HHSEARCH alignment of GI: 254780558 and SCOP domain: d2dfaa1

Alignment
>d2dfaa1 c.6.2.5 (A:1-250) Hypothetical protein TTHB195 {Thermus thermophilus [TaxId: 274]}
Probab=94.92  E-value=0.11  Score=27.50  Aligned_cols=191  Identities=16%  Similarity=0.136  Sum_probs=124.2

Q ss_pred             CCCCCCC----HHHHHHHHHCCCCCEEEEECCC---C---CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3778771----6889999837935089870898---7---6899999999859929998176656898778785544678
Q gi|254780558|r  178 SGLGISQ----TGTQRAINLLPANITLAFASNG---N---SLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT  247 (396)
Q Consensus       178 ddlG~~~----~~~~~ai~~LP~~vT~A~~P~~---~---~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~~~  247 (396)
                      -|||.+.    .+.+++|+  |+ ||-|=+.-+   -   .-++.++.|++.|-.|=-|-     +||+.+ |=+=-...
T Consensus         7 ~DlGE~~g~~~~g~D~~lm--~~-i~saNIACG~HaGD~~~m~~tv~lA~~~~V~IGAHP-----sypD~~-gFGRr~~~   77 (250)
T d2dfaa1           7 ADAGESYGAFAYGHDREIF--PL-VSSANLACGFHGGSPGRILEAVRLAKAHGVAVGAHP-----GFPDLV-GFGRREMA   77 (250)
T ss_dssp             EEECCCBTTBCCSCHHHHT--TT-CSEEEEECSSSSCCHHHHHHHHHHHHHTTCEEEEEC-----CCSCTT-TTTCSCCC
T ss_pred             CCCCCCCCCCCCCCHHHHH--HH-HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-----CCCCHH-HCCCCCCC
T ss_conf             0168887887778809998--67-635777517446779999999999998298401688-----976243-35887678


Q ss_pred             CCHHHHHHHHHHHHHHCCCC---EEE-EECC---CC---CCCCCHHHHHHHHHHHHCC--CCEEEECCCCCCCHHHHHHH
Q ss_conf             99899999999999855893---598-0012---30---0004989999999998506--92899749763226789898
Q gi|254780558|r  248 QTVQQLLNRLRYSLRRGTGY---FGV-MNYR---GA---MLLSNKESAEVIFKEFAKR--GLLFFDDGSSPRNLTRVLAP  315 (396)
Q Consensus       248 ~~~~~~~~~l~~~l~~~p~~---vGv-nNhm---Gs---~~t~~~~~m~~vl~~l~~r--gL~flDs~Ts~~Sva~~~A~  315 (396)
                      ++++++.+.+..-+..+-..   .|+ .+|.   |.   ....|+...+.+++.++..  +|.++   +-+.|.-.++|+
T Consensus        78 ~s~~el~~~i~~Qi~al~~~a~~~g~~l~hVKpHGALYn~~~~d~~lA~~i~~ai~~~~~~l~l~---~~~~s~~~~~a~  154 (250)
T d2dfaa1          78 LSPEEVYADVLYQIGALSAFLKAEGLPLHHVKPHGALYLKACRDRETARAIALAVKAFDPGLPLV---VLPGTVYEEEAR  154 (250)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCCEE---ECTTSHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE---ECCCHHHHHHHH
T ss_conf             99899999999999999999998399414532018876456508899999999998618885388---507515787776


Q ss_pred             HHCCCEEEEEEEECCCC-----------------CHHHHHHHHHHHHHHHHHC------CE-------EEEEEECCHHHH
Q ss_conf             70994698458862899-----------------9999999999999999871------94-------899980887889
Q gi|254780558|r  316 KLNLPYMVADLYLDDQV-----------------DRDKIREKLKGLEEIARTT------GQ-------AIGVAVAFDESI  365 (396)
Q Consensus       316 ~~gvp~~~~dvfLD~~~-----------------~~~~I~~qL~~l~~~Ar~~------G~-------AI~igh~~p~Ti  365 (396)
                      +.|+++.. ..|.|..-                 +++.+   +++..++++++      |.       -|-|-.-.|+.+
T Consensus       155 ~~Gl~~~~-E~FADR~Y~~dG~LvpR~~~gAvi~d~~~~---~~qv~~~~~~~~V~t~~G~~i~i~adTICVHgDtp~Av  230 (250)
T d2dfaa1         155 KAGLRVVL-EAFPERAYLRSGQLAPRSMPGSWITDPEEA---ARRALRMVLEGKVEALDGGEVAVRADTLCIHGDNPNAP  230 (250)
T ss_dssp             HTTCCEEE-EECTTBCBCTTSSBCCTTSTTCBCCCHHHH---HHHHHHHHHTSEEEBTTSSEEECCCSEEEEC---CCHH
T ss_pred             HCCCCEEE-EEEECCCCCCCCCEEEECCCCCCCCCHHHH---HHHHHHHHHCCCEEECCCCEEECCCCEEEECCCCHHHH
T ss_conf             46983566-774044488999789852676535786999---99999999789879068988525689899789997799


Q ss_pred             HHHHHHHHHHHHCCCEEEE
Q ss_conf             9999997568876918996
Q gi|254780558|r  366 EVISQWLQQEHVRDVSVVP  384 (396)
Q Consensus       366 ~~L~~w~~~l~~~gi~lVp  384 (396)
                      +.++..-..|++.||++.|
T Consensus       231 ~~ak~ir~~L~~~gi~I~~  249 (250)
T d2dfaa1         231 EVARAVREALEQAGVEVRA  249 (250)
T ss_dssp             HHHHHHHHHHHTTTCEECC
T ss_pred             HHHHHHHHHHHHCCCEEEC
T ss_conf             9999999999988696816


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: LamB/YcsF-like
domain: Hypothetical protein TTHB195
species: Thermus thermophilus [TaxId: 274]