Q ss_conf             75688769189967
Q gi|254780558|r  372 LQQEHVRDVSVVPL  385 (396)
Q Consensus       372 ~~~l~~~gi~lVpv  385 (396)
                      -..|++.||++.|+
T Consensus       232 r~~L~~~gI~I~~~  245 (247)
T d1xw8a_         232 RSAFAEKGIVVAAL  245 (247)
T ss_dssp             HHHC----CCBCCC
T ss_pred             HHHHHHCCCEEECC
T ss_conf             99999889989518


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: LamB/YcsF-like
domain: Hypothetical protein YbgL
species: Escherichia coli [TaxId: 562]