BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780558|ref|YP_003064971.1| hypothetical protein
CLIBASIA_02225 [Candidatus Liberibacter asiaticus str. psy62]
(396 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780558|ref|YP_003064971.1| hypothetical protein CLIBASIA_02225 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040235|gb|ACT57031.1| hypothetical protein CLIBASIA_02225 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 396
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/396 (100%), Positives = 396/396 (100%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY
Sbjct: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT
Sbjct: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL
Sbjct: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD
Sbjct: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
Query: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF
Sbjct: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
Query: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA
Sbjct: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS
Sbjct: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
>gi|315121752|ref|YP_004062241.1| hypothetical protein CKC_00010 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495154|gb|ADR51753.1| hypothetical protein CKC_00010 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 354
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/364 (62%), Positives = 266/364 (73%), Gaps = 25/364 (6%)
Query: 37 IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCN--Q 94
I GLSIYIL+S+A +GT+SE+ PYS +RE + +PL +P+ NT + Q
Sbjct: 3 IFGLSIYILMSNALIGTVSEIGPYSFVRE----AVLVPLKNSSVANPASSPVNTAPSPTQ 58
Query: 95 LKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK----- 149
+ N + D V N+ RST +DSLPTIE RLI EL+ K K
Sbjct: 59 VVNSTDHKDA---------LVANESKRSTLLDSLPTIEGRLI---PVSELMEKTKPHLIS 106
Query: 150 VGREDTEVP-AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNS 208
V E+ V A C N SGARIAIVVS LGISQTGTQRAINLLP N+TLAFASNGNS
Sbjct: 107 VESENKSVSSAYSTRSCPNVSGARIAIVVSALGISQTGTQRAINLLPQNVTLAFASNGNS 166
Query: 209 LDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF 268
L+RWM+ AK+KGQE +LQIPMQ+F+E N DD YTLK+T++ QQLL+RLRYSLRRG GYF
Sbjct: 167 LNRWMQAAKQKGQEVMLQIPMQSFNE-LNNDDVYTLKITKSSQQLLSRLRYSLRRGKGYF 225
Query: 269 GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYL 328
GVMNYRGAM LSNK+S E IFKEFA GLLFFDDGSS RNLTRV+AP++NLPY VADLYL
Sbjct: 226 GVMNYRGAMFLSNKDSVETIFKEFAALGLLFFDDGSSSRNLTRVVAPQINLPYAVADLYL 285
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
DD VDRD IREKLK L +IAR TGQAIGVA AFDES+E IS+WLQ+EH DVS+VPLSCL
Sbjct: 286 DDVVDRDSIREKLKKLSDIARVTGQAIGVASAFDESVEEISKWLQEEHASDVSIVPLSCL 345
Query: 389 AKLS 392
KL+
Sbjct: 346 VKLA 349
>gi|307316285|ref|ZP_07595729.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
AK83]
gi|306898125|gb|EFN28867.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
AK83]
Length = 400
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 210/408 (51%), Gaps = 31/408 (7%)
Query: 1 MSIDLNHPL---RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEM 57
M+ DLN PL RK++P RK LG L +C +G I IS S +
Sbjct: 1 MATDLNAPLGQNRKESPARKR-------DLGRVLRYCGLGLGALAVIGIS-----AWSAL 48
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTV 115
P R A +P + + +PS L + +++ ++ G TV
Sbjct: 49 SPGHQTRSPA-MPAATEATLATEPAPSSEGQGNGPGALHRSGALSGAHVEDVLTDDGATV 107
Query: 116 VNKPTRSTSIDSLPTIEERLILG-------LSKKELLAKNKVGREDTEVP----AMDK-- 162
RS I+ G L + LL GR P M++
Sbjct: 108 RKYTPRSRETGGPALIDVEATRGQDPRMAALPNESLLEDRPEGRLPVIGPDGLRPMEQYA 167
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S A G RIAIVV GLG+SQTGTQRAI LP +TLAFA+ GNSL RWM+EA++ G E
Sbjct: 168 RPWSGARGTRIAIVVGGLGLSQTGTQRAIRDLPPEVTLAFAAAGNSLQRWMQEARRDGHE 227
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+LQ+PM+ FD + N+ + L+V+ + L L S+ + T Y GVMNY G LSN
Sbjct: 228 ILLQVPMEPFDYATNDPGPHALRVSSDAGKNLAELHRSMGQITNYTGVMNYLGGRFLSNA 287
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ E + ++ KRGLLF DDG+S ++L+ LA +P+ ADL LD ++ R+ + +L+
Sbjct: 288 DALEPVMRDLGKRGLLFLDDGTSAQSLSGTLAGAFEVPHGFADLVLDGELSRNAVLRRLE 347
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
LE IAR G AIGVA AFDES+ I++W ++ R + VV ++ L K
Sbjct: 348 ELERIARRNGTAIGVASAFDESVAAIAEWFEEAGGRGIEVVGVAALVK 395
>gi|15966920|ref|NP_387273.1| hypothetical protein SMc03784 [Sinorhizobium meliloti 1021]
gi|307301692|ref|ZP_07581451.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
BL225C]
gi|15076193|emb|CAC47746.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306903390|gb|EFN33979.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
BL225C]
Length = 400
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 209/408 (51%), Gaps = 31/408 (7%)
Query: 1 MSIDLNHPL---RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEM 57
M+ DLN PL RK++P RK LG L +C +G I IS S +
Sbjct: 1 MATDLNAPLGQNRKESPARKR-------DLGRVLRYCGLGLGALAVIGIS-----AWSAL 48
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTV 115
P R A +P + + +PS L + +++ ++ G TV
Sbjct: 49 SPGHQTRSPA-MPAATEATLATEPAPSSEGQGNGPGALHRSGALSGAHVEDVLTDDGATV 107
Query: 116 VNKPTRSTSIDSLPTIEERLILG-------LSKKELLAKNKVGREDTEVP----AMDK-- 162
RS I+ G L + LL GR P M++
Sbjct: 108 RKYTPRSRETGGPALIDVEATRGQDPRMAALPNESLLEDRPEGRLPVIGPDGLRPMEQYA 167
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S A G RIAIVV GLG+SQTGTQRAI LP +TLAFA+ GNSL RWM+EA++ G E
Sbjct: 168 RPWSGARGTRIAIVVGGLGLSQTGTQRAIRDLPPEVTLAFAAAGNSLQRWMQEARRDGHE 227
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+LQ+PM+ FD + N+ + L+V+ + L L S+ + T Y GVMNY G LSN
Sbjct: 228 ILLQVPMEPFDYATNDPGPHALRVSSDAGKNLAELHRSMGQITNYTGVMNYLGGRFLSNA 287
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ E + ++ KRGLLF DDG+S ++L+ LA +P+ ADL LD ++ R+ + +L
Sbjct: 288 DALEPVMRDLGKRGLLFLDDGTSAQSLSGTLAGAFEVPHGFADLVLDGELSRNAVLRRLD 347
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
LE IAR G AIGVA AFDES+ I++W ++ R + VV ++ L K
Sbjct: 348 ELERIARRNGTAIGVASAFDESVAAIAEWFEEAGGRGIEVVGVAALVK 395
>gi|209551457|ref|YP_002283374.1| hypothetical protein Rleg2_3886 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537213|gb|ACI57148.1| protein of unknown function DUF610 YibQ [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 397
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 212/408 (51%), Gaps = 36/408 (8%)
Query: 1 MSIDLNHPL---RKKTPKRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTIS 55
M DL+ PL RK +R + RLG + C F I G S+Y AF G
Sbjct: 1 MGTDLHAPLGRNRKAGSRRPG-----VLRLGRIAASLCLFAIGGFSLYT----AFRGDGL 51
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-T 114
E + P P P P N + + + ++ ++G +
Sbjct: 52 ERTKPPAEQAATP-PSNTP-------QPPTTTANQAADGMPRAEPRSGANVEQMVTGDGS 103
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT---EVP--------AMDK- 162
VV K + S P + + + +G + N+ EDT +P MD+
Sbjct: 104 VVTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPMDQY 163
Query: 163 -NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
S A G RIAIVVSGLG+SQTGTQRAI LP IT AFA++GNSL RWM+EA++ G
Sbjct: 164 ARPSSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGH 223
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
E +LQ+P++ FD N+ TL T+ V + + L ++ T Y GVMNY G LS+
Sbjct: 224 EILLQVPLEPFDYPANDPGPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSD 283
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ E + ++ KRGLLF DDG+S ++ T +A LPY ADL LD Q+D + + +KL
Sbjct: 284 STAMEPVMRDIGKRGLLFLDDGTSAQSKTADVAKGTELPYAFADLQLDGQLDINAVLKKL 343
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
LE IAR GQAIGVA AFDES++ I++W ++ +R + +V ++ L+
Sbjct: 344 DELERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALS 391
>gi|222087889|ref|YP_002546427.1| hypothetical protein Arad_4893 [Agrobacterium radiobacter K84]
gi|221725337|gb|ACM28493.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 400
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 150/224 (66%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A G R+AIVVSGLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA++ G E ++
Sbjct: 166 SGARGTRVAIVVSGLGLSQTGTQRAIEKLPEEITLAFAASGNSLQRWMQEARRGGHEILI 225
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
Q+P + FD N TL +Q+ + ++ L ++ + T Y GVMNY G LSN ++
Sbjct: 226 QVPFEPFDYPSNNPGPETLLTSQSAAKNIDNLHKAMGKITNYTGVMNYLGGRFLSNTDAL 285
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ KRGLLF DDGSS ++ + +A L P+ AD+ LD ++ +D I +KL LE
Sbjct: 286 QPVMRDIGKRGLLFLDDGSSAQSKSGTVAKALETPHAFADMQLDGELQQDAILKKLDELE 345
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
IAR G AIGVA AFDESI+ IS+W Q+ +R + +V +S LA
Sbjct: 346 RIARRNGTAIGVASAFDESIDAISKWSQEAAMRGIEIVAVSALA 389
>gi|218515367|ref|ZP_03512207.1| hypothetical protein Retl8_17560 [Rhizobium etli 8C-3]
Length = 367
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 199/372 (53%), Gaps = 28/372 (7%)
Query: 33 FCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTV 91
C F IVG S+Y AF G E + A L+ P Q+
Sbjct: 3 LCLFAIVGFSLYT----AFRGEGLERAKPPATEQAASQTLSKPPTATADQA--------- 49
Query: 92 CNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV 150
N + + ++ I+G +VV K + S P + + + +G + N+
Sbjct: 50 ANGMPRADPRSGANVEQMITGDGSVVTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEA 109
Query: 151 GREDT---EVP--------AMDK--NFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
EDT +P MD+ S G RIAIVVSGLG+SQTGTQRAI LP
Sbjct: 110 LLEDTAFGRLPIVGPDGRRPMDQYARPSSGVRGIRIAIVVSGLGLSQTGTQRAIAELPEE 169
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL ++ V + + L
Sbjct: 170 ITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTSKPVARNIENL 229
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
++ T Y GVMNY G LS+ + E + ++ KRGLLF DDG+S ++ T +A
Sbjct: 230 HKAMGEITNYTGVMNYLGGRFLSDPAAMEPVMRDIGKRGLLFLDDGTSAQSKTATVAKGA 289
Query: 318 NLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHV 377
LPY ADL LD Q+D + I EKL LE IAR GQAIG+A AFDES++ I++W ++ +
Sbjct: 290 ELPYAFADLQLDGQLDINAILEKLDELERIARKNGQAIGIASAFDESVDAIAKWSEEASM 349
Query: 378 RDVSVVPLSCLA 389
R + +V ++ L+
Sbjct: 350 RGIEIVGVAALS 361
>gi|222150173|ref|YP_002551130.1| hypothetical protein Avi_4301 [Agrobacterium vitis S4]
gi|221737155|gb|ACM38118.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 398
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 145/225 (64%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G R+AIVVSGLG+SQTGTQRAI LP +TLAFA++GNSL RWM+EA++ G E +
Sbjct: 169 WSGAHGTRVAIVVSGLGLSQTGTQRAIKHLPEQVTLAFAASGNSLSRWMQEARRGGHEIL 228
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQ+P++ N+ TL+V + L L ++ T Y G+MNY G LS+ +
Sbjct: 229 LQVPLEPVGYPANDPGRGTLQVGRAATDNLRDLHRAMASMTNYTGLMNYMGGRFLSDSGA 288
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + ++ A RGLLF DDGSS R+LT A +N+P+ VADL LDDQ+ I ++L L
Sbjct: 289 MDPVMRDIAARGLLFLDDGSSARSLTATFAKAMNMPFSVADLQLDDQIQEQAILKRLDEL 348
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E IAR G AIGVA AFDES+ I++W + R + +V +S LA
Sbjct: 349 ERIARRNGSAIGVASAFDESVNAIAKWAEGAKARGIEIVGVSALA 393
>gi|150398212|ref|YP_001328679.1| hypothetical protein Smed_3017 [Sinorhizobium medicae WSM419]
gi|150029727|gb|ABR61844.1| protein of unknown function DUF610 YibQ [Sinorhizobium medicae
WSM419]
Length = 399
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 149/226 (65%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G RIAIVV GLG+SQTGTQRAI LP +TLAFA+ GNSL RWM+EA++ G E +
Sbjct: 169 WSGARGTRIAIVVGGLGLSQTGTQRAIRDLPPEVTLAFAAAGNSLQRWMQEARRDGHEIL 228
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQ+PM+ FD N+ L+V+ ++ L +L S+ + T Y GVMNY G LSN ++
Sbjct: 229 LQVPMEPFDAPDNDPGPPALRVSADARENLAQLHRSMGQITNYTGVMNYLGGRFLSNADA 288
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DDG+S ++L+ LA ++P+ AD+ LD ++ R I +L L
Sbjct: 289 LEPVMRDLGKRGLLFLDDGTSAQSLSGTLAGAFDVPHGFADVVLDSELSRSTILRRLDDL 348
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E IAR G AIGVA AFDES+ I++W+++ R + VV ++ L K
Sbjct: 349 ERIARKGGTAIGVASAFDESVTSIAEWIEEAGGRGIEVVGVAALVK 394
>gi|190893932|ref|YP_001980474.1| hypothetical protein RHECIAT_CH0004369 [Rhizobium etli CIAT 652]
gi|190699211|gb|ACE93296.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 388
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 202/380 (53%), Gaps = 29/380 (7%)
Query: 26 RLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP 83
RLG + C F I G S+Y AF G E + A L+ P Q+
Sbjct: 16 RLGRIAASLCLFAIGGFSLYT----AFRGEGLERAKPPATEQAASQTLSKPPTATADQA- 70
Query: 84 SKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILGLSKK 142
N + + ++ I+G +VV K + S P + + + +G +
Sbjct: 71 --------ANGMPRADPRSGANVEQMITGDGSVVTKYSPRPRDGSGPVLVDAMQIGQDPR 122
Query: 143 ELLAKNKVGREDT---EVP--------AMDK--NFCSNASGARIAIVVSGLGISQTGTQR 189
N+ EDT +P MD+ S G RIAIVVSGLG+SQTGTQR
Sbjct: 123 MAAQPNEALLEDTAFGRLPIVGPDGRRPMDQYARPSSGVRGIRIAIVVSGLGLSQTGTQR 182
Query: 190 AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
AI LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL ++
Sbjct: 183 AIAELPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTSKP 242
Query: 250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNL 309
V + + L ++ T Y GVMNY G LS+ + E + ++ KRGLLF DDG+S ++
Sbjct: 243 VARNIENLHKAMGEITNYTGVMNYLGGRFLSDPAAMEPVMRDIGKRGLLFLDDGTSAQSK 302
Query: 310 TRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVIS 369
T +A LPY ADL LD Q+D + I EKL LE IAR GQAIG+A AFDES++ I+
Sbjct: 303 TATVAKGAELPYAFADLQLDGQLDINAILEKLDELERIARKNGQAIGIASAFDESVDAIA 362
Query: 370 QWLQQEHVRDVSVVPLSCLA 389
+W ++ +R + +V ++ L+
Sbjct: 363 KWSEEASMRGIEIVGVAALS 382
>gi|116254417|ref|YP_770255.1| polysaccharide deacetylase protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115259065|emb|CAK10176.1| putative polysaccharide deacetylase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 388
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 203/383 (53%), Gaps = 31/383 (8%)
Query: 24 ISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQ 81
I RLG + C F I G S+Y AF G E + A P P Q
Sbjct: 14 ILRLGRIAASLCLFAIGGFSLYT----AFRGDELERTKPPTGEQAATPPANTP------Q 63
Query: 82 SPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILGLS 140
P+ + + + ++ ++G +VV K + T P + + + +G
Sbjct: 64 PPTA---GQAADGMPRADPRSGANVEQMVTGDGSVVTKYSPRTRDGGGPVLVDAMQIGQD 120
Query: 141 KK-------ELLAKNKVGR-----EDTEVPAMDK--NFCSNASGARIAIVVSGLGISQTG 186
+ LL + GR D P MD+ S A G RIAIVVSGLG+SQTG
Sbjct: 121 PRMAAQPNEALLEETPFGRLPIVGPDGRRP-MDQYARPSSGARGVRIAIVVSGLGLSQTG 179
Query: 187 TQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKV 246
TQRAI LP IT AFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL
Sbjct: 180 TQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLT 239
Query: 247 TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP 306
T++ + + L ++ T Y GVMNY G LS+ + E + ++ KRGLLF DDG+S
Sbjct: 240 TKSAARNIENLHKAMGEITNYTGVMNYLGGRFLSDPAAMEPVMRDIGKRGLLFLDDGTSA 299
Query: 307 RNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
++ T +A LPY ADL LD Q+D + + +KL LE IAR GQAIGVA AFDES++
Sbjct: 300 QSKTAAIAKGTELPYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVASAFDESVD 359
Query: 367 VISQWLQQEHVRDVSVVPLSCLA 389
I++W ++ +R + +V ++ L+
Sbjct: 360 AIAKWSEEAAMRGIEIVGVAALS 382
>gi|86359657|ref|YP_471549.1| hypothetical protein RHE_CH04079 [Rhizobium etli CFN 42]
gi|86283759|gb|ABC92822.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 377
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 170/273 (62%), Gaps = 8/273 (2%)
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGR-----EDTEVPAMDK--NFCSNASGARIAIVV 177
+D++ ++ + L + LL + GR D P MD+ S A G R+AIVV
Sbjct: 101 VDAMQIGQDPRMAALPNETLLEDSAYGRLPIVGPDGRRP-MDQYARPSSGARGVRVAIVV 159
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
SGLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N
Sbjct: 160 SGLGLSQTGTQRAIAELPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAN 219
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ TL ++ V + + L ++ T Y G++NY G LS+ + E I ++ KRGL
Sbjct: 220 DPGPETLLTSKPVARNIENLHKAMGEITNYTGILNYLGGRFLSDPAAMEPIMRDIGKRGL 279
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
LF DDG+S ++ T +A LPY ADL LD Q+D + I +KL LE +AR GQAIG+
Sbjct: 280 LFLDDGTSAQSKTADVAKGTELPYAFADLQLDGQLDVNAILKKLDELERVARKNGQAIGI 339
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A AFDES++ I++W ++ +R + +V ++ L+K
Sbjct: 340 ASAFDESVDAIAKWSEEASMRGIEIVGVAALSK 372
>gi|241206894|ref|YP_002977990.1| hypothetical protein Rleg_4210 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860784|gb|ACS58451.1| protein of unknown function DUF610 YibQ [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 398
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 148/225 (65%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G RIAIVVSGLG+SQTGTQRAI LP IT AFA++GNSL RWM+EA++ G E +
Sbjct: 168 SSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEIL 227
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQ+P++ FD N+ TL T+ + + L ++ T Y GVMNY G LS+ +
Sbjct: 228 LQVPLEPFDYPANDPGPETLLTTKPAARNIENLHKAMGEITNYTGVMNYLGGRFLSDPAA 287
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DDG+S ++ T +A LPY ADL LD Q+D + + +KL L
Sbjct: 288 MEPVMRDIGKRGLLFLDDGTSAQSKTAAIAKGTELPYAFADLQLDGQLDINAVLKKLDEL 347
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E IAR GQAIGVA AFDES++ I++W ++ +R + +V ++ L+
Sbjct: 348 ERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALS 392
>gi|227823692|ref|YP_002827665.1| hypothetical protein NGR_c31780 [Sinorhizobium fredii NGR234]
gi|227342694|gb|ACP26912.1| hypothetical protein NGR_c31780 [Sinorhizobium fredii NGR234]
Length = 401
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 204/407 (50%), Gaps = 32/407 (7%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLL--FCTFIVGLSIYILISHAFVGTISEMI 58
M DLN PL + KR G L F I GLS + AF
Sbjct: 1 MGTDLNAPLGQGLKKRPPRKRNPRRMFGYAFLGVFSLAIAGLSGWA----AFA------- 49
Query: 59 PYSVIREIAP-IPLTIP-LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKT 114
P S++R AP + P + E SP+K L+ ++ ++ ++ G T
Sbjct: 50 PDSLLRTEAPGTSVETPQASTERPASPTK--PKVAGGSLRQSGARSGAHVEEMLTDDGAT 107
Query: 115 VVNKPTRSTSIDSLPTIEERLILG-------LSKKELLAKNKVGREDTEVP----AMDK- 162
V RS D I + G L ++L+ GR P MD+
Sbjct: 108 VTKYTPRSRDGDGPALISAGPMRGQDPRMAALPNEDLIEDTPQGRLPIVGPDGLRPMDQY 167
Query: 163 -NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
S A G RI +VV GLG+SQTGTQRAI L +TLAFA+ GNSL RWM++A++ G
Sbjct: 168 ARPWSGARGTRIGLVVGGLGLSQTGTQRAIRDLAPEVTLAFAAAGNSLQRWMQDARRDGH 227
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
E +LQIPM+ FD N + L V++ + L L S+ + T Y G+MNY G LS
Sbjct: 228 EILLQIPMEPFDYPDNAPGPHALLVSRGATKNLAELHRSMGQITNYTGIMNYLGGRFLSE 287
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
++ E + ++ KRGLLF DDG+S ++L+ L+ +P+ ADL LD ++ R+ I KL
Sbjct: 288 ADALEPLMRDLGKRGLLFLDDGTSAQSLSGTLSGAFGVPHGFADLVLDSELSRNAILRKL 347
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
LE +AR G AIGVA AFDES+ I++W+++ R + V +S +
Sbjct: 348 DELERVARRNGTAIGVASAFDESVATIAEWMEEAGGRGIEFVGISAV 394
>gi|13473411|ref|NP_104978.1| hypothetical protein mll3999 [Mesorhizobium loti MAFF303099]
gi|14024160|dbj|BAB50764.1| mll3999 [Mesorhizobium loti MAFF303099]
Length = 247
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 139/225 (61%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A GAR+AIV+ GL +SQTGTQ AI LPA +TLAFA GNS+ RWM+ A++ G E +
Sbjct: 17 WSGARGARVAIVIGGLAVSQTGTQAAIAKLPAEVTLAFAPQGNSIGRWMQAARQGGHEIV 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+Q+P++ FD TL V + ++ L L ++L R T Y GVMNY GA ++K +
Sbjct: 77 MQVPLEPFDYPNVNPGRNTLTVAGSAEENLKNLHWALSRTTNYTGVMNYMGARFSADKAA 136
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E E KRGL + DDGSS R+L LA K +P++ D +D DR I +KL GL
Sbjct: 137 MEPFMAELGKRGLAYIDDGSSARSLAPDLALKDGVPFVAGDTAIDAVQDRGAILKKLDGL 196
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E AR G A+G+ AFD +++++S W+ + R + +VP+S +A
Sbjct: 197 EATARAKGTAVGIGSAFDLTVDIVSSWIAEAKKRGIEIVPISAVA 241
>gi|163761381|ref|ZP_02168455.1| hypothetical protein HPDFL43_17685 [Hoeflea phototrophica DFL-43]
gi|162281376|gb|EDQ31673.1| hypothetical protein HPDFL43_17685 [Hoeflea phototrophica DFL-43]
Length = 418
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 140/226 (61%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A GAR+ I+V GLG+SQTGTQ AI LP +ITLAFA+NGNSL RWM+EA+++G E +
Sbjct: 189 WSGARGARVVIIVGGLGLSQTGTQHAIAALPEDITLAFAANGNSLQRWMQEARREGHEIL 248
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQIP + FD N+ TL V + L+ L S+ R T Y G+ N+ G LS+ ++
Sbjct: 249 LQIPFEPFDYPANDPGPRTLTVEAGAEANLDNLHASMARITNYTGITNFMGGRFLSDADA 308
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ A RGL+F DDG+S ++LT + L +P+ AD+ LD +R I KL L
Sbjct: 309 LEPVMRDIADRGLMFLDDGTSAQSLTEPFSKTLGIPFAAADMVLDATQERGYILAKLDDL 368
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E AR G AIGVA AF+ S++ I+ W + R + +V S A+
Sbjct: 369 ERSARRNGIAIGVASAFEVSVDAIASWANEAKARGIEIVSASAGAE 414
>gi|15890022|ref|NP_355703.1| hypothetical protein Atu2773 [Agrobacterium tumefaciens str. C58]
gi|15157997|gb|AAK88488.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 399
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 141/224 (62%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G R+AIVV GLG+SQTG+Q+AI LP +TL FA++GNSL RWM++A+++G E +
Sbjct: 169 WSGARGTRVAIVVGGLGLSQTGSQKAIRDLPPEVTLGFAASGNSLQRWMQDARREGHEIL 228
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQIP++ F TL + ++RL S+ + T Y GVMNY G L+ + +
Sbjct: 229 LQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSA 288
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DDGSS ++L+ +A ++ P AD+ LD +V I KL L
Sbjct: 289 LEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDL 348
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E IAR GQAIGVA AFDESI IS+W ++ R + +V +S L
Sbjct: 349 ERIARRNGQAIGVASAFDESIAAISKWSREAGGRGIEIVGVSAL 392
>gi|319780956|ref|YP_004140432.1| hypothetical protein Mesci_1219 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166844|gb|ADV10382.1| protein of unknown function DUF610 YibQ [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 392
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 136/225 (60%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S GAR+AIV+ GL +SQTGTQ AI LPA +TLAFA GNS+ RWM+ A++ G E +
Sbjct: 162 WSGGRGARVAIVIGGLSVSQTGTQAAIAKLPAEVTLAFAPQGNSIGRWMQAARQSGHEIV 221
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+Q+P++ FD TL V + + L L ++L R T Y GVMNY GA ++ +
Sbjct: 222 MQVPLEPFDYPKVNPGRNTLTVAASADENLKSLHWALSRTTNYTGVMNYMGARFSADAAA 281
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E E KRGL + DDGSS R+L LA K +P++ D+ +D DR +I +KL L
Sbjct: 282 MEPFIAELGKRGLAYIDDGSSARSLAPDLALKDGVPFVAGDMAIDAVQDRGEILKKLDSL 341
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E AR G A+G+ AFD +++ +S W+ + R + +VP+S +A
Sbjct: 342 EATARAKGTAVGIGSAFDLTVDTVSSWVVEAKKRGIEIVPISAVA 386
>gi|159795367|pdb|2QV5|A Chain A, Crystal Structure Of Uncharacterized Protein Atu2773 From
Agrobacterium Tumefaciens C58
gi|159795368|pdb|2QV5|B Chain B, Crystal Structure Of Uncharacterized Protein Atu2773 From
Agrobacterium Tumefaciens C58
Length = 261
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 141/224 (62%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G R+AIVV GLG+SQTG+Q+AI LP +TL FA++GNSL RWM++A+++G E +
Sbjct: 24 WSGARGTRVAIVVGGLGLSQTGSQKAIRDLPPEVTLGFAASGNSLQRWMQDARREGHEIL 83
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQIP++ F TL + ++RL S+ + T Y GVMNY G L+ + +
Sbjct: 84 LQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSA 143
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DDGSS ++L+ +A ++ P AD+ LD +V I KL L
Sbjct: 144 LEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDL 203
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E IAR GQAIGVA AFDESI IS+W ++ R + +V +S L
Sbjct: 204 ERIARRNGQAIGVASAFDESIAAISKWSREAGGRGIEIVGVSAL 247
>gi|325294144|ref|YP_004280008.1| hypothetical protein AGROH133_09217 [Agrobacterium sp. H13-3]
gi|325061997|gb|ADY65688.1| hypothetical protein AGROH133_09217 [Agrobacterium sp. H13-3]
Length = 373
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 140/224 (62%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G R+AIVV GLG+SQTG+Q+AI LP +TL FA++GNSL RWM+EA+++G E +
Sbjct: 143 WSGARGTRVAIVVGGLGLSQTGSQKAIRELPPEVTLGFAASGNSLQRWMQEARREGHEIL 202
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQIP++ F TL + ++RL S+ + T Y G+MNY G LS + +
Sbjct: 203 LQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGIMNYLGGRFLSEQAA 262
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DD SS ++L+ +A ++ P AD+ LD +V I KL L
Sbjct: 263 LEPVMRDIGKRGLLFLDDASSAQSLSGGIAKAISAPQGFADVLLDGEVTEATILRKLDEL 322
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E IAR GQAIGVA AFDESI IS+W ++ R + +V +S L
Sbjct: 323 ERIARRNGQAIGVASAFDESIAAISKWSREAGGRGIEIVGVSAL 366
>gi|260466735|ref|ZP_05812921.1| protein of unknown function DUF610 YibQ [Mesorhizobium
opportunistum WSM2075]
gi|259029465|gb|EEW30755.1| protein of unknown function DUF610 YibQ [Mesorhizobium
opportunistum WSM2075]
Length = 392
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 134/225 (59%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A GAR+AIV+ GL +SQTGTQ AI LP +TL FA GNS+ RWM+ A++ G E +
Sbjct: 162 WSGARGARVAIVIGGLAVSQTGTQAAIAKLPPEVTLGFAPQGNSIGRWMQAARQGGHEIV 221
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+Q+P++ FD TL V + + L L ++L R T Y GVMNY GA ++ +
Sbjct: 222 MQVPLEPFDYPSVNPGRNTLTVAASADENLKSLHWALSRTTNYTGVMNYMGARFSADATA 281
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E KRGL + DDGSS R+L LA K +P++ D+ +D DR +I +KL L
Sbjct: 282 MGPFMAELGKRGLAYIDDGSSARSLAPDLALKDGVPFVAGDMAIDAVQDRGEILKKLDSL 341
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E AR G A+G+ AFD +++ +S W+ + R + +VP+S +A
Sbjct: 342 EATARAKGFAVGIGSAFDLTVDTVSSWVAEAKKRGIEIVPISAVA 386
>gi|114706555|ref|ZP_01439456.1| hypothetical protein FP2506_12424 [Fulvimarina pelagi HTCC2506]
gi|114537947|gb|EAU41070.1| hypothetical protein FP2506_12424 [Fulvimarina pelagi HTCC2506]
Length = 386
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 137/221 (61%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
G R+AIVV GLGISQ+GT AI LP+ +TLAFA+NGNSL RWM+EA++ G E +LQ+PM
Sbjct: 161 GPRVAIVVGGLGISQSGTLSAIRNLPSEVTLAFAANGNSLARWMQEARRGGHELLLQMPM 220
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ N+ T+ Q + + + SL + T Y GVMNY G L S+ +
Sbjct: 221 EPVGYPTNDPGDNTVTSEQMNAEDFSSVLASLGQMTNYVGVMNYLGGQLTSDASALHPFM 280
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
E A+RGL++ DDGSS R++ LA ++P ADL LDD D +I +L LE+IAR
Sbjct: 281 SELARRGLMYLDDGSSARSVAVDLAETTSIPAGAADLVLDDVQDAGEISRRLDQLEQIAR 340
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
T G AIGVA AF+ + VI W+++ R ++V P+S + +
Sbjct: 341 TRGHAIGVASAFETTTSVIGSWIREAERRGITVTPVSSVVR 381
>gi|110635778|ref|YP_675986.1| protein of unknown function DUF610, YibQ [Mesorhizobium sp. BNC1]
gi|110286762|gb|ABG64821.1| protein of unknown function DUF610, YibQ [Chelativorans sp. BNC1]
Length = 330
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 138/225 (61%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A GARIAIV+ GLGISQTGTQ AI LP ITLAFA GNSL RWM+EA++ G E I
Sbjct: 97 WSGARGARIAIVIGGLGISQTGTQEAIEKLPPEITLAFAPLGNSLMRWMQEARRDGHEVI 156
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+Q+P++ YTL + + LR+ L R T Y GVMNY GA +++++
Sbjct: 157 MQVPLEPAGYPSTNPGRYTLLTNVGADKNIRNLRWVLSRITNYTGVMNYMGARFTADRKA 216
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+++ E ++RGLL+FDDG S R+L +A +P++ D +D + +R I +KL L
Sbjct: 217 MDLLMDELSQRGLLYFDDGMSARSLAEEVALAKGVPFVAGDDVIDQERERGAILKKLDEL 276
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E IAR G A+G +A + +++ ++ W + R V +VP+S +A
Sbjct: 277 ERIARAKGFAVGSGIALNATVDAVTSWAGEVRKRGVELVPISAVA 321
>gi|90418832|ref|ZP_01226743.1| possible divergent polysaccharide deacetylase [Aurantimonas
manganoxydans SI85-9A1]
gi|90336912|gb|EAS50617.1| possible divergent polysaccharide deacetylase [Aurantimonas
manganoxydans SI85-9A1]
Length = 384
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 143/258 (55%), Gaps = 3/258 (1%)
Query: 132 EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAI 191
++ LI + L A+ GR +V A S G RIAIVV GLGISQTGT AI
Sbjct: 124 DDALIEDSAYGPLPARAPDGRRPYDVYA---GAWSGKPGTRIAIVVGGLGISQTGTLNAI 180
Query: 192 NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQ 251
LP +T F+ +GNSLDRWM+EA++ G E +LQ+P++ + TL V
Sbjct: 181 GSLPPGVTFGFSPSGNSLDRWMQEARRSGHELVLQVPLEPVGYPQVDPGEDTLTVDDAAA 240
Query: 252 QLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTR 311
L+ L SL T Y G+MNY G ++ + E + E +RGL+FFDD SS R++
Sbjct: 241 GDLSALHASLATITNYVGIMNYMGGRFVAEPAAMEALIAELGRRGLMFFDDASSLRSVAA 300
Query: 312 VLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQW 371
A ++P V+DL +D D IR +L LE IAR G AIG A AFD S+ I++W
Sbjct: 301 DTAQLQSVPAAVSDLSIDRSQDPADIRSQLDTLERIARAEGTAIGFASAFDVSVATIAKW 360
Query: 372 LQQEHVRDVSVVPLSCLA 389
+ + R + +VPLS LA
Sbjct: 361 IGEARGRGIEIVPLSALA 378
>gi|239832921|ref|ZP_04681250.1| protein of unknown function DUF610 YibQ [Ochrobactrum intermedium
LMG 3301]
gi|239825188|gb|EEQ96756.1| protein of unknown function DUF610 YibQ [Ochrobactrum intermedium
LMG 3301]
Length = 406
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 129/225 (57%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A GARIA+V+ GLG+SQTG+ AI+ LP +TL FA GNSL RWM+ A++ G E +L
Sbjct: 177 SGARGARIALVIGGLGLSQTGSMEAIDKLPQEVTLGFAPQGNSLQRWMQAARQNGHELVL 236
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
Q+PM+ FD TL V ++ L ++L R T Y GVMNY GA S E
Sbjct: 237 QLPMEPFDYPRVNPGRNTLTVGDGAKKNEASLLWALSRMTNYAGVMNYMGARFTSETEVF 296
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ E +RGL + DDG+S R+ +A +P+ AD+ +D +R I ++L LE
Sbjct: 297 SPVLGEIGRRGLYYLDDGTSARSEADRIASSDAVPFAAADVLIDAAQERGAILDRLDELE 356
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IAR G AIG AF +++ ++ W + R + +VP+S L +
Sbjct: 357 RIARANGSAIGTGSAFAVTVDAVAAWANEVKKRGIEIVPVSALVR 401
>gi|304392603|ref|ZP_07374543.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303295233|gb|EFL89593.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 408
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 132/227 (58%), Gaps = 1/227 (0%)
Query: 165 CSNASGA-RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A GA RIA+V+ GLG+SQTGTQ AI LP ITLAF+ GNSL RWM+ A+++G E
Sbjct: 178 SSGAVGANRIALVLGGLGLSQTGTQEAIKRLPEGITLAFSPQGNSLQRWMQAARREGHEV 237
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
LQ+PM+ TL + L LR+SL R T Y V+NY GA +LSN+
Sbjct: 238 ALQLPMEPLGYPTVNPGPQTLNSKVSKGANLKSLRWSLGRMTNYPVVINYLGAGMLSNRP 297
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E I +E RGL DDG+ + A ++ LP A + +D D D+IR +L+
Sbjct: 298 ALEPILQELRARGLGIVDDGTVQSSNLVTYANEMRLPNAKASIIIDRVRDADRIRAQLQT 357
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
LE +AR G I A AF +++E++ +W + + R + +VPLS L +
Sbjct: 358 LEAVARQQGNVIATATAFPQTVEIVEEWAKTLNQRGILLVPLSNLVR 404
>gi|153008397|ref|YP_001369612.1| hypothetical protein Oant_1063 [Ochrobactrum anthropi ATCC 49188]
gi|151560285|gb|ABS13783.1| protein of unknown function DUF610 YibQ [Ochrobactrum anthropi ATCC
49188]
Length = 407
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 190/408 (46%), Gaps = 27/408 (6%)
Query: 3 IDLNHPLR--KKTPKRKSFYSQIISRL--GLFLLFCTFIVGLSIYILISH---AFVGTIS 55
+DLN PL KK KR S+ GL +L + G +++ + + AF T +
Sbjct: 2 LDLNSPLGLDKKPQKRGGSRSRAFRSFMTGLVILGGLCLAGGAVFAIWQNNQAAFRKTET 61
Query: 56 EMI-------PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ P + E P+ P + S + + + G
Sbjct: 62 AAVDPTQIEAPVANKTEAKPVTGNTPPPGSALRGASGQPGPAIIKVTPDMPPGMPGAATG 121
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG----REDTEVPAMDKNF 164
G VV + T + D + + L ++ L+ ++ G R + MD
Sbjct: 122 MAEGNVVVVQNTHQSGQD-------KRVAHLPEQALVEQSPTGPLPVRGADGLRPMDAYA 174
Query: 165 C--SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S A GARIAIV+ GLG+SQTG+ A++ LP +TL FA GNSL RWM+ A++ G E
Sbjct: 175 AGWSGARGARIAIVIGGLGLSQTGSMEAVDKLPPEVTLGFAPQGNSLQRWMQAARQNGHE 234
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+LQ+PM+ FD TL V + L ++L R T Y GVMNY GA S
Sbjct: 235 LVLQLPMEPFDYPRINPGRNTLTVDDGASKNQAFLLWALSRMTNYAGVMNYMGARFTSET 294
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E+ + E KRGL + DDG+S R+ +A +P+ AD+ +D +R I ++L
Sbjct: 295 EAFSPVLGEIGKRGLYYLDDGTSARSQADRIAGSDAVPFAAADILIDAAQERGAILDRLD 354
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
LE AR G AIG AF +++ +++W + R + +VP+S L +
Sbjct: 355 ELERTARANGSAIGTGSAFAVTVDAVAEWANEVKKRGIEIVPVSALVR 402
>gi|220924600|ref|YP_002499902.1| hypothetical protein Mnod_4734 [Methylobacterium nodulans ORS 2060]
gi|219949207|gb|ACL59599.1| protein of unknown function DUF610 YibQ [Methylobacterium nodulans
ORS 2060]
Length = 404
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 174/392 (44%), Gaps = 20/392 (5%)
Query: 5 LNHPL--RKKTPKRKSFYSQIISRLGLFLLFCTFIVG-LSIYILISHAFVGTISEMIPYS 61
L+ PL R + P R + + I + + +VG L+ I + +G +
Sbjct: 16 LSRPLGIRNEAPSRLARWRAAIPVRPILAAGSSVLVGALACLIAFTEDPLGGEPHAVVTI 75
Query: 62 VIRE-IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
+RE +AP P E +P+ D + +++ S + + VV +
Sbjct: 76 TLREPVAPAP-------EPTLAPAAPDGSRSAGEVERASGVAVTRPEGAAVPDAVVIRVP 128
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV------PAMDKNFCSNASGARIA 174
+ P + RL+ K ++G + P A RIA
Sbjct: 129 DPAELSLAPAPDPRLV---EKGRYGVLPRIGPDGARALDIYARPEATSLRSGAAPAGRIA 185
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+VV+GLGI QT TQ A+ LP +TLAFA G+ + + A++ G E ++Q PM+ FD
Sbjct: 186 LVVTGLGIGQTVTQEAVTRLPPAVTLAFAPYGSDIGKAATRAREAGHEVLVQAPMEPFDY 245
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
N+ TL + RL + L R G GV+NY GA L S E + +E
Sbjct: 246 PDNDPGPQTLLAGAKPAENTGRLAFVLARVPGAIGVVNYMGARLTGEAASLEPVLREIGA 305
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
RGL F DDGSSPR+L + + P AD +D Q D I +L LEE AR G A
Sbjct: 306 RGLGFLDDGSSPRSLALEVGRRTRTPVARADAVVDAQPLPDAIDRELARLEETARRKGFA 365
Query: 355 IGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
+G A+A ++E I +W + R + +VP S
Sbjct: 366 LGTAMALPLTVERILRWSRDLEARGILLVPAS 397
>gi|307942948|ref|ZP_07658293.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773744|gb|EFO32960.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 385
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 127/220 (57%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
AS +IAIV++GLG+S+ GTQ ++ LPA+ TL + G +LDRW++ A+ KG E +L +
Sbjct: 162 ASTPKIAIVITGLGLSEAGTQNVLDQLPADTTLGLSPYGANLDRWIQGARTKGHEIVLSL 221
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ FD N+ +TL V+ T +L RL + L R T Y GVM GA S + + ++
Sbjct: 222 PMEPFDFPDNDPGPHTLLVSLTQSELTERLTWLLTRITNYVGVMPEMGARYTSTRPTLQL 281
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ ++ RGL+F D+G+S R++ +A + P+ D+ LD D+I KL LE I
Sbjct: 282 LMEKLRDRGLMFVDNGTSSRSVADEIAEETTTPFSGVDVVLDAVPREDEINAKLLQLEGI 341
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AR G A+ A ++ I +W + R + +VP+S
Sbjct: 342 ARARGVAVATGSALPVTVRQIEKWARDLEERGLLLVPVSA 381
>gi|316931861|ref|YP_004106843.1| hypothetical protein Rpdx1_0469 [Rhodopseudomonas palustris DX-1]
gi|315599575|gb|ADU42110.1| protein of unknown function DUF610 YibQ [Rhodopseudomonas palustris
DX-1]
Length = 412
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 125/224 (55%), Gaps = 1/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ IVV GLGI T A+ LPA +TLAF G+ + EA+ K E ILQIPM+ F
Sbjct: 190 VTIVVGGLGIGAARTNDAVMKLPAPVTLAFTPYGSDPGKLATEARAKRHEIILQIPMEPF 249
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL + +Q L+RL + L R GY G+ N+ GA ++ + + + I ++
Sbjct: 250 DYPDNDPGPQTLLTSSAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATEPAMQAIIRDA 309
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDG++PR++ LA L +P+ ADL +D I + L LE IA+ G
Sbjct: 310 AKRGLGYLDDGTAPRSVAGTLANSLAIPFARADLTIDQVPAGADIDKALTRLESIAKERG 369
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AIG+A A +IE I W + R + +VPL+ A L S SS
Sbjct: 370 SAIGMASALPVTIERIVNWSKSLESRGIVLVPLTT-AMLKSKSS 412
>gi|86747385|ref|YP_483881.1| hypothetical protein RPB_0259 [Rhodopseudomonas palustris HaA2]
gi|86570413|gb|ABD04970.1| Protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris HaA2]
Length = 405
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 122/215 (56%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAIVV+GLG+ T A+ LP +TLAF G + +++A+ K E +LQIPM+ F
Sbjct: 183 IAIVVTGLGVGAARTNDAVIKLPRAVTLAFTPYGADPGKLVEQARAKQHEVLLQIPMEPF 242
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL + +Q L+RL + L R GY G+ N+ GA ++ + + + I +E
Sbjct: 243 DYPDNDPGPQTLLTSGAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATEAAMQPIIREA 302
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDGS+PR++ LA L +P+ ADL +D +I + L LE +A+ G
Sbjct: 303 AKRGLGYLDDGSAPRSVAPALAKSLAMPFARADLAIDSVPTGGEIDKALARLEGLAKERG 362
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AIG A A SIE I W + R + +VPL+
Sbjct: 363 LAIGTASALPLSIERIVSWSKSLESRGILLVPLTT 397
>gi|118589439|ref|ZP_01546845.1| hypothetical protein SIAM614_07838 [Stappia aggregata IAM 12614]
gi|118438139|gb|EAV44774.1| hypothetical protein SIAM614_07838 [Stappia aggregata IAM 12614]
Length = 370
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 5/271 (1%)
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
N P S SI+ + ER G K ++ V D + + F S +IA++
Sbjct: 101 NAPVTSLSINPDSRVSERSDFGFLPK--ISDAGVRPLDAYSRPVVREFTSIP---KIAVI 155
Query: 177 VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESY 236
V+GLG+S+TGTQ AI LPA+ T A A G LD WM++A+ KG E +LQ+P++ FD
Sbjct: 156 VTGLGLSETGTQNAITRLPADTTFALAPYGGDLDVWMQQARTKGHELLLQLPLEPFDFPD 215
Query: 237 NEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRG 296
N+ +TL V+ ++++RL + L R T Y GV+ GA + K S E + ++ RG
Sbjct: 216 NDPGPHTLLVSLRPNEMMDRLGFLLTRATNYVGVIPEMGARFTATKPSMEFLLEKLKARG 275
Query: 297 LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIG 356
L+F D+G+S R++ +A + +P+ D+ LD+ D I KL LE +AR G A+
Sbjct: 276 LMFADNGTSSRSIADEVAKEKRIPFSGVDVVLDEVPREDDIDAKLLQLESVARARGVAVA 335
Query: 357 VAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
A A ++ + +W+Q R + +VP+S
Sbjct: 336 TASALPVTVRQLEKWVQDLEERGLQLVPVSA 366
>gi|39933247|ref|NP_945523.1| hypothetical protein RPA0170 [Rhodopseudomonas palustris CGA009]
gi|39652872|emb|CAE25614.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 412
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ IVV GLGI T A+ LPA + LAF G+ + EA+ K E ILQIPM+ F
Sbjct: 190 VTIVVGGLGIGAARTNDAVMKLPAAVALAFTPYGSDPGKLATEARAKRHEVILQIPMEPF 249
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL + +Q L+RL + L R GY G+ N+ GA ++ + + + + ++
Sbjct: 250 DYPDNDPGPQTLLTSSAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATEPAMQAVIRDA 309
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDG++PR++ LA L +P++ ADL +D I + L LE IA+ G
Sbjct: 310 AKRGLGYLDDGTAPRSVAGTLAKSLAIPFVRADLTIDQVPAGADIDKSLARLESIAKERG 369
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
A+G+A A +IE I W + R + + PL+ A L S SS
Sbjct: 370 SAVGMASALPVTIERIVNWSKSLESRGILLAPLTT-AMLKSKSS 412
>gi|192288598|ref|YP_001989203.1| hypothetical protein Rpal_0165 [Rhodopseudomonas palustris TIE-1]
gi|192282347|gb|ACE98727.1| protein of unknown function DUF610 YibQ [Rhodopseudomonas palustris
TIE-1]
Length = 412
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ IVV GLGI T A+ LPA + LAF G+ + EA+ K E ILQIPM+ F
Sbjct: 190 VTIVVGGLGIGAARTNDAVMKLPAAVALAFTPYGSDPGKLATEARAKRHEVILQIPMEPF 249
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL + +Q L+RL + L R GY G+ N+ GA ++ + + + I ++
Sbjct: 250 DYPDNDPGPQTLLTSSAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATEPAMQAIIRDA 309
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDG++PR++ LA L +P+ ADL +D I + L LE IA+ G
Sbjct: 310 AKRGLGYLDDGTAPRSVAGTLAKSLAIPFARADLTIDQVPAGADIDKSLARLESIAKERG 369
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
A+G+A A +IE I W + R + + PL+ A L S SS
Sbjct: 370 SAVGMASALPVTIERIVNWSKSLESRGILLAPLTT-AMLKSKSS 412
>gi|91975045|ref|YP_567704.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB5]
gi|91681501|gb|ABE37803.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB5]
Length = 411
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 1/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAIVV+GLG+ T A+ LP +TLAF G+ + +++A+ K E +LQIPM+ F
Sbjct: 189 IAIVVTGLGVGAARTNDAVIKLPRAVTLAFTPYGSDPGKLVEQARAKQHEVLLQIPMEPF 248
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL + +Q L+RL + L R GY G+ N+ GA ++ + + I +E
Sbjct: 249 DYPDNDPGPQTLLTSGAPEQNLDRLTWHLSRIQGYVGLSNFMGARFVATDAAMQPIIREA 308
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDGS+PR++ LA L +P+ AD +D +I + L LE +A+ G
Sbjct: 309 AKRGLGYLDDGSAPRSVAPSLAKSLAMPFARADSAIDAVPTAAEIDKALARLEALAKERG 368
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
A+G A A SIE I W + R + +VPL+ +A L S S+
Sbjct: 369 SAVGTASALPVSIERIVSWSKSLESRGILLVPLT-MAMLKSKST 411
>gi|90421691|ref|YP_530061.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB18]
gi|90103705|gb|ABD85742.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB18]
Length = 412
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 120/215 (55%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAIVV GLG+ T AI LPA +TLAF G+ + ++ A+ + E +LQIPM+ F
Sbjct: 185 IAIVVGGLGVGAAKTNDAIMKLPAAVTLAFTPYGSDPAKLVERARAQRHEVLLQIPMEPF 244
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL T +Q ++RL + L R GY G+ N+ G ++ + + + I +E
Sbjct: 245 DYPDNDPGPQTLLTTLPSEQNIDRLYWHLSRFQGYIGITNFMGGRFVTTEPALQPIVREA 304
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDG SPR + +LA LP+ ADL +D +I L LE +AR G
Sbjct: 305 AKRGLGYLDDGQSPRGVAALLATTQTLPFGKADLSIDVVPTALEIDRALYRLESLARDNG 364
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AIG+A A SIE I+ W + R + +VPL+
Sbjct: 365 NAIGMASALPISIERIATWSRSLEGRGLLLVPLTT 399
>gi|254504290|ref|ZP_05116441.1| Divergent polysaccharide deacetylase family [Labrenzia alexandrii
DFL-11]
gi|222440361|gb|EEE47040.1| Divergent polysaccharide deacetylase family [Labrenzia alexandrii
DFL-11]
Length = 372
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 130/216 (60%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+IA+VV+GLG+S+ GTQ AI+ LPA++T A A G+ LD WM++A+ KG E +LQ+P++
Sbjct: 151 KIAVVVTGLGLSEAGTQNAIDSLPADVTFALAPYGSDLDLWMQQARMKGHELLLQLPLEP 210
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
FD N+ +TL V+ +LL+RL + L R T Y GV+ GA S + S + + ++
Sbjct: 211 FDFPDNDPGPHTLLVSLQPTELLDRLAFLLTRATNYVGVIGEMGARFSSTRPSMQYLLEK 270
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
RGL+F D+G++ R++ +A +L +P+ D+ LD+ I KL LE +AR
Sbjct: 271 LETRGLMFVDNGTTSRSIADEVAGELRMPFSGVDVVLDEVPRESNIDAKLLQLESVARAR 330
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
G A+ A ++ + +W+Q R + +VP+S
Sbjct: 331 GYAVAAGSALPVTVRQLQEWVQDLEQRGLQLVPVSA 366
>gi|154251924|ref|YP_001412748.1| hypothetical protein Plav_1471 [Parvibaculum lavamentivorans DS-1]
gi|154155874|gb|ABS63091.1| protein of unknown function DUF610 YibQ [Parvibaculum
lavamentivorans DS-1]
Length = 426
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 127/219 (57%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
RIA+VVSG+GIS++ T AI++LP +TL+FA G L W+ A+ G E +L++PM+
Sbjct: 207 RIALVVSGMGISESATSHAIDVLPPEVTLSFAPYGTGLQGWIDRARAAGHEVLLELPMEP 266
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
F N+ +TL + ++ + RL + + R +GY GVMNY+GA ++ + + +
Sbjct: 267 FGYPQNDPGPHTLLTSLQPKENIERLEWLMSRFSGYAGVMNYQGARFTTSATALKPVVAA 326
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
RGLL+ D+G+S R+L LA + +P + A +D + + I L LE+ + T
Sbjct: 327 LGARGLLYVDNGASARSLAPQLAGESRMPAVQATRIIDPVQNPEVIATSLDMLEKTSSET 386
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G A+GVA F +++ +++W + +VP++ +A+
Sbjct: 387 GSAVGVASGFPVTVDALAEWAKTLRNDGYVLVPVTAIAR 425
>gi|115522300|ref|YP_779211.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisA53]
gi|115516247|gb|ABJ04231.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisA53]
Length = 403
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 159/329 (48%), Gaps = 28/329 (8%)
Query: 78 EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG---KTVVNKPTRSTSI--DSLPTIE 132
E K P+K ++ Q I + SG + VV T I D PT
Sbjct: 76 ESKDKPAKSESAAKATPPAEAEGQRTVTIIDGTSGERKQVVVASETAGAKIERDEAPTS- 134
Query: 133 ERLILGLSKKELLAKNKVGREDTEVP-AMD--KNFCSNASGA-----------RIAIVVS 178
+ G++ K LL +++ G +P A D K F + A+G+ IAIVV
Sbjct: 135 ---VAGINPK-LLEQSRYG----AIPIAADGLKPFAAYATGSDADRATAARLPTIAIVVG 186
Query: 179 GLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
GLG+ T AI LPA +TLAF G+ + + A+ + E +LQIPM+ F+ N+
Sbjct: 187 GLGVGAAKTADAIMKLPAAVTLAFTPYGSDPNGLVARARAQRHEVLLQIPMEPFEYPDND 246
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
TL + + +Q ++RL + L R GY G+ N+ G + + I KE AKRGL
Sbjct: 247 PGPQTLLTSLSAEQNIDRLHWHLSRFQGYVGIANFMGGRFVITDTALSPIMKEAAKRGLG 306
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
+ DDG +PR+L LA +P+ ADL +D +I + L LE +AR G AIG A
Sbjct: 307 YLDDGQAPRSLASSLAAAQTVPFGKADLGIDAVPTALEIDKALSRLEALARENGNAIGTA 366
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSC 387
A SIE I+ W + R + +VPL+
Sbjct: 367 SALPVSIERIAAWAKSLQSRGLLLVPLTT 395
>gi|114571337|ref|YP_758017.1| hypothetical protein Mmar10_2797 [Maricaulis maris MCS10]
gi|114341799|gb|ABI67079.1| protein of unknown function DUF610, YibQ [Maricaulis maris MCS10]
Length = 445
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 119/230 (51%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A + + + IA+VV G+G++ T TQ AI+ LP + L+FA+ L W+ A+
Sbjct: 164 AYARPYHGDPGAPTIAVVVGGMGLNSTVTQAAIDELPPEVALSFAAYARDLQVWIDRARA 223
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G E +++ PM+ FD N+ +TL T ++ RL + L R TGYFGV NY GA
Sbjct: 224 AGHEVLIEAPMEPFDYPNNDPGPHTLLADGTAEENSRRLAWVLSRATGYFGVTNYLGARF 283
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
+++++ +F RG+ F DG+ R+ A ++ Y VAD LD+ + D I
Sbjct: 284 SASQDAMRQVFGTLEGRGVAFLHDGAGRRSTIEAAAGATDIEYAVADRILDEDLSPDAID 343
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E+L LE +A G A+G A+ ++E I W +R + P S +
Sbjct: 344 ERLLALEALAIQNGSALGTGFAYPATVEQIRDWAVSLDLRGYQLAPPSAV 393
>gi|92116147|ref|YP_575876.1| protein of unknown function DUF610, YibQ [Nitrobacter hamburgensis
X14]
gi|91799041|gb|ABE61416.1| protein of unknown function DUF610, YibQ [Nitrobacter hamburgensis
X14]
Length = 401
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 125/227 (55%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
D + A+ IAIVV GLG+ T AI LP +TLAF G+ + +++A+ +
Sbjct: 167 DADRAKAATMPVIAIVVGGLGVGAAKTADAIMKLPPAVTLAFTPYGSDPGKLVEQARAQR 226
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
E +LQ+PM+ +D N+ TL T +Q ++RL + L R GY G+ N+ GA ++
Sbjct: 227 HEILLQVPMEPYDYPDNDPGPQTLLTTLGTEQNIDRLHWHLSRFQGYVGLANFMGARFVA 286
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
+ I +E AKRGL + DDGS+PR++ LA +P+ ADL +D +I +
Sbjct: 287 AATVMQPIIREAAKRGLGYLDDGSTPRSVAGQLAEGQAMPFAKADLTIDAVPTSVEIDKA 346
Query: 341 LKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
L LE++A+ G AIG+A A S+E I W + R V +VPL+
Sbjct: 347 LARLEDLAKERGAAIGMASALPVSVERIGAWAKGLESRGVMLVPLTT 393
>gi|323137511|ref|ZP_08072588.1| protein of unknown function DUF610 YibQ [Methylocystis sp. ATCC
49242]
gi|322397137|gb|EFX99661.1| protein of unknown function DUF610 YibQ [Methylocystis sp. ATCC
49242]
Length = 413
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 1/221 (0%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A RIA+V+ GLG++ + AI+ LP +TLAFA G LDR + A+ +G EA+LQ
Sbjct: 173 KADAPRIALVIGGLGLNAATSADAIDQLPEGVTLAFAPYGAELDRLVASARARGHEALLQ 232
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PM+ FD N +TL VT + L++ + R +GY GVMNY G +++++
Sbjct: 233 APMEPFDYPQNNPGPHTL-VTGAPDGGADDLQWLMSRFSGYAGVMNYLGGRYTADEQALS 291
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
E A+RGL F DD ++P++L LAPK +LP+ D+ +D + I L LE
Sbjct: 292 GALAEIAQRGLFFLDDRAAPQSLITALAPKFSLPHAKVDVVIDARNTPQSIDAALAQLET 351
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AR G AIG A A +I ++++ + R +++ P+S
Sbjct: 352 QARDKGVAIGFANAVPATISRVARFARDLERRGIALAPVSA 392
>gi|27375546|ref|NP_767075.1| hypothetical protein blr0435 [Bradyrhizobium japonicum USDA 110]
gi|27348683|dbj|BAC45700.1| blr0435 [Bradyrhizobium japonicum USDA 110]
Length = 407
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 120/224 (53%), Gaps = 1/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIV+ GLG+ T AI LPA +TLAF G+ + + A+ + E LQIPM+ +
Sbjct: 185 VAIVIGGLGVGAAKTTDAIMKLPAAVTLAFTPYGSDPGKIAERARTQRHEIFLQIPMEPY 244
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL + + Q ++RL + L R GY G+ N+ GA ++ + + I +E
Sbjct: 245 DFPDNDPGPQTLLTSLSADQNMDRLYWHLSRMQGYAGITNFMGARFVATDAAMQPIIREA 304
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL FFDDGSSPR++ A +P+ D+ +D +I L LE AR G
Sbjct: 305 AKRGLGFFDDGSSPRSIAPQAAASQAMPFGKGDIAIDVVPTPAEIDRALNKLESAARERG 364
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AIG A A SIE I W + R + +VPL+ A L S SS
Sbjct: 365 TAIGTASALPVSIERIGAWTKTLGDRGILLVPLTT-AMLKSKSS 407
>gi|209883750|ref|YP_002287607.1| protein of unknown function, YibQ [Oligotropha carboxidovorans OM5]
gi|209871946|gb|ACI91742.1| protein of unknown function, YibQ [Oligotropha carboxidovorans OM5]
Length = 390
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 119/215 (55%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
I++V+ GLG+ T A+ LP +TLAF G+ + + A+ + E +LQ+PM+ +
Sbjct: 168 ISLVIGGLGVGSAKTNDAVLRLPGAVTLAFTPYGSDPGKLIARARAQKHEVLLQVPMEPY 227
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL T + +Q ++RL + + R GY G+ N+ G+ + + + + I +E
Sbjct: 228 DYPDNDPGPQTLLATASAEQNVDRLMWHMSRFQGYVGLANFMGSRFVVSDAAMQPIVQEA 287
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
A+RGL +FDDGS PR+L LA P ADL +D +I + L LE +AR G
Sbjct: 288 ARRGLAWFDDGSVPRSLAGQLAGAQGAPSTTADLVIDQVPTSAEIDKNLAKLENLARERG 347
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
A+G+A A SIE I W Q+ R + +VPL+
Sbjct: 348 TAVGMASALPVSIERIGAWAQRLENRGILLVPLTT 382
>gi|85713722|ref|ZP_01044712.1| hypothetical protein NB311A_04259 [Nitrobacter sp. Nb-311A]
gi|85699626|gb|EAQ37493.1| hypothetical protein NB311A_04259 [Nitrobacter sp. Nb-311A]
Length = 400
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 194/403 (48%), Gaps = 36/403 (8%)
Query: 4 DLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
DL+ PL + P+R+ + + + FLL +V L ++ +H +G E + V
Sbjct: 7 DLSMPLGQNSAPRRRLRFPFTLPQAAGFLLGSILVVFLG-FVFFNHDPLG--GEPVARVV 63
Query: 63 IREIAPIPLTIPLNIEDKQS--PSKRDNNTVCNQLKNDSSQHDGQIQNDISGK---TVVN 117
IR P++ E + P+ + ++ ++ + Q I + SG VV
Sbjct: 64 IRHT-------PVSDEKSAATRPASQQPDSAAVATRSATGQKTITIIDGSSGSRQDVVVA 116
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD--KNFCSNASGAR--- 172
P D+ E G+ ++ LL K++ G V A D K F + A G
Sbjct: 117 GPDS----DAADARSEAAATGIHQR-LLEKSRYGM--IPVVAADGLKAFKAYAMGTEADR 169
Query: 173 --------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+AIVVSGLGI T T AI LP+ +TLAF + + +++A+ + E +
Sbjct: 170 AKAATMPVVAIVVSGLGIGTTKTIDAIMKLPSAVTLAFTPYSSDPGKLVEQARAQHHEVL 229
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQ+PM+ D N+ TL T Q ++RL + L R GY G+ N+ GA ++ +
Sbjct: 230 LQLPMEPHDYPDNDPGPQTLLTTLGTDQNIDRLHWQLSRFQGYVGLTNFMGARFVTAVAA 289
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ I +E AKRGL + DDG++P ++ LA +P++ ADL +D +I + L L
Sbjct: 290 MQPIIREAAKRGLGYLDDGTAPTSVAGQLAKGQAMPFIKADLTIDAVPTSVEIDKTLARL 349
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
EE+A+ G A+G+ A SI+ + W++ R V +VPL+
Sbjct: 350 EELAKGRGTAVGMTSALPVSIDRVGAWIKGLESRGVMLVPLTT 392
>gi|299135455|ref|ZP_07028645.1| protein of unknown function DUF610 YibQ [Afipia sp. 1NLS2]
gi|298589863|gb|EFI50068.1| protein of unknown function DUF610 YibQ [Afipia sp. 1NLS2]
Length = 392
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
I+IV+ GLG+ T AI LPA +TLAF G+ + ++ A+ + E +LQ+PM+ +
Sbjct: 170 ISIVIGGLGVGAAKTNDAIVKLPAAVTLAFTPYGSDPGKLVERARARKHEVLLQLPMEPY 229
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL T +Q ++RL + + R GY G+ N+ G+ L + + I ++
Sbjct: 230 DYPDNDPGPQTLLATAGPEQNVDRLMWLMSRFQGYVGLTNFMGSRFLVTDSAMQPIIQQA 289
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL + DDGS PR+L LA +P AD LD +I + L LE +AR G
Sbjct: 290 AKRGLAWLDDGSVPRSLAGQLAGAQGVPTATADAVLDQVPTAAEIDKSLMKLETLARERG 349
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
A+G+A A SIE I W Q+ R + +VPL+
Sbjct: 350 SAVGMASALPISIERIGAWAQRLESRGILLVPLTT 384
>gi|328545770|ref|YP_004305879.1| Divergent polysaccharide deacetylase family [polymorphum gilvum
SL003B-26A1]
gi|326415510|gb|ADZ72573.1| Divergent polysaccharide deacetylase family [Polymorphum gilvum
SL003B-26A1]
Length = 375
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 131/220 (59%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S +IAIV+ G+G+S+ G++ A++ LPA++TLA A GN ++ WM+EA++ G E +LQ+
Sbjct: 149 GSTPKIAIVIGGIGLSEAGSRNALDSLPADVTLALAPYGNEIEGWMQEARQAGHELLLQL 208
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P++ FD N+ +TL V+ + ++RL + L R T Y GV+N+ GA S + S +
Sbjct: 209 PLEPFDFPDNDPGPHTLLVSLRGAEFMDRLTWLLSRTTNYVGVVNFMGARFSSTEASMQY 268
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +E +RGL++ DDGSS R++ + +A P+ D+ LD D+I +L LE +
Sbjct: 269 LLEEVTRRGLMYVDDGSSSRSVAQPVASAAQTPFSKVDVVLDAVPKPDEINARLLQLEAL 328
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AR G A+ A ++ ++ W + R + +VP+S
Sbjct: 329 ARARGIAVAAGSALPVTVRQLADWSRDLEQRGLMLVPISA 368
>gi|188581495|ref|YP_001924940.1| hypothetical protein Mpop_2243 [Methylobacterium populi BJ001]
gi|179344993|gb|ACB80405.1| protein of unknown function DUF610 YibQ [Methylobacterium populi
BJ001]
Length = 399
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+G RIA++VSGLGI + T AI LPA ++LA + G+ L++ A++ G E +LQ+P
Sbjct: 165 TGPRIAVLVSGLGIGENATLGAIARLPAAVSLALSPYGSDLEKTAARAREAGHEVLLQLP 224
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ FD ++ TL + + L+R +++ R G+ G +N+ GA L+S+ + E +
Sbjct: 225 MEPFDYPDSDPGPQTLLASSRPGENLDRTAWAMSRFPGFVGAVNFMGAKLMSDPTALEPV 284
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
K+ A RGL F DDG++ + +A K LP AD+ +D D I +L LE +A
Sbjct: 285 LKDLAARGLGFVDDGAASASQVAGVAAKTKLPTARADIVVDAVARPDAIDAELARLETLA 344
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC-------LAKLSS 393
R G + A A SI+ +S+W + R + +VP+S +AKLSS
Sbjct: 345 RRNGLVLASASASPLSIDRLSRWSRDLEARGIRLVPVSAVLRRPGGVAKLSS 396
>gi|218530515|ref|YP_002421331.1| hypothetical protein Mchl_2561 [Methylobacterium chloromethanicum
CM4]
gi|218522818|gb|ACK83403.1| protein of unknown function DUF610 YibQ [Methylobacterium
chloromethanicum CM4]
Length = 401
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 123/220 (55%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+G RIA++VSGLGI + T AI LPA ++LA + G L++ A++ G E +LQ+P
Sbjct: 167 TGPRIAVLVSGLGIGEMATLGAIARLPAAVSLALSPYGTDLEKTAARAREAGHEILLQLP 226
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ FD ++ TL + + L+R +++ R G+ G +N+ GA L+S + E +
Sbjct: 227 MEPFDYPDSDPGPQTLLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPV 286
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
K+ + RGL F DDG++P +A K LP + A++ +D D I +L LE +A
Sbjct: 287 LKDLSARGLGFVDDGAAPGTQVATVAAKTKLPSVRAEIVIDAVARPDAIDAELARLETLA 346
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G + + A +IE +S+W + R + +VP+S +
Sbjct: 347 RQKGLVLASSSASPLTIERLSRWSRDLEARGIRLVPVSAI 386
>gi|254470624|ref|ZP_05084027.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211959766|gb|EEA94963.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 387
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 121/217 (55%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
ARIAI+++G+G++ T +AI LPA+I+L + G+ ++ WM+ A+ G E +LQ PM+
Sbjct: 165 ARIAILINGIGLNSDMTIKAIEDLPADISLGLSPYGDDVNSWMESARLSGHEVLLQAPME 224
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
FD N+ +L +Q RL + L + + Y G++N+ G SN+
Sbjct: 225 PFDYPDNDAGPQSLLTNLDQKQNDERLSWVLGQTSNYVGLVNFMGDRFTSNETRMSEFLS 284
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ RGL++ DDGSSPR+ +A +P++ ADL LD + + I +L LE IAR
Sbjct: 285 KVRDRGLMYVDDGSSPRSKAGQVAGTQKVPFVQADLVLDQNLSAEAIGTQLLELETIARQ 344
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
G A+ A AF ++ + W Q+ R +S+VP+S
Sbjct: 345 RGIAVATATAFPVTLNALEAWSQRLEERGLSLVPVSS 381
>gi|163851709|ref|YP_001639752.1| protein of unknown function DUF610 YibQ [Methylobacterium
extorquens PA1]
gi|163663314|gb|ABY30681.1| protein of unknown function DUF610 YibQ [Methylobacterium
extorquens PA1]
Length = 418
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+G RIA++VSGLGI + T AI LPA ++LA + G L++ A++ G E +LQ+P
Sbjct: 184 TGPRIAVLVSGLGIGEMATLGAIARLPAAVSLALSPYGTDLEKTATRAREAGHEILLQLP 243
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ FD ++ TL + + L+R +++ R G+ G +N+ GA L+S + E +
Sbjct: 244 MEPFDYPDSDPGPQTLLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPV 303
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
K+ + RGL F DDG++P +A K LP A++ +D D I +L LE +A
Sbjct: 304 LKDLSARGLGFVDDGAAPGTQVATVAAKTKLPSARAEIVIDAVARPDAIDAELARLETLA 363
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G + + A +IE +S+W + R + +VP+S +
Sbjct: 364 RQKGLVLASSSASPLTIERLSRWSRDLEARGIRLVPVSAI 403
>gi|240138873|ref|YP_002963348.1| hypothetical protein MexAM1_META1p2287 [Methylobacterium extorquens
AM1]
gi|240008845|gb|ACS40071.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 409
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+G RIA++VSGLGI + T AI LPA ++LA + G L++ A++ G E +LQ+P
Sbjct: 175 TGPRIAVLVSGLGIGEMATLGAIARLPAAVSLALSPYGTDLEKTATRAREAGHEILLQLP 234
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ FD ++ TL + + L+R +++ R G+ G +N+ GA L+S + E +
Sbjct: 235 MEPFDYPDSDPGPQTLLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPV 294
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
K+ + RGL F DDG++P +A K LP A++ +D D I +L LE +A
Sbjct: 295 LKDLSARGLGFVDDGAAPGTQVATVAAKTKLPSARAEIVIDAVARPDAIDAELARLETLA 354
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G + + A +IE +S+W + R + +VP+S +
Sbjct: 355 RQKGLVLASSSASPLTIERLSRWSRDLEARGIRLVPVSAI 394
>gi|254561481|ref|YP_003068576.1| hypothetical protein METDI3068 [Methylobacterium extorquens DM4]
gi|254268759|emb|CAX24720.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 409
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+G RIA++VSGLGI + T AI LPA ++LA + G L++ A++ G E +LQ+P
Sbjct: 175 TGPRIAVLVSGLGIGEMATLGAIARLPAAVSLALSPYGTDLEKTAARAREAGHEILLQLP 234
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ FD ++ TL + + L+R +++ R G+ G +N+ GA L+S + E +
Sbjct: 235 MEPFDYPDSDPGPQTLLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPV 294
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
K+ + RGL F DDG++P +A K LP A++ +D D I +L LE +A
Sbjct: 295 LKDLSARGLGFVDDGAAPGTQVATVAAKSKLPSARAEIVIDAVARPDAIDAELARLETLA 354
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G + + A +IE +S+W + R + +VP+S +
Sbjct: 355 RQKGLVLASSSASPLTIERLSRWSRDLEARGIRLVPVSAI 394
>gi|170742352|ref|YP_001771007.1| hypothetical protein M446_4224 [Methylobacterium sp. 4-46]
gi|168196626|gb|ACA18573.1| protein of unknown function DUF610 YibQ [Methylobacterium sp. 4-46]
Length = 396
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 3/231 (1%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
E PA+ A RIA+VV+GLGI TQ A+ LP +TLAFA G + R
Sbjct: 162 EAPALPSG---AAPAGRIALVVTGLGIGAAVTQDAVTRLPPAVTLAFAPYGADVGRQAAR 218
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A++ G E ++Q PM+ FD N+ TL + +RL + L R G GV+NY G
Sbjct: 219 AREAGHEVMVQAPMEPFDYPDNDPGPQTLLAGAKPAENADRLGFVLSRIPGAIGVVNYMG 278
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
A L + + + I +E RGL F DDG+SPR+L + + P AD+ +D D
Sbjct: 279 ARLTAEAGALDPILREIGARGLGFVDDGTSPRSLALDIGRRARAPVARADVVVDAAPLPD 338
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
+ +L LEE AR G A+G A+A +I+ I++W + R + +VP S
Sbjct: 339 AVDRELARLEETARRKGFAMGSAMALPLTIDRIARWSRDLEARGILLVPAS 389
>gi|75674648|ref|YP_317069.1| hypothetical protein Nwi_0450 [Nitrobacter winogradskyi Nb-255]
gi|74419518|gb|ABA03717.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255]
Length = 400
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 189/401 (47%), Gaps = 32/401 (7%)
Query: 4 DLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
DL+ PL + P+R+ + + LL +V L ++ +H +G E
Sbjct: 7 DLSTPLGQNPAPRRRLRLPFSLPQATGLLLGSILVVFLG-FVFFNHDPLG--GEPKARVA 63
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK---TVVNKP 119
IR+ AP+ P I + P + D+ V N Q I + SG VV+ P
Sbjct: 64 IRQ-APVSDDKPTAI--RPPPQQPDSAAVTAPSAN--GQKTITIIDGSSGSRQDVVVSGP 118
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD--KNFCSNASGAR----- 172
D+ + ++G+ ++ LL K++ G V A D K F + A+G
Sbjct: 119 ----GPDAADAGSAKAVVGVDQR-LLEKSRHGM--IPVAAADGLKPFKAYAAGTEADRAK 171
Query: 173 ------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+AIVV GLG+ T T AI LP +TLAF G+ R + +A+ + E +LQ
Sbjct: 172 AAKMPVVAIVVGGLGVGATKTTDAIMKLPPAVTLAFTPYGSDPGRLVAQARAQRHEVLLQ 231
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM+ +D N+ TL T +Q ++RL + L R GY G+ N+ GA ++ +
Sbjct: 232 VPMEPYDYPDNDPGPQTLLTTLGAEQNIDRLHWQLSRFQGYVGLTNFMGARFVAAAAVMQ 291
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
E A+RGL + DDG++P ++ LA +P+ ADL +D +I + L LE+
Sbjct: 292 PFMHEAARRGLGYLDDGAAPLSVAGRLAEGQAMPFARADLIVDAVPTSVEIDKALARLED 351
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+A G AIG+ A S++ I W++ R V +VPL+
Sbjct: 352 LAMKRGVAIGMTSALPVSVDRIGVWIKSLESRGVMLVPLTT 392
>gi|114799786|ref|YP_761883.1| hypothetical protein HNE_3208 [Hyphomonas neptunium ATCC 15444]
gi|114739960|gb|ABI78085.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 429
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 148 NKVGREDTEVPA--MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN 205
+V + ++ PA + F ++ +++V+ GLGI+ T T+ AI+ LPA++TL+FA +
Sbjct: 156 EQVSKPASKAPADIYARPFSNSGGQPVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPD 215
Query: 206 GNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGT 265
LD W+K A++ G E ++++PM+AF+ TL + L +L L R +
Sbjct: 216 AKRLDYWIKTAREDGHEVLIEVPMEAFEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRAS 275
Query: 266 GYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVAD 325
GY+GV+NY+GA ++ S IF A+RGL F DDGS + +A L + A
Sbjct: 276 GYYGVINYQGAKFGADAGSIAPIFDVLAERGLAFVDDGSVHKAFFGQVADTKGLRFARAA 335
Query: 326 LYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
+D + I + LE IAR G AIG AF +IE S W+ + + + P+
Sbjct: 336 GPIDTRQSPQDIAAEFMELETIARQHGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPV 395
Query: 386 SCLAKLSSP 394
S L ++P
Sbjct: 396 SFLVPDAAP 404
>gi|146337569|ref|YP_001202617.1| hypothetical protein BRADO0424 [Bradyrhizobium sp. ORS278]
gi|146190375|emb|CAL74371.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 405
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 116/215 (53%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIV+ GLGI T AI LP +TLAF G+ + + A+ + E +LQ+PM+ +
Sbjct: 183 VAIVIGGLGIGAAKTVDAIMKLPPAVTLAFTPYGSDPSKLAERARAQRHEILLQVPMEPY 242
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL T Q ++RL + + R GY G+ N+ GA ++ + + + I E
Sbjct: 243 DYPDNDPGPQTLLATLGPDQNIDRLFWHMSRLQGYVGIGNFMGARFVATETAMQPIVNEA 302
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL FDDG++PR++ LA +P+ D+ +D +I L LE +A+ G
Sbjct: 303 AKRGLALFDDGAAPRSVAASLATGRAVPFAKGDVAIDAVPTAVEIDNALAKLESLAKERG 362
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
A+G A A SI+ I W++ + + +VPL+
Sbjct: 363 VAVGTASALPVSIDRIGTWIKGLDRKGILLVPLTT 397
>gi|197103709|ref|YP_002129086.1| hypothetical protein PHZ_c0243 [Phenylobacterium zucineum HLK1]
gi|196477129|gb|ACG76657.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 379
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 10/238 (4%)
Query: 151 GREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
GR EV A + F SN +I +VV GLG++ T++AI L ITL+F L
Sbjct: 148 GRTPAEVYA--RPFTSNGR-PKIGLVVGGLGLNARATRQAIETLRPEITLSFVVYAEGLQ 204
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
W+ A+ G E +L+ P++ D N+ YTL + + +L + L R +GYFG+
Sbjct: 205 GWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMTDASPPETAKKLEWILSRASGYFGL 264
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
NY G+ L++ + E + RGL F DDG++ R N+P A+ +DD
Sbjct: 265 TNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAARR-------GGNVPRATAERVIDD 317
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
Q+ I ++L LE A GQA+G A+ ++E +++W + R + P S L
Sbjct: 318 QLSAGAIDQQLLALEAGALQRGQALGSGFAYPVTLETVARWANEVEQRGYQLAPASAL 375
>gi|148252020|ref|YP_001236605.1| hypothetical protein BBta_0413 [Bradyrhizobium sp. BTAi1]
gi|146404193|gb|ABQ32699.1| hypothetical protein BBta_0413 [Bradyrhizobium sp. BTAi1]
Length = 407
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIV+ GLG+ T AI LP +TLAF G + + A+ + E +LQ+PM+ +
Sbjct: 185 VAIVIGGLGVGAAKTVEAIMKLPPAVTLAFTPYGADPTKLAERARAQRHEILLQVPMEPY 244
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL T Q ++RL + + R GY G+ N+ GA ++ + + + I E
Sbjct: 245 DYPDNDPGPQTLLATLGPDQNIDRLFWHMSRLQGYVGIGNFMGARFVATEAAMQPIVNEA 304
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
AKRGL FDDG++PR++ LA +P+ D+ +D +I L LE +A+ G
Sbjct: 305 AKRGLALFDDGAAPRSVAASLAAGRAMPFAKGDVAIDAVPTPVEIDNALAKLESLAKERG 364
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AIG A A SI+ I W++ + + +VPL+
Sbjct: 365 IAIGTASALPVSIDRIGAWIKGLDRKGILLVPLTT 399
>gi|83944752|ref|ZP_00957118.1| hypothetical protein OA2633_08994 [Oceanicaulis alexandrii
HTCC2633]
gi|83851534|gb|EAP89389.1| hypothetical protein OA2633_08994 [Oceanicaulis alexandrii
HTCC2633]
Length = 405
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 4/238 (1%)
Query: 161 DKNFCSNASGAR----IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
D+ + + GA ++++V GLG+SQ+ T+RAI +LPA +TL+FA ++L W+ A
Sbjct: 135 DQAYAHDFPGAENVPTVSVIVGGLGLSQSLTERAIEVLPAEVTLSFAPYADNLQDWINRA 194
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+ G E +L++PM+ FD N+ +TL V + Q+ RL + L R GY GV NY GA
Sbjct: 195 RADGHEVLLELPMEPFDYPNNDPGPHTLLVDASSQENTRRLVWLLSRAAGYTGVANYLGA 254
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
L + + IF E RGL F DG+ R + + + +AD +D
Sbjct: 255 RLGAAEGPLSEIFSELEARGLSIFHDGAGRRAVLEQAGRQAHARMTIADRVVDSDPTPRA 314
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
I +L LE +A G A+G A+ +++ I+ W + R + P S + ++ SP
Sbjct: 315 IDGRLLELEALALQNGSALGSGFAYPATVDTIAAWAEGLDGRGYQLAPASFVMQIRSP 372
>gi|254292534|ref|YP_003058557.1| hypothetical protein Hbal_0158 [Hirschia baltica ATCC 49814]
gi|254041065|gb|ACT57860.1| protein of unknown function DUF610 YibQ [Hirschia baltica ATCC
49814]
Length = 416
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 139/272 (51%), Gaps = 7/272 (2%)
Query: 129 PTIEERLILGLSKKELLAKN-KVGR-----EDTEVPAMDKNFCSNASG-ARIAIVVSGLG 181
P EER L + + L +N VGR +D PA +G ++A++V GLG
Sbjct: 133 PVSEERKALVRAPIQGLYENGAVGRLPKIADDGRRPADIYARPHTPNGKPQVALIVGGLG 192
Query: 182 ISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDS 241
I ++ T +AIN LP +TL+F + L W+ A+ G E +L++PM+ +D +
Sbjct: 193 IKRSLTMQAINDLPPEVTLSFVPYSSDLQTWVNRARDAGHEVLLEVPMEPYDYPNVDTGP 252
Query: 242 YTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFD 301
TL T + Q+ RL+ L + TGYFGV+NY+GA L + I +E RGL
Sbjct: 253 DTLLTTLSAQENERRLKVILGQTTGYFGVINYQGARLATESRVLSPIMREIHNRGLAMIY 312
Query: 302 DGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAF 361
DG++ R++ +A ++N+ ++ AD +D D I + L +E +A A+GV AF
Sbjct: 313 DGAANRSVFPSVAKEINMNFVEADRIVDTVPSADAIDKNLLHIEALALQNKAALGVGFAF 372
Query: 362 DESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+++ QW ++ +VP S L + +
Sbjct: 373 PVTVDQFKQWSDTLDMKGYELVPASVLTGIQT 404
>gi|329847637|ref|ZP_08262665.1| divergent polysaccharide deacetylase family protein [Asticcacaulis
biprosthecum C19]
gi|328842700|gb|EGF92269.1| divergent polysaccharide deacetylase family protein [Asticcacaulis
biprosthecum C19]
Length = 405
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 7/216 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A++V GLG++ T T++AI+ LP +TL+F L W+ A+ G E I+++PMQ
Sbjct: 194 VALIVGGLGLNPTATRQAIDQLPPEVTLSFVPYTQGLQGWIDLARASGHEVIVEVPMQPT 253
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + TL +L N+L +SL R TG+F V NY+G+ L +K A+
Sbjct: 254 NYPDTDPGPQTLMANAKSDELQNKLAWSLSRATGFFAVSNYQGSAFLKDKAGAQTFMSVL 313
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
RG+ F DDG + R L + AD +D Q++ I+ +L GLE A+ G
Sbjct: 314 KSRGVAFIDDGQA-RGLQGAWS------RASADRVIDSQINAQAIQAQLIGLETTAKNRG 366
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+G + ++ V +W Q + + + P S L
Sbjct: 367 SALGTGFGYPVTLAVALRWTQSLEAKGIQLAPASAL 402
>gi|295687690|ref|YP_003591383.1| hypothetical protein Cseg_0245 [Caulobacter segnis ATCC 21756]
gi|295429593|gb|ADG08765.1| protein of unknown function DUF610 YibQ [Caulobacter segnis ATCC
21756]
Length = 393
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 8/236 (3%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
T A + F N ++++V+ GLG++ T+ AI LPA ITL+FA L W+
Sbjct: 165 TAADAYARPFTPNGR-PKVSVVIGGLGLNAQTTRAAIETLPAEITLSFAPYAEGLQGWID 223
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
A++ G E +L+ PM+ D N+ YTL + + +L + + R TGYFG+ NY
Sbjct: 224 LAREHGHEVLLETPMEPADYPANDPGPYTLIAANRPEDTVRKLEWLMSRATGYFGLANYL 283
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
GA + N ++ RGL F DDG + R + P AD +DD++
Sbjct: 284 GARFVDNDQAMATFNTVLKTRGLAFIDDGLAARRSGPI-------PRASADRVIDDELSA 336
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
I +L+ LE A GQ++G A+ +I + W R + + P S LA
Sbjct: 337 SAIDAQLRALENGASARGQSLGSGFAYPVTINQVRLWAAGLQARGLQLAPASALAH 392
>gi|16127669|ref|NP_422233.1| hypothetical protein CC_3439 [Caulobacter crescentus CB15]
gi|221236488|ref|YP_002518925.1| hypothetical protein CCNA_03552 [Caulobacter crescentus NA1000]
gi|13425155|gb|AAK25401.1| hypothetical protein CC_3439 [Caulobacter crescentus CB15]
gi|220965661|gb|ACL97017.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 394
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
Query: 151 GREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
GR E A + F N +++IV+ GLG++ T+ AI LP +TL+FA L
Sbjct: 164 GRTAAE--AYARPFTPNGR-PKVSIVIGGLGLNAQTTRAAIETLPGEVTLSFAPYAEGLQ 220
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
W+ A+ G E +L+ PM+ D N+ YTL + +L + + R TGYFG+
Sbjct: 221 GWIDLARAHGHEVLLETPMEPADYPANDPGPYTLIAANRPDDTVRKLEWLMSRATGYFGL 280
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
NY GA + N ++ RGL F DDG + R + P AD +DD
Sbjct: 281 SNYLGARFVDNDQAMNTFNATLKARGLAFIDDGLAARRAGPI-------PRASADRVIDD 333
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++ I +L+ LE A GQ++G A+ +I + W R + + P S LA
Sbjct: 334 ELSASAIDAQLRALETGAAARGQSLGSGFAYPVTINQVRAWAAGLQARGIQLAPASALAH 393
>gi|288959172|ref|YP_003449513.1| hypothetical protein AZL_023310 [Azospirillum sp. B510]
gi|288911480|dbj|BAI72969.1| hypothetical protein AZL_023310 [Azospirillum sp. B510]
Length = 391
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 2/241 (0%)
Query: 151 GREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
GR+ +V A + F + R+AIV+S LG+S T A+ LP ITLAF LD
Sbjct: 151 GRKPWQVYA--RPFPATDKRPRVAIVMSDLGLSGVTTGNALAKLPPGITLAFLPYAERLD 208
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
W++ A+ KG E +L +PM+ ++ L + + RL +SL + GY GV
Sbjct: 209 DWVERARTKGHEVMLSLPMEPLTYPRDDPGPNALLTMLGPDRNIERLEWSLGKAVGYVGV 268
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+ G +N + + + RGLL D +P+++ LA +P + D +D
Sbjct: 269 TSTTGGKFTANPTAMQPVIDALKARGLLLVDSRVNPKSVAGPLAMLAGVPRALGDRVIDR 328
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ R I ++L+ LEE+ART G A+G A + +IE ++ WL R +++ P+S +
Sbjct: 329 DLSRGAIDDQLRELEELARTNGAAVGFASPYPTTIERLNLWLTALADRGIALAPVSAVVN 388
Query: 391 L 391
+
Sbjct: 389 I 389
>gi|315497340|ref|YP_004086144.1| hypothetical protein Astex_0295 [Asticcacaulis excentricus CB 48]
gi|315415352|gb|ADU11993.1| protein of unknown function DUF610 YibQ [Asticcacaulis excentricus
CB 48]
Length = 410
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 121/243 (49%), Gaps = 18/243 (7%)
Query: 154 DTEVPA--MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDR 211
D VPA + F SN ++++V GLG++ T T+ AI LPA +TL+F + L
Sbjct: 179 DGRVPASAYARPFKSNGK-PMVSLIVGGLGLNPTTTKAAIEQLPAEVTLSFVPHAEGLQG 237
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
W+ A+ +G E +++IPM+ + + TL V Q + L + + R TGYFGVM
Sbjct: 238 WIDAARAQGHEVLIEIPMEPTNYPDTDPGPRTLLVGQRPDDMNASLNWLMARATGYFGVM 297
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNL----TRVLAPKLNLPYMVADLY 327
NY+G+ L +K S RGL F DDG + R++ TR AD
Sbjct: 298 NYQGSAYLRDKGSMTAFLNVMKARGLAFIDDGQA-RDVGGGWTRA----------SADRV 346
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+D Q++ I +L +E A+ G+A+G A+ ++ V +W Q + + + P S
Sbjct: 347 IDAQINSQSINAQLAAIEAQAKARGRALGSGFAYPVTLAVAIKWTQSLEQKGLQLAPASA 406
Query: 388 LAK 390
+ +
Sbjct: 407 IMR 409
>gi|167648681|ref|YP_001686344.1| hypothetical protein Caul_4726 [Caulobacter sp. K31]
gi|167351111|gb|ABZ73846.1| protein of unknown function DUF610 YibQ [Caulobacter sp. K31]
Length = 395
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 151 GREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
GR E A + F ++ ++A+V+ GLG++ T+ AI LP ITL+FA L
Sbjct: 165 GRTAAE--AYARPFTADGR-PKVALVIGGLGLNPQTTRAAIETLPPEITLSFAPYAEGLQ 221
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
W+ A+ G E +L+ PM+ D N+ YTL + + +L + + R TGYFG+
Sbjct: 222 GWIDLARSHGHEVLLEAPMEPVDYPANDPGPYTLITANRPEDTVRKLEWLMSRATGYFGL 281
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
NY G+ +++ + RGL F DDG + + P AD +DD
Sbjct: 282 TNYLGSRFVTSDTAMTTFTLALKSRGLAFIDDGQASLRGGPI-------PRASADRIIDD 334
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++ I +LK LE A GQA+G A+ +I + W R + + P S +AK
Sbjct: 335 ELAAGSIDGQLKMLETGAAGRGQALGSGFAYPVTITQVRLWAAGLSGRGLQLAPASAMAK 394
>gi|218658574|ref|ZP_03514504.1| hypothetical protein RetlI_02356 [Rhizobium etli IE4771]
Length = 170
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 79/116 (68%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A G RIAIVVSGLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA++ G E +L
Sbjct: 34 SGARGIRIAIVVSGLGLSQTGTQRAITELPEEITLAFAASGNSLQRWMQEARRGGHEILL 93
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
Q+P++ FD N+ TL ++ V + + L ++ T Y G+MNY G LS+
Sbjct: 94 QVPLEPFDYPANDPGPETLLTSKPVARNIENLHKAMGEITNYTGIMNYLGGRFLSD 149
>gi|296445175|ref|ZP_06887135.1| protein of unknown function DUF610 YibQ [Methylosinus trichosporium
OB3b]
gi|296257349|gb|EFH04416.1| protein of unknown function DUF610 YibQ [Methylosinus trichosporium
OB3b]
Length = 402
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 119/222 (53%), Gaps = 3/222 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A RIA+VV G+G++ + RAI+ LPA +TLA A G +++ A+ +G E +L
Sbjct: 170 AGAPRIALVVGGVGLNARLSDRAIDELPAAVTLALAPYGAAVEATAARARARGHEILLHA 229
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ +D +TL+ L L + + R TGY GV+N+ GA + +
Sbjct: 230 PMEPYDFPVENPGPHTLRAGSDA---LGDLHWLMSRFTGYVGVVNFLGARFTAEAGALRP 286
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + A RGLL+ DDG+SPR+L LA L L AD +D + +I +L LE +
Sbjct: 287 VLADIAARGLLYIDDGASPRSLAPSLASGLGLASARADAAIDARAKPQEIDAQLTQLEAL 346
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
AR GQAI VA A I +S + + R +++VP+S LA
Sbjct: 347 ARRNGQAIAVAEALPGVIARLSHFARDLERRGIALVPVSALA 388
>gi|254420794|ref|ZP_05034518.1| Divergent polysaccharide deacetylase family [Brevundimonas sp.
BAL3]
gi|196186971|gb|EDX81947.1| Divergent polysaccharide deacetylase family [Brevundimonas sp.
BAL3]
Length = 396
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD--KNFCSNAS 169
G TV + S + + + + I GLS+ + D VPA + F SN
Sbjct: 120 GATVAGGASYSAPVQAASPLAKAPIAGLSQPGASGPLPMIAPDGRVPAQAYARPFRSNGK 179
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+A++V GLG++ T+ AI LP +TL+F ++L W+ +A+ +G E +L++PM
Sbjct: 180 -PRVALIVGGLGLNAVTTRAAIERLPPEVTLSFVPYADNLQSWIDQARAQGHEVMLEMPM 238
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ N+ YTL + T + ++ + L R GYFGV NY G ++
Sbjct: 239 EPTGYPDNDPGPYTLLASGTPDDVQAKMDWLLGRAVGYFGVTNYLGDRFATSDTGMSAFL 298
Query: 290 KEFAKRGLLFFDDGS---SPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+RG+ F DDGS P R AD +D I L LE
Sbjct: 299 STLRQRGIAFLDDGSFQRRPGAWARA----------SADKVIDQTQSPAAIIAALNSLEA 348
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ G A+G ++ ++E ++W R + + P S +
Sbjct: 349 QAKLRGSALGTGFSYPVTVEAAARWTAGLEQRGLQLAPASAM 390
>gi|144898156|emb|CAM75020.1| Protein of unknown function DUF610 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 222
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IA+V+ LG+ + ++R + LPA +TLA+ + ++L + A+++G E ++ +PMQ
Sbjct: 2 IAVVIDDLGVDRKRSER-VTTLPAPLTLAWMTYADNLRPITQAARQRGHELMVHVPMQPQ 60
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
ESY+ L+V ++L RLR+ L R G+ G+ N+ G+ +++ V+ E
Sbjct: 61 SESYDPGPD-VLEVGLPTEELRRRLRWGLSRFDGFVGINNHMGSRFTADRAGMNVVMDEI 119
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
RGLLF D ++ +++ LA + +P+ ++LD+++ +R +L E AR G
Sbjct: 120 RARGLLFLDSVTTQKSVAPDLARQYGVPFAARHVFLDNEMTVSAVRGQLAKTEAYARKYG 179
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AI + D +IE ++ WL + +VP++ + K
Sbjct: 180 AAIAIGHPHDGTIEALAGWLPGLEAKGFVLVPVTTIVK 217
>gi|163792328|ref|ZP_02186305.1| hypothetical protein BAL199_15813 [alpha proteobacterium BAL199]
gi|159182033|gb|EDP66542.1| hypothetical protein BAL199_15813 [alpha proteobacterium BAL199]
Length = 418
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 118/228 (51%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ F + S R+AIV+ G+G + T++A LLP I+L+F+ +++ M A++ G
Sbjct: 185 RPFNLDDSRPRVAIVMIGVGFGKDITEKATTLLPGAISLSFSPYVRNIEALMARARQAGH 244
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
E ++ +PM+ D ++ TL + ++ LNRL + L R GY GV + G+ +
Sbjct: 245 ETLIDLPMEPLDFPRDDPGPSTLLTSLSLVDNLNRLEWVLGRAPGYVGVTTWMGSQFTTV 304
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+++ + + +RGL+F D +S R++ LA + LP + ++D I L
Sbjct: 305 EDALMPVLQGLRQRGLMFVDSRASSRSIATELASSIQLPRAFNNTFIDQTPSAGTIDRAL 364
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
LE AR A+G+A +IE +S+W + +++ P+S +A
Sbjct: 365 ASLEATARQQRYAVGIARPLPVTIERLSRWAGTLEGKGIALAPISAIA 412
>gi|302381253|ref|YP_003817076.1| hypothetical protein Bresu_0138 [Brevundimonas subvibrioides ATCC
15264]
gi|302191881|gb|ADK99452.1| protein of unknown function DUF610 YibQ [Brevundimonas
subvibrioides ATCC 15264]
Length = 399
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 16/260 (6%)
Query: 136 ILGLSKKELLAKNKVGREDTEVPAMD--KNFCSNASGARIAIVVSGLGISQTGTQRAINL 193
I GLS+ V D VPA + F N +A++V GLG++ T+ AI
Sbjct: 147 IAGLSQPGPQGFLPVIASDGRVPAQAYARPFRPNGK-PTVALIVGGLGLNAVTTRAAIER 205
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LPA++TL+F L W+ A+ +G E +++IPM+ + YTL T +
Sbjct: 206 LPADVTLSFVPYAEGLQGWINLARAQGHEVMIEIPMEPTGYPNTDPGPYTLLNNATPDDV 265
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS---PRNLT 310
++ + L R TGYFGV NY G +++ +RG+ F DDGS+ P
Sbjct: 266 QAKMAWLLGRATGYFGVTNYLGDRFVTSDTGMSAFLGILRQRGIAFLDDGSARRRPGAWA 325
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
R AD +D+ I L LE A++ G A+G A+ ++E ++
Sbjct: 326 RA----------SADSIIDETQTPAAIIGALNMLEATAKSRGAALGTGFAYPVTVEAAAR 375
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
W R + + P S + +
Sbjct: 376 WTAGLDARGLQLAPASAMTQ 395
>gi|163795616|ref|ZP_02189582.1| hypothetical protein BAL199_26487 [alpha proteobacterium BAL199]
gi|159179215|gb|EDP63748.1| hypothetical protein BAL199_26487 [alpha proteobacterium BAL199]
Length = 264
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 124/239 (51%), Gaps = 7/239 (2%)
Query: 154 DTEVPAMDKNFCSNASGAR----IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSL 209
D VPA + F + A A IAIV+ LGI + + RAI+L PA +TLAF + N L
Sbjct: 14 DGIVPAW-RRFAAVAEPANGRPMIAIVLDDLGIDKRRSGRAIDL-PAPLTLAFLAYANEL 71
Query: 210 DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFG 269
A+ +G E ++ +PMQ + + L + ++++ R+ +SL++ G+ G
Sbjct: 72 PEQTGRARSRGHELLVHLPMQPHGHDADPGPN-VLDMELGLEEVARRVDWSLKQFDGFVG 130
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
V N+ G++ N + ++ + GLLF D ++P+++ +A L +P D++LD
Sbjct: 131 VNNHMGSLFTENADGMRIVAEAMRNNGLLFLDSVTTPKSVGEQVARSLGVPATKRDVFLD 190
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ ++ +L E +ARTTG AI + D ++ V+ W+ + +VPL+ +
Sbjct: 191 NTDTAAEVELRLAQTERLARTTGTAIAIGHPRDATLNVLEAWIPKAKADGFVLVPLTAV 249
>gi|83593228|ref|YP_426980.1| hypothetical protein Rru_A1893 [Rhodospirillum rubrum ATCC 11170]
gi|83576142|gb|ABC22693.1| Protein of unknown function DUF610, YibQ [Rhodospirillum rubrum
ATCC 11170]
Length = 432
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IA+V+ +G+ + T++ + L +TLA+ + + L M+ +K G E ++ +PM+
Sbjct: 194 IALVIDDMGLDRVRTEK-VRKLAGPLTLAYLAYADGLAGQMRGGRKAGHEILMHMPMEPL 252
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N LKV + ++L RLR +L G + G+ N+ G+ ++ ++ E
Sbjct: 253 DAKVNPGPG-ALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTADSRGMTLVMGEL 311
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
KRGLL+ D +S ++ LA +P++ ++LD+ D+ + +L LE AR G
Sbjct: 312 KKRGLLWLDSMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQLAKLEAAARQHG 371
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+G+ D +I +S WL + +++VP+S L
Sbjct: 372 VAVGIGHPRDGTIGALSVWLPALAAKGITLVPISAL 407
>gi|193084246|gb|ACF09908.1| uncharacterized protein [uncultured marine group III euryarchaeote
KM3-28-E8]
Length = 394
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAIV+ LG+S +R I L P ITLAF +L + KE + G E I+ + M+
Sbjct: 173 IAIVMDDLGLSPKRVRRTIAL-PGPITLAFLPYARNLRKLAKEGRAAGHELIIHMNMEPK 231
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D + + L + ++ RL ++L + GY GV N+ G+ EV+ +
Sbjct: 232 DHDIDPGPN-ALLTSMDPMEIRERLLWALNQFDGYIGVSNHMGSRFTEWPNGMEVVIRAL 290
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGLL+FD +S +++ LA Y D++LD + + +L E+IAR G
Sbjct: 291 KRRGLLYFDSLTSTKSVGLTLARAHGTAYARRDVFLDHERFAKAVAWQLAQTEQIARRRG 350
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AI + +D + +V+ WL R +VPLS + +
Sbjct: 351 YAIAIGHPYDVTFDVLENWLPDAEARGFVMVPLSTIVR 388
>gi|218509896|ref|ZP_03507774.1| hypothetical protein RetlB5_21730 [Rhizobium etli Brasil 5]
Length = 234
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 116/241 (48%), Gaps = 29/241 (12%)
Query: 26 RLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP 83
RLG + C F I G S+Y AF G E + A L+ P Q+
Sbjct: 3 RLGRIAASLCLFAIGGFSLYT----AFRGEGLERAKPPATEQAASQTLSKPPTATADQA- 57
Query: 84 SKRDNNTVCNQLKNDSSQHDGQIQNDISG-KTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
N + + ++ I+G +VV K + S P + + + +G +
Sbjct: 58 --------ANGMPRADPRSGANVEQMITGDGSVVTKYSPHPRDGSGPVLVDAMQIGQDPR 109
Query: 143 ELLAKNKVGREDT---EVP--------AMDK--NFCSNASGARIAIVVSGLGISQTGTQR 189
N+ EDT +P MD+ S A G RIAIVVSGLG+SQTGTQR
Sbjct: 110 MAAQPNEALLEDTAFGRLPIVGPDGRRPMDQYARPSSGARGIRIAIVVSGLGLSQTGTQR 169
Query: 190 AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
AI LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL ++
Sbjct: 170 AIAELPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTSKP 229
Query: 250 V 250
V
Sbjct: 230 V 230
>gi|46201425|ref|ZP_00055095.2| COG2861: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 373
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 2/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAI++ LG+ + ++R + L +TL++ + + R +A+ G E ++ +PMQ
Sbjct: 149 IAIIIDDLGVDRRRSER-MAQLKGPLTLSYMTYAEDVARQSHDARAHGHELMVHVPMQPQ 207
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
SY+ + L+V +++ RL + L R GY G+ N+ G+ S+ V+ E
Sbjct: 208 SASYDPG-AEVLEVGLPPEEIRRRLDWGLSRFDGYVGINNHMGSRFTSDAAGMRVVMAEL 266
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGL F D +S + A +P+ ++LD+ +R +L E AR G
Sbjct: 267 RRRGLAFIDSVTSEHTVGAETARHYGVPFAARHVFLDNDQGVAHVRAQLAKTEAYARKHG 326
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AI + D +IE ++ WL R ++VP+S + ++ + +S
Sbjct: 327 AAIAIGHPHDGTIEALAGWLPGLEARGFALVPVSTIIRMGNGTS 370
>gi|83592567|ref|YP_426319.1| hypothetical protein Rru_A1231 [Rhodospirillum rubrum ATCC 11170]
gi|83575481|gb|ABC22032.1| Protein of unknown function DUF610, YibQ [Rhodospirillum rubrum
ATCC 11170]
Length = 582
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 9/230 (3%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ F +A+ R+AI+VSGLG+ + TQ AI LP ++TLAF +L WM +A++ G
Sbjct: 349 RPFTGDATRPRVAIIVSGLGMREAATQAAITRLPPDVTLAFDPYAPALPAWMGKARQSGH 408
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYS--LRRGTGYFGVMNYRGAMLL 279
E +L++P++ Y D L + + ++ NR R L R GY GV+
Sbjct: 409 ETLLELPVEP--TGYPAIDPGPLALLSGLSEIENRSRLETVLGRSGGYVGVLATAAGRFT 466
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGS-SPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
S + RGLL+ GS + N+ AP +N + +DD ++ I
Sbjct: 467 DTPASLRGLLDALKSRGLLYVHRGSPTAVNVNGDAAPPVN----IVTARIDDTPNQRAID 522
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+L+ L ++AR G AIGV A ++ +++WL + + P S +
Sbjct: 523 ARLEYLGQVARAQGYAIGVVGASPVALYRLNRWLGGLEGEGLVLAPASAV 572
>gi|83310908|ref|YP_421172.1| hypothetical protein amb1809 [Magnetospirillum magneticum AMB-1]
gi|82945749|dbj|BAE50613.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 374
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAI++ LG+ + ++R + L +TL++ + + +A+ +G E ++ +PMQ
Sbjct: 154 IAIIIDDLGVDRRRSER-MAQLKGPLTLSYMTYAEDVAHQSHDARARGHELMVHVPMQPQ 212
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
SY+ + L+V + ++ RL + L R GY G+ N+ G+ S+ V+ E
Sbjct: 213 SASYDPG-AEVLEVGLSSDEIRRRLDWGLSRFDGYVGINNHMGSRFTSDPAGMRVVMAEL 271
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGL F D +S R + A +P+ ++LD+ +R +L E AR G
Sbjct: 272 RRRGLAFIDSVTSERTVGAETARHYGVPFAARHVFLDNDQGVAHVRAQLAKTEAYARKHG 331
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AI + D +IE ++ WL R ++VP+S + ++ +
Sbjct: 332 AAIAIGHPHDGTIEALAGWLPGLEGRGFALVPVSTIIRMGN 372
>gi|170746547|ref|YP_001752807.1| protein of unknown function DUF610 YibQ [Methylobacterium
radiotolerans JCM 2831]
gi|170653069|gb|ACB22124.1| protein of unknown function DUF610 YibQ [Methylobacterium
radiotolerans JCM 2831]
Length = 411
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 6/222 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
SG RIAIVV+GLG+ Q T A LPA ++LAF G ++R A+ G E LQ+
Sbjct: 180 GSGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARARDAGHEVFLQL 239
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ FD ++ TL + +R +++ R GY GV+NY G+ L+++ + E
Sbjct: 240 PMEPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSKLMADA-AFEP 298
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAP--KLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ +E RGL F DDG++ + +AP K P A++ LD D I L E
Sbjct: 299 VLREIGARGLGFLDDGTASKP---AVAPANKGKTPVARAEIVLDATPRADAIDAALAQAE 355
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AR G A+ A S++ I++W ++ R + +VP S
Sbjct: 356 ARARANGFALVSATGTPLSVDRIARWAKEIESRGLRLVPASV 397
>gi|288958439|ref|YP_003448780.1| hypothetical protein AZL_015980 [Azospirillum sp. B510]
gi|288910747|dbj|BAI72236.1| hypothetical protein AZL_015980 [Azospirillum sp. B510]
Length = 375
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAIV+ +G+ + + R +L +TL++ L K A+ G E +L +PM+
Sbjct: 155 IAIVIDDMGLDRRRSTRMASLH-GPLTLSWLPYARDLSAQSKAARANGHELMLHMPMEPS 213
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
++ + L V+ +++ R R +L GY GV N+ G+ +++ + + E
Sbjct: 214 VKA--DPGPNALLVSLDKGEIVKRFRAALDSFDGYVGVNNHMGSRFTADRAALAPVLAEL 271
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGLL+ D ++P + LA +L +P++ D++LD+Q ++ +L E++A+ G
Sbjct: 272 HRRGLLWLDSRTTPNSAGIGLAQELKMPWVGRDVFLDNQETVAAVKAQLAKTEQVAKRQG 331
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ + D +IE ++ WL R +VP+S + +
Sbjct: 332 YAVAIGHPHDATIEALASWLPDVQKRGFVLVPVSAVVR 369
>gi|209963454|ref|YP_002296369.1| hypothetical protein RC1_0107 [Rhodospirillum centenum SW]
gi|209956920|gb|ACI97556.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 240
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 157 VPAMDKNFCSN--ASG-ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
+PA +N A G RI IV+ +G+ + R + L P +TLA+ L
Sbjct: 1 MPAWQRNAVPTPPAEGRPRIVIVIDDMGLDHRRSGRVVAL-PGPLTLAWLPYARDLPIQT 59
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
++A ++G E I+ +PM+ + L V Q+ +++ +RLR +L +GY G+ N+
Sbjct: 60 RQAHQRGHELIVHMPMEP--AGSGDPGPNALLVRQSPEEIRSRLRTNLDAFSGYVGINNH 117
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ ++ ++ V+ +E A+RGLL D ++ + R A + ++P D++LD
Sbjct: 118 MGSRFTADAAASAVVVEELARRGLLVLDSRTTADSRLRDEAVRRHVPSASRDVFLDHVQT 177
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ L+ +E AR G AI + D + E +++WL + +VPLS + + +
Sbjct: 178 PAAVSAALEKVEATARRQGLAIAIGHPHDVTTEALARWLPTLAGKGFQLVPLSAVVR-TG 236
Query: 394 PS 395
PS
Sbjct: 237 PS 238
>gi|117926782|ref|YP_867399.1| hypothetical protein Mmc1_3508 [Magnetococcus sp. MC-1]
gi|117610538|gb|ABK45993.1| protein of unknown function DUF610, YibQ [Magnetococcus sp. MC-1]
Length = 482
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 153 EDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRW 212
E VPA + +IA+++ LG + G R I LPA+ITLA G +
Sbjct: 239 EKKPVPAKHSHMV------KIAVIIDDLGYN-GGVGRGIVSLPADITLAVLPGGPYSRQL 291
Query: 213 MKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMN 272
+ A KKGQE IL PMQ L ++ L ++L R G+ N
Sbjct: 292 VNMAHKKGQEIILHQPMQPQGYPRVNPGPGALLEGMDADEIAEVLNHNLERFPEVVGINN 351
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ L N+ + K KR L F D +SPR++ A +P ++LD++
Sbjct: 352 HMGSALTENRVIMNDVMKVLVKRELYFIDSRTSPRSVAYRAALSHGVPRAKRSVFLDNKR 411
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
I ++L+ EEIA+ +G AI + + +++ + QWL R + VV S L
Sbjct: 412 TVAAILKRLQEAEEIAKRSGSAIAIGHPYGVTLQALKQWLPGLQARGIVVVRASNL 467
>gi|23015121|ref|ZP_00054907.1| COG2861: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 474
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD---------KNFCSNAS 169
P R + +LP KE+ + +G D VP+ D + + A
Sbjct: 206 PERKGEVKALPPA--------PNKEMQKRTAIG--DLPVPSPDGKQPWQVYARPWSGPAD 255
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++A+VV +G+ + T+ AI LP +TLAF+ LD+W+K+A+ G E ++ +P
Sbjct: 256 RGKVAVVVMDMGLDKVATEAAIAKLPPEVTLAFSPYAQGLDKWVKKARDYGHEVMMVLP- 314
Query: 230 QAFDESYNEDDSYTLKVTQTV--QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
A D L +T +V + L RL + RG Y G+++ S E
Sbjct: 315 -ADSNGTQPRDPGPLGMTNSVPPESNLARLEGVMSRGAAYTGLISLGDKFAAS--EQVVQ 371
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + RGLL+ G++P + T LAP + ADL+ R+ I +L +
Sbjct: 372 MLGQLRDRGLLYVGPGAAPADRTPALAPVTAV--ADADLF------REAIEMRLNQVSIA 423
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
ART G+A+ V S + + WL + + +VP+S L +
Sbjct: 424 ARTKGKALVVINPRPLSFDRLLPWLNDFDGQKLVIVPVSTLVQ 466
>gi|304322188|ref|YP_003855831.1| yibQ gene product [Parvularcula bermudensis HTCC2503]
gi|303301090|gb|ADM10689.1| yibQ gene product [Parvularcula bermudensis HTCC2503]
Length = 323
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
RIA+V+ +G S R +N LP +T+AF M +A +AI+ +PM+
Sbjct: 94 RIALVIDDMGYSWAAYDR-LNDLPVPLTMAFLPFSADAQE-MIDALWPRHDAIVHLPMEP 151
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
E++ L + L +L + GY GV N+ G+ +++ V+ E
Sbjct: 152 IAETHLAGPG-MLSTDMDADAIKWGLLAALSQLRGYSGVNNHTGSRFTADRARMAVVLGE 210
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLKGLEEIA 348
+RGL F D ++PR + ++A + +++LD D + ++R +L LE IA
Sbjct: 211 LNRRGLFFLDSITTPRPVAHLIAEAEGFSVLERNVFLDSDYDTLTSQQVRTQLAKLERIA 270
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++ GQAIG+ + +++V+ +W + R S+V + LA
Sbjct: 271 QSEGQAIGIGHPYAITLDVVERWAEDVEARGFSLVLVKDLA 311
>gi|83309401|ref|YP_419665.1| skin secretory protein xP2 precursor [Magnetospirillum magneticum
AMB-1]
gi|82944242|dbj|BAE49106.1| Skin secretory protein xP2 precursor [Magnetospirillum magneticum
AMB-1]
Length = 479
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 35/285 (12%)
Query: 121 RSTSIDSLPTI--EERLILGLSKKELLAKNKVGREDTEVPAMD---------KNFCSNAS 169
+ S + LP E + + KE+ + +G D VP+ D + + A
Sbjct: 203 KPPSYEGLPAHKGEVKALPPAPNKEMQKRTAIG--DLPVPSPDGKQPWQVYARPWSGPAD 260
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++A+VV +G+ + T+ AI LP +TLAF+ LD+W+K+A+ G E ++ +P
Sbjct: 261 RGKVAVVVMDMGLDKAATEAAIAKLPPEVTLAFSPYAQGLDKWVKKARDYGHEVMMVLPA 320
Query: 230 QAFDESYNEDDSYTLKVTQTV--QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA-E 286
A D L +T +V + L RL + RG Y G+++ L +K +A E
Sbjct: 321 DA--SGAQPRDPGPLGMTNSVPPESNLARLEGVMARGGAYTGLIS------LGDKFAASE 372
Query: 287 VIFKEFAK---RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
I + K GLL+ G++P + T LAP + ADL+ R+ I +
Sbjct: 373 QIVQTLGKLRDHGLLYVGPGAAPADRTPALAPVTAV--ADADLF------REAIEMRFNQ 424
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ ART G+A+ V S + + WL + + +VP+S L
Sbjct: 425 VSIAARTKGKALVVINPRPLSFDRLLPWLNDFDGQKLVIVPVSTL 469
>gi|258406280|ref|YP_003199022.1| hypothetical protein Dret_2160 [Desulfohalobium retbaense DSM 5692]
gi|257798507|gb|ACV69444.1| protein of unknown function DUF610 YibQ [Desulfohalobium retbaense
DSM 5692]
Length = 403
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA---SNGNSLDRWMKEAK 217
DK + S AR+AIV+ LG ++A L+ + L FA S ++ D A
Sbjct: 173 DKAEQNTKSQARLAIVIDDLG---EDVRKARRLIQTGLPLTFAVLPSCTHTRD-IASLAH 228
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
+ E +L PM+ + + L V Q+ L+ +L + G+ N+ G+
Sbjct: 229 EHNLELLLHQPMEPLSYPATDPGTGALFVGMNASQIRKTLKDNLAQIQHAVGLNNHMGSR 288
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
S+ F+ A R L F D +SP ++ R A + ++PY+ +++LD+ +R+ I
Sbjct: 289 FTSSSAGMRTTFRNIANRQLFFLDSLTSPDSVARETAKRTHVPYLRRNIFLDNTQNREAI 348
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+L+ E +A + G AI + ++ ++E I++W Q R V ++PLS L
Sbjct: 349 LYQLQKAERLALSRGSAIAIGHPYEATLEAIAKWKTQRDPR-VRLIPLSTL 398
>gi|218462232|ref|ZP_03502323.1| hypothetical protein RetlK5_23383 [Rhizobium etli Kim 5]
Length = 234
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 115/251 (45%), Gaps = 36/251 (14%)
Query: 1 MSIDLNHPL--RKKTPKRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISE 56
M DL+ PL +KT R+ + RLG + C F I G S+Y AF G E
Sbjct: 1 MGTDLHAPLGRNRKTASRRPG----VLRLGRIAASLCLFAIGGFSLYT----AFRGDGLE 52
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG-KTV 115
+ A + P + + + + ++ I+G +V
Sbjct: 53 RAKPPTAEQAA---------TQASGKPPTAAADQAADGMPRADPRSGANVEQMITGDGSV 103
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT---EVP--------AMDK-- 162
V K + S P + + + +G + N+ EDT +P MD+
Sbjct: 104 VTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTAFGRLPIVGPDGRRPMDQYA 163
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA-KKKGQ 221
S A G RIAIVVSGLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA ++ +
Sbjct: 164 RPSSGARGIRIAIVVSGLGLSQTGTQRAIAELPEEITLAFAASGNSLQRWMQEAPPRRPR 223
Query: 222 EAILQIPMQAF 232
LQ+P +A
Sbjct: 224 YFFLQVPARAI 234
>gi|329890925|ref|ZP_08269268.1| divergent polysaccharide deacetylase family protein [Brevundimonas
diminuta ATCC 11568]
gi|328846226|gb|EGF95790.1| divergent polysaccharide deacetylase family protein [Brevundimonas
diminuta ATCC 11568]
Length = 173
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A+ G E ++++PM+ N+ YTL + + +L + L R TGYFGV NY G
Sbjct: 2 ARAHGHEVMIELPMEPTGYPDNDPGPYTLLSSGGADDVAVKLDWLLARATGYFGVTNYLG 61
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGS---SPRNLTRVLAPKLNLPYMVADLYLDDQV 332
++ E + +RGL F DDGS P R AD +D++
Sbjct: 62 DRFATSDEGVSALMTNLRQRGLAFLDDGSMRRRPGAFARA----------SADRVVDEEQ 111
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
I + LE A+T G A+G ++ ++E ++W R + + P S + +
Sbjct: 112 TPAAILRQFNALEAAAKTNGAALGTGFSYPITVEAAARWTAGLEARGLQLAPASAMTR 169
>gi|254429372|ref|ZP_05043079.1| Divergent polysaccharide deacetylase superfamily [Alcanivorax sp.
DG881]
gi|196195541|gb|EDX90500.1| Divergent polysaccharide deacetylase superfamily [Alcanivorax sp.
DG881]
Length = 258
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 5/224 (2%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
RIAI++ LG S+ Q AI LPA +T A R + A G+E ++ +PM A
Sbjct: 26 RIAIIIDDLGYSRQHGQ-AIVDLPAPVTCAVIPFSPHARRLAERASLAGKEVLVHMPMAA 84
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + D L+ QLL+ +R +L + G+ N+ G+ L ++ + E
Sbjct: 85 --QRHQTLDQGGLRDGMDEPQLLDAVRQALSQIPQARGLNNHMGSALTEQQQPMGWLMTE 142
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
L F D +S ++ + +A ++ L + D++LD++ + I E+ L +AR
Sbjct: 143 LKAHQLFFVDSRTSSHSVAQQMARQVGLSHAGRDVFLDNERNLVSINEQFNRLIRLARQR 202
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
GQAI + + E++ + Q L + VVP+S L LS+P+
Sbjct: 203 GQAIAIGHPYPETVHYLQQVLPLMQDAGIEVVPVSTL--LSTPA 244
>gi|242279092|ref|YP_002991221.1| hypothetical protein Desal_1620 [Desulfovibrio salexigens DSM 2638]
gi|242121986|gb|ACS79682.1| protein of unknown function DUF610 YibQ [Desulfovibrio salexigens
DSM 2638]
Length = 418
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ + ++AIV+ +G + + L A IT + N + + + + AKK G E ++
Sbjct: 195 DPNAPKLAIVIDDMG-EDLKLAKGLAALDAKITFSIWPNSSHVKKTIAIAKKSGNEIMVH 253
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PMQ + L V ++ + ++ + G G+ N+ G+ N
Sbjct: 254 LPMQPKGYPKVNPGADALLVGMDADKISSITLAAIAKVPGATGLNNHMGSSFTENYNGML 313
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
K+ K+ L F D ++P++ R A K + + +++LD+ D I+ +L +
Sbjct: 314 AALKQLNKKHLFFLDSRTTPKSACRRAASKAGVTFYERNIFLDNVKDVGAIKYQLSKAAK 373
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
IAR +GQAI + E+++ I QW+ E+ + +VP+S L
Sbjct: 374 IARKSGQAIAIGHPNHETLKAIRQWV-AENKGKIRIVPVSSL 414
>gi|317153225|ref|YP_004121273.1| hypothetical protein Daes_1513 [Desulfovibrio aespoeensis Aspo-2]
gi|316943476|gb|ADU62527.1| protein of unknown function DUF610 YibQ [Desulfovibrio aespoeensis
Aspo-2]
Length = 413
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 10/223 (4%)
Query: 170 GARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
G +AIV+ +G + INL P +TLA N + ++ + G++ I+ P
Sbjct: 194 GPMLAIVIDDIGEDLHVLKGLINLNFP--VTLAVWPNASQSRESVRLIQASGRDLIIHFP 251
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ S L T + + + R+ S+ R GV N+ G+ ++
Sbjct: 252 MEPMGYPAYNPGSDALFTTMSEEAIRKRVADSVARIPEAIGVNNHMGSKFTAHTPGMTTA 311
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
EF +RGL F D +S R++ R +A + P+ D++LD+ D I +L+ E +A
Sbjct: 312 LSEFRQRGLFFLDSLTSARSVARSVARQTGTPFYQRDIFLDNVKDVSAITLQLRKAENVA 371
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVR---DVSVVPLSCL 388
G AI + + E++ + W H R ++ V+PLS L
Sbjct: 372 LKNGVAIAIGHPYPETLAALKSW----HARKNPNIRVLPLSLL 410
>gi|110835138|ref|YP_693997.1| hypothetical protein ABO_2277 [Alcanivorax borkumensis SK2]
gi|110648249|emb|CAL17725.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 259
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 11/234 (4%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA---FASNGNSLDRWMKEAKKKGQ 221
S + RIAI++ LG S+ Q I+L PA + A F+ +G R + A G+
Sbjct: 20 VSGLAAPRIAIIIDDLGYSRQQGQAIIDL-PAPVACAVIPFSPHGR---RLAERASLAGK 75
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
E ++ +PM + + + D L+ QLL +R +L + G+ N+ G+ L
Sbjct: 76 EVLVHMPMAT--QGHQKLDRGGLQNGMDEPQLLEAVRQALGQIPQARGLNNHMGSALTEQ 133
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
++ + E L F D +S + + +A ++ LP D++LD+ + I ++
Sbjct: 134 PQTMGWLMAELKAHQLFFVDSRTSSHTVAQQVAQQVGLPNARRDVFLDNNRNPVSINQQF 193
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
L +AR GQAI + + E++ + Q L + VVP+S L LS+P+
Sbjct: 194 NRLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSL--LSTPA 245
>gi|332703283|ref|ZP_08423371.1| protein of unknown function DUF610 YibQ [Desulfovibrio africanus
str. Walvis Bay]
gi|332553432|gb|EGJ50476.1| protein of unknown function DUF610 YibQ [Desulfovibrio africanus
str. Walvis Bay]
Length = 505
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFA---SNGNSLDRWMKEAKKKGQEAILQI 227
AR+AIV+ LG S + A NL I +AFA S NS R A+K E +L
Sbjct: 219 ARLAIVIDDLGES---VEFASNLSRLGIPVAFAIWPSASNS-QRIAALARKAHMEVLLHQ 274
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF----GVMNYRGAMLLSNKE 283
PM+ SY EDD + ++ + +R + +F G+ N+ G+ ++
Sbjct: 275 PME--PRSYPEDDPGKGAMFISMNEAA--IRAVIMENLAHFPMAVGLNNHMGSRFTEDRR 330
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
V+ E RGL + D +S +++ + K P + D++LD+ D D I +L+
Sbjct: 331 GMSVVMDELRSRGLFYLDSMTSAKSVGTSVGKKAGTPVLRRDVFLDNVADVDAIFLQLRK 390
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E +A G+A+ + + E+++ + W+ Q R V V LS L
Sbjct: 391 AENVALKHGKAVAIGHPYPETLQALRTWVAQRDTR-VEAVTLSSL 434
>gi|90020140|ref|YP_525967.1| hypothetical protein Sde_0491 [Saccharophagus degradans 2-40]
gi|89949740|gb|ABD79755.1| protein of unknown function DUF610, YibQ [Saccharophagus degradans
2-40]
Length = 382
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 23/281 (8%)
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
T N+P + +++ P IE ++AK V TE S + RI
Sbjct: 111 TAENEPAAAKAVEDEPAIE-----------VIAKPAVPVNITE--------QSTVTSPRI 151
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
AI++ +G + R + LP +T AF R + AK+ + +L PM +
Sbjct: 152 AIIIDDIGY-RFDEGRELIELPYPLTFAFIPFSPYGARLAELAKQLNKPVMLHAPMATLN 210
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
ES E +L T +L+ L L GV N+ G++ ++ES + + + A
Sbjct: 211 ESKWE---ASLNPTMARTELIASLDAMLADIPHVTGVNNHGGSLFTQSRESMQWLSEALA 267
Query: 294 KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQ 353
+R L F D ++ +++ + A ++N+P+ D++LD++ D I +L L IA G+
Sbjct: 268 ERELFFVDSRTTAQSVAKEEAQRVNIPFNERDVFLDNERDLPAIDSQLDKLVAIALKHGE 327
Query: 354 AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
A+ + + E+++ + L + V VV + L P
Sbjct: 328 AVAIGHPYPETLQALKARLPLLAAQGVEVVGIELLLNRHRP 368
>gi|331006625|ref|ZP_08329910.1| hypothetical protein IMCC1989_515 [gamma proteobacterium IMCC1989]
gi|330419564|gb|EGG93945.1| hypothetical protein IMCC1989_515 [gamma proteobacterium IMCC1989]
Length = 349
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ LG + +A+ L P IT A + + +EA+K +E +L PM
Sbjct: 111 VAIIIDDLGYNYEQGLKAMQL-PGAITYAIIPHSPKAQFFAQEAQKHNKEIMLHAPMSTI 169
Query: 233 DESYNEDDSYT-LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + T L +Q+LN+ SL G+ N+ G++L + + +
Sbjct: 170 NHKPLGKNGLTGLMEEADFKQVLNQSLLSL---PSVKGMNNHMGSLLTQKSQPMSWVMQS 226
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+R L F D +S +++ +A + +P + D++LD + + I ++ K L A+
Sbjct: 227 LKQRQLYFIDSRTSAQSVAWDIAQQYGIPSLKRDVFLDHEPNEAFIDKQFKLLISTAKHQ 286
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
G A+ +A E++ +S L + H +S+VP S LAK SP
Sbjct: 287 GYAVAIAHPHPETVAYLSLNLSRLHDAGISLVPASELAKRFSP 329
>gi|119475541|ref|ZP_01615894.1| hypothetical protein GP2143_17016 [marine gamma proteobacterium
HTCC2143]
gi|119451744|gb|EAW32977.1| hypothetical protein GP2143_17016 [marine gamma proteobacterium
HTCC2143]
Length = 282
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + A I ++V +G S QRAINL P I AF A ++ +E
Sbjct: 31 FGQEKTVANIVLIVDDMGNSLELGQRAINL-PGAINYAFLPYSPHRVSLANIAFRQRKEV 89
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L PM T ++Q QQ L L +L GV N+ G+++ ++
Sbjct: 90 MLHAPMSNLHSHPVGQGGLTPNMSQ--QQFLQTLNTNLNSVPHVRGVNNHMGSLMTQLRQ 147
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ ++ L F D ++P + + A KL +P + D++LD++ D I + +
Sbjct: 148 PMGWLMAALKQQNLYFVDSRTTPLTVAKSTATKLGVPSLRRDIFLDNERQHDAIAMQFER 207
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-------PLSC 387
L +A+ TG A+G+ E+++ + + L R + +V P++C
Sbjct: 208 LIALAKKTGIAVGIGHPHPETLKYLEKTLPTLEQRGIKLVLASQALKPVNC 258
>gi|298530220|ref|ZP_07017622.1| protein of unknown function DUF610 YibQ [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509594|gb|EFI33498.1| protein of unknown function DUF610 YibQ [Desulfonatronospira
thiodismutans ASO3-1]
Length = 440
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 216 AKKKGQEAILQIPMQAFDESYN---EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMN 272
A KK E +L +PM+ ++Y+ E L V T +++ +L +SL + G+ N
Sbjct: 247 ASKKDFEVMLHMPMEP--DTYHRGVEPGPGALFVDMTPREIRRQLVHSLEQVPQATGMNN 304
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ + E +V+F+E KR + F D ++P ++ R LA + L +M ++LD+
Sbjct: 305 HMGSAFTRHYEGMQVVFEELEKRDMFFLDSVTTPDSVARRLARETGLDFMQRHVFLDNVR 364
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQW 371
I +L+ E++A G A+ + + E++E + QW
Sbjct: 365 SIQAITYQLQKAEQLASRHGMAVAIGHPYPETLEALQQW 403
>gi|304320591|ref|YP_003854234.1| hypothetical protein PB2503_05087 [Parvularcula bermudensis
HTCC2503]
gi|303299493|gb|ADM09092.1| hypothetical protein PB2503_05087 [Parvularcula bermudensis
HTCC2503]
Length = 388
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A++VSGLG+ T RA+ LPA I ++F++ ++D + A G+EA L+IPM
Sbjct: 176 LAVMVSGLGLDPVTTDRALLALPAEIGVSFSAYARNVDARLSAALAAGREAALEIPMATR 235
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
S L + + RL + L R Y V N+ G + SN E+ +
Sbjct: 236 GLSEAVLGPAALSPDRAAEGNATRLDWVLSRAPAYPYVTNFEGDLFASNAEAMQAFLNAL 295
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ GL + DD + R LNLPY DL L + + + ++L+ + A +
Sbjct: 296 DRAGLGYLDDTGKGGAIARA----LNLPYGEVDLVL--EPNDPEAADRLRAVSRRALSAE 349
Query: 353 QAIGVAV-AFDESIEVISQWLQQEHVRDVSVVPLSC 387
+ + V V A D +++ + W+ +V +VP S
Sbjct: 350 RPLIVKVYASDGNLDAVMAWVDTLQSGEVGLVPPSA 385
>gi|297570178|ref|YP_003691522.1| protein of unknown function DUF610 YibQ [Desulfurivibrio
alkaliphilus AHT2]
gi|296926093|gb|ADH86903.1| protein of unknown function DUF610 YibQ [Desulfurivibrio
alkaliphilus AHT2]
Length = 359
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+A+++ +G S ++ + L +T +F + + + +G+ +L +P++A
Sbjct: 139 RLALIIDDMGYSPEIEEKMLGLD-LELTFSFIPFAPQRQQILNRTRAQGRAILLHLPLEA 197
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
D+ +N+ L + ++++ +L GV N+ G+ +++ + +V+ +
Sbjct: 198 LDDKWNKAPGL-LATGMSEEEIVTGFTAALNEIPMATGVSNHMGSRFTADRRAMQVLLAQ 256
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+ L F D ++P ++ +A +L +P++ D+++D + ++IR ++ L IA
Sbjct: 257 LPRYDLYFLDSLTTPDSVGAEIAAELGIPFLRRDIFIDHHREPEQIRTQIDRLLNIAEKR 316
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G A+G+ + E++ V+ Q + E R V +V L L K
Sbjct: 317 GWAVGLGHPYPETLRVL-QEKEGELNRRVRLVKLDQLVK 354
>gi|218782460|ref|YP_002433778.1| hypothetical protein Dalk_4632 [Desulfatibacillum alkenivorans
AK-01]
gi|218763844|gb|ACL06310.1| protein of unknown function DUF610 YibQ [Desulfatibacillum
alkenivorans AK-01]
Length = 359
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+AI++ +G G Q LP IT + + A KG++ +L +PM+
Sbjct: 140 RVAIIIDDMGYG-NGIQHKFLDLPYVITYSILPHSPDQIEIANLAHDKGRQVLLHLPMEP 198
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ TL + T +++ L+ L GV N+ G+ L + IF
Sbjct: 199 MQYPEVDPGPGTLLASMTTDTMMDILKEDLAAVPYIAGVNNHMGSRLTMESGALYPIFTV 258
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
K+GL F D ++ ++ R A LP+ D++LD + ++LK L +A+
Sbjct: 259 LKKQGLFFVDSRTTRHSVCRPSARLFQLPFAQRDVFLDHVRTEAFVEKQLKLLVSVAKKR 318
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
GQAIG+ + + +V++ L +V +VP S L ++
Sbjct: 319 GQAIGIGHPYKVTYKVLAARLPAVDA-EVRLVPASDLVRV 357
>gi|158522465|ref|YP_001530335.1| protein of unknown function DUF610 YibQ [Desulfococcus oleovorans
Hxd3]
gi|158511291|gb|ABW68258.1| protein of unknown function DUF610 YibQ [Desulfococcus oleovorans
Hxd3]
Length = 315
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 12/232 (5%)
Query: 166 SNASGAR--IAIVVSGLGISQTGTQRAINL-LPANIT-LAFASNGNSLDRWMKEAKKKGQ 221
++A AR +AI++ +G + R +NL +P + L + G + R A++KG
Sbjct: 87 AHAPSARPKVAIIIDDMGYDRALAGRFVNLGIPLTFSILPHSPRGREIART---ARQKGI 143
Query: 222 EAILQIPMQAFDE--SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
E +L +PM+ DE + N D L + +L+ R+ +L + GV N+ G+ +
Sbjct: 144 EIMLHLPMEP-DEYPAVNPGDGVLL-TSMGPDELIARMENNLNDISHVAGVNNHMGSKMT 201
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
++ +F K GL F D ++P + R A L +P+ D++LD+ D I
Sbjct: 202 ADSARMYQVFSVLKKHGLFFVDSRTTPESQCRPAARLLQVPFAERDVFLDNDSDVAAIEA 261
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
++ L +A+ G+A+ + A + + + L + V +VP S L L
Sbjct: 262 QIDRLIAVAKRNGKAVAIGHAHGSTCTALEKHLAAL-TQQVELVPASHLVCL 312
>gi|323697918|ref|ZP_08109830.1| protein of unknown function DUF610 YibQ [Desulfovibrio sp. ND132]
gi|323457850|gb|EGB13715.1| protein of unknown function DUF610 YibQ [Desulfovibrio
desulfuricans ND132]
Length = 410
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 2/222 (0%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A G ++ +V+ +G + + L +T A + + ++ K + ++
Sbjct: 188 EAKGPKLVVVIDDVG-EDYRVLKGLAGLDLPLTFAVWPHASHTRECVEWIAKTHHDLLIH 246
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PM+ + L V+ T Q+ R+ +L R GV N+ G+ ++K
Sbjct: 247 FPMEPMGYPQVKPGDDALFVSMTPDQVRQRVADNLARIPEAIGVNNHMGSRFTADKAGMA 306
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
V EF + GL F D +S +++ R A + +P+ D +LD+ D + I +L+ E
Sbjct: 307 VALTEFKRHGLFFLDSLTSGKSVGRATAKTVGIPFYERDTFLDNVKDVNAILLQLRKTER 366
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G+AI + + ++++ + W Q + V+ LS L
Sbjct: 367 VAQRQGRAIAIGHPYRQTLDALRAW-QDSRDPAIQVITLSKL 407
>gi|94264377|ref|ZP_01288168.1| Protein of unknown function DUF610, YibQ [delta proteobacterium
MLMS-1]
gi|93455206|gb|EAT05422.1| Protein of unknown function DUF610, YibQ [delta proteobacterium
MLMS-1]
Length = 359
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+A++V +G + T+ + +T +F + L ++ A+ + +E +L +P++A
Sbjct: 142 RLALIVDDMGY-RPATELQLLARDWELTFSFIPFADHLYEVLETARLQEREILLHLPLEA 200
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
DE +NE L + +L + GV N+ G+ ++ + E + +
Sbjct: 201 QDERWNEAPGMLLTAMDDAA-IATGFADALAQVPMAVGVNNHMGSRFTADARAMEALMAQ 259
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
A L F D ++ ++ A + +P++ DL+LD+ D KI LK L EIA
Sbjct: 260 VAHYDLFFLDSLTTANSVADQAAARHQVPFLKRDLFLDNDQDPGKIIANLKRLLEIAEER 319
Query: 352 GQAIGVAVAFDESIEVISQWLQQ--EHVRDVSVVPLSCL 388
G A+G+ + ++ + + + E VR +VPLS L
Sbjct: 320 GYAVGICHPYPATVTALQDFYPRLAEKVR---LVPLSVL 355
>gi|302338309|ref|YP_003803515.1| protein of unknown function DUF610 YibQ [Spirochaeta smaragdinae
DSM 11293]
gi|301635494|gb|ADK80921.1| protein of unknown function DUF610 YibQ [Spirochaeta smaragdinae
DSM 11293]
Length = 314
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAK 217
P + + S +AI++ +G S R + P IT A +KE
Sbjct: 80 PLPGQKVPAKPSRGELAIIIDDVGYS-LKELRPLLAFPGPITFAILPGVTYSKEALKEIL 138
Query: 218 KKGQEAILQIPMQAFDESYNEDDS-YTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+ G+EAIL PM+A + + YT T V++ L++ LR G G+ N+ G+
Sbjct: 139 QAGKEAILHQPMEAIGGNDPGPGAIYTWMDTAAVREQLDKNLKELR---GVKGINNHMGS 195
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ S+ EV+ ++ ++ L+F D ++ ++R +A +L++PY ++LD+ +R++
Sbjct: 196 KVTSDPRVMEVVLEDLKEKNLMFIDSRTTAETVSRGIAQRLHIPYQERSVFLDNTQEREE 255
Query: 337 IREKLKGLEEIARTTGQAI 355
I + + + A G+AI
Sbjct: 256 ILQAFQEGLQKAEKNGRAI 274
>gi|148259913|ref|YP_001234040.1| protein of unknown function DUF610, YibQ [Acidiphilium cryptum
JF-5]
gi|146401594|gb|ABQ30121.1| protein of unknown function DUF610, YibQ [Acidiphilium cryptum
JF-5]
Length = 327
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A+++ G+G ++ ++ AI LP ++LA G L + A+ G E ++ IPMQ
Sbjct: 107 VAVMMGGIGEARQASRDAIRSLPPAVSLALTPYGPHLRSVVAAARAAGHETLMGIPMQTD 166
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML----LSNKESAEVI 288
E + L+ ++ L L ++L R GY GV + G + L+ + +
Sbjct: 167 REPAITEGDEALRGSELDPVNLKHLDWALSRSAGYVGVTDEIGMSVDETYLTQLLNRHWL 226
Query: 289 FKEFAKRGLLFF--DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
K+ GLL GS P +P VAD+ + ++ D+ R LK L
Sbjct: 227 GKQLRPTGLLLVTASQGSG--------VPS-GVPGRVADVVIHPEMSVDEQRAALKRLAA 277
Query: 347 IARTTGQAIGV-AVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A +G A+GV + + I V++QW Q + +VP+S L
Sbjct: 278 TAVASGSALGVISSPTADDIAVLAQWCQGLKADGLVLVPVSAL 320
>gi|326403133|ref|YP_004283214.1| hypothetical protein ACMV_09850 [Acidiphilium multivorum AIU301]
gi|325049994|dbj|BAJ80332.1| hypothetical protein ACMV_09850 [Acidiphilium multivorum AIU301]
Length = 321
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A+++ G+G ++ ++ AI LP ++LA G L + A+ G E ++ IPMQ
Sbjct: 101 VAVMMGGIGEARQASRDAIRSLPPAVSLALTPYGPHLRSVVAAARAAGHETLMGIPMQTD 160
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML----LSNKESAEVI 288
E + L+ ++ L L ++L R GY GV + G + L+ + +
Sbjct: 161 REPAITEGDEALRGSELDPVNLKHLDWALSRSAGYVGVTDEIGMSVDETYLTQLLNRHWL 220
Query: 289 FKEFAKRGLLFF--DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
K+ GLL GS + +P VAD+ + ++ D+ R LK L
Sbjct: 221 GKQLRPTGLLLVTASQGSGVPS---------GVPGRVADVVIHPEMSVDEQRAALKRLAA 271
Query: 347 IARTTGQAIGV-AVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A +G A+GV + + I V++QW Q + +VP+S L
Sbjct: 272 TAVASGSALGVISSPTADDIAVLAQWCQGLKADGLVLVPVSAL 314
>gi|315635656|ref|ZP_07890919.1| divergent polysaccharide deacetylase superfamily protein
[Arcobacter butzleri JV22]
gi|315479953|gb|EFU70623.1| divergent polysaccharide deacetylase superfamily protein
[Arcobacter butzleri JV22]
Length = 359
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 119/244 (48%), Gaps = 23/244 (9%)
Query: 140 SKKELLAKNKVGRE------DTEVPAMDKNFCSNASGA-RIAIVVSGLGISQTGTQRAIN 192
+KKE ++G E + P + N +IAI++ + +S + + N
Sbjct: 107 NKKEYEQTTEIGEENIPLVEEKAAPIKKDTYVYNKKDKPKIAIIIDDV-VSDSQKSKISN 165
Query: 193 L-LPANITLAFASNGNSLDRWMKEAKKKGQEA---ILQIPMQAFDESYNEDDSYTLKVTQ 248
+ P IT+AF N+ K++ K Q ++ P+QA ++ ++ TLK+T
Sbjct: 166 IGYP--ITMAFLPPTNT----HKDSAKIAQNVPFYMIHFPLQA-SSAFKGEEINTLKITD 218
Query: 249 TVQQLLNRLRY--SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP 306
+ + + NR++ S Y N+ G++ N E+ + +FK K +F D +S
Sbjct: 219 SYETIENRVKQLRSWYPNAKYTN--NHTGSVFTENDEAMDKLFKALVKYNFIFVDSKTSA 276
Query: 307 RNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
+++ + A K NLPY+ +++LD++ + I+ +L E+A+ G A+ + +D +++
Sbjct: 277 KSVGQKYANKYNLPYISRNIFLDNEKSYEYIKSQLIKTVELAKKHGYAVAIGHPYDITLK 336
Query: 367 VISQ 370
V+ +
Sbjct: 337 VLKE 340
>gi|77919271|ref|YP_357086.1| hypothetical protein Pcar_1672 [Pelobacter carbinolicus DSM 2380]
gi|77545354|gb|ABA88916.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 395
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 171 ARIAIVVSGLGISQTGTQR--AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
ARIAIVV LG +R AI+L ++T+A + + A + G+E ++ +P
Sbjct: 176 ARIAIVVDDLGRDLRMLRRLLAIDL---DLTMAVMPEEPHTLQSAELAHRAGREVLVHMP 232
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ N L + Q ++ R+ G N+ G+ E +++
Sbjct: 233 MEPESYPRNNPGPGALLLGQDRLEIERRVTRMFENVPHAVGGNNHMGSRFTQYAEGLQIV 292
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
F+ K GL F D +SP ++ + A + +P + D++LD+ + D I +++ ++A
Sbjct: 293 FEVMKKNGLFFVDSRTSPGSVAFLEARRARIPAVSRDIFLDNSQNVDAIARQIREAVKMA 352
Query: 349 RTTGQAIGVAVAFDESIEVISQ---WLQQEHVRDVSVVPLSCLAK 390
R+ G+ + + + +++E + Q +L+Q+ DV VVP+S L +
Sbjct: 353 RSRGKVVAICHPYPQTVEALQQEAAFLRQQ---DVEVVPVSRLLR 394
>gi|157736497|ref|YP_001489180.1| hypothetical protein Abu_0236 [Arcobacter butzleri RM4018]
gi|157698351|gb|ABV66511.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 359
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 117/242 (48%), Gaps = 19/242 (7%)
Query: 140 SKKELLAKNKVGRE------DTEVPAMDKNFCSNASGA-RIAIVVSGLGISQTGTQRAIN 192
+KKE ++G E + P + N +IAI++ + +S + + N
Sbjct: 107 NKKEYEQTTEIGEENIPLVEEKAAPIKKDTYVYNKKDKPKIAIIIDDV-VSDSQKSKISN 165
Query: 193 L-LPANITLAFASNGNSLDRWMKEAKKKGQEA---ILQIPMQAFDESYNEDDSYTLKVTQ 248
+ P IT+AF N+ K++ K Q ++ P+QA ++ ++ TLK+T
Sbjct: 166 IGYP--ITMAFLPPTNT----HKDSAKIAQNVPFYMIHFPLQA-SSAFKGEEINTLKITD 218
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+ + + NR++ N+ G++ N E+ + +FK K +F D +S ++
Sbjct: 219 SYETIENRVKQLRNWYPNAKYTNNHTGSVFTENDEAMDKLFKALVKYNFIFVDSKTSAKS 278
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ + A K NLPY+ +++LD++ + I+ +L E+A+ G A+ + +D +++V+
Sbjct: 279 VGQKYANKYNLPYISRNIFLDNEKSYEYIKAQLIKTVELAKKHGYAVAIGHPYDITLKVL 338
Query: 369 SQ 370
+
Sbjct: 339 KE 340
>gi|95928784|ref|ZP_01311530.1| protein of unknown function DUF610, YibQ [Desulfuromonas
acetoxidans DSM 684]
gi|95135129|gb|EAT16782.1| protein of unknown function DUF610, YibQ [Desulfuromonas
acetoxidans DSM 684]
Length = 328
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 3/226 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++AI++ +GI++ A+ L +P + LA M A ++ E ++ IPM+
Sbjct: 94 KVAIIMDDIGINRAAALDALQLQMP--LALAIIPGEAHSTEIMNLAYQQHSEILIHIPME 151
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
N L V Q+ Q+ R+ + G N+ G+ + + +
Sbjct: 152 PVSYPKNNPGPLGLFVHQSDSQIKRRIDDIITALPYAIGGNNHMGSEFTQHADKLRPVLL 211
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ GL F D +S ++ A KL L + D++LD+ + I +L L +A
Sbjct: 212 ALKQSGLFFVDSLTSKDSVAYQQAQKLGLSCALRDVFLDNVRQVEPILFQLDRLVTLAHR 271
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AI + + ++IE + Q++ DV +VP+S L PSS
Sbjct: 272 HGSAIAICHPYPQTIEALQQFIADPQRFDVEIVPISQLVHPPVPSS 317
>gi|308272530|emb|CBX29134.1| hypothetical protein N47_J01150 [uncultured Desulfobacterium sp.]
Length = 301
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 2/221 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ +G ++ + L A T + + ++ A+KKG+E +L +PM+
Sbjct: 83 VAIIIDDIGYHPDLEKKYLEL-DAAFTFSVLPFSPYKNITIEAARKKGREIMLHLPMEPN 141
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ L + + QL++++ + GV N+ G+ + ++ IF
Sbjct: 142 EYPEISPGPGALLTSMSPDQLISQINEDIDDVPFIKGVNNHMGSKMSASDVQMNQIFSVL 201
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
RGL F D + P+ R A L + D+++D + DR+ I+ ++ L +IA G
Sbjct: 202 KARGLYFIDSKTGPKTYGRESARLFKLTFAERDVFIDHKQDREFIKNQIYELIKIANRHG 261
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+AI + + + +V+S+ L + +++VP S + K SS
Sbjct: 262 KAIAIMHPYPLTYQVVSEMLPYMK-KKMNIVPASAIVKDSS 301
>gi|256830630|ref|YP_003159358.1| hypothetical protein Dbac_2867 [Desulfomicrobium baculatum DSM
4028]
gi|256579806|gb|ACU90942.1| protein of unknown function DUF610 YibQ [Desulfomicrobium baculatum
DSM 4028]
Length = 433
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A R+ I++ LG S +R + LP ++ + + + A+++ E +L +
Sbjct: 214 AKAPRLVIIIDDLGESMAVAKR-LAALPFAVSFSVLPHNTKARQVSNLARQENLELLLHL 272
Query: 228 PMQ--AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
P + + ++ N TL+V T L L +L R GV N+ G+ L +K++
Sbjct: 273 PCEPEGYPKTANSGPG-TLRVNMTPADLEQTLADNLARLPDVDGVNNHMGSRLTQDKKAM 331
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
++ +G F D ++P++ R ++ L + Y ++LD+ + +LK E
Sbjct: 332 TIVLGHLQGQGKFFVDSLTTPKSCVRDVSNTLGMRYYRRHIFLDNTAKEHAVLLQLKKAE 391
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
+A+ TG A+ + + ++ + W + RD++VV
Sbjct: 392 SLAKRTGLAVAIGHPYPATLSALESWAKS---RDMNVV 426
>gi|89094931|ref|ZP_01167862.1| hypothetical protein MED92_00710 [Oceanospirillum sp. MED92]
gi|89080797|gb|EAR60038.1| hypothetical protein MED92_00710 [Oceanospirillum sp. MED92]
Length = 277
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ-- 230
+AIV+ +G ++ AI L P IT AF + K A G+E IL PM+
Sbjct: 30 MAIVIDDIGDNRKKGLAAIEL-PGAITYAFLPHTPHSFELAKTAHFLGKEVILHAPMENK 88
Query: 231 --------AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
A +N T ++ + L+ + Y++ G+ N+ G++L ++
Sbjct: 89 AGLRLGPGALTHRHN-----TAELQHILGDGLDSIPYAV-------GMNNHMGSLLTEDR 136
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E I + +R + F D ++ + + +A + +PY+V D++LD++ + I + K
Sbjct: 137 EKMRDIMRVVKQRNMFFLDSMTTSKTVAWKVAHEYGIPYLVRDVFLDNRQEWGYIHNQFK 196
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A T G A+ + + E++E +S+ L
Sbjct: 197 QAVSLAVTQGHAVVIGHPYPETVEYLSEAL 226
>gi|317128473|ref|YP_004094755.1| hypothetical protein Bcell_1761 [Bacillus cellulosilyticus DSM
2522]
gi|315473421|gb|ADU30024.1| protein of unknown function DUF610 YibQ [Bacillus cellulosilyticus
DSM 2522]
Length = 266
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
N S R AI++ G + G + +N +P IT+A + K A + G E I+
Sbjct: 27 NHSVYRAAIIIDDFGGNTGGVKEFMNADVP--ITMAIMPFLDESTEQAKRANELGFEVII 84
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+P++ + + ++ R+ ++ G+ N+ G+ ++ N+
Sbjct: 85 HMPLEPKKGKRSWLGPLPITADLETDEVKRRVEKAIENVPHAKGINNHMGSKIVGNERIV 144
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV-DRDKIREKLKGL 344
I + K GL D G+S ++ +A +LN+PY + D +LDD R+ + +++ L
Sbjct: 145 RAILEVAKKHGLYVIDSGTSGDSVVPEIAEELNIPYGIRDTFLDDSFSSRNHVYKQMIKL 204
Query: 345 EEIARTTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+I + GQAI V V +++ I L +++ +VP+S L
Sbjct: 205 CDIVKKHGQAIAIGHVGVKGNDTFNGIQDALPHLEEKNIQIVPMSHL 251
>gi|78223057|ref|YP_384804.1| hypothetical protein Gmet_1850 [Geobacter metallireducens GS-15]
gi|78194312|gb|ABB32079.1| protein of unknown function DUF610, YibQ [Geobacter metallireducens
GS-15]
Length = 320
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA--SNGNSLDRWMKEAKKKGQEAIL 225
A +AI++ +G G Q A +++ + + F+ + + +EA+++G EA++
Sbjct: 99 AGSGNLAIIIDDMG---KGMQEARSIIDIGVPVTFSIIPGLPKVRQVAQEAQRRGIEAMI 155
Query: 226 QIPMQ--AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+PM+ + E E++ L +Q+ +++ R+ + G N+ G+ NKE
Sbjct: 156 HLPMEPKGYPERRLEENGLLL--SQSNDEIVVRMNGYFKEVPQAVGANNHMGSAFTENKE 213
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
++ + ++GL F D +S ++ A ++ L ++LD+ D I ++++
Sbjct: 214 KMAIVLRVLKEKGLFFVDSKTSAISVGESTAREMGLRTASRSVFLDNIQDVGYISKQIRQ 273
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
IAR G AI + +I+ ++ L + V++VP S L
Sbjct: 274 AASIARKRGSAIAICHPHPATIQALAAELPKLRDEGVTLVPASSL 318
>gi|258542077|ref|YP_003187510.1| hypothetical protein APA01_09810 [Acetobacter pasteurianus IFO
3283-01]
gi|256633155|dbj|BAH99130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636212|dbj|BAI02181.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639267|dbj|BAI05229.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642321|dbj|BAI08276.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645376|dbj|BAI11324.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648431|dbj|BAI14372.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651484|dbj|BAI17418.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654475|dbj|BAI20402.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 363
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A+++ G+ + T AIN LP ++L + + + M A++ E +L +P+Q
Sbjct: 116 VALLIDGIDQTDDLTTEAINSLPGPVSLGISPYAANPEELMNAARQHRHETLLSLPIQDN 175
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY---RGAMLLSNKESAEVIF 289
+ L + + QQ ++ L ++L GY GV N + ES + +
Sbjct: 176 ATKNTDAGPKALGLLLSPQQNMDNLNWALSHLAGYVGVTNAFAGQNGGSFPQSESFKSLV 235
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
K +RGLL+ D ++P T + AD+ ++ D I +L L+++AR
Sbjct: 236 KAIDQRGLLYLD--ATPGTQTEGASST-----ATADVVVNTDTDIVNIDIQLLKLQQLAR 288
Query: 350 TTGQAIGVAVAFDE-SIEVISQWLQQEHVRD--VSVVPLS 386
G+AIG+ ++ + WL H++D +++VP+S
Sbjct: 289 QNGRAIGILGPLRPVAMACLRAWL--PHLKDMGIALVPVS 326
>gi|323141912|ref|ZP_08076773.1| divergent polysaccharide deacetylase [Phascolarctobacterium sp. YIT
12067]
gi|322413659|gb|EFY04517.1| divergent polysaccharide deacetylase [Phascolarctobacterium sp. YIT
12067]
Length = 423
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 171 ARIAIVVSGLGISQTGTQRAINL-LPANIT-LAFASNGNSLDRWMKEAKKKGQEAILQIP 228
++AIV+ G ++ +N LP + L + + + ++ K KG+ +L +P
Sbjct: 205 GKVAIVIDDCGYDMAPVRKLLNTGLPFSYAILPYKQYSSDV---LEMVKAKGRVPMLHLP 261
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ D S + + T++ + + L+ R +L G GV N++G+ ++K++ V+
Sbjct: 262 MEPIDRSAMSEGAATIRTDLSAAEKLSLTRRALNSLPGVMGVNNHQGSKATADKDTMRVV 321
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+E ++ L F D ++ ++ R +A +L++ D++LD+ D IR+++ +A
Sbjct: 322 LQELRRQKLFFVDSRTNSASVARNMAQQLDVSTARNDIFLDNSSDVQAIRQQIYKAFAMA 381
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G I + A + + + + ++ VP++ L
Sbjct: 382 EKNGSVIAICHARPNTAKCWEMYAAEFKRTGITFVPVTEL 421
>gi|163749815|ref|ZP_02157060.1| hypothetical protein KT99_01686 [Shewanella benthica KT99]
gi|161330329|gb|EDQ01308.1| hypothetical protein KT99_01686 [Shewanella benthica KT99]
Length = 256
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 29/241 (12%)
Query: 164 FC-------SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN---GNSLDRWM 213
FC S + A++AI++ +G Q+ A+ LP NITL+ + GNS+
Sbjct: 6 FCFALIFPGSYVNAAQVAIIIDDIGYRQS--DEAVLTLPDNITLSILPHTPLGNSVAHI- 62
Query: 214 KEAKKKGQEAILQIPMQAFDE------SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
A ++G E +L +PMQA + D S T + QT+ Q + ++
Sbjct: 63 --AHERGYEVMLHLPMQALNGKKLGPGGITNDMSET-DIKQTISQAFENIPFAK------ 113
Query: 268 FGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
G N+ G++L E + + + + L F D ++ A KL +P + ++
Sbjct: 114 -GANNHMGSLLTQLDEPMQWVMESLKQHHLYFVDSMTTRYTKAGSTADKLGIPQLKRQIF 172
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
LD+ V + ++ + L +A GQ + +A E+IE + L + +S+V S
Sbjct: 173 LDNDVSPAGLNQQFERLIALAHRQGQVVAIAHPHPETIEYLKLNLPRLQQEGISLVKTSE 232
Query: 388 L 388
L
Sbjct: 233 L 233
>gi|104779656|ref|YP_606154.1| hypothetical protein PSEEN0377 [Pseudomonas entomophila L48]
gi|95108643|emb|CAK13337.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 254
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A ++I++ LG S R + L P +T+A + + ++A K G+ IL +PM
Sbjct: 23 AYMSIIIDDLGQSDERDSRTLAL-PGPVTMAIMPDTPHATDFARQAHKAGRTVILHMPMD 81
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y +++L RL +L + G+ N+ G+ + + +E +
Sbjct: 82 P------ATGPYAWHPGTAIEELARRLDAALAKVPYAAGINNHMGSRMTAQREPMHWLMA 135
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + A + L ++ D++LDD + I +L+ ++AR
Sbjct: 136 ELQRRHLFFVDSRTSAATVAAAEAQAVGLAHVSRDVFLDDVRTVEAINGQLQQGIDLARK 195
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
G A+ + + ++++V+S+ + + + + +V L
Sbjct: 196 QGSAVLIGHPYPQTLDVLSREIPKLKAQGIELVSL 230
>gi|46205339|ref|ZP_00048666.2| COG2861: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 261 LRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP 320
+ R G+ GV+N GA L++ + + + K+ A RGL F DDG+ PR+ A K LP
Sbjct: 1 MSRFPGFVGVVNAMGAKLMNEASALDPVLKDLAARGLGFVDDGTVPRSQLAGAAAKAKLP 60
Query: 321 YMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDV 380
A+ +D D I +L LE +AR G + A +I+ +S+W + R V
Sbjct: 61 SARAESVIDAVARPDAIDAELTRLETLARQKGFVLASGSASPMTIDRLSRWSRDLETRGV 120
Query: 381 SVVPLSC 387
+VP+S
Sbjct: 121 RLVPVSV 127
>gi|149193944|ref|ZP_01871042.1| hypothetical protein CMTB2_02628 [Caminibacter mediatlanticus TB-2]
gi|149135897|gb|EDM24375.1| hypothetical protein CMTB2_02628 [Caminibacter mediatlanticus TB-2]
Length = 332
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
I +P IT +F N + AK ++ +P++A ++Y++ + T+ ++ T
Sbjct: 137 IKQIPYKITPSFFPPTNRHPNTIYLAKS-FSHYMVHLPLEA--KNYHKPEPNTITISSTY 193
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
Q++ NR+ Y + + N+ G+ S+KES + +FK F K L F D +S
Sbjct: 194 QEIYNRIVYLKKIFPKAKFMNNHTGSTFTSDKESMKKLFKVFKKENLGFVDSVTSANTKG 253
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
++ N+P+ +++LD+ D++ IR++L +A+ G AI A+ I +I+
Sbjct: 254 ELVDKIYNIPFYKRNIFLDNIQDKNYIRKQLLKAVMLAKKHGYAI--AIGHPHKITLITL 311
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
++ +++V VV + L K
Sbjct: 312 KNSKDILKNVDVVYIDELNK 331
>gi|302343200|ref|YP_003807729.1| hypothetical protein Deba_1768 [Desulfarculus baarsii DSM 2075]
gi|301639813|gb|ADK85135.1| protein of unknown function DUF610 YibQ [Desulfarculus baarsii DSM
2075]
Length = 360
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 200 LAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRY 259
L F+ +G + R AK +G++ +L +PM+ L V Q L +
Sbjct: 174 LPFSPHGRQVARM---AKARGRQVLLHLPMEPKSFPRLSPGPGALLVEADEQALARQTAA 230
Query: 260 SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNL 319
L GV N+ G+ + + + + +RGL F D +SPR+ +A +L L
Sbjct: 231 DLDFLPEAVGVNNHMGSRFTEDATALRPVMTQIGRRGLFFVDSLTSPRSAAYDVAGQLGL 290
Query: 320 PYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVR- 378
D++LD +VD IR +++GL +AR I + +I+ + + QE +R
Sbjct: 291 RRARRDMFLDHEVDEQAIRRQIEGLIHLARGGHPVIAIGHPHQATIKALRHY--QERLRQ 348
Query: 379 DVSVVPLSCL 388
+V + P+S L
Sbjct: 349 EVRLRPVSEL 358
>gi|56459342|ref|YP_154623.1| hypothetical protein IL0231 [Idiomarina loihiensis L2TR]
gi|56178352|gb|AAV81074.1| Conserved protein [Idiomarina loihiensis L2TR]
Length = 251
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++IAIV+ +G ++ + A LLP NI+ A + + ++ +L +
Sbjct: 18 AYASKIAIVIDDIGNNKNDLKAA--LLPGNISFAVLPYTPYARAFALRGHHQKKQILLHM 75
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+A + N + Q+ +L +L GV N+ G+ L +
Sbjct: 76 PMEAVEN--NRPGPGVVTADMNNAQIKLQLVDALDSIPYVTGVNNHMGSKLTQLHMPMQA 133
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + A R L F D +S ++ +A + + ++LD+QVD ++++ + L I
Sbjct: 134 VMETLASRKLFFIDSRTSEFSVAEQMAGEFGVRTSHRHVFLDNQVDEPYLQQQFEQLLSI 193
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
A+ GQAIG+ + E++ + + L Q + + +V +S L +++
Sbjct: 194 AKRQGQAIGIGHPYPETLSFLQKQLPQLQEQGIELVFVSELTTVAN 239
>gi|282600473|ref|ZP_05974435.2| YibQ protein [Providencia rustigianii DSM 4541]
gi|282565189|gb|EFB70724.1| YibQ protein [Providencia rustigianii DSM 4541]
Length = 364
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
CS AS A++AIV+ G + I +PA I++A N +A ++G++
Sbjct: 35 ICSQASAAKLAIVIDDFGY-RAKEDNQILAMPAAISIAILPNSPHGIEVATQAYQQGRDI 93
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+ + E D TL + + + + ++ ++ R G+ N+ G+ + S+
Sbjct: 94 LIHMPMKPLSKQPLEKD--TLTPSMSAEDVDRIIKNAISRVPHAKGMNNHMGSEMTSSLS 151
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ L F D + + A + +P ++++D+ ++ R +L
Sbjct: 152 GMRNVMRSLSQSNLFFLDSVTIGNTQAQNAAKEFGVPSTKRNIFIDNHQSEEETRAQLNK 211
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G A+ + ++ + +++ DV +VP+S L
Sbjct: 212 AISYARKHGSAVAIGHPHPSTVRALQKFIPLIPA-DVELVPVSTL 255
>gi|152994760|ref|YP_001339595.1| hypothetical protein Mmwyl1_0726 [Marinomonas sp. MWYL1]
gi|150835684|gb|ABR69660.1| protein of unknown function DUF610 YibQ [Marinomonas sp. MWYL1]
Length = 392
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 6/263 (2%)
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRA 190
IE + G K + L+K+ + VPA + RIAI++ LG ++ G +
Sbjct: 128 IESKPAGGFPKPDALSKSS---KKEVVPAKILAVDVHPKMPRIAILIDDLGYNRHGMDSS 184
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +LP + LA + A+K+ + +L PM+ E K+T+
Sbjct: 185 L-MLPVEVALAILPSTPFAMETALTAQKQKRITLLHAPMENQRELKLGPGGLYAKMTE-- 241
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+L L L G GV N+ G++L + +S + + + R L F D +SP+++
Sbjct: 242 HELKATLSKDLDGLPGIQGVNNHMGSLLTTKADSMKWVMETLKGRSLFFIDSLTSPKSVA 301
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
+ A + L + D++LD+ I ++ L ++AR G A+ + + E++ + +
Sbjct: 302 KKTAQEYGLETVSRDVFLDNIRTEQAIDKQFSRLLKLARLHGSALAIGHPYPETMAYLKK 361
Query: 371 WLQQEHVRDVSVVPLSCLAKLSS 393
L V +V LS L SS
Sbjct: 362 RLNHLEQDGVRLVRLSDLLTASS 384
>gi|189424978|ref|YP_001952155.1| hypothetical protein Glov_1919 [Geobacter lovleyi SZ]
gi|189421237|gb|ACD95635.1| protein of unknown function DUF610 YibQ [Geobacter lovleyi SZ]
Length = 334
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 5/223 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFAS-NGNSLDRWMKE-AKKKGQEAIL 225
A A +A++V +G S Q A +L + + FA G DR + A KG E +L
Sbjct: 111 AGRAELAVIVDDMGSS---LQEARSLAAIGLPINFAIIPGLRHDREVALFATGKGIEVLL 167
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQ + + L + Q+ ++L +R+R L G N+ G+ N +
Sbjct: 168 HMPMQPKEYPQRRLEPNGLLLDQSDEELRSRVRGYLELLPQAVGANNHMGSGFTENADKM 227
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
V+ + GL F D ++P+ +A ++ L D++LD++ + + IR +L
Sbjct: 228 RVVLNVLKEHGLFFVDSITTPKTTGLKVAAEIKLASARRDVFLDNEQNEEYIRGQLNQAV 287
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G+AI + ++ +++ L + + +S+V ++ L
Sbjct: 288 ARARKNGRAIAICHPHPVTVATLTKALPELQSKGISLVKVTRL 330
>gi|157377603|ref|YP_001476203.1| protein of unknown function DUF610, YibQ [Shewanella sediminis
HAW-EB3]
gi|157319977|gb|ABV39075.1| protein of unknown function DUF610, YibQ [Shewanella sediminis
HAW-EB3]
Length = 253
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++AI++ +G Q+ A+ LP +T + + K+A G E +L +
Sbjct: 17 AEASQVAIIIDDIGYRQS--DEAVLSLPNTVTFSVLPHTPLGSEVAKKAHNMGHEIMLHL 74
Query: 228 PMQAFDESY-------NEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
PMQA + N D LK T+++ + + Y+ G N+ G++L
Sbjct: 75 PMQALNGKTMGPGGLTNTMDEAELK--HTLEKAFDNIPYAK-------GANNHMGSLLTQ 125
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
E + + +R L F D ++ A +L +P + ++LD+ V + + E+
Sbjct: 126 LDEPMLWVMESLKQRELYFVDSMTTRFTKASNKAEQLGIPLLRRQVFLDNDVSQSALEER 185
Query: 341 LKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ L +A GQA+ +A + E+I+ + + L + + +V S L
Sbjct: 186 FEHLISLAHKQGQAVAIAHPYPETIKFLKRNLHRLDKAGIELVKTSSL 233
>gi|296274361|ref|YP_003656992.1| hypothetical protein Arnit_2837 [Arcobacter nitrofigilis DSM 7299]
gi|296098535|gb|ADG94485.1| protein of unknown function DUF610 YibQ [Arcobacter nitrofigilis
DSM 7299]
Length = 388
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
A++ P+QA S ++ TLKV + +++ R+ + N+ G++ S+K
Sbjct: 222 ALVHFPLQAGITSIKFEEQNTLKVGDSYEKIEKRVAQIRKWYPKIKYTNNHTGSVFTSDK 281
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
S E + K K F D ++ ++ R + + +PY+ +++LD+ D + I+ +LK
Sbjct: 282 TSMEYLIKALKKYNFQFIDSRTTSHSVVREVTKEFGMPYIARNIFLDNNKDFNYIQNQLK 341
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVI--SQWLQQEHVRDVSVVPLSCL 388
IA+ TG AI + + ++EV+ S++L ++D+ +V ++ L
Sbjct: 342 KAIRIAKKTGSAIAIGHPYPITMEVLKKSKYL----LKDLDLVYINKL 385
>gi|229016679|ref|ZP_04173614.1| hypothetical protein bcere0030_12500 [Bacillus cereus AH1273]
gi|228744615|gb|EEL94682.1| hypothetical protein bcere0030_12500 [Bacillus cereus AH1273]
Length = 256
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT R ++L P +T+A S + A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTDRMLSL-PIPLTIAVMPFLPSTKQDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIRGKKEWLGPKAITTDLSDEEINNRLEQAIQEIPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILSACKKHGLFYLDSKTNPNSVVPKIGKELGVPVIENQLFFDD 187
>gi|229102031|ref|ZP_04232744.1| hypothetical protein bcere0019_11960 [Bacillus cereus Rock3-28]
gi|228681418|gb|EEL35582.1| hypothetical protein bcere0019_11960 [Bacillus cereus Rock3-28]
Length = 256
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ L + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKALTTDLSDEEINNRLEQAIKEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILTACKKHGLFYLDSKTNPNSVVPQIGKELGVPIIENQLFFDD 187
>gi|229095918|ref|ZP_04226896.1| hypothetical protein bcere0020_11690 [Bacillus cereus Rock3-29]
gi|229114870|ref|ZP_04244283.1| hypothetical protein bcere0017_11670 [Bacillus cereus Rock1-3]
gi|228668562|gb|EEL23991.1| hypothetical protein bcere0017_11670 [Bacillus cereus Rock1-3]
gi|228687542|gb|EEL41442.1| hypothetical protein bcere0020_11690 [Bacillus cereus Rock3-29]
Length = 256
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ L + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKALTTDLSDEEINNRLEQAIKEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILTACKKHGLFYLDSKTNPNSVVPQIGKELGVPIIENQLFFDD 187
>gi|222055713|ref|YP_002538075.1| protein of unknown function DUF610 YibQ [Geobacter sp. FRC-32]
gi|221565002|gb|ACM20974.1| protein of unknown function DUF610 YibQ [Geobacter sp. FRC-32]
Length = 314
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFAS-NGNSLDRWMKE-AKKKGQEAILQIPM- 229
+AI++ +G S T+ A +LL N+ + FA G + R + E A +G E ++ IPM
Sbjct: 98 VAIIIDDMGRS---TREADSLLAINLPITFAIIPGYAKARAVAEIAHGRGGEVMVHIPME 154
Query: 230 -QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
Q + E E + L ++ +Q+ ++++ L+ G N+ G+ ++E + +
Sbjct: 155 PQGYPEKKMEKNGLLL--GESNEQIASKVKGYLQEIPYAVGANNHMGSRFTESEEKMQPV 212
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ ++GL F D +SP++ LA K+ L ++LD+ + I +L+ + + A
Sbjct: 213 LQILQEKGLFFVDSMTSPKSAGFRLARKMGLKSGTRQVFLDNVQNVQAINAQLQQVADAA 272
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
R G AI + +I+ +S + Q + ++ V
Sbjct: 273 RRRGSAIAICHPHRTTIQALSGMMPQLKKQGITFV 307
>gi|330987186|gb|EGH85289.1| yibQ gene product [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 260
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + L P +TLA + + +EA + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNPARDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMAWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAINRQLQSAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + + +++V+ + L +
Sbjct: 204 HGSAVVIGHPYPVTLDVLERELPK 227
>gi|167036099|ref|YP_001671330.1| hypothetical protein PputGB1_5110 [Pseudomonas putida GB-1]
gi|166862587|gb|ABZ00995.1| protein of unknown function DUF610 YibQ [Pseudomonas putida GB-1]
Length = 259
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
++I++ LG S R + L P +T+A + + ++A + G+ IL +PM
Sbjct: 30 LSIIIDDLGQSSERDNRTLAL-PGPVTMAIMPDTPHASDFARQAHRAGKTVILHMPMDPA 88
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y L +L +RL+ +L + G+ N+ G+ + + +E + E
Sbjct: 89 TGPYAWHPGAPLP------ELASRLQAALAKVPYAAGINNHMGSRMTAQREPMVWLMGEL 142
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R L F D +S + A ++ L ++ D++LDD + I +L+ +AR G
Sbjct: 143 QQRHLFFVDSRTSAATVAAAEAQRIGLAHVSRDVFLDDVRTPEAIAAQLQQGVALARKQG 202
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
A+ + + ++++V+ + + + ++PL
Sbjct: 203 SAVLIGHPYPQTLQVLESAMPGLKHQGIELIPL 235
>gi|71736710|ref|YP_277009.1| yibQ gene product [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483742|ref|ZP_05637783.1| yibQ gene product [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|71557263|gb|AAZ36474.1| yibQ gene product [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320326473|gb|EFW82525.1| YibQ [Pseudomonas syringae pv. glycinea str. B076]
gi|320331766|gb|EFW87704.1| YibQ [Pseudomonas syringae pv. glycinea str. race 4]
gi|330872598|gb|EGH06747.1| YibO protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|331012105|gb|EGH92161.1| YibO protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 260
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + LP +TLA + + +EA + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNPARDSRTL-ALPGPVTLAIMPDTPHATEFAREAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMAWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAINRQLQSAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + + +++V+ + L +
Sbjct: 204 HGSAVVIGHPYPVTLDVLERELPK 227
>gi|289649391|ref|ZP_06480734.1| yibQ gene product [Pseudomonas syringae pv. aesculi str. 2250]
Length = 260
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + L P +TLA + + +EA + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNPARDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMAWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAINRQLQSAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + + +++V+ + L +
Sbjct: 204 HGSAVVIGHPYPVTLDVLERELPK 227
>gi|167621981|ref|YP_001672275.1| hypothetical protein Shal_0040 [Shewanella halifaxensis HAW-EB4]
gi|167352003|gb|ABZ74616.1| protein of unknown function DUF610 YibQ [Shewanella halifaxensis
HAW-EB4]
Length = 230
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASN---GNSLDRWMKEAKKKGQEAILQIPM 229
+AI++ LG Q+ +A+ LPANITL+ + G SL R EA +G E ++ +PM
Sbjct: 1 MAIIIDDLGYRQS--DKAVLSLPANITLSILPHTPLGQSLAR---EAYLQGNEVLVHLPM 55
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
QA + + T +++T +L ++ S+ G N+ G++L +
Sbjct: 56 QALNGKAIGPGALTNTMSET--ELKTQIADSINSVPNASGANNHMGSLLTQLNSPMRWVM 113
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D ++ +A + +P + +++LD+ + ++ +A
Sbjct: 114 ESLQQHNLYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAGLEKQFNYAISLAH 173
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
T + +A + E+IE +++ L + ++ +VP S L
Sbjct: 174 TKRNIVVIAHPYPETIEFLNENLHRLQSSNIDLVPTSQL 212
>gi|114569952|ref|YP_756632.1| hypothetical protein Mmar10_1402 [Maricaulis maris MCS10]
gi|114340414|gb|ABI65694.1| protein of unknown function DUF610, YibQ [Maricaulis maris MCS10]
Length = 350
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+I +V+ +G+ +R + L P +T+A + A+ G + +L +PM+
Sbjct: 113 QIVLVIDDVGLDVAAAERVVAL-PIPLTVAILPYAEASAELAALARLNGHDVLLHMPMEP 171
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ L++ + L R+R+ + R G G+ N+ G+ ++ + V
Sbjct: 172 V--GLADPGPNALRIGLSDVDLQTRVRWGMARVPGAIGLNNHMGSRFTADPRALRVALSA 229
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+ LF D ++ + R +A L L + D++LD + I +L E+AR
Sbjct: 230 VSHTNPLFLDSLTTGESRGRAVAAGLGLRALERDIFLDHDRSAEAIEARLADAAELARQD 289
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G A+ + +++ ++ WL+ + + V LA
Sbjct: 290 GFAVVIGHPHTLTLDTLTAWLESPAAQGIDFVTAGTLA 327
>gi|229160384|ref|ZP_04288382.1| hypothetical protein bcere0009_11780 [Bacillus cereus R309803]
gi|228623108|gb|EEK79936.1| hypothetical protein bcere0009_11780 [Bacillus cereus R309803]
Length = 244
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 12 ANAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 70
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 71 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+I K GL + D ++P ++ + +L +P + L+ DD I ++ + L
Sbjct: 131 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLL- 189
Query: 346 EIARTTGQAIGVAVA 360
I + + I VA+
Sbjct: 190 -IKKIQEKPIMVAIG 203
>gi|302391080|ref|YP_003826900.1| hypothetical protein Acear_0286 [Acetohalobium arabaticum DSM 5501]
gi|302203157|gb|ADL11835.1| protein of unknown function DUF610 YibQ [Acetohalobium arabaticum
DSM 5501]
Length = 380
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINL-LPANIT-LAFASNGNSLDRWMKEAKKKGQEAILQIP 228
AR+A ++ LG ++ GT + + P + L F S ++A + G E +L +P
Sbjct: 163 ARMAFIIDDLGFNRDGTAELMEIDRPLTVAVLPFRPYSTSD---AEKAVQAGHEILLHLP 219
Query: 229 MQAFDE-SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
M+ S E YT + ++ + + SL G GV N+ G+ + ++ ++ V
Sbjct: 220 MEPSSPVSPGEGAIYTDMAPEEIRTTIQKGLASL--GVEVAGVNNHMGSKVTADNKTMSV 277
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ ++ L F D ++PR++ A ++ Y V L++D+ D+++I ++++ L ++
Sbjct: 278 VLDYLHQQDLFFIDSSTAPRSVVPAAAREVGESYAVNHLFIDNIDDKERINKQIQYLADV 337
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A G+ I + +I+ I + + + + + +V +S L K
Sbjct: 338 ALKQGELITIGHIKPNTIQAIKELIPKLEEKGIQLVYVSELVK 380
>gi|298484779|ref|ZP_07002879.1| Putative periplasmic protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160633|gb|EFI01654.1| Putative periplasmic protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 260
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + L P +TLA + + +EA + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNPARDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + + +++V+ + L +
Sbjct: 204 HGSAVVIGHPYPVTLDVLERELPK 227
>gi|83644204|ref|YP_432639.1| hypothetical protein HCH_01349 [Hahella chejuensis KCTC 2396]
gi|83632247|gb|ABC28214.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 286
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ-- 230
IAI++ +G Q +RAI + PA +TL+F + + A G+E +L IPM+
Sbjct: 39 IAIIIDDMGNYQNMGERAIRI-PAPLTLSFLPFRPHTNSQARLAYAAGKEIMLHIPMENV 97
Query: 231 ---AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
S D + + T +Q + + Y GV N+ G+ L N+ + +
Sbjct: 98 KRIPLGASGLTSDMSSQNMVATFRQAIKAIPY-------VSGVNNHMGSALTQNRAAMNL 150
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ E L F D ++ ++ +A +P + D++LD + I + K L +I
Sbjct: 151 VMGELQGYPLYFVDSRTTASSVAHAVAANHAIPTLNRDVFLDHVITTKAIDFQFKRLLDI 210
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G AI + E+IE + + L + V++ + L
Sbjct: 211 ARKKGTAIAIGHPHRETIEYLEKVLPSLGEQGVAIATIKGL 251
>gi|298505881|gb|ADI84604.1| divergent polysaccharide deacetylase domain protein [Geobacter
sulfurreducens KN400]
Length = 295
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFA--SNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+A+++ +G G A L+ I L FA + R +EA+++G E ++ +PM+
Sbjct: 79 LAVIIDDMG---KGLPEARALMDIGIPLTFAIIPGLPKVRRVAEEARQRGIEVMVHLPME 135
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
++ L ++Q ++ R+ L G N+ G+ N++ V+
Sbjct: 136 PKGYPERRLEANGLLLSQGDDEIAGRVNGYLNEIPQAVGANNHMGSGFTENRQKMAVVMG 195
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+RGL F D +SP ++ +A ++ + V +++LD+ + I +L+ IAR
Sbjct: 196 VLKERGLFFVDSKTSPVSVGDAVAREMGVRTAVRNVFLDNIQESGYITNQLRQAASIARK 255
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I+ ++ L + ++ V +S L +
Sbjct: 256 RGNAIAICHPHPATIQTLAVELPRLRDEGITFVTVSRLVR 295
>gi|39996868|ref|NP_952819.1| hypothetical protein GSU1769 [Geobacter sulfurreducens PCA]
gi|39983756|gb|AAR35146.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length = 290
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFA--SNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+A+++ +G G A L+ I L FA + R +EA+++G E ++ +PM+
Sbjct: 74 LAVIIDDMG---KGLPEARALMDIGIPLTFAIIPGLPKVRRVAEEARQRGIEVMVHLPME 130
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
++ L ++Q ++ R+ L G N+ G+ N++ V+
Sbjct: 131 PKGYPERRLEANGLLLSQGDDEIAGRVNGYLNEIPQAVGANNHMGSGFTENRQKMAVVMG 190
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+RGL F D +SP ++ +A ++ + V +++LD+ + I +L+ IAR
Sbjct: 191 VLKERGLFFVDSKTSPVSVGDAVAREMGVRTAVRNVFLDNIQESGYITNQLRQAASIARK 250
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I+ ++ L + ++ V +S L +
Sbjct: 251 RGNAIAICHPHPATIQTLAVELPRLRDEGITFVTVSRLVR 290
>gi|302187492|ref|ZP_07264165.1| hypothetical protein Psyrps6_14148 [Pseudomonas syringae pv.
syringae 642]
Length = 260
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + L P +TLA + + +EA + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNPQRDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G A+ + + +++V+ + L + V + L +
Sbjct: 204 YGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSM 241
>gi|229108888|ref|ZP_04238492.1| hypothetical protein bcere0018_11640 [Bacillus cereus Rock1-15]
gi|228674544|gb|EEL29784.1| hypothetical protein bcere0018_11640 [Bacillus cereus Rock1-15]
Length = 256
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKITADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+I K GL + D ++P ++ + +L +P + L+ DD I ++ + L
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLL- 201
Query: 346 EIARTTGQAIGVAVA 360
I + + I VA+
Sbjct: 202 -IKKIQEKPIMVAIG 215
>gi|229043173|ref|ZP_04190897.1| hypothetical protein bcere0027_12270 [Bacillus cereus AH676]
gi|228726180|gb|EEL77413.1| hypothetical protein bcere0027_12270 [Bacillus cereus AH676]
Length = 256
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAIMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+I K GL + D ++P ++ + +L +P + L+ DD I ++ + L
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLL- 201
Query: 346 EIARTTGQAIGVAVA 360
I + + I VA+
Sbjct: 202 -IKKIQEKPIMVAIG 215
>gi|303246510|ref|ZP_07332789.1| protein of unknown function DUF610 YibQ [Desulfovibrio
fructosovorans JJ]
gi|302492220|gb|EFL52095.1| protein of unknown function DUF610 YibQ [Desulfovibrio
fructosovorans JJ]
Length = 374
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 6/225 (2%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A G R+ +V+ +G + +R + L P +TLA N E G E IL
Sbjct: 151 TAKGPRMVVVIDDIGDNPVMARRLMEL-PFPVTLAILPNRPHTRSLAAEIAAHGNETILH 209
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ L +++ L ++ + G+ N+ G+ S++ +
Sbjct: 210 QPMQPISYPRVNPGPGALFTDMDTRRIQTTLSENIAQLPHIVGINNHMGSAFTSDQAGMD 269
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ GL F D +SP + A K + Y ++LD+ + I +LK E
Sbjct: 270 AVMPVLKAHGLFFMDSVTSPASAAAEAARKAGVHYYRRAVFLDNVRNVRTILGQLKTAER 329
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRD--VSVVPLSCLA 389
A G+AI + ++E+ E + W ++ RD VS+V L+ L
Sbjct: 330 HALKHGRAIAIGHPYNETYEALLLWAKE---RDPHVSLVTLTELG 371
>gi|163939239|ref|YP_001644123.1| protein of unknown function DUF610 YibQ [Bacillus
weihenstephanensis KBAB4]
gi|229010728|ref|ZP_04167925.1| hypothetical protein bmyco0001_11830 [Bacillus mycoides DSM 2048]
gi|229166266|ref|ZP_04294025.1| hypothetical protein bcere0007_12400 [Bacillus cereus AH621]
gi|163861436|gb|ABY42495.1| protein of unknown function DUF610 YibQ [Bacillus
weihenstephanensis KBAB4]
gi|228617211|gb|EEK74277.1| hypothetical protein bcere0007_12400 [Bacillus cereus AH621]
gi|228750402|gb|EEM00231.1| hypothetical protein bmyco0001_11830 [Bacillus mycoides DSM 2048]
Length = 256
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S + A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKQDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIRGKKEWLGPKAITTDLSDEEINNRLEQAIQEIPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+I K GL + D ++P ++ + +L +P + L+ DD I ++ + L
Sbjct: 143 RLILSACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTVSHISKQAQLL- 201
Query: 346 EIARTTGQAIGVAVA 360
I + + I VA+
Sbjct: 202 -IKKIQDKPIMVAIG 215
>gi|114321714|ref|YP_743397.1| protein of unknown function DUF610, YibQ [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228108|gb|ABI57907.1| protein of unknown function DUF610, YibQ [Alkalilimnicola ehrlichii
MLHE-1]
Length = 264
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+A+V+ LG QR ++L P +T + + R + + G+E +L +PMQA
Sbjct: 38 RVAVVIDDLGDHLASGQRTVDL-PGPVTCSVLPHTPHARRLAEACHRSGKEVMLHMPMQA 96
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + + + +T + +R L GV N+ G++ + + +
Sbjct: 97 KNGADRGPGGVDIHMDRTAVEAA--VRKDLDAVPHARGVNNHMGSLYTRHPGNLRWVMDA 154
Query: 292 FAKRGLLFF-DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
G +F D ++ R++ +A + +P ++LD D + IR L+ L AR
Sbjct: 155 LRGEGDYYFVDSRTTARSVAEQVAREAGVPATRRHVFLDHDRDPEMIRHHLERLVRHARR 214
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
G + + + E++ V+ + L + + +VP S L +L
Sbjct: 215 HGYGLAIGHPYPETLAVLEEVLPEWARAGIKLVPASRLVEL 255
>gi|228920144|ref|ZP_04083493.1| hypothetical protein bthur0011_11610 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839600|gb|EEM84892.1| hypothetical protein bthur0011_11610 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 256
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDD 187
>gi|330874211|gb|EGH08360.1| hypothetical protein PSYMP_06329 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 260
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ S A + +++ LG + R + L P +TLA + + +EA + G+
Sbjct: 23 DHAEKTSKAYLTLIIDDLGQNPARDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKT 81
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y L +L +RL +L + G+ N+ G+ + +
Sbjct: 82 VILHMPMDPATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEP 135
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R L F D +S + + A ++ L + D++LDD+ + I +L+
Sbjct: 136 VAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQ 195
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 196 TAIKLAQKQGSAVVIGHPYPVTLDVLERELPRLKAQGVEWIDLRSM 241
>gi|254282675|ref|ZP_04957643.1| Divergent polysaccharide deacetylase superfamily [gamma
proteobacterium NOR51-B]
gi|219678878|gb|EED35227.1| Divergent polysaccharide deacetylase superfamily [gamma
proteobacterium NOR51-B]
Length = 252
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
C+ S R+AI++ LG S A NL PA +TL+ + ++G+E +
Sbjct: 20 CNEVSHPRLAIIIDDLGYSLNRGLDAANL-PAPLTLSIIPHTPHAHSIATVGVEQGKEIM 78
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM++ D L + +L G GV N+ G+ L +N+
Sbjct: 79 VHMPMES--TKVPPSDPVVLTTALADDDFEATIDAALLSVPGATGVNNHMGSKLTTNRPL 136
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + F D ++ ++ +A + +P ++LD+ D +I +L
Sbjct: 137 MERFMARVLDNSMFFIDSRTTAESVAADVATAMAVPNTERSVFLDNTRDPVQIENQLLEA 196
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
IA G A+ + + E+++V++Q L + V +VP S L
Sbjct: 197 VSIALHAGDAVAIGHPYPETLKVLAQALPRLP-SAVQLVPASAL 239
>gi|229149633|ref|ZP_04277864.1| hypothetical protein bcere0011_11920 [Bacillus cereus m1550]
gi|228633843|gb|EEK90441.1| hypothetical protein bcere0011_11920 [Bacillus cereus m1550]
Length = 256
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDD 187
>gi|75759334|ref|ZP_00739431.1| Hypothetical exported protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218896364|ref|YP_002444775.1| hypothetical protein BCG9842_B3959 [Bacillus cereus G9842]
gi|228900013|ref|ZP_04064249.1| hypothetical protein bthur0014_12220 [Bacillus thuringiensis IBL
4222]
gi|74493166|gb|EAO56285.1| Hypothetical exported protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218540741|gb|ACK93135.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228859627|gb|EEN04051.1| hypothetical protein bthur0014_12220 [Bacillus thuringiensis IBL
4222]
Length = 256
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+I K GL + D ++P ++ + +L +P + L+ DD I ++ + L
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLL- 201
Query: 346 EIARTTGQAIGVAVA 360
I + + I VA+
Sbjct: 202 -IKKIQEKPIMVAIG 215
>gi|30019484|ref|NP_831115.1| hypothetical protein BC1334 [Bacillus cereus ATCC 14579]
gi|206967544|ref|ZP_03228500.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228907064|ref|ZP_04070928.1| hypothetical protein bthur0013_12370 [Bacillus thuringiensis IBL
200]
gi|228951813|ref|ZP_04113911.1| hypothetical protein bthur0006_12270 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228957703|ref|ZP_04119448.1| hypothetical protein bthur0005_12190 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229068983|ref|ZP_04202276.1| hypothetical protein bcere0025_11910 [Bacillus cereus F65185]
gi|229078617|ref|ZP_04211174.1| hypothetical protein bcere0023_12820 [Bacillus cereus Rock4-2]
gi|229126748|ref|ZP_04255760.1| hypothetical protein bcere0015_12050 [Bacillus cereus BDRD-Cer4]
gi|229144036|ref|ZP_04272452.1| hypothetical protein bcere0012_11990 [Bacillus cereus BDRD-ST24]
gi|229177839|ref|ZP_04305212.1| hypothetical protein bcere0005_12030 [Bacillus cereus 172560W]
gi|229189514|ref|ZP_04316530.1| hypothetical protein bcere0002_11930 [Bacillus cereus ATCC 10876]
gi|296502013|ref|YP_003663713.1| hypothetical protein BMB171_C1177 [Bacillus thuringiensis BMB171]
gi|29895028|gb|AAP08316.1| hypothetical Exported Protein [Bacillus cereus ATCC 14579]
gi|206736464|gb|EDZ53611.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228593959|gb|EEK51762.1| hypothetical protein bcere0002_11930 [Bacillus cereus ATCC 10876]
gi|228605630|gb|EEK63078.1| hypothetical protein bcere0005_12030 [Bacillus cereus 172560W]
gi|228639433|gb|EEK95847.1| hypothetical protein bcere0012_11990 [Bacillus cereus BDRD-ST24]
gi|228656688|gb|EEL12514.1| hypothetical protein bcere0015_12050 [Bacillus cereus BDRD-Cer4]
gi|228704687|gb|EEL57116.1| hypothetical protein bcere0023_12820 [Bacillus cereus Rock4-2]
gi|228714095|gb|EEL65977.1| hypothetical protein bcere0025_11910 [Bacillus cereus F65185]
gi|228801975|gb|EEM48847.1| hypothetical protein bthur0005_12190 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228807736|gb|EEM54257.1| hypothetical protein bthur0006_12270 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228852568|gb|EEM97358.1| hypothetical protein bthur0013_12370 [Bacillus thuringiensis IBL
200]
gi|296323065|gb|ADH05993.1| hypothetical protein BMB171_C1177 [Bacillus thuringiensis BMB171]
Length = 256
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+I K GL + D ++P ++ + +L +P + L+ DD I ++ + L
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQLL- 201
Query: 346 EIARTTGQAIGVAVA 360
I + + I VA+
Sbjct: 202 -IKKIQEKPIMVAIG 215
>gi|15600328|ref|NP_253822.1| hypothetical protein PA5135 [Pseudomonas aeruginosa PAO1]
gi|218894234|ref|YP_002443103.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa LESB58]
gi|254243986|ref|ZP_04937308.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296391985|ref|ZP_06881460.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa PAb1]
gi|313110177|ref|ZP_07796076.1| hypothetical protein PA39016_002260002 [Pseudomonas aeruginosa
39016]
gi|9951434|gb|AAG08520.1|AE004926_10 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126197364|gb|EAZ61427.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218774462|emb|CAW30279.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa LESB58]
gi|310882578|gb|EFQ41172.1| hypothetical protein PA39016_002260002 [Pseudomonas aeruginosa
39016]
Length = 257
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 103/216 (47%), Gaps = 7/216 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ +V+ LG + +R ++L P +TLA +EA ++G+ IL +PM
Sbjct: 33 LTVVIDDLGQNLARDRRVLDL-PPGVTLAIIPETPHAAELAREAHQRGRTVILHMPMDPA 91
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y ++ ++TQ ++ RL +L + G+ N+ G+ + + + + + +E
Sbjct: 92 GGPY----AWRPELTQ--EERARRLDAALAKVPFVQGLNNHEGSRMTAVRPAMAWLAEEL 145
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGL D +S + A ++ L + D++LD++ + + +L+ +AR G
Sbjct: 146 QRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQLQAGVALARKQG 205
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ + +++V+++ L + + + +VP L
Sbjct: 206 SALLIGHPHKATLDVLARELPKLRAQGIELVPPQML 241
>gi|107104231|ref|ZP_01368149.1| hypothetical protein PaerPA_01005304 [Pseudomonas aeruginosa PACS2]
gi|254238163|ref|ZP_04931486.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126170094|gb|EAZ55605.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 257
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 103/216 (47%), Gaps = 7/216 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ +V+ LG + +R ++L P +TLA +EA ++G+ IL +PM
Sbjct: 33 LTVVIDDLGQNLARDRRVLDL-PPGVTLAIIPETPHAAELAREAHQRGRTVILHMPMDPA 91
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y ++ ++TQ ++ RL +L + G+ N+ G+ + + + + + +E
Sbjct: 92 GGPY----AWRPELTQ--EERARRLDAALAKVPFVQGLNNHEGSRMTAVRPAMAWLAEEL 145
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGL D +S + A ++ L + D++LD++ + + +L+ +AR G
Sbjct: 146 QRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQLQAGVALARKQG 205
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ + +++V+++ L + + + +VP L
Sbjct: 206 SALLIGHPHKATLDVLARELPKLRAQGIELVPPQML 241
>gi|330967509|gb|EGH67769.1| hypothetical protein PSYAC_23214 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 260
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ S A + +++ LG + R + L P +TLA + + +EA + G+
Sbjct: 23 DHAEKPSKAYLTLIIDDLGQNPVRDSRTLAL-PGPVTLAIMPDTPHATDFAREAHRAGKT 81
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y L +L +RL +L + G+ N+ G+ + +
Sbjct: 82 VILHMPMDPATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEP 135
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R L F D +S + + A ++ L + D++LDD+ + I +L+
Sbjct: 136 VAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQ 195
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 196 TAIKLAQKQGSAVVIGHPYPVTLDVLERELPRLKAQSVEWIDLRSM 241
>gi|152985938|ref|YP_001351189.1| hypothetical protein PSPA7_5870 [Pseudomonas aeruginosa PA7]
gi|150961096|gb|ABR83121.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 258
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ +V+ LG + +R ++L P+ +TLA +EA ++G+ IL +PM
Sbjct: 34 LTVVIDDLGQNLARDRRVLDL-PSGVTLAIIPETPHAAELAREAHQRGRTVILHMPMDPA 92
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y ++ ++TQ ++ RL +L + G+ N+ G+ + + + + + +E
Sbjct: 93 GGPY----AWRPELTQ--EERARRLDAALAKVPFVQGLNNHEGSRMTAVRPAMAWLAEEL 146
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGL D +S + A ++ L + D++LD++ + + +L+ +AR G
Sbjct: 147 QRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQLQAGVALARRQG 206
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ + +++V+++ L + + + +VP L
Sbjct: 207 SALLIGHPHKATLDVLARELPKLRAQGIELVPPQML 242
>gi|229029103|ref|ZP_04185201.1| hypothetical protein bcere0028_12050 [Bacillus cereus AH1271]
gi|228732201|gb|EEL83085.1| hypothetical protein bcere0028_12050 [Bacillus cereus AH1271]
Length = 244
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 12 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 70
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 71 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 131 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 175
>gi|229183625|ref|ZP_04310848.1| hypothetical protein bcere0004_11970 [Bacillus cereus BGSC 6E1]
gi|228599868|gb|EEK57465.1| hypothetical protein bcere0004_11970 [Bacillus cereus BGSC 6E1]
Length = 244
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 12 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 70
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 71 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 131 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 175
>gi|331017072|gb|EGH97128.1| hypothetical protein PLA106_13587 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 260
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ S A + +++ LG + R + L P +TLA + + +EA + G+
Sbjct: 23 DHAEKTSKAYLTLIIDDLGQNPVRDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKT 81
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y L +L +RL +L + G+ N+ G+ + +
Sbjct: 82 VILHMPMDPATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEP 135
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R L F D +S + + A ++ L + D++LDD+ + I +L+
Sbjct: 136 VAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRICLASVSRDVFLDDERTAEAITRQLQ 195
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 196 TAIKLAQKHGSAVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSM 241
>gi|222095065|ref|YP_002529125.1| hypothetical protein BCQ_1405 [Bacillus cereus Q1]
gi|221239123|gb|ACM11833.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 256
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+PA + A ++AIV+ G + GT + ++L P +T+A S A
Sbjct: 15 LPAFLFPIETKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|28872442|ref|NP_795061.1| hypothetical protein PSPTO_5330 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213971178|ref|ZP_03399296.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301382306|ref|ZP_07230724.1| hypothetical protein PsyrptM_06718 [Pseudomonas syringae pv. tomato
Max13]
gi|302058523|ref|ZP_07250064.1| hypothetical protein PsyrptK_00941 [Pseudomonas syringae pv. tomato
K40]
gi|302132190|ref|ZP_07258180.1| hypothetical protein PsyrptN_12399 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28855697|gb|AAO58756.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213924047|gb|EEB57624.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 260
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ S A +++ LG + R + L P +TLA + + +EA + G+
Sbjct: 23 DHAEKTSKAYFTLIIDDLGQNPVRDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAGKT 81
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y L +L +RL +L + G+ N+ G+ + +
Sbjct: 82 VILHMPMDPATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEP 135
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R L F D +S + + A ++ L + D++LDD+ + I +L+
Sbjct: 136 VAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQ 195
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 196 TAIKLAQKHGSAVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSM 241
>gi|188025459|ref|ZP_02958730.2| hypothetical protein PROSTU_00480 [Providencia stuartii ATCC 25827]
gi|188023551|gb|EDU61591.1| hypothetical protein PROSTU_00480 [Providencia stuartii ATCC 25827]
Length = 303
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
AS A++AIV+ G +T I LP IT+A + +A ++G+E I+ +
Sbjct: 6 ASAAKLAIVIDDFGY-RTKEDNQILALPTPITIAILPDSPHGQLVANKAHQQGREVIIHM 64
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + E + TL T + +++ ++ ++ + G+ N+ G+ + S+
Sbjct: 65 PMKPLSKQPLEKN--TLSPTMSAEEIDRIIKRAISQVPYAKGMNNHMGSEMTSSLSGMRH 122
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +K F D + A + +P + ++LD+ ++ R +L
Sbjct: 123 VMNSLSKANFFFLDSVTIGNTQAVKAANEFGVPVVRRHIFLDNHQSEEETRVQLNKAVAY 182
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AR G AI + ++ + ++L Q D+ +V +S L + SS
Sbjct: 183 ARKHGNAIAIGHPHPSTVRALQKYLPQLPA-DIELVSVSALLQGSS 227
>gi|116053282|ref|YP_793605.1| hypothetical protein PA14_67820 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115588503|gb|ABJ14518.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 257
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 103/216 (47%), Gaps = 7/216 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ +V+ LG + +R ++L P +TLA +EA ++G+ IL +PM
Sbjct: 33 LTVVIDDLGQNLARDRRVLDL-PPGVTLAIIPETPHAAELAREAHQRGRTVILHMPMDPA 91
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y ++ ++TQ ++ RL +L + G+ N+ G+ + + + + + +E
Sbjct: 92 GGPY----AWRPELTQ--EERARRLDAALAKVPFVQGLNNHEGSRMTAVRPAMAWLAEEL 145
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+RGL D +S + A ++ L + D++LD++ + + +L+ +AR G
Sbjct: 146 QRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQLQAGIALARKQG 205
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ + +++V+++ L + + + +VP L
Sbjct: 206 SALLIGHPHKATLDVLARELPKLRAQGIELVPPQML 241
>gi|324325449|gb|ADY20709.1| divergent polysaccharide deacetylase [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 256
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPLKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|229120971|ref|ZP_04250213.1| hypothetical protein bcere0016_12800 [Bacillus cereus 95/8201]
gi|228662631|gb|EEL18229.1| hypothetical protein bcere0016_12800 [Bacillus cereus 95/8201]
Length = 256
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSIVPKIGKELGVPIIENQLFFDD 187
>gi|229154999|ref|ZP_04283113.1| hypothetical protein bcere0010_11930 [Bacillus cereus ATCC 4342]
gi|228628557|gb|EEK85270.1| hypothetical protein bcere0010_11930 [Bacillus cereus ATCC 4342]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTTDERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|229195628|ref|ZP_04322394.1| hypothetical protein bcere0001_11950 [Bacillus cereus m1293]
gi|228587877|gb|EEK45929.1| hypothetical protein bcere0001_11950 [Bacillus cereus m1293]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+PA + A ++AIV+ G + GT + ++L P +T+A S A
Sbjct: 15 LPAFLFPIEAKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|206977562|ref|ZP_03238456.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217958908|ref|YP_002337456.1| hypothetical protein BCAH187_A1488 [Bacillus cereus AH187]
gi|229138118|ref|ZP_04266716.1| hypothetical protein bcere0013_12420 [Bacillus cereus BDRD-ST26]
gi|206744280|gb|EDZ55693.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217063675|gb|ACJ77925.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645463|gb|EEL01697.1| hypothetical protein bcere0013_12420 [Bacillus cereus BDRD-ST26]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|42780521|ref|NP_977768.1| hypothetical protein BCE_1447 [Bacillus cereus ATCC 10987]
gi|42736441|gb|AAS40376.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|289624111|ref|ZP_06457065.1| yibQ gene product [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330868929|gb|EGH03638.1| YibO protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 260
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 93/204 (45%), Gaps = 7/204 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + L P +TLA + + +EA + + +L +PM
Sbjct: 31 AYLSLIIDDLGQNPARDSRTLAL-PGPVTLAIMPDTPHATEFAREAHRAAKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMAWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAINRQLQSAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + + +++V+ + L +
Sbjct: 204 HGSAVVIGHPYPVTLDVLERELPK 227
>gi|229172071|ref|ZP_04299636.1| hypothetical protein bcere0006_11850 [Bacillus cereus MM3]
gi|228611414|gb|EEK68671.1| hypothetical protein bcere0006_11850 [Bacillus cereus MM3]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|30261433|ref|NP_843810.1| hypothetical protein BA_1349 [Bacillus anthracis str. Ames]
gi|47777922|ref|YP_017970.2| hypothetical protein GBAA_1349 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184267|ref|YP_027519.1| hypothetical protein BAS1250 [Bacillus anthracis str. Sterne]
gi|52144005|ref|YP_082824.1| divergent polysaccharide deacetylase [Bacillus cereus E33L]
gi|65318702|ref|ZP_00391661.1| COG2861: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|118476904|ref|YP_894055.1| divergent polysaccharide deacetylase [Bacillus thuringiensis str.
Al Hakam]
gi|165870470|ref|ZP_02215125.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167639335|ref|ZP_02397607.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686852|ref|ZP_02878072.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706221|ref|ZP_02896682.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177651538|ref|ZP_02934327.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568129|ref|ZP_03021039.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196035274|ref|ZP_03102679.1| conserved hypothetical protein [Bacillus cereus W]
gi|196040679|ref|ZP_03107978.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196046501|ref|ZP_03113726.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218902539|ref|YP_002450373.1| hypothetical protein BCAH820_1422 [Bacillus cereus AH820]
gi|225863295|ref|YP_002748673.1| hypothetical protein BCA_1386 [Bacillus cereus 03BB102]
gi|227815821|ref|YP_002815830.1| hypothetical protein BAMEG_3245 [Bacillus anthracis str. CDC 684]
gi|228932713|ref|ZP_04095586.1| hypothetical protein bthur0009_11890 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945030|ref|ZP_04107391.1| hypothetical protein bthur0007_11960 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229090385|ref|ZP_04221628.1| hypothetical protein bcere0021_12140 [Bacillus cereus Rock3-42]
gi|229602452|ref|YP_002865845.1| hypothetical protein BAA_1418 [Bacillus anthracis str. A0248]
gi|254682505|ref|ZP_05146366.1| hypothetical protein BantC_01448 [Bacillus anthracis str.
CNEVA-9066]
gi|254726167|ref|ZP_05187949.1| hypothetical protein BantA1_27540 [Bacillus anthracis str. A1055]
gi|254733921|ref|ZP_05191635.1| hypothetical protein BantWNA_01941 [Bacillus anthracis str. Western
North America USA6153]
gi|254753779|ref|ZP_05205814.1| hypothetical protein BantV_14988 [Bacillus anthracis str. Vollum]
gi|254758876|ref|ZP_05210903.1| hypothetical protein BantA9_11259 [Bacillus anthracis str.
Australia 94]
gi|301052972|ref|YP_003791183.1| divergent polysaccharide deacetylase [Bacillus anthracis CI]
gi|30255287|gb|AAP25296.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47551627|gb|AAT30445.2| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178194|gb|AAT53570.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|51977474|gb|AAU19024.1| conserved hypothetical protein; possible divergent polysaccharide
deacetylase [Bacillus cereus E33L]
gi|118416129|gb|ABK84548.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|164713965|gb|EDR19487.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512774|gb|EDR88148.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170128755|gb|EDS97621.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669375|gb|EDT20118.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172082816|gb|EDT67879.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560863|gb|EDV14838.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195991951|gb|EDX55914.1| conserved hypothetical protein [Bacillus cereus W]
gi|196022685|gb|EDX61367.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196028469|gb|EDX67077.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218538662|gb|ACK91060.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786406|gb|ACO26623.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227004833|gb|ACP14576.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228692968|gb|EEL46686.1| hypothetical protein bcere0021_12140 [Bacillus cereus Rock3-42]
gi|228814699|gb|EEM60959.1| hypothetical protein bthur0007_11960 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826971|gb|EEM72732.1| hypothetical protein bthur0009_11890 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229266860|gb|ACQ48497.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|300375141|gb|ADK04045.1| conserved hypothetical divergent polysaccharide deacetylase
[Bacillus cereus biovar anthracis str. CI]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|49479759|ref|YP_035558.1| divergent polysaccharide deacetylase [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331315|gb|AAT61961.1| conserved hypothetical protein, possible divergent polysaccharide
deacetylase [Bacillus thuringiensis serovar konkukian
str. 97-27]
Length = 259
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPVKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|66048112|ref|YP_237953.1| hypothetical protein Psyr_4888 [Pseudomonas syringae pv. syringae
B728a]
gi|63258819|gb|AAY39915.1| Protein of unknown function DUF610 [Pseudomonas syringae pv.
syringae B728a]
gi|330970736|gb|EGH70802.1| hypothetical protein PSYAR_09607 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 260
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 99/220 (45%), Gaps = 7/220 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S A +++++ LG + R + L P +TLA + + ++A + G+ +L +P
Sbjct: 29 SKAYLSLIIDDLGQNPQRDSRTLAL-PGPVTLAIMPDTPHATEFARQAHRAGKTVMLHMP 87
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 88 MDPATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWL 141
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
E +R L F D +S + + A ++ L + D++LDD+ + I +L+ +IA
Sbjct: 142 MAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIA 201
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G A+ + + +++V+ + L + V + L +
Sbjct: 202 RKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSM 241
>gi|167634468|ref|ZP_02392789.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|254740389|ref|ZP_05198080.1| hypothetical protein BantKB_05133 [Bacillus anthracis str. Kruger
B]
gi|167530356|gb|EDR93082.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSAKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|253573367|ref|ZP_04850710.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846895|gb|EES74900.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 307
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++A+++ LG GT+ +NL P +T+A + + A + G + I+ +PM+
Sbjct: 69 KVAVIIDDLGNGMAGTEEILNL-PIKLTVAVMPFLETTQEDARRAHEYGHDVIIHMPMEP 127
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + T +++ R+ ++ + G+ N+ G+ + ++ VI +
Sbjct: 128 KQGKAEWLGPGAILSSMTDEEIRQRVEAAIDQVPYAIGMNNHMGSKVTEDERVMSVILEV 187
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+RGL F D ++ R++ L+ K+ LP + D++LDD + ++L+
Sbjct: 188 CRERGLFFIDSKTNSRSVVPRLSEKMGLPRLENDIFLDDVGSEAHVTKQLR 238
>gi|170719593|ref|YP_001747281.1| hypothetical protein PputW619_0406 [Pseudomonas putida W619]
gi|169757596|gb|ACA70912.1| protein of unknown function DUF610 YibQ [Pseudomonas putida W619]
Length = 259
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
++I++ LG S R + L P +T+A + + ++A K G+ IL +PM
Sbjct: 30 MSIIIDDLGQSTERDSRTLAL-PGPVTMAIMPDTPHASEFARQAHKAGKTVILHMPMDPA 88
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y L +L RL +L + G+ N+ G+ + + + + + E
Sbjct: 89 TGPYAWHPDIALP------ELARRLDAALAKVPYAAGINNHMGSRMTAQRGAMTWLMGEL 142
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R L F D +S + A L ++ D++LDD + I +L+ +AR G
Sbjct: 143 QRRHLFFVDSRTSAATVAAAEAQAQALGHVSRDVFLDDVRTTEAITTQLQQGVALARRQG 202
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
A+ + + ++++V+ Q + + + + +V L+
Sbjct: 203 SAVLIGHPYPQTLQVLEQEMPRLRSQGIELVTLT 236
>gi|228926462|ref|ZP_04089534.1| hypothetical protein bthur0010_11810 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228833286|gb|EEM78851.1| hypothetical protein bthur0010_11810 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 256
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVLKIGKELGVPIIENQLFFDD 187
>gi|228914003|ref|ZP_04077625.1| hypothetical protein bthur0012_12400 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845608|gb|EEM90637.1| hypothetical protein bthur0012_12400 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 AKAHTNKVAIVIDDFGNNMKGTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL ++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIHEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVLKIGKELGVPIIENQLFFDD 187
>gi|228938547|ref|ZP_04101155.1| hypothetical protein bthur0008_12120 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971426|ref|ZP_04132052.1| hypothetical protein bthur0003_12060 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978039|ref|ZP_04138418.1| hypothetical protein bthur0002_12430 [Bacillus thuringiensis Bt407]
gi|228781700|gb|EEM29899.1| hypothetical protein bthur0002_12430 [Bacillus thuringiensis Bt407]
gi|228788293|gb|EEM36246.1| hypothetical protein bthur0003_12060 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228821145|gb|EEM67162.1| hypothetical protein bthur0008_12120 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939056|gb|AEA14952.1| hypothetical protein CT43_CH1264 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ATAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDD 187
>gi|228964394|ref|ZP_04125508.1| hypothetical protein bthur0004_12430 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795251|gb|EEM42743.1| hypothetical protein bthur0004_12430 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 221
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+NA ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ANAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDD 187
>gi|94987564|ref|YP_595497.1| hypothetical protein LI1122 [Lawsonia intracellularis PHE/MN1-00]
gi|94731813|emb|CAJ55176.1| uncharacterized protein conserved in bacteria [Lawsonia
intracellularis PHE/MN1-00]
Length = 445
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 9/225 (4%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEA 223
C RI IV+ +G S + I L P ITL+ + + G E
Sbjct: 208 CPIDEKPRITIVIDDIGESIEAANQLIKLDFP--ITLSILPHTHYAKSIAMLTHSTGNEV 265
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ PM++ Y + + +++ N L ++ + G+ N+ G+ N++
Sbjct: 266 LIHQPMESIQSPYVSAGPGEIHTKMSAEEISNILCKNIEKIPYASGLNNHMGSCFTCNEK 325
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLK 342
+ K A +GL D + P + +A LP ++D I +LK
Sbjct: 326 GNHTVCKILASKGLFVLDSKTHPSSSFYNIAKGKGLPAYYRTHFIDHGHHTESSILNQLK 385
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVS--VVPL 385
E+ A GQAI + + E+I + +W+ +RD S +VPL
Sbjct: 386 KAEKYAIEKGQAIVIGHPYPETISALKKWIS---LRDTSIHIVPL 427
>gi|224368263|ref|YP_002602426.1| hypothetical protein HRM2_11500 [Desulfobacterium autotrophicum
HRM2]
gi|223690979|gb|ACN14262.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 349
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLA---FASNGNSLDRWMKEAKKKGQEAILQIP 228
R+AI++ +G + AI+ L +ITL+ +A + ++ + + +G E +L +P
Sbjct: 130 RVAIIIDDIGFDKK-ISLAISGLDPHITLSILPYAPHAKAIALLLHQ---RGTETLLHLP 185
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ + + L T T +LL++LR L GV N+ G+ + S I
Sbjct: 186 MEPMEYPKIDPGPGALLSTMTPDELLDQLRLDLDIIPFVAGVNNHMGSRMTSLSPQMNQI 245
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
F +R L F D ++ +L R A L +P+ D++LD+ D D I+++L L +A
Sbjct: 246 FTVLKQRNLFFIDSLTAKGSLCRQSARLLRIPFAQRDVFLDNVQDADYIKKQLAQLLAVA 305
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ G AIG+ + + + +++ + + +VP S L
Sbjct: 306 QRHGTAIGIGHPYRATYLTLKSEMERLK-KKIRIVPASAL 344
>gi|228996531|ref|ZP_04156170.1| hypothetical protein bmyco0003_11180 [Bacillus mycoides Rock3-17]
gi|229004182|ref|ZP_04161983.1| hypothetical protein bmyco0002_11470 [Bacillus mycoides Rock1-4]
gi|228757043|gb|EEM06287.1| hypothetical protein bmyco0002_11470 [Bacillus mycoides Rock1-4]
gi|228763163|gb|EEM12071.1| hypothetical protein bmyco0003_11180 [Bacillus mycoides Rock3-17]
Length = 255
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + A ++AIV+ G + GT+R ++L P +T+A S + A +KG E
Sbjct: 19 FQTYAHTNKVAIVIDDFGNNMKGTERMLSL-PIPLTVAVMPFLPSTKQDAVAAHQKGHEV 77
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
I+ +PM+ + + ++ +R+ +++ G+ N+ G+ + +++
Sbjct: 78 IIHMPMEPIKGKKEWLGPKAITTDLSDHEIESRVEQAIQEVPHAIGMNNHMGSKVTADER 137
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 138 IMRIILSVCKKHGLFYLDSKTNPNSIVPKIGKELGVPIVENQLFFDD 184
>gi|294143080|ref|YP_003559058.1| hypothetical protein SVI_4309 [Shewanella violacea DSS12]
gi|293329549|dbj|BAJ04280.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 256
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + A++AI++ +G + A+ LP NITL+ + A ++G E +
Sbjct: 14 SSYVNAAQVAIIIDDIGYRHS--DEAVLSLPDNITLSVLPHTPLGRSVAHTAHQRGYEVM 71
Query: 225 LQIPMQAFD-----ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
L +PMQA + +D + V + +QQ + ++ GV N+ G++L
Sbjct: 72 LHLPMQALNGKKLGPGGITNDMSEIDVKRIIQQDFESIPFAK-------GVNNHMGSLLT 124
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
E + + ++ + F D ++ + A KL +P + ++LD+ + + +
Sbjct: 125 QLDEPMRWVMESLKQKQVYFVDSMTTRFSKAGSTAEKLGIPQLKRQIFLDNDLSPAALNQ 184
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + L +A GQ + +A + E+IE + L + VS+V S L
Sbjct: 185 QFERLIALAHRQGQVVAIAHPYPETIEYLKLNLPRLQQAGVSLVKTSDL 233
>gi|322835022|ref|YP_004215049.1| hypothetical protein Rahaq_4336 [Rahnella sp. Y9602]
gi|321170223|gb|ADW75922.1| protein of unknown function DUF610 YibQ [Rahnella sp. Y9602]
Length = 309
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A+++I++ G Q + + + P +++A N M +A ++G+E
Sbjct: 17 FACQVQAAKLSILIDDFGYRQHEENQVLQM-PKAVSVAIFPNAPDSQMMMNKAHQQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYT-----LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
++ +PM + E D+ T +V + V Q + + Y++ G+ N+ G+ +
Sbjct: 76 LIHLPMAPLSKQPLEKDTLTPSMSAAEVKRIVDQAIINIPYAI-------GINNHMGSAM 128
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
S+ E + + L F D + + A + + +++LDD + +IR
Sbjct: 129 TSSLTGMENVMQAMNAHNLFFLDSMTIGNTQSVKAAQGTRVKVIKRNVFLDDVQNEAEIR 188
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+ + ++AR G AI + +++V+ Q L
Sbjct: 189 RQFERAIQLARKNGYAIAIGHPHPTTVKVLQQML 222
>gi|258514447|ref|YP_003190669.1| hypothetical protein Dtox_1161 [Desulfotomaculum acetoxidans DSM
771]
gi|257778152|gb|ACV62046.1| protein of unknown function DUF610 YibQ [Desulfotomaculum
acetoxidans DSM 771]
Length = 293
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA---K 217
D++ A++AIV+ G Q+ + + +L N L FA N L+ +K+A K
Sbjct: 61 DQSASKKVKKAQVAIVIDDFG--QSNREGVMEMLSINRPLTFAVMPN-LENSVKDAAMAK 117
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
+KG E I+ +PMQ + V+Q+ R+ + G N+ G++
Sbjct: 118 EKGFEIIVHLPMQPISGKSRWMGPGGITFDMGVEQIRQRVLQDFDQVPFAVGFNNHMGSL 177
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
+ S ++ I + ++G D ++ + ++ L +P D++LD+ + + +
Sbjct: 178 ITSKEKLMSPILEVAKEKGFFVLDSRTTEDSKVVSISKSLGIPCAKRDVFLDEVKNYEHM 237
Query: 338 REKLKGLEEIARTTGQAIGVA 358
+++LK L IA T G AIG+
Sbjct: 238 KKQLKVLSTIALTKGTAIGIG 258
>gi|192359430|ref|YP_001984003.1| Divergent polysaccharide deacetylase family [Cellvibrio japonicus
Ueda107]
gi|190685595|gb|ACE83273.1| Divergent polysaccharide deacetylase family [Cellvibrio japonicus
Ueda107]
Length = 290
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 9/229 (3%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLA---FASNGNSLDRWMKEAKKKGQEAILQ 226
++AI++ +G + +RA +L + TLA F +G L + A ++G+E +L
Sbjct: 34 AGQLAIIIDDIGYNLDAGRRAADL-SGDYTLAVLPFTPHGREL---AERAYRRGKEIMLH 89
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PM +E + L+ + + L L +L GV N+ G+ L +E
Sbjct: 90 APMS--NEQHLPLGKGGLESGMSRETFLQVLERNLADIPHVRGVNNHTGSQLTQEEEPMR 147
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E +RGL F D ++ + + +A LP D++LDD+ + + +L+
Sbjct: 148 WLMAELKQRGLYFVDSRTTAKTRAQAMAEAAGLPNRKRDVFLDDRPEPAHVASQLELAMA 207
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
AR G A+ + + ++ + + +++V S L S PS
Sbjct: 208 TARRQGSAVAIGHPYPSTLAALEKIAPLLEKYAITLVKASLLMPSSRPS 256
>gi|228990430|ref|ZP_04150395.1| hypothetical protein bpmyx0001_11920 [Bacillus pseudomycoides DSM
12442]
gi|228768956|gb|EEM17554.1| hypothetical protein bpmyx0001_11920 [Bacillus pseudomycoides DSM
12442]
Length = 255
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + A ++AIV+ G + GT+R ++L P +T+A S + A +KG E
Sbjct: 19 FQTYAHTNKVAIVIDDFGNNMKGTERMLSL-PIPLTVAVMPFLPSTKQDAVAAHQKGHEV 77
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
I+ +PM+ + + ++ +R+ +++ G+ N+ G+ + +++
Sbjct: 78 IIHMPMEPIKGKKEWLGPKAITTDLSDHEIESRVEQAIQEVPHAIGMNNHMGSKVTADER 137
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 138 IMRIILSVCKKHGLFYLDSKTNPNSVVPKIGKELGVPIVENQLFFDD 184
>gi|77359329|ref|YP_338904.1| hypothetical protein PSHAa0363 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874240|emb|CAI85461.1| conserved protein of unknown function ; putative signal peptide
[Pseudoalteromonas haloplanktis TAC125]
Length = 246
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 164 FCS-NASGARIAIVVSGLGISQTGTQRAINLL--PANITLAFASNGNSLDRWMKEAKKKG 220
F S NA +IAIV+ +G Q R + LL P ++ + + + A K
Sbjct: 13 FASLNAKAKQIAIVIDDIGYHQ----RDLELLTLPGQVSYSILPHTPYAQAFATLASKTN 68
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVT-QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
+E +L IPMQA + + TL + + +QQ+L SL + G V N+ G+ L
Sbjct: 69 KELLLHIPMQALNGKELGPGALTLNMNKEQIQQILGTALASLPQVKG---VNNHMGSALT 125
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
++ I + KR L F D ++ + + A L + + ++LD+ ++++
Sbjct: 126 QQSQAMRWIMEVLKKRHLYFLDSRTTELSQAQNAANFLGVENIGRHIFLDNITTPEQLQL 185
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+L L++ A AI +A + E+I + L Q + +VP+S L +
Sbjct: 186 RLDELKQHATEHKFAIAIAHPYPETIAFLRHVLPQLSKQGFELVPVSKLVE 236
>gi|218235875|ref|YP_002366115.1| hypothetical protein BCB4264_A1385 [Bacillus cereus B4264]
gi|218163832|gb|ACK63824.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 256
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++AIV+ G + GT + ++L P +T+A S A KKG E I+
Sbjct: 24 ATAHTNKVAIVIDDFGNNMKGTNQMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVII 82
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 83 HMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIV 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 143 RLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDD 187
>gi|326796766|ref|YP_004314586.1| hypothetical protein Marme_3537 [Marinomonas mediterranea MMB-1]
gi|326547530|gb|ADZ92750.1| protein of unknown function DUF610 YibQ [Marinomonas mediterranea
MMB-1]
Length = 344
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
RI+I++ LG ++ G + ++NL P + LA + + ++ ++ + +L PM+
Sbjct: 128 RISIIIDDLGYNRRGMESSLNL-PVEVALAILPHTPFGKKTALKSIEQNRVTLLHAPME- 185
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
++ + L + ++ + LR L G GV N+ G++L ++ ++ + +
Sbjct: 186 -NQRELKLGPGGLYASMGEEEFKSVLRDDLASLPGIKGVNNHMGSLLTTDSQAMNWVMQV 244
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
R L F D +S ++ +A + ++ D++LD+ KI ++ L ++A
Sbjct: 245 IGDRSLFFVDSVTSADSVAYTMALRHSINTTKRDVFLDNIRSEKKIEQQFLKLIQLAHQN 304
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G AI + + E++ +S+ L V +VP+ L
Sbjct: 305 GHAIAIGHPYPETMAYLSKRLADLSKLSVRLVPIDEL 341
>gi|291327262|ref|ZP_06127547.2| polysaccharide deacetylase family protein [Providencia rettgeri DSM
1131]
gi|291311023|gb|EFE51476.1| polysaccharide deacetylase family protein [Providencia rettgeri DSM
1131]
Length = 338
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
C S A++AIV+ G + + L PA +T+A + ++A ++G++
Sbjct: 2 MCLPVSAAKLAIVIDDFGYRVKEDNQILALSPA-VTIAILPSSPHGREVAEKAHQQGRDI 60
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+ + E D TL + + +++ ++ ++ R G+ N+ G+ + SN
Sbjct: 61 LIHMPMKPLSKQPLEKD--TLVPSMSAEEIDRIIKNAITRVPYAKGMNNHMGSEMTSNLV 118
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + +K L F D + A + +P + +++D+ ++ R +L
Sbjct: 119 GMRNVMQSLSKSNLFFLDSVTIGNTQAGNAAKEYGVPSLRRHIFIDNHQSEEETRTQLNK 178
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G A+ + ++ + ++L Q DV +V +S L
Sbjct: 179 AVAYARKHGSAVAIGHPHPSTVRALQKYLAQLPA-DVELVAVSAL 222
>gi|26991735|ref|NP_747160.1| hypothetical protein PP_5059 [Pseudomonas putida KT2440]
gi|148550134|ref|YP_001270236.1| hypothetical protein Pput_4932 [Pseudomonas putida F1]
gi|24986840|gb|AAN70624.1|AE016705_4 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148514192|gb|ABQ81052.1| protein of unknown function DUF610, YibQ [Pseudomonas putida F1]
Length = 255
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+ A+ A ++I++ LG S R + L P +T+A + + ++A K G+ I
Sbjct: 18 AAPANKAYMSIIIDDLGQSPERDSRTLAL-PGPVTMAIMPDTPHATDFARQAHKAGKTVI 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM Y +++L RL +L + G+ N+ G+ + + +E
Sbjct: 77 LHMPMDP------ATGPYAWHPGIAIEELARRLDAALVKVPYAAGINNHMGSRMTAQREP 130
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ E +R L F D +S + A ++ ++ D++LDD + I +L+
Sbjct: 131 MAWLMGELQRRHLFFVDSRTSAATVAAAEAQAHDVAHVSRDVFLDDVRTPEAIDAQLQQG 190
Query: 345 EEIARTTGQAIGVAVAFDESIEVI 368
+AR G A+ + + +++ V+
Sbjct: 191 IALARKQGSAVLIGHPYPQTLAVL 214
>gi|254788252|ref|YP_003075681.1| polysaccharide deacetylase family protein [Teredinibacter turnerae
T7901]
gi|237685753|gb|ACR13017.1| polysaccharide deacetylase family protein [Teredinibacter turnerae
T7901]
Length = 275
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 6/222 (2%)
Query: 168 ASGARIAIVVSGLGISQT-GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A+ +AI++ LG + GT+ I LP +T A + A G+E ++
Sbjct: 41 ANAPEVAIIIDDLGYKRKLGTE--ILALPWPLTAAIIPFTPYATTLAESAHVAGKEVMVH 98
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PM+ E L ++Q + R L G+ N+ G+ L ++ +
Sbjct: 99 APMEPVAPRPWEQG---LAISQDETEFRERCGAMLDAVPYAVGLNNHGGSRLTASSDHMH 155
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E + F D +S ++ +A + L +++LD+ D + I +L LE
Sbjct: 156 WLMAELDAKRFYFIDSRTSADSIAEDIAQTMGLATASRNVFLDNTRDPEAILAQLGKLET 215
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
IAR G AIG+ + E+++ + L R +++VP+S L
Sbjct: 216 IARQHGYAIGIGHPYPETLQALQLGLGAMANRGITLVPVSRL 257
>gi|330891664|gb|EGH24325.1| YibO protein [Pseudomonas syringae pv. mori str. 301020]
Length = 260
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A + +++ LG + R + LP +TLA + + +EA + G+ +L +PM
Sbjct: 31 AYLNLIIDDLGQNPARDSRTL-ALPGPVTLAIMPDTPHATEFAREAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMAWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E + L F D +S + + A ++ L + D++LDD+ + I +L+ +IAR
Sbjct: 144 ELQRCHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAINRQLQSAIKIARK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + + +++V+ + L +
Sbjct: 204 HGSAVVIGHPYPVTLDVLERELPK 227
>gi|332994651|gb|AEF04706.1| hypothetical protein ambt_15995 [Alteromonas sp. SN2]
Length = 280
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 163 NFCSNASGA-------RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
+F S+A+ + R+ I++ LG ++ A LP+ +T + ++
Sbjct: 17 SFTSHAAASATIPVKPRVIIILDDLGYRKS--DMAAFALPSEVTFSILPRTPLAQTISRK 74
Query: 216 AKKKGQEAILQIPMQ-----AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
A+++G+ +L +PMQ A D Y +T T LR +L+ GV
Sbjct: 75 AEQQGRAVMLHMPMQSTSGKAMGPLGLSTDMYPAAITHT-------LRAALKSVPNAVGV 127
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
N+ G+ + + + I +E ++GL F D +S + +A ++ +P ++LD+
Sbjct: 128 NNHMGSAFTVEEPAMQTIMEEIKRQGLFFVDSRTSVNTTAQQVADRVGVPNASRQVFLDN 187
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+ ++ + + +A+ G + +A + E+I ++ L
Sbjct: 188 DRSEASLSKQFEYTKRLAKRNGTVVVIAHPYPETITFLAHTL 229
>gi|330720619|gb|EGG98878.1| putative divergent polysaccharide deacetylase [gamma
proteobacterium IMCC2047]
Length = 305
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 11/228 (4%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANIT---LAFASNGNSLDRWMKEAKKKGQEAI 224
+S +I I++ LG + QRAI L P +T L F G L K+A ++ +E +
Sbjct: 24 SSSPQITIIIDDLGNNLRNGQRAIAL-PGAVTYSVLPFTPFGKQL---AKQAHQQDKEVM 79
Query: 225 LQIPMQAFDESYNED-DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
L +PM D S+ L Q +L ++ G+ N+ G+ L ++ E
Sbjct: 80 LHMPM---DNSHGHPLGPGGLTFKQDRPLFEQQLAAAITATPFVSGINNHMGSGLTTSSE 136
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D +S ++ A L +P + D++LD + I ++ K
Sbjct: 137 RMQWLMQSLKNYPLYFVDSRTSANSVAGRTALALKIPTLKRDIFLDHETTPAFIDKQFKR 196
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
L + A + G A+ + + +++ + + L Q V +VP S L L
Sbjct: 197 LLKKAHSKGHAVAIGHPYPSTLDYLEKALPQLDKLGVELVPPSQLLAL 244
>gi|87120387|ref|ZP_01076282.1| hypothetical protein MED121_09348 [Marinomonas sp. MED121]
gi|86164490|gb|EAQ65760.1| hypothetical protein MED121_09348 [Marinomonas sp. MED121]
Length = 433
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ N I I++ LG ++ G + +++L P + LA + + + A ++ +
Sbjct: 208 QELVENDDRPSITIIIDDLGYNRRGMEESLDL-PVEVALAILPHTPFSKKTARAATEQAR 266
Query: 222 EAILQIPMQAFDES-------YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+L +PM+ E Y + D LK T L+ + G G+ N+
Sbjct: 267 TILLHVPMENERELKLGPGGLYKKMDEAELKKT---------LQEGIESVPGITGINNHM 317
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G++L + ES + + + L F D +SP ++ A +L D++LD+ +
Sbjct: 318 GSLLTQDVESMQWVMEVIQPLELFFVDSLTSPNSVALSKALSFDLTTTRRDVFLDNIQEE 377
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
I ++ K L IAR G+A+ + + ++ +++ L Q V ++ L+
Sbjct: 378 KAIDKQFKRLLAIARKRGKALAIGHPYPATMNYLAKHLSQLEDEGVQLISLA 429
>gi|119505488|ref|ZP_01627560.1| hypothetical protein MGP2080_04180 [marine gamma proteobacterium
HTCC2080]
gi|119458597|gb|EAW39700.1| hypothetical protein MGP2080_04180 [marine gamma proteobacterium
HTCC2080]
Length = 255
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
C + +A+++ LG + Q A + PA +T++ K+G+E +
Sbjct: 19 CPLHNHGNLAVIIDDLGYNLDTAQVAAAI-PAPLTMSIIPGTPYALEVADLGAKRGKEVM 77
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM A + D L V + R++ +L+ G G+ N+ G+ L +N+E+
Sbjct: 78 LHMPMAAVRTRVS--DPLVLDGQLPVADIGQRVQQALQSVPGAAGMNNHMGSALTTNREA 135
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + E A + + F D ++ + R A +P ++LD++ + + ++K
Sbjct: 136 MDALMSELAAQDMFFIDSRTTAETVARDAAKARGVPSASRTVFLDNKPELAAVEIQIKEA 195
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A G AI + ++ +S+ L + DV+VV S +A+
Sbjct: 196 VRRALVEGYAIAIGHPHPATLTALSRALPRLPA-DVTVVSASQIAR 240
>gi|304398998|ref|ZP_07380867.1| protein of unknown function DUF610 YibQ [Pantoea sp. aB]
gi|304353458|gb|EFM17836.1| protein of unknown function DUF610 YibQ [Pantoea sp. aB]
Length = 300
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
FCS A +++IV+ +G + + + P I++A N +A + G E
Sbjct: 16 FCSAAQAGKLSIVIDDVGYRPAEENKVLQM-PQAISVAVLPNAPHAREMAIKAHQGGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D+ T +++ +++ +R ++ G+ N+ G+ + S+
Sbjct: 75 LIHLPMAPLSKQPLEKDTLTPEMSS--EEVARIMRNAVNNVPYAVGLNNHMGSRMTSSLP 132
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD D + IR++
Sbjct: 133 GMQKVMQALNHYNLYFLDSMTIANSQAIPAAQGTQVKVLKRRVFLDDSQDINAIRQQFSR 192
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
++A+ G AI + ++ V+ Q L
Sbjct: 193 AVKLAQRDGYAIAIGHPHPNTVRVLQQML 221
>gi|90414915|ref|ZP_01222879.1| hypothetical protein P3TCK_22160 [Photobacterium profundum 3TCK]
gi|90323971|gb|EAS40567.1| hypothetical protein P3TCK_22160 [Photobacterium profundum 3TCK]
Length = 241
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
A++AI++ LG ++ LP +T++ N +AKK+ +E +L +PM
Sbjct: 23 AAQLAIIIDDLGYQ--AMPELLSKLPPEVTISILPNTPYDLTVAAQAKKQHRETLLHMPM 80
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL T + Q L + LR +L R + N+ G+ L N ++ I
Sbjct: 81 E--PEHLAPLEVNTLTSTMSQQTLQHTLRQALTRVPDAIAINNHMGSALSQNIQAMGWIM 138
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
E + L + D ++ +++ + A ++ + ++LD ++ + ++L + A+
Sbjct: 139 AELKQHNLYYLDSRTTAKSIAQQQATSHSVLSLRRHVFLDHYQTKEFVTKQLTSAIKRAK 198
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
T G AI + ++ +++ L ++++V LS L
Sbjct: 199 TYGYAIAIGHPHPITLSTLNELLPNLTEEEITLVRLSTL 237
>gi|218888242|ref|YP_002437563.1| hypothetical protein DvMF_3159 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759196|gb|ACL10095.1| protein of unknown function DUF610 YibQ [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 543
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 2/215 (0%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
GAR+AIV+ +G S + R + L +T + + A K +E ++ +P
Sbjct: 324 GGARLAIVIDDIGESMSAA-RDLAALDYPVTFSVWPRSTHAREAAELAHKARREVMIHLP 382
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ + + Q Q++ +R ++RR G+ N+ G+ N + +
Sbjct: 383 MEPVRYPQVKPGPGAILSGQQPQEMAALVRDAVRRVPYAVGLNNHMGSRATQNAAAMRTV 442
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ G+ D + P + A + LP +++LD D+ I +L IA
Sbjct: 443 CEALDGTGMFVLDSMTHPASKLYFEAKRAGLPAYKRNVFLDVIADKRNIMFQLDKAARIA 502
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
+ GQAI + E++ + +W + R V++V
Sbjct: 503 QAEGQAIAIGHPLPETVAALKEWARTRD-RTVTIV 536
>gi|217971260|ref|YP_002356011.1| hypothetical protein Sbal223_0044 [Shewanella baltica OS223]
gi|217496395|gb|ACK44588.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS223]
Length = 251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 14/229 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +
Sbjct: 14 ISQSHAAQIALIIDDIGYRHT--DQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIM 71
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQ-----TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
L +PMQA + T +T+ +V +N + ++ G N+ G++L
Sbjct: 72 LHLPMQALNGKALGLGGLTNTMTEAQIRASVVDAINSVPFA-------KGANNHMGSLLT 124
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
E + + ++ L F D ++ A +L +P + L+LD+ +
Sbjct: 125 QLDEPMLWVMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDTSTKALER 184
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + A T G + +A + E++ + LQ+ + +VP S L
Sbjct: 185 QFNLMISQAHTQGSLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSL 233
>gi|315648451|ref|ZP_07901550.1| divergent polysaccharide deacetylase [Paenibacillus vortex V453]
gi|315276145|gb|EFU39491.1| divergent polysaccharide deacetylase [Paenibacillus vortex V453]
Length = 295
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++A+++ G Q GTQ ++L P IT+A + + + A K G + I+ +PM+
Sbjct: 62 SKLAVIIDDFGNGQKGTQEMLSL-PVKITVAVMPFLPTSKKDAESAHKMGHDVIIHMPME 120
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ + + T +++ R+ ++ G+ N+ G+ + ++ ++
Sbjct: 121 PKQGRASWLGPGAILSSLTDEEIRKRMEEAIDSVPYAIGINNHMGSKVTGDERIMSIVLD 180
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA-- 348
+RGL F D ++ R++ LA + +P + D++LDD + ++L + A
Sbjct: 181 VCKERGLFFMDSKTNYRSVVGKLAAEKGMPAIANDIFLDDVHTVQHVSKQLVTAAQHAEE 240
Query: 349 RTTGQAIGVAVAF 361
RT+ AIG F
Sbjct: 241 RTSCIAIGHVGVF 253
>gi|308068509|ref|YP_003870114.1| hypothetical protein PPE_01740 [Paenibacillus polymyxa E681]
gi|305857788|gb|ADM69576.1| Polysacc_deac_2 domain containing protein [Paenibacillus polymyxa
E681]
Length = 311
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A+++ LG + GT++ +NL P IT+A + + EA K+G + I+ +PM+
Sbjct: 73 VAVIIDDLGNNMKGTEQILNL-PVKITVAVMPFLPTTKQDAMEAHKRGHDVIVHLPMEPK 131
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+K T +++ ++ +++ G+ N+ G+ + S+K ++
Sbjct: 132 QGKPEWLGPGAIKANMTDEEVRAKVTAAIKDVPYAIGMNNHMGSKVTSDKRIMSIVLDVC 191
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+ GL F D ++ ++ LA K +P + D++LDD
Sbjct: 192 KEHGLFFVDSRTNYWSVVPELAAKKGMPPVRNDVFLDD 229
>gi|134299434|ref|YP_001112930.1| hypothetical protein Dred_1577 [Desulfotomaculum reducens MI-1]
gi|134052134|gb|ABO50105.1| protein of unknown function DUF610, YibQ [Desulfotomaculum reducens
MI-1]
Length = 271
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIV+ G + T L IT+A N + +EA K+G E IL PM
Sbjct: 43 LAIVIDDFGGADTHGVAQFMELKQPITVAVMPNLVNSKEHSEEAHKRGHEVILHQPM--- 99
Query: 233 DESYNEDDSY----TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
E + DS+ +K + +++ +L G N+ G+ + SNK+ +
Sbjct: 100 -EPLHGKDSWLGPGAIKSDMSYEEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPM 158
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ +GL D +S ++ +A + +P++ D++LD+ + I LK IA
Sbjct: 159 LEVAKDKGLFVLDSRTSDKSQVIKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIA 218
Query: 349 RTTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ G AI V + + E + + L V +VPLS + KL S
Sbjct: 219 KKQGYAISIGHVGPGGNVTAEAVKEALPLIEKEGVKLVPLSQVVKLKS 266
>gi|126176516|ref|YP_001052665.1| hypothetical protein Sbal_4335 [Shewanella baltica OS155]
gi|125999721|gb|ABN63796.1| protein of unknown function DUF610, YibQ [Shewanella baltica OS155]
Length = 251
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 14/229 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + A+IA+++ +G T +A+ LP+ +TL+ + + KKG E +
Sbjct: 14 ISQSHAAQIALIIDDIGYRHT--DQAVLALPSTVTLSVLPHTPLGEELANAGHKKGHEIM 71
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQ-----TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
L +PMQA + T +T+ +V +N + ++ G N+ G++L
Sbjct: 72 LHLPMQALNGKALGLGGLTNTMTEAQIRASVVDAINSVPFA-------KGANNHMGSLLT 124
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+ I + ++ L F D ++ A +L +P + L+LD+ +
Sbjct: 125 QLDDPMLWIMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDTSAKALER 184
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + A T G + +A + E++ + LQ+ + +VP S L
Sbjct: 185 QFNLMISQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSL 233
>gi|260892757|ref|YP_003238854.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
gi|260864898|gb|ACX52004.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
Length = 476
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 171 ARIAIVVSGL-GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
AR+AIV+ G S+ R L +T A N +EA K G E ++ +PM
Sbjct: 232 ARVAIVIDDFAGPSEKKGTREFLSLNKPLTFAVLPNYPLSAPTAREAVKAGFEVLVHLPM 291
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + + V +++ R+ ++ G G+ N+ G+ ++ +
Sbjct: 292 EPLKGDPSWLGPGAIYVHLNDEEIERRVERAIASVPGAVGMNNHMGSRATADPRVIRAVL 351
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D ++ +++ +A +L +PY L+LD D I+E+L+ L ++A
Sbjct: 352 RVAKRHNLFFLDSKTTNKSVIPQIAKELGVPYAEDGLFLDAVNDVGHIKEQLRKLAQLAL 411
Query: 350 TTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AI V V ++ I + L + + +V +S L L P+S
Sbjct: 412 KNGSAIAIGHVGVTGPNTVRAIKEMLPEFERLGIELVYVSTL--LKHPAS 459
>gi|54307443|ref|YP_128463.1| hypothetical protein PBPRA0222 [Photobacterium profundum SS9]
gi|46911863|emb|CAG18661.1| hypothetical protein PBPRA0222 [Photobacterium profundum SS9]
Length = 271
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+N A++AIV+ LG ++ LP +T++ N +AKK+ +E +
Sbjct: 48 STNIHAAQLAIVIDDLGYQ--AMPELLSNLPPEVTISILPNTPFDLAVAAQAKKQHRETL 105
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM+ + E ++ T ++Q Q L + LR +L R + N+ G+ L + ++
Sbjct: 106 LHMPMEPEHLAPLEVNTLTSAMSQ--QTLQHTLRQALTRVPNAIAINNHMGSALSQDTQA 163
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
I E + L + D ++ +++ + A ++ + ++LD ++ + ++L
Sbjct: 164 MGWIMAELKQHNLYYLDSRTTAKSIAQQQATSHHVLSLRRHVFLDHYQTKEFVTKQLMSA 223
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ A+ G AI + ++ +++ L D+++V LS L
Sbjct: 224 IKRAKQYGYAIAIGHPHPVTLSTLNELLPNLTEEDITLVRLSTL 267
>gi|127514737|ref|YP_001095934.1| protein of unknown function DUF610, YibQ [Shewanella loihica PV-4]
gi|126640032|gb|ABO25675.1| protein of unknown function DUF610, YibQ [Shewanella loihica PV-4]
Length = 251
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
A+++I++ +G QT A+ LP++ITL+ + +R A KG E +L +PM
Sbjct: 18 AAQVSIIIDDIGYRQT--DEAVLALPSDITLSVLPHTPLGERLAAIAHDKGHEIMLHLPM 75
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF-GVMNYRGAMLLSNKESAEVI 288
QA + T Q +Q L R + Y GV N+ G++L +
Sbjct: 76 QALNGKEMGPGGLT---NQMSEQALKRAVDDAFKSVPYAKGVNNHMGSLLTQLDAPMTWL 132
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ ++ F D ++ + A +L +P + L+LD+ V + + L ++A
Sbjct: 133 MESLKQQDNYFVDSMTTRYSKASDAANRLGIPLLRRQLFLDNDVSPQGLERQFNQLIQLA 192
Query: 349 RTTGQAIGVAVAFDESIEVI 368
GQ I +A + E+I +
Sbjct: 193 NKEGQLIVIAHPYPETISFL 212
>gi|227354766|ref|ZP_03839183.1| protein of hypothetical function DUF610, YibQ [Proteus mirabilis
ATCC 29906]
gi|227165084|gb|EEI49915.1| protein of hypothetical function DUF610, YibQ [Proteus mirabilis
ATCC 29906]
Length = 304
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + A A++AIV+ G + + + L P +++A N +A +G+E
Sbjct: 7 FSAPAFSAKLAIVIDDFGYRKKEDNQILQL-PTAVSIAILPNSPHGKEMATKAHAQGREI 65
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQT-----VQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
++ +PM + E D+ + Q +Q +NR+ Y++ G+ N+ G+ +
Sbjct: 66 LIHMPMAPISKQPLEKDTLKPSMDQAEINRIIQNAINRVPYAV-------GMNNHMGSAM 118
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
S++++ + + K L F D + A +P + ++LD+ + R
Sbjct: 119 TSDRQAMDRVIKALNHSDLYFLDSVTIGNTQAATAAKAAGVPSLRRHVFLDNVQTEAETR 178
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
++L +AR G AI + ++ + Q L
Sbjct: 179 QQLNRAINLARKNGFAIAIGHPHPSTVRALQQQL 212
>gi|152998595|ref|YP_001364276.1| hypothetical protein Shew185_0040 [Shewanella baltica OS185]
gi|151363213|gb|ABS06213.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS185]
Length = 251
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 99/229 (43%), Gaps = 14/229 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +
Sbjct: 14 ISQSHAAQIALIIDDIGYRHT--DQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIM 71
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQ-----TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
L +PMQA + T +T+ +V +N + ++ G N+ G++L
Sbjct: 72 LHLPMQALNGKALGLGGLTNTMTEAQIRASVVDAINSVPFA-------KGANNHMGSLLT 124
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+ + + ++ L F D ++ A +L +P + L+LD+ + +
Sbjct: 125 QLDDPMLWVMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDISAKALER 184
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + A+T G + +A + E++ + LQ+ + +VP S L
Sbjct: 185 QFSLMISQAQTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSL 233
>gi|157964031|ref|YP_001504065.1| hypothetical protein Spea_4220 [Shewanella pealeana ATCC 700345]
gi|157849031|gb|ABV89530.1| protein of unknown function DUF610 YibQ [Shewanella pealeana ATCC
700345]
Length = 251
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++IAI++ +G Q+ +A+ LPANITL+ + +A +G E ++ +PM
Sbjct: 19 ASQIAIIIDDIGYRQS--DKAVLSLPANITLSILPHTPLGKDLASKAYIQGNEILVHLPM 76
Query: 230 QAFDESYNEDDSYT-----LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
QA + + T +K V+ +N + ++ G N+ G+ L E
Sbjct: 77 QALNGKTIGPGALTNTMSEIKFKAQVEDSINSVPHA-------SGANNHMGSFLTQLNEP 129
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + F D ++ ++A + +P + +++LD+ + + ++ K
Sbjct: 130 MRWVMESLRQHNIYFIDSMTTKYTRAGIVAESMGIPILRREIFLDNDRSQSGLEKQFKHA 189
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A G+ + +A + E+I +++ LQ+ ++ +V S L
Sbjct: 190 ISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQL 233
>gi|220936444|ref|YP_002515343.1| protein of unknown function DUF610 YibQ [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997754|gb|ACL74356.1| protein of unknown function DUF610 YibQ [Thioalkalivibrio sp.
HL-EbGR7]
Length = 279
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAI++ LG +Q G + LP +T+A + EA +G+E +L +PMQA
Sbjct: 37 IAIIIDDLG-NQPGPGQRTLALPGPVTVAVLPHTPFARPLANEAHAQGKEVMLHLPMQAT 95
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ T+ + + + L +L GV N+ G++L + + E
Sbjct: 96 EALPLGPGGITVDMER--EALRETFLAALASVPHVRGVNNHMGSLLTRHIGHMDWFMAEL 153
Query: 293 AKR-GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE-KLKGLEEIART 350
A + GL F D ++ ++ + +A LP D++LD D ++ E ++ L +A+
Sbjct: 154 AAQSGLYFVDSRTTALSVAQRVALHHGLPATRRDVFLDTLPDNEEFVEAQMDQLISLAQR 213
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
G A+ + + +++V+ + L H + +VP+S
Sbjct: 214 RGHALAIGHPYGATLDVLERRLATLHEAGIELVPVS 249
>gi|310641393|ref|YP_003946151.1| protein [Paenibacillus polymyxa SC2]
gi|309246343|gb|ADO55910.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 311
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
N R+A+++ LG + GT+ +NL P IT+A + + EA +G + I+
Sbjct: 67 NQQQKRVAVIIDDLGNNMKGTKEILNL-PVKITVAVMPFLPTTKQDAMEAHNRGHDVIVH 125
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM+ +K T +++ ++ +++ G+ N+ G+ + S+K
Sbjct: 126 LPMEPKQGKPEWLGPGAIKANMTDEEVRAKVTAAIKDVPYAIGMNNHMGSKVTSDKRIMS 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
++ + GL F D ++ ++ LA K +P + D++LDD
Sbjct: 186 IVLDVCKEHGLFFVDSRTNYWSVVPELAAKKGMPPVRNDVFLDD 229
>gi|229084421|ref|ZP_04216701.1| hypothetical protein bcere0022_10610 [Bacillus cereus Rock3-44]
gi|228698961|gb|EEL51666.1| hypothetical protein bcere0022_10610 [Bacillus cereus Rock3-44]
Length = 253
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ G + GT+R ++ LP +T+A S + A +KG E IL +
Sbjct: 23 AHTNKVAIVIDDFGNNMKGTERMLS-LPIPLTVAVMPFLPSTKQDAVAAHQKGHEVILHM 81
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + + Q++ R+ +++ G+ N+ G+ + +++ +
Sbjct: 82 PMEPIKGKKEWLGPKAITTDLSDQEIEKRIEQAIQDVPHAIGMNNHMGSKVTADERIMRI 141
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I K L + D ++P ++ + +L +P + L+ DD I ++ + L +
Sbjct: 142 ILSVCKKHNLFYLDSKTNPNSVVPKIGKELGVPIVENQLFFDDVYTSSHITKQAQVL--L 199
Query: 348 ARTTGQAIGVAVAF-DESIEVISQWLQ 373
R + + VA+ E+ SQ +Q
Sbjct: 200 QRIQEKPVVVAIGHVGPPGEITSQVIQ 226
>gi|304412443|ref|ZP_07394050.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS183]
gi|307305787|ref|ZP_07585533.1| protein of unknown function DUF610 YibQ [Shewanella baltica BA175]
gi|304349278|gb|EFM13689.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS183]
gi|306911280|gb|EFN41706.1| protein of unknown function DUF610 YibQ [Shewanella baltica BA175]
Length = 251
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 14/229 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +
Sbjct: 14 ISQSHAAQIALIIDDIGYRHT--DQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIM 71
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQ-----TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
L +PMQA + T +T+ +V +N + ++ G N+ G++L
Sbjct: 72 LHLPMQALNGKALGLGGLTNTMTEAQIRASVVDAINSVPFA-------KGANNHMGSLLT 124
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+ + + ++ L F D ++ A +L +P + L+LD+ + +
Sbjct: 125 QLDDPMLWVMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDISAKALER 184
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + A T G + +A + E++ + LQ+ + +VP S L
Sbjct: 185 QFNLMISQAHTQGSLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSL 233
>gi|260655308|ref|ZP_05860796.1| divergent polysaccharide deacetylase family protein [Jonquetella
anthropi E3_33 E1]
gi|260629756|gb|EEX47950.1| divergent polysaccharide deacetylase family protein [Jonquetella
anthropi E3_33 E1]
Length = 308
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 21/252 (8%)
Query: 140 SKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL-PA-N 197
S + + + + GRE E + A +A+V+ G S T Q+ +L P+ +
Sbjct: 60 SPEPTIVEPEAGREPGE----------RSGKALMALVIDDFGTSLTIAQQIASLGGPSRS 109
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL---L 254
T A + ++ A K GQ I+ +PMQA + D Y + + +Q+ +
Sbjct: 110 FTWAIMPDCSASLSCAHLADKIGQPYIVHLPMQAIIDPAGHRD-YLIGTDSSPEQVRRQV 168
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA-KRGLLFFDDGSSPRNLTRVL 313
R+R R GV N+RG+ S++ + E A + G F D +S +++ R
Sbjct: 169 ERMRSLFPRA---LGVNNHRGSKATSSQNTMEAFGAAMADQTGWGFLDSRTSGKSVARST 225
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
K +P + ++D D D ++ + IAR+ G I + A ++ + +W+
Sbjct: 226 VAKYGVPALANMAFIDGVSDLDYMKGQFAKALRIARSRGVGIAICHARTGTLPFL-RWVC 284
Query: 374 QEHVRDVSVVPL 385
+ V VPL
Sbjct: 285 SQQFGGVQFVPL 296
>gi|227824417|ref|ZP_03989249.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904916|gb|EEH90834.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 333
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 6/231 (2%)
Query: 161 DKNFCSNASGA---RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAK 217
D+N A GA R+AIV+ G Q G R + LP +T A + + +
Sbjct: 104 DENSLGLAPGAYKGRLAIVIDDCGY-QLGPVRTLTSLPLKMTFAVIPFKPNSAAALSIIR 162
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
G A+L +PM+ S ++ + V QT Q+ + ++ ++ G GV N++G+
Sbjct: 163 NSGHTAMLHLPMEPV--SGGSSETRFVGVGQTKAQIASFVQEAIDSLPGISGVNNHQGSK 220
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
++ + + GL F D ++ + A L +P L+LD+ D I
Sbjct: 221 ATAHGPTIRAALSVIGENGLFFIDSRTNSATVAEREAGNLGIPTGHNSLFLDNSSDIGAI 280
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
EK+ ++A G I + A + E + + +++VP + L
Sbjct: 281 EEKIAQAVKLADRYGSVIVICHARPNTAEAWKRSYKAVIQSGITLVPAASL 331
>gi|160873170|ref|YP_001552486.1| hypothetical protein Sbal195_0044 [Shewanella baltica OS195]
gi|160858692|gb|ABX47226.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS195]
gi|315265395|gb|ADT92248.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS678]
Length = 251
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 14/229 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +
Sbjct: 14 ISQSHAAQIALIIDDIGYRHT--DQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIM 71
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQ-----TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
L +PMQA + T +T+ +V +N + ++ G N+ G++L
Sbjct: 72 LHLPMQALNGKALGLGGLTNTMTEVQIRASVVDAINSVPFA-------KGANNHMGSLLT 124
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+ + + ++ L F D ++ A +L +P + L+LD+ + +
Sbjct: 125 QLDDPMLWVMETLKQKHLYFVDSMTTRFTKAGETADQLGVPLLKRQLFLDNDISAKALER 184
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + A T G + +A + E++ + LQ+ + +VP S L
Sbjct: 185 QFSLMISEAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSL 233
>gi|109899910|ref|YP_663165.1| protein of unknown function DUF610, YibQ [Pseudoalteromonas
atlantica T6c]
gi|109702191|gb|ABG42111.1| protein of unknown function DUF610, YibQ [Pseudoalteromonas
atlantica T6c]
Length = 255
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 101/224 (45%), Gaps = 3/224 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A A+IAI++ +G + A+ L P N+ ++ + + ++ A ++ +E +
Sbjct: 20 TSAALSAQIAIIIDDVGNNSHRDAAALGL-PINVAISILPHKHLSQKYALMAHEQHREFL 78
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM++ E S L + + ++++ L + G+ N+ G+ L +
Sbjct: 79 LHMPMESMAGIKQE--SNVLLASMSDKRIVQTLNDAFASVPNALGLNNHMGSRLTQLETP 136
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ GL+F D ++ +A + +P + ++LD+ + KI + L
Sbjct: 137 MRTTMSYLHRHGLIFVDSRTTALTRAEAIAKQTKVPALRRHVFLDNDLSEAKIERQFNIL 196
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ AR G+++ + ++I + + L DV ++PLS +
Sbjct: 197 VKRARKYGRSLAIGHPHMQTIAYLKKRLPTLAQDDVQLIPLSAM 240
>gi|71278442|ref|YP_271042.1| hypothetical protein CPS_4393 [Colwellia psychrerythraea 34H]
gi|71144182|gb|AAZ24655.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 259
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A ++AIV+ +G T + A+ L P IT AF + + +A + ++
Sbjct: 26 SIAQANQVAIVIDDMGYRYTD-KHALTL-PGAITYAFLPHTTYGKKLAMQANSTNHDVLI 83
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
IPM++ E+ + L Q L S G+ N+ G+ L +
Sbjct: 84 HIPMES--ENRKKLGPGALTSNMDEQAFSQSLTKSFAEIPFAIGINNHMGSYLTQLYQPM 141
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ L F D +SP + + A +P ++LD+++ I ++ K L
Sbjct: 142 AWTMTFLKQHDLFFLDSKTSPHSQAQQAAIDFGVPVKARHIFLDNELTEKYISQQFKQLI 201
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ AI +A E++ +++ + + + +VPLS L
Sbjct: 202 HFAQKHQTAIAIAHPHPETVATLNKLIPTLKLHGIELVPLSRL 244
>gi|258645566|ref|ZP_05733035.1| polysaccharide deacetylase [Dialister invisus DSM 15470]
gi|260402924|gb|EEW96471.1| polysaccharide deacetylase [Dialister invisus DSM 15470]
Length = 375
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S++ R+A+V+ G+ +QR + +TLA N E + G IL
Sbjct: 153 SSSVTGRLAVVIDDAGLDLE-SQRIYEEIGVPLTLAVMPNKMYTSEAAAEWSRYGMPVIL 211
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
PM+ S E+ T+ + + + + L+ SL + G+ N++G+ ++
Sbjct: 212 HQPMEPVSGSGMEEK--TILTSMSDEAIRYMLKESLEQIPQAVGINNHQGSRATTDARVM 269
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
V+ E + RGL FFD ++ A +PY DL++D+ D +IR ++
Sbjct: 270 RVVMNELSHRGLFFFDSRTNTTTAADSAAASYGVPYARNDLFVDNSADEGEIRAMIQEGA 329
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ G I + + V + Q + + V +S L
Sbjct: 330 NRAKARGSYIIIGHCRPHTAAVFRDIVPQLQAQGIEFVYVSSL 372
>gi|227114297|ref|ZP_03827953.1| hypothetical protein PcarbP_15088 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 315
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G + + I +P I++A N +A ++G+E ++ +PM
Sbjct: 25 KLSIVIDDFGY-RPHNENQILAMPTAISIAVLPNAPYAREMATKAHQQGREVLIHLPMAP 83
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + +++ +R S+ G+ N+ G+ + ++ + + +
Sbjct: 84 MSKQPLERD--TLRPDMSSEEIQRIIRQSVNNVPYAVGLNNHMGSAMTASLPGMQKVMQA 141
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+ L F D + + + A N+ + ++LDD + +IR++ +IAR +
Sbjct: 142 LSAYQLYFLDSMTIGSSQSSQAAAGTNVKVIKRKVFLDDSQNEAEIRKQFTRAVQIARRS 201
Query: 352 GQAIGVAVAFDESIEVISQWL 372
G AI + +I V+ Q L
Sbjct: 202 GSAIAIGHPHPSTIRVLQQML 222
>gi|317494739|ref|ZP_07953151.1| divergent polysaccharide deacetylase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917341|gb|EFV38688.1| divergent polysaccharide deacetylase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 305
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 18/239 (7%)
Query: 165 CSNASG--ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
CS AS ++AIV+ G + + I +P I++A +A +G+E
Sbjct: 16 CSAASAYAGKLAIVIDDFGY-RPQEENKILQMPLAISVAVLPTAPHAREMATKAHAQGRE 74
Query: 223 AILQIPMQAFDESYNEDDSYT-----LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
++ +PM + E D+ ++ + + Q +N + Y++ G+ N+ G++
Sbjct: 75 ILIHLPMAPISKQPLEKDTLQPSMSEAEIQRIIHQAVNSVPYAV-------GMNNHMGSL 127
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRN--LTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ SN + + + + + L+F D + N +T A + + ++LDD +
Sbjct: 128 MTSNLQGMQKVMRTLEQYHFLYFLDSMTIGNSQVTNASA-GTGIKVIKRRVFLDDSQNEA 186
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
IR++ +IAR G AI + ++ V+ Q L V V P S L S P
Sbjct: 187 SIRQQFNRAIQIARKNGSAIAIGHPHPSTVRVLQQMLPSLPADIVLVRPSSLLNGASVP 245
>gi|70733871|ref|YP_257511.1| polysaccharide deacetylase family protein [Pseudomonas fluorescens
Pf-5]
gi|68348170|gb|AAY95776.1| polysaccharide deacetylase family protein [Pseudomonas fluorescens
Pf-5]
Length = 268
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+ A A +++++ LG + +R + L P +T A + + +EA + G+ I
Sbjct: 33 TAAAPKAYLSLIIDDLGQNLPRDRRVLAL-PGPVTTAIMPDTPHAAEFAREAHRAGKIVI 91
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM + +++L RL + + G+ N+ G+ + + ++
Sbjct: 92 LHMPMDP------ATGPFAWHPELPIEELQKRLEAAFQAVPYTSGINNHMGSRMTAQPQA 145
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + +R F D +S + + A K+ L + D++LDD+ I ++L+
Sbjct: 146 MAWLMADLQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFLDDERTEAAISQQLQTA 205
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++AR G A+ + + +++ V+ + L + + + + + + L S
Sbjct: 206 IKLARKQGSAVMIGHPYPQTLAVLERELPRLKAQGIEWIDIKSMISLRS 254
>gi|212712560|ref|ZP_03320688.1| hypothetical protein PROVALCAL_03655 [Providencia alcalifaciens DSM
30120]
gi|212684776|gb|EEB44304.1| hypothetical protein PROVALCAL_03655 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S A++AIV+ G + I LP I++A N A ++G++ ++ +P
Sbjct: 23 SAAKLAIVIDDFGY-RVKEDNQILALPVAISIAILPNSPHGAEVAATAYQQGRDILIHMP 81
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ + E D TL + + +++ ++ ++ R G+ N+ G+ + S+ +
Sbjct: 82 MKPLSKQPLEKD--TLAPSMSAEEVDRIIKNAISRVPHAKGMNNHMGSEMTSSLSGMRNV 139
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ ++ L F D + A + +P ++++D+ ++ R +L A
Sbjct: 140 MRSLSQSNLFFLDSVTIGNTQAVNAAKEFGVPSAKRNIFIDNHQSEEETRTQLNKAIAYA 199
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G A+ + ++ + +++ Q D+ +VP+S L
Sbjct: 200 RKHGSAVAIGHPHPSTVRALQKFIPQVPA-DIELVPVSTL 238
>gi|237728916|ref|ZP_04559397.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226909538|gb|EEH95456.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 311
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + ++AIV+ G + T+ + +P+ I++A N +A G E
Sbjct: 18 FATPVFAGKLAIVIDDFGY-RPHTENQVLAMPSTISVAVLPNAPHAREMAIKAHNSGHEV 76
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R ++ + G+ N+ G+ + S+
Sbjct: 77 LIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIRDAVSKVPNAVGLNNHMGSAMTSSLF 134
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + + A + + ++LDD + IR +
Sbjct: 135 GMQKVMQALERYDLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 194
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
E+AR G AI + ++ V+ Q L
Sbjct: 195 AVELARRNGSAIAIGHPHPSTVRVLQQML 223
>gi|329929364|ref|ZP_08283112.1| divergent polysaccharide deacetylase [Paenibacillus sp. HGF5]
gi|328936451|gb|EGG32896.1| divergent polysaccharide deacetylase [Paenibacillus sp. HGF5]
Length = 293
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++A+++ G Q GT+ +NL P IT+A + + + A ++G + I+ +PM+
Sbjct: 61 KLAVIIDDFGNDQKGTEEMLNL-PVKITVAVMPFLPTSKKDAEAAHQQGHDVIIHMPMEP 119
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + + T +++ R+ ++ G+ N+ G+ + ++ ++
Sbjct: 120 KQGRSSWLGPGAILSSLTDEEIRKRMEEAIDSVPYAVGINNHMGSKVTGDERVMSIVLDV 179
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE--IAR 349
+RGL F D ++ ++ LA + +P + D++LDD + ++L+ + + R
Sbjct: 180 CRERGLFFVDSKTNYYSVVGKLAASMGMPSIANDIFLDDVHTVQHVSKQLQTAAQHAVER 239
Query: 350 TTGQAIG 356
T+ AIG
Sbjct: 240 TSCIAIG 246
>gi|238760441|ref|ZP_04621579.1| hypothetical protein yaldo0001_39810 [Yersinia aldovae ATCC 35236]
gi|238701336|gb|EEP93915.1| hypothetical protein yaldo0001_39810 [Yersinia aldovae ATCC 35236]
Length = 336
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A +++IV+ G + + + P I++A N +A +G+E
Sbjct: 17 LASAAQAGKLSIVIDDFGYRPQNENKILQM-PLPISVAILPNAPHAKEMAMKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYAKGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQALEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
E+AR G AI + +I+V+ Q L Q
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQ 224
>gi|261408347|ref|YP_003244588.1| hypothetical protein GYMC10_4558 [Paenibacillus sp. Y412MC10]
gi|261284810|gb|ACX66781.1| protein of unknown function DUF610 YibQ [Paenibacillus sp.
Y412MC10]
Length = 293
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++A+++ G Q GT+ +NL P IT+A + + + A ++G + I+ +PM+
Sbjct: 61 KLAVIIDDFGNDQKGTEEMLNL-PVKITVAVMPFLPTSKKDAEAAHQQGHDVIIHMPMEP 119
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + + T +++ R+ ++ G+ N+ G+ + ++ ++
Sbjct: 120 KQGRSSWLGPGAILSSLTDEEIRKRMEEAIDSVPYAVGINNHMGSKVTGDERVMSIVLDV 179
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA--R 349
+RGL F D ++ ++ LA K +P + D++LDD + ++L+ + A R
Sbjct: 180 CRERGLFFVDSKTNYYSVVGKLAAKKGMPSISNDIFLDDVHTVQHVSKQLQTAAQHAEER 239
Query: 350 TTGQAIG 356
T+ AIG
Sbjct: 240 TSCIAIG 246
>gi|91795046|ref|YP_564697.1| protein of unknown function DUF610, YibQ [Shewanella denitrificans
OS217]
gi|91717048|gb|ABE56974.1| protein of unknown function DUF610, YibQ [Shewanella denitrificans
OS217]
Length = 245
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F GA++AI++ +G QT A+ LP ITL+ + + ++ KKG E
Sbjct: 2 FIQPVFGAKLAIIIDDIGYRQT--DEAVLSLPNTITLSVLPHTPLGQKLAQDGHKKGHEI 59
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PMQA + E L T Q+ +L ++ G N+ G++L ++
Sbjct: 60 MLHLPMQALNGK--ELGPGGLTNVMTEGQIKQQLHSAVSSIPFAKGANNHMGSLLTQMQD 117
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D ++ A L +P + ++LD+ + ++ +
Sbjct: 118 PMRWVMESLKQNNLYFVDSMTTRFTKATASAQSLGVPTLKRQIFLDNDISEAALQRQFNL 177
Query: 344 LEEIARTTGQAIGVAVAFDESIEVI 368
+ A+ Q I +A E+I +
Sbjct: 178 IMVKAKQEQQVIAIAHPHPETIRFL 202
>gi|288555887|ref|YP_003427822.1| putative polysaccharide de-acetylase [Bacillus pseudofirmus OF4]
gi|288547047|gb|ADC50930.1| putative polysaccharide de-acetylase [Bacillus pseudofirmus OF4]
Length = 271
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
+EA G E I+ +P++ + + + +++ R+ ++ G+ N+
Sbjct: 77 EEAHHAGLEVIIHLPLEPKKGKASWLGPKGITSDLSNEEVRKRVEEAIEDVPHAVGLNNH 136
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV- 332
G+ ++ ++ VI + GL D G+S +++ LA + +PY + D++LDD +
Sbjct: 137 MGSKIVEDRRIMGVILDVVKEHGLYVIDSGTSNKSVISELAEERRIPYSIRDVFLDDSLS 196
Query: 333 DRDKIREKLKGLEEIARTTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R + ++++ L+++A G AIG V V +E+ I L+ V +VP S +
Sbjct: 197 SRSHVAKQMRLLQKVAAVEGDAIGIGHVGVKGEETAAGILSSLRDLEKNKVQIVPASHI 255
>gi|148263945|ref|YP_001230651.1| protein of unknown function DUF610, YibQ [Geobacter uraniireducens
Rf4]
gi|146397445|gb|ABQ26078.1| protein of unknown function DUF610, YibQ [Geobacter uraniireducens
Rf4]
Length = 313
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFAS-NGNSLDRWMKEAKK-KGQEAILQIPMQ 230
+AI+V +G S Q +L+ +I + F+ G + + + EA G E ++ +PM+
Sbjct: 97 VAIIVDDMGSS---MQEVRSLMAIDIPVTFSIIPGLAKSKGVAEAAHGNGGEVMVHMPME 153
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ L ++++ +++ +++ L+ G N+ G+ N+E + + K
Sbjct: 154 PKGYPKQRMEKNGLLLSESDEEIAAKVKAYLQAVPYAVGANNHMGSRFTENEEKMQSVLK 213
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
R + F D +SP ++ LA K+ L ++LD+ + I+ +L+ + + AR
Sbjct: 214 VLKGREMFFVDSKTSPASVGYSLARKMGLKAGTRQVFLDNVQNVAAIKAQLQQVADTARK 273
Query: 351 TGQAIGVAVAFDESIEVISQWL 372
G AI + +I+ +S L
Sbjct: 274 RGSAIAICHPHQTTIQALSSML 295
>gi|332307949|ref|YP_004435800.1| hypothetical protein Glaag_3602 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175278|gb|AEE24532.1| protein of unknown function DUF610 YibQ [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 273
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LP N+ ++ + + ++ A ++ +E +L +PM++ E + L + + +
Sbjct: 60 LPVNVAISILPHKHFSQKYALLAHEQRREYLLHMPMESMAGLKQEAN--VLLASMNDKTI 117
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+ L + G+ N+ G+ L + + GL+F D +S + +
Sbjct: 118 VQTLHAAFASVPNALGMNNHMGSRLTQLETPMRTTMDYLHRHGLIFVDSRTSAQTQAEAI 177
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A + N+P + ++LD+ + DKI + L AR G++I + ++I + + L
Sbjct: 178 AKQQNVPALRRHVFLDNVLAEDKIALQFNLLVRKARKYGRSIAIGHPHKQTIAYLQKRLP 237
Query: 374 QEHVRDVSVVPLSCL 388
+V +VPLS +
Sbjct: 238 TLAQENVQLVPLSAM 252
>gi|114045553|ref|YP_736103.1| hypothetical protein Shewmr7_0040 [Shewanella sp. MR-7]
gi|113886995|gb|ABI41046.1| protein of unknown function DUF610, YibQ [Shewanella sp. MR-7]
Length = 251
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 4/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
++ A+IA+++ +G T A+ LP+ +TL+ + ++ K A KG E +L +
Sbjct: 17 SNAAQIALIIDDIGYRHT--DEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHEIMLHL 74
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQA + T +++T Q+ + + ++ G N+ G++L +
Sbjct: 75 PMQALNGKALGVGGLTNNMSET--QIRSSVLAAIASVPFAKGANNHMGSLLTQLDDPMLW 132
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + ++ L F D ++ A L +P + L+LD+ V + ++ +
Sbjct: 133 VMETLKQKQLYFVDSMTTKFTKAGDKADSLGVPLLRRQLFLDNDVSAAALEKQFNLMISQ 192
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A + G + +A + E+I + L + + +VP S L
Sbjct: 193 AHSQGSLVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSL 233
>gi|330961870|gb|EGH62130.1| hypothetical protein PMA4326_25287 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 258
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG + R + L P +TLA + + ++A + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNPERDSRTLAL-PGPVTLAIMPDTPHATDFARQAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLA------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMAWLMA 143
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R L F D +S + + A + L + D++LDD+ + I +L+ ++A
Sbjct: 144 ELQRRHLFFVDSRTSAKTVAAAEAQRAGLASVSRDVFLDDERTAEAITRQLQTAVKLAHK 203
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G A+ + + +++V+ + L + + V + L +
Sbjct: 204 QGSAVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSM 241
>gi|170729198|ref|YP_001763224.1| hypothetical protein Swoo_4880 [Shewanella woodyi ATCC 51908]
gi|169814545|gb|ACA89129.1| protein of unknown function DUF610 YibQ [Shewanella woodyi ATCC
51908]
Length = 251
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A++AI++ +G Q+ A+ LP NITL+ + A ++G E +
Sbjct: 13 SSFTHAAQVAIIIDDIGYRQS--DEAVLTLPENITLSVLPHTPLGHSVASAAHERGHEIM 70
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PMQA + T + ++ +L ++ + G N+ G++L +E
Sbjct: 71 VHLPMQALNGKALGPGGLTNTMGES--ELKKSIQSAFLSVPFAKGANNHMGSLLTQLEEP 128
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + ++ L F D ++ A +L +P + +L+LD+ + + + L
Sbjct: 129 MLWVMESLKQQDLYFVDSMTTRFTKAGTTADQLGIPQLKRELFLDNDISAAALDRQFSKL 188
Query: 345 EEIARTTGQAIGVAVAFDESIEVI 368
+A GQ + +A + E+IE +
Sbjct: 189 ITLAHNQGQIVAIAHPYPETIEFL 212
>gi|116750484|ref|YP_847171.1| hypothetical protein Sfum_3062 [Syntrophobacter fumaroxidans MPOB]
gi|116699548|gb|ABK18736.1| protein of unknown function DUF610, YibQ [Syntrophobacter
fumaroxidans MPOB]
Length = 430
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 97/217 (44%), Gaps = 1/217 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ G + ++ +++ P ++ A N + A +E +L +PM+
Sbjct: 203 KVAIVIDDFGQNLEVAKKFLSI-PLPLSFAILPNQRHTAEIAELAHAHHREVLLHLPMEP 261
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ S L + + +L L +L + GV N+ G+ N S V+ E
Sbjct: 262 QGYPKMDPGSGALLTSMSRGRLRRTLLAALDSTPYFIGVNNHMGSKFTENTPSMRVVMSE 321
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
R L F D ++ ++ LA + +P D++LD + + ++ ++ L A+
Sbjct: 322 LRHRKLFFLDSATTGDSVGFALAREYGIPARKRDIFLDHTLTDEAVQSQVDQLIRKAKIE 381
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G A+ + + +++ + + + + +V+VVP S L
Sbjct: 382 GTALAIGHPHEVTLKALIEGVDRFKEENVAVVPSSEL 418
>gi|83858363|ref|ZP_00951885.1| polysaccharide deacetylase family protein [Oceanicaulis alexandrii
HTCC2633]
gi|83853186|gb|EAP91038.1| polysaccharide deacetylase family protein [Oceanicaulis alexandrii
HTCC2633]
Length = 322
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AI++ +G+ ++ + L A +TL+ + + A G+E + +PM+
Sbjct: 98 QLAIIMDDVGLDVAAAEQLLAL-DAPLTLSILPYAEAAPVIARRAADAGREVFVHLPMEP 156
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ Y L Q+ ++ +R+R++ R G G N+ G+ L S++ + + +F
Sbjct: 157 V--GVEDPGPYALTEFQSADEMSSRIRWAFSRVPGATGFNNHMGSRLTSDRRAMDALFTA 214
Query: 292 FA-KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
A L+F D + PR+ A L + D++LD D + +L +A
Sbjct: 215 GAFPSQLIFVDSLTHPRSQAARSARAAGLNALTRDVFLDHAPDEASVSAQLNLALALALQ 274
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
GQAI + +++ V++ ++ V +V + L+ +S
Sbjct: 275 NGQAIAIGHPRPQTLAVLADLTRRAEAVGVELVTVQALSATAS 317
>gi|227328077|ref|ZP_03832101.1| hypothetical protein PcarcW_12385 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 315
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G + + I +P I++A N +A ++G+E ++ +PM
Sbjct: 25 KLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHLPMAP 83
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + ++ +R S+ G+ N+ G+ + ++ + + +
Sbjct: 84 MSKQPLERD--TLRPDMSSDEIQRIIRQSVNNVPYAVGLNNHMGSAMTASLPGMQKVMQA 141
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+ L F D + + + A N+ + ++LDD + +IR++ +IAR +
Sbjct: 142 LSAYQLYFLDSMTIGSSQSSQAAAGTNVKVIKRKVFLDDSQNEAEIRKQFTRAVQIARRS 201
Query: 352 GQAIGVAVAFDESIEVISQWL 372
G AI + +I V+ Q L
Sbjct: 202 GSAIAIGHPHPSTIRVLQQML 222
>gi|238794396|ref|ZP_04638007.1| hypothetical protein yinte0001_39420 [Yersinia intermedia ATCC
29909]
gi|238726297|gb|EEQ17840.1| hypothetical protein yinte0001_39420 [Yersinia intermedia ATCC
29909]
Length = 343
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 3/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + + P I++A N +A +G+E ++ +
Sbjct: 21 AQAGKLSIVIDDFGYRPQNENKILQM-PLPISVAILPNAPYAREMAIKAHNQGREILIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPLSKQPLERD--TLQPSMSSEEIQRIMRQAVNNVPYAKGMNNHMGSAMTSSFSGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +E L F D + + A ++ + ++LDD + IR++ E+
Sbjct: 138 VMQELDHYQLYFLDSVTIGNSQAGRAAEGTHVKVIKRKVFLDDSQNEAAIRQQFNRAVEL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G AI + +I+V+ Q L Q V V P + L
Sbjct: 198 ARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALL 238
>gi|308188636|ref|YP_003932767.1| hypothetical protein Pvag_3176 [Pantoea vagans C9-1]
gi|308059146|gb|ADO11318.1| Uncharacterized protein yibQ precursor [Pantoea vagans C9-1]
Length = 300
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++AIV+ +G + + + P I++A N +A + G E
Sbjct: 16 FSYAAQAGKLAIVIDDVGYRPAEENKVLQM-PQAISVAVLPNAPHAHEMATKAHQSGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLK-----VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
++ +PM + E D+ T + VT+ ++ +N + Y++ G+ N+ G+ +
Sbjct: 75 LIHLPMAPLSKQPLEKDTLTPEMSSEEVTRIMRNAVNNVPYAV-------GLNNHMGSRM 127
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
S+ + + + L F D + + A + + ++LDD D + IR
Sbjct: 128 TSSLPGMQKVMQALNHYNLYFLDSMTIANSQAIPAAQGTQVKVLKRRVFLDDSQDINAIR 187
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
++ ++A+ G AI + ++ V+ Q L
Sbjct: 188 QQFSRAVKLAQRDGYAIAIGHPHPTTVRVLQQML 221
>gi|114565173|ref|YP_752687.1| protein of unknown function DUF610, YibQ [Shewanella frigidimarina
NCIMB 400]
gi|114336466|gb|ABI73848.1| protein of unknown function DUF610, YibQ [Shewanella frigidimarina
NCIMB 400]
Length = 238
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 103/226 (45%), Gaps = 14/226 (6%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A+ ++AI++ +G T A LP++ITL+ + + ++ KG E +L +
Sbjct: 3 ATATKLAIIIDDIGYRLT--DEAALSLPSSITLSVLPHTPLGQKLAQDGYHKGHEIMLHL 60
Query: 228 PMQAFD-----ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
PMQA + +D ++ Q +Q + + ++ G N+ G++L
Sbjct: 61 PMQALNGKALGPGGLTNDMNEAQIKQQLQSAFSNIPFAK-------GANNHMGSLLTQMD 113
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + + ++ L F D ++ A +L +P + ++LD+ + + + +
Sbjct: 114 EPMLWVMQSLKQQQLFFVDSFTTKYTKASSKAMQLGVPSLRRHIFLDNDIGERALERQFQ 173
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ ++ G+ + +A + E+I ++ L + + D+++VP S L
Sbjct: 174 QMITQSKQQGKLVVIAHPYPETIRFLNANLARLNDNDITLVPTSQL 219
>gi|222823948|ref|YP_002575522.1| polysaccharide deacetylase domain protein [Campylobacter lari
RM2100]
gi|222539170|gb|ACM64271.1| conserved hypothetical protein, polysaccharide deacetylase domain
protein [Campylobacter lari RM2100]
Length = 355
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P+ A Y++ + TL +Q++ R+ + + + N+ G++ +NK+
Sbjct: 194 MVHLPLAAI--KYDKAELNTLHPGDDMQKIGKRVAFVKEQFPKVKFINNHTGSLFTANKQ 251
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E +F F + +F D + ++ + LA + N PY+ D++LD++ D I+ +LK
Sbjct: 252 AMEKLFSAFKQNDFVFVDSRTIGKSKAKNLASQFNQPYIARDVFLDNEDDIVYIKNQLKQ 311
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
E A+ G AI + +++ + + Q +E + V +V L+
Sbjct: 312 AVEEAKKKGFAIAIGHPREKTFKALVQ--SKELLNSVELVYLN 352
>gi|311695899|gb|ADP98772.1| secreted protein containing DUF610, YibQ [marine bacterium HP15]
Length = 271
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 3/216 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAI++ +G S +R NL +TLAF D + A K+ +E +L PM A
Sbjct: 32 IAIIIDDMGHSLVEGERLANL-DQPLTLAFLPYRPHTDSLARLAYKQHKEIMLHAPM-AN 89
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+Y L Q + LR +L+ GV N+ G++L + + + KE
Sbjct: 90 TRNYGLGPG-GLTPEMDEQSMATTLRRALQSIPHVQGVNNHMGSLLTQQLQPMDWVMKEL 148
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ + F D + ++ +A +P M D++LD + + + + K L + A+ G
Sbjct: 149 FRYPVYFIDSRTIASSVAGDVAAAYRIPTMTRDVFLDHEQTEEFVDRQFKLLIKRAKENG 208
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AIG+ +++ + + L + + +++ +S L
Sbjct: 209 SAIGIGHPHKVTVDYLEKHLPKLDEQGIAIATVSGL 244
>gi|170718741|ref|YP_001783929.1| protein of unknown function DUF610 YibQ [Haemophilus somnus 2336]
gi|168826870|gb|ACA32241.1| protein of unknown function DUF610 YibQ [Haemophilus somnus 2336]
Length = 285
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + I LP +++A + + ++AK++ ++ ++ +PMQ
Sbjct: 32 KLAIVIDDIG-YRLKEDNQIYSLPKEVSVAIIPSAPHAKQRDQQAKQQNRDILIHLPMQP 90
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
++ ED L ++Q ++ R+R + G+ N+ G+ ++K+ +
Sbjct: 91 LNQQKIEDGGIKLGMSQP--EVYQRVRNAKSILPNAIGMNNHMGSAATADKDLMNKLMTA 148
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + R++ +A + +P + ++LDD ++ + + AR
Sbjct: 149 LLQQNLFFLDSRTIGRSVAGKIAREFGIPTLERHIFLDDSDKLSDVQRQWNAAIQYARKR 208
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ ++Q +D+ +V + L +
Sbjct: 209 GTAIVIGHPRKNTIAVLQMGIKQLP-KDIQLVGIGSLWR 246
>gi|94499747|ref|ZP_01306283.1| hypothetical protein RED65_14537 [Oceanobacter sp. RED65]
gi|94427948|gb|EAT12922.1| hypothetical protein RED65_14537 [Oceanobacter sp. RED65]
Length = 293
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 8/236 (3%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S+ S A++AI++ +G S AI LP NIT A + + + A + G+E +
Sbjct: 22 ASSPSVAQLAIIIDDIGNSWQKGLDAI-ALPGNITFAVMPHRKHSIQLAERAGRLGKEVM 80
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L PM + + + + + +L RLR+++ G+ N+ G+ L ++ +
Sbjct: 81 LHAPMATMNNRELGAGALHENLGEKLFKL--RLRFAIDNIPYVRGINNHMGSRLTTSTNA 138
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ L F D + ++ A + L D++LD + D + + K
Sbjct: 139 MGWVMDVLKEKQLFFVDSRTHANSIAFEQAQQYGLASAKRDVFLDHERTLDAVHRQFKLA 198
Query: 345 EEIARTTGQAIGVAVAFDESI----EVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
IA+ G AI + + ++ VI Q L+Q H+ + V L S P++
Sbjct: 199 VTIAKEYGNAIAIGHPHNVTLRYLEHVIPQ-LEQHHIETIFVSALLKTGNQSRPNT 253
>gi|325275726|ref|ZP_08141608.1| hypothetical protein G1E_20175 [Pseudomonas sp. TJI-51]
gi|324099130|gb|EGB97094.1| hypothetical protein G1E_20175 [Pseudomonas sp. TJI-51]
Length = 259
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
++I++ LG S R + L P +T+A + + ++A K G+ IL +PM
Sbjct: 30 MSIIIDDLGQSPNRDSRTLAL-PGPVTMAIMPDTPHATDFARQAHKAGKTVILHMPMDPA 88
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y ++L RL +L + G+ N+ G+ + + +E + E
Sbjct: 89 TGPYAWHPGIA------GEELARRLDSALLKVPYAAGINNHMGSRMTAQREPMAWLMGEL 142
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R L F D +S + A L ++ D++LDD + I +L+ +A G
Sbjct: 143 QRRHLFFVDSRTSAATVAAAEAQAQGLAHVSRDVFLDDVRTTEAIAGQLQQGVALAHKQG 202
Query: 353 QAIGVAVAFDESIEVISQWL 372
A+ + + +++EV+++ L
Sbjct: 203 SAVLIGHPYPQTLEVLAREL 222
>gi|311030007|ref|ZP_07708097.1| divergent polysaccharide deacetylase [Bacillus sp. m3-13]
Length = 257
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S ++AIV+ G + GT+ ++L P +T+A ++ ++ + A + G E IL +P
Sbjct: 28 SSNKVAIVIDDFGNNMKGTEEILHL-PVPLTVAVMPFLSTTEQDAEMAHRLGHEVILHLP 86
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ + + T +++ R+ ++ G+ N+ G+ + ++K +I
Sbjct: 87 MEPLKGKSSWLGPGAITSNLTDKEIYKRVNDAIDSVPYAVGINNHMGSKITADKRIMRII 146
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+R L + D ++ +++ LA +L +P++ +L+ D+ + I ++ L I
Sbjct: 147 LGICKERNLYYLDSKTTKKSVVAELATELGVPFLENELFFDEVYSTNHIVKQTNHL--IK 204
Query: 349 RTTGQ----AIG-VAVAFDESIEVISQWL 372
+T AIG V V +++ V+ Q++
Sbjct: 205 KTEVDDSIIAIGHVGVVGEKTAGVLKQYI 233
>gi|332139955|ref|YP_004425693.1| hypothetical protein MADE_1002730 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549977|gb|AEA96695.1| hypothetical protein MADE_1002730 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 313
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LP +T + + A+K+G+ +L +PMQA ++ L +
Sbjct: 47 LPKEVTFSILPQTPLASEIAQRAEKEGRAVMLHMPMQA--QNGKNMGPLGLSTDMYAGAI 104
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+ +R +++ G+ N+ G+ +E+ E + KE ++GL F D ++ + + +
Sbjct: 105 THNVRRAMKSVPNAVGINNHMGSAFTGQREAMEALLKEVKRQGLFFVDSRTTVLSKGKEI 164
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
A +L +P ++LD +++ + ++ ++ IA+ G+ + + +I+ + L
Sbjct: 165 AEQLGVPNASRQVFLDHRLEPAFLLQQFNEMKRIAKREGRVLVIGHPHPATIDFLQTHL 223
>gi|197286993|ref|YP_002152865.1| exported polysaccharide deacetylase [Proteus mirabilis HI4320]
gi|194684480|emb|CAR46240.1| putative exported polysaccharide deacetylase [Proteus mirabilis
HI4320]
Length = 321
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 90/210 (42%), Gaps = 13/210 (6%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ G + + + L P +++A N +A +G+E ++ +
Sbjct: 28 AFSAKLAIVIDDFGYRKKEDNQILQL-PTAVSIAILPNSPHGKEMATKAHAQGREILIHM 86
Query: 228 PMQAFDESYNEDDSYTLKVTQT-----VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
PM + E D+ + Q +Q +NR+ Y++ G+ N+ G+ + S++
Sbjct: 87 PMAPISKQPLEKDTLKPSMDQAEINRIIQNAINRVPYAV-------GMNNHMGSAMTSDR 139
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ + + K L F D + A +P + ++LD+ + R++L
Sbjct: 140 QAMDRVIKALNHSDLYFLDSVTIGNTQAATAAKAAGVPSLRRHVFLDNVQTEAETRQQLN 199
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+AR G AI + ++ + Q L
Sbjct: 200 RAINLARKNGFAIAIGHPHPSTVRALQQQL 229
>gi|311277460|ref|YP_003939691.1| hypothetical protein Entcl_0129 [Enterobacter cloacae SCF1]
gi|308746655|gb|ADO46407.1| protein of unknown function DUF610 YibQ [Enterobacter cloacae SCF1]
Length = 313
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ +G + + + LP NI++A N +A G+E ++ +
Sbjct: 21 AWAGKLAIVIDDVGY-RPQQENQVLALPVNISVAVLPNAPHAREMATKAHNGGREVLIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + ++ +R ++ + G+ N+ G+ + SN +
Sbjct: 80 PMAPLSKQPLEKD--TLRPDMSSDEIERIIRDAVSKVPYAVGMNNHMGSAMTSNLFGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + ++ L F D + + A + + ++LDD + IR + ++
Sbjct: 138 VMQALSRYNLYFLDSMTIGNSQATRAAAGTGVKVIKRKVFLDDTQNEADIRFQFNRAIQL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWL 372
AR TG AI + ++ V+ Q +
Sbjct: 198 ARRTGSAIAIGHPHPSTVRVLQQMV 222
>gi|15614055|ref|NP_242358.1| hypothetical protein BH1492 [Bacillus halodurans C-125]
gi|10174109|dbj|BAB05211.1| BH1492 [Bacillus halodurans C-125]
Length = 273
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A+ G E I+ +P++ + + +V ++ +R+R + G+ N+ G
Sbjct: 76 AQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMG 135
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD-QVDR 334
+ ++ N++ I + ++ D G+SP +L LA +L +PY ++LD+ R
Sbjct: 136 SKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNTHSSR 195
Query: 335 DKIREKLKGLEEIARTTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
++ + ++ L + A+ + IG V V DE+ I L + + +VP+S L L
Sbjct: 196 KEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQL--L 253
Query: 392 SSP 394
SP
Sbjct: 254 PSP 256
>gi|113968388|ref|YP_732181.1| hypothetical protein Shewmr4_0042 [Shewanella sp. MR-4]
gi|113883072|gb|ABI37124.1| protein of unknown function DUF610, YibQ [Shewanella sp. MR-4]
Length = 251
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Query: 164 FC-SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
C ++++ A+IA+++ +G T A+ LP+ +TL+ + ++ K A KG E
Sbjct: 12 LCIASSNAAQIALIIDDIGYRHT--DEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHE 69
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+L +PMQA + T +++ Q+ + + ++ G N+ G++L
Sbjct: 70 IMLHLPMQALNGKALGVGGLTNNMSEA--QIRSSVLAAIASVPFAKGANNHMGSLLTQLD 127
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + ++ L F D ++ A L++P + L+LD+ V + ++
Sbjct: 128 DPMLWVMETLKQKQLYFVDSMTTKFTKAGDKADSLSVPLLRRQLFLDNDVSAAALEKQFN 187
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ A + G + +A + E+I + L + + +VP S L
Sbjct: 188 LMISQAHSQGSLVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSL 233
>gi|119390469|pdb|2NLY|A Chain A, Crystal Structure Of Protein Bh1492 From Bacillus
Halodurans, Pfam Duf610
Length = 245
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A+ G E I+ +P++ + + +V ++ +R+R + G+ N+ G
Sbjct: 48 AQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMG 107
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD-QVDR 334
+ ++ N++ I + ++ D G+SP +L LA +L +PY ++LD+ R
Sbjct: 108 SKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNTHSSR 167
Query: 335 DKIREKLKGLEEIARTTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
++ + ++ L + A+ + IG V V DE+ I L + + +VP+S L L
Sbjct: 168 KEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQL--L 225
Query: 392 SSP 394
SP
Sbjct: 226 PSP 228
>gi|229587895|ref|YP_002870014.1| hypothetical protein PFLU0334 [Pseudomonas fluorescens SBW25]
gi|229359761|emb|CAY46611.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 262
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 6/184 (3%)
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
R + LP +T A + + +EA K G+ IL +PM +
Sbjct: 45 RRVLALPGPVTTAIMPDTPHAAEFAREAHKAGKIVILHMPMDP------ATGPFAWHPEL 98
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+++L RL + + G+ N+ G+ + + + + E +R F D +S +
Sbjct: 99 PIEELGKRLDAAFQAVPYTAGINNHMGSRMTAQPAAMAWLMAELQRRNKFFVDSRTSAQT 158
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ A K+ L ++ D++LDD+ I +L+ ++A G A+ + + +++ V+
Sbjct: 159 VAAAEAQKIGLAHVSRDVFLDDERTEAAITTQLQTAIKLAHKQGSAVMIGHPYPQTLAVL 218
Query: 369 SQWL 372
+ L
Sbjct: 219 EREL 222
>gi|62182199|ref|YP_218616.1| hypothetical protein SC3629 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|197248431|ref|YP_002148639.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|224585506|ref|YP_002639305.1| hypothetical protein SPC_3788 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62129832|gb|AAX67535.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|197212134|gb|ACH49531.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|224470034|gb|ACN47864.1| hypothetical protein SPC_3788 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322716687|gb|EFZ08258.1| Uncharacterized protein yibQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 320
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVLKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|154175021|ref|YP_001408001.1| polysaccharide deacetylase family protein [Campylobacter curvus
525.92]
gi|112803301|gb|EAU00645.1| divergent polysaccharide deacetylase family [Campylobacter curvus
525.92]
Length = 464
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQA + ++ + TL + + +L R+R + N+ G+ S+ +
Sbjct: 302 MIHLPMQA--KHFDHPEIGTLNTNDSFESILKRIRKIRADFPRAVYMNNHTGSKFTSDYD 359
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ F +F D + + +A K + PY+ D++LDD R +R +L
Sbjct: 360 AMDKAYRAFISEKFIFMDSKTIGHTVVAEVARKYSQPYISRDIFLDDDPSRSGVRRQLVN 419
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
E+A+ AI + +I++I + + +RDV VV
Sbjct: 420 AVELAKKRSYAIAIGHPKKNTIDIIKES-KDTILRDVDVV 458
>gi|85710828|ref|ZP_01041889.1| hypothetical protein OS145_02335 [Idiomarina baltica OS145]
gi|85695232|gb|EAQ33169.1| hypothetical protein OS145_02335 [Idiomarina baltica OS145]
Length = 235
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 194 LPANITLA---FASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
LP +IT A F G S + +A +G++ + +PMQA + N L +
Sbjct: 26 LPGDITFAILPFTPYGRS---FALKAHHQGKQIMAHVPMQAL--AGNALGLGALTADMSS 80
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +LR L G+ N+ G+ L + + + + L F D ++ +
Sbjct: 81 AEIKLKLRQVLDDIPYVAGINNHMGSQLTQLTQPMQAVMESLKNHDLYFIDSRTTEYTVA 140
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
+A +P +++D++ D + E+ L +IA G AI + + E+I+ + Q
Sbjct: 141 EKMAQSYQVPVARRHVFIDNETDEQYLTEQFDELIQIAHAHGSAIAIGHPYPETIKFLKQ 200
Query: 371 WLQQEHVRDVSVVPLSCL 388
L+ DV +V S L
Sbjct: 201 RLKSLKEDDVQLVFASEL 218
>gi|16762604|ref|NP_458221.1| hypothetical protein STY4089 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144093|ref|NP_807435.1| hypothetical protein t3813 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163814|ref|ZP_03349524.1| hypothetical protein Salmoneentericaenterica_28901 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213420031|ref|ZP_03353097.1| hypothetical protein Salmonentericaenterica_20595 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427149|ref|ZP_03359899.1| hypothetical protein SentesTyphi_16972 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213647904|ref|ZP_03377957.1| hypothetical protein SentesTy_11844 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289824144|ref|ZP_06543741.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25367617|pir||AD0974 probable exported protein STY4089 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504909|emb|CAD03288.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139730|gb|AAO71295.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 TIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|168235310|ref|ZP_02660368.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194735049|ref|YP_002116641.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194710551|gb|ACF89772.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197291430|gb|EDY30782.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|204928803|ref|ZP_03220002.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204322236|gb|EDZ07434.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322612872|gb|EFY09824.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618937|gb|EFY15824.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625286|gb|EFY22113.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322630047|gb|EFY26820.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634238|gb|EFY30973.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635861|gb|EFY32570.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643053|gb|EFY39629.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322643820|gb|EFY40369.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649830|gb|EFY46253.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653036|gb|EFY49371.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661145|gb|EFY57373.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662366|gb|EFY58579.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667244|gb|EFY63410.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674379|gb|EFY70472.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678413|gb|EFY74474.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680919|gb|EFY76953.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687145|gb|EFY83118.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192105|gb|EFZ77338.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198212|gb|EFZ83319.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200832|gb|EFZ85902.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206586|gb|EFZ91544.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210501|gb|EFZ95387.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216211|gb|EGA00939.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220434|gb|EGA04888.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225297|gb|EGA09531.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228411|gb|EGA12542.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234232|gb|EGA18320.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237217|gb|EGA21284.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244736|gb|EGA28740.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249217|gb|EGA33135.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250928|gb|EGA34804.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257323|gb|EGA41022.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262248|gb|EGA45809.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264541|gb|EGA48045.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268831|gb|EGA52289.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|168232551|ref|ZP_02657609.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194470628|ref|ZP_03076612.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456992|gb|EDX45831.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205333317|gb|EDZ20081.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|168464987|ref|ZP_02698879.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195632452|gb|EDX50936.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|168260540|ref|ZP_02682513.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350154|gb|EDZ36785.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|16766991|ref|NP_462606.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994326|ref|ZP_02575418.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168241884|ref|ZP_02666816.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194447310|ref|YP_002047737.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265013|ref|ZP_03165087.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|200387258|ref|ZP_03213870.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|16422273|gb|AAL22565.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194405614|gb|ACF65833.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197243268|gb|EDY25888.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|199604356|gb|EDZ02901.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205327801|gb|EDZ14565.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205338812|gb|EDZ25576.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|261248854|emb|CBG26707.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995965|gb|ACY90850.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160243|emb|CBW19765.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914732|dbj|BAJ38706.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226758|gb|EFX51808.1| putative divergent polysaccharide deacetylase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323132066|gb|ADX19496.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990555|gb|AEF09538.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|161616784|ref|YP_001590749.1| hypothetical protein SPAB_04603 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168818465|ref|ZP_02830465.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445745|ref|YP_002042956.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|198245856|ref|YP_002217668.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205354691|ref|YP_002228492.1| hypothetical protein SG3725 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858943|ref|YP_002245594.1| hypothetical protein SEN3528 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238910259|ref|ZP_04654096.1| hypothetical protein SentesTe_03869 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|161366148|gb|ABX69916.1| hypothetical protein SPAB_04603 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404408|gb|ACF64630.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|197940372|gb|ACH77705.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205274472|emb|CAR39505.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205344542|gb|EDZ31306.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|206710746|emb|CAR35107.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320088125|emb|CBY97887.1| Uncharacterized protein yibQ Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326625452|gb|EGE31797.1| Uncharacterized protein yibQ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326629830|gb|EGE36173.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|56415596|ref|YP_152671.1| hypothetical protein SPA3558 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364523|ref|YP_002144160.1| hypothetical protein SSPA3321 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129853|gb|AAV79359.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096000|emb|CAR61587.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 320
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|332982318|ref|YP_004463759.1| hypothetical protein Mahau_1756 [Mahella australiensis 50-1 BON]
gi|332699996|gb|AEE96937.1| protein of unknown function DUF610 YibQ [Mahella australiensis 50-1
BON]
Length = 267
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
IAI++ G + GT+ + L +P +T A N + A G E I+ PMQ
Sbjct: 41 IAIIIDDFGNNGDGTKEMLELSIP--LTAAVMPNLPYTEHDANMAHDAGLEVIMHTPMQP 98
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + + ++ R+ L + G+ N+ G+ +K + + +
Sbjct: 99 INGKPSWLGPKGITTDLPDDEIKARINEGLEQIKWAIGMNNHMGSKATQDKRVMKSVLEI 158
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+R + F D + ++ +A LN+P + D++LD+ ++ I+++L+ L IA
Sbjct: 159 AKQRNMFFVDSKVTANSVIDEVASSLNVPCVSRDIFLDNSKNQHDIQKQLEKLGNIAVEK 218
Query: 352 GQAIGVAVAFDESIEVISQWLQQE 375
G AIG+ E V ++ ++ E
Sbjct: 219 GYAIGIGHVGPEGGVVTAKAIRTE 242
>gi|290477275|ref|YP_003470196.1| hypothetical protein XBJ1_4335 [Xenorhabdus bovienii SS-2004]
gi|289176629|emb|CBJ83438.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 335
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F NA AR+AIV+ G + + I +P +++A + ++A K+G+E
Sbjct: 28 FTLNAHAARLAIVIDDFGY-RVHHENKILQMPTAVSIAILPDSPHGREMAQKAHKQGREI 86
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E + TL + + +++ + ++++ G+ N+ G+ + S+
Sbjct: 87 LIHLPMAPLSKQPLEKN--TLHPSMSREEIGRIIHDAIQKVPHAMGMNNHMGSAMTSSLN 144
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVA--DLYLDDQVDRDKIREKL 341
E + + + L+F D S T+V + P V ++LD+ + R +L
Sbjct: 145 GMENVMQVLSSYHHLYFLD-SVTIGKTQVTKAAMGTPVQVLRRHVFLDNVQTEAETRHQL 203
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+AR G AI + + ++ + Q L
Sbjct: 204 NRAIALARKQGSAIAIGHPYPTTVRALQQAL 234
>gi|313501034|gb|ADR62400.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 255
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+ A+ A ++I++ LG S R + L P +T+A + + ++A K G+ I
Sbjct: 18 AAPANKAYMSIIIDDLGQSAERDNRTLAL-PGPVTMAIMPDTPHATDFARQAHKAGKTVI 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM Y L +L RL +L + G+ N+ G+ + + ++
Sbjct: 77 LHMPMDPATGPYAWHPEVPLT------ELARRLDTALAKVPYAAGINNHMGSRMTAQRQP 130
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ E +R L F D +S + A L ++ D++LDD + I +L
Sbjct: 131 MAWLMGELQQRHLFFVDSRTSAATVAAAEAQAQGLAHVSRDVFLDDVRTTEAITRQLHQG 190
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWL 372
+A G + + + +++EV+ + L
Sbjct: 191 IALASKQGSVVLIGHPYPQTLEVLEREL 218
>gi|303252828|ref|ZP_07338987.1| hypothetical protein APP2_1780 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648258|gb|EFL78455.1| hypothetical protein APP2_1780 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 264
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ +G +T AI LP +++A ++A ++ ++ ++ +
Sbjct: 8 AQAGKLAIVIDDIGY-RTKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDVLIHL 66
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMNYRGAMLLSNKESAE 286
PMQ + + +S L V + ++ + RL + R Y G+ N+ G+ +++++ E
Sbjct: 67 PMQPKNR-HQPIESGALMVGAS-KENVARLIQAARNQVPYAIGLNNHMGSGATADRQTME 124
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E +K+ L F D + P +V A +L + + +L+LDD +++ +
Sbjct: 125 HLMTELSKQQLFFLDSKTGPSVAAKV-ARELGVNALERNLFLDDNDALHEVQNQFHLALH 183
Query: 347 IARTTGQAIGVAVAFDESIEVISQWL 372
AR G AI + SIEV+ + L
Sbjct: 184 YARKHGSAILIGHPRKNSIEVLEKGL 209
>gi|152974861|ref|YP_001374378.1| protein of unknown function DUF610 YibQ [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023613|gb|ABS21383.1| protein of unknown function DUF610 YibQ [Bacillus cytotoxicus NVH
391-98]
Length = 256
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+A ++AIV+ G + GT+ ++L P +T+A S + A KKG E I+
Sbjct: 24 HAHTNKVAIVIDDFGNNMKGTKEMLSL-PIPLTVAVMPFLPSTKQDAIAAHKKGHEVIIH 82
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM+ + + + ++ +R+ ++ G+ N+ G+ + +++
Sbjct: 83 MPMEPINGKKEWLGPKAITTDLSDDEIKHRIEQAIEAVPYAIGMNNHMGSKVTADERIMR 142
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I K GL + D ++ ++ + +L++P + ++ DD I ++ + L +
Sbjct: 143 IILTVCKKHGLFYLDSKTNSNSVVSRIGKELDVPIIENQMFFDDIYTSSHILKQAQFLLQ 202
Query: 347 IARTTGQAIGVA 358
R T + +
Sbjct: 203 KTRKTPVVVAIG 214
>gi|238783976|ref|ZP_04627992.1| hypothetical protein yberc0001_4960 [Yersinia bercovieri ATCC
43970]
gi|238715084|gb|EEQ07080.1| hypothetical protein yberc0001_4960 [Yersinia bercovieri ATCC
43970]
Length = 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + + P I++A N +A +G+E ++ +
Sbjct: 21 AQAGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAREMAVKAHNQGREILIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYAKGMNNHMGSAMTSSLPGMQR 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D + + A + + ++LDD + IR++ E+
Sbjct: 138 VMQALEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNRAVEL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQ 374
AR G AI + +I+V+ Q L Q
Sbjct: 198 ARRNGSAIAIGHPHPATIKVLQQMLPQ 224
>gi|238798823|ref|ZP_04642292.1| hypothetical protein ymoll0001_38940 [Yersinia mollaretii ATCC
43969]
gi|238717331|gb|EEQ09178.1| hypothetical protein ymoll0001_38940 [Yersinia mollaretii ATCC
43969]
Length = 352
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + + + P I++A N +A +G+E
Sbjct: 17 IANAAQAGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAREMAVKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVSNVPYAKGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQALEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
E+AR G AI + +I+V+ Q L Q
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQ 224
>gi|253690446|ref|YP_003019636.1| hypothetical protein PC1_4085 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251757024|gb|ACT15100.1| protein of unknown function DUF610 YibQ [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 315
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G + + I +P I++A N +A ++G+E ++ +PM
Sbjct: 25 KLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHLPMAP 83
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + ++ +R S+ G+ N+ G+ + ++ + + +
Sbjct: 84 MSKQPLERD--TLRPDMSSDEIQRIIRQSVNNVPHAVGLNNHMGSAMTASLPGMQKVMQA 141
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+ L F D + + + A + + ++LDD + +IR++ +IAR +
Sbjct: 142 LSAYQLYFLDSMTIGSSQSSQAAAGTGVKVIKRKVFLDDSQNEAEIRKQFTRAVQIARRS 201
Query: 352 GQAIGVAVAFDESIEVISQWL 372
G AI + +I V+ Q L
Sbjct: 202 GSAIAIGHPHPSTIRVLQQML 222
>gi|319652983|ref|ZP_08007088.1| hypothetical protein HMPREF1013_03703 [Bacillus sp. 2_A_57_CT2]
gi|317395332|gb|EFV76065.1| hypothetical protein HMPREF1013_03703 [Bacillus sp. 2_A_57_CT2]
Length = 257
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+AIV+ LG + GT + L P +T+A + + A + G E I+ +PM+
Sbjct: 29 ELAIVIDDLGNNMKGTAEMMEL-PVTLTVAIMPFMPTTKEDAELASENGHEVIVHMPMEP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + T +++ +R+ +++ G+ ++ G+ N+ ++ K
Sbjct: 88 KRGKRSWLGPGAITTDLTDEEIRSRVESAIKEVPHAVGMNHHMGSRATENERVMRIVLKV 147
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD-------QVDRDKIREKLKGL 344
+ GL + D ++ +++ LA ++ +PY+ +++ DD D++ EKL
Sbjct: 148 CKEHGLFYLDSKTTGKSVVGKLAKEIGVPYVENNIFFDDIYTTAHITKQADRLAEKLVKN 207
Query: 345 EEIARTTGQAIG-VAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E I AIG V + + + V+ +++ + +VPLS L
Sbjct: 208 ERII-----AIGHVGITGTKMVNVLKEYIPV-YKEKAEIVPLSEL 246
>gi|261823559|ref|YP_003261665.1| hypothetical protein Pecwa_4366 [Pectobacterium wasabiae WPP163]
gi|261607572|gb|ACX90058.1| protein of unknown function DUF610 YibQ [Pectobacterium wasabiae
WPP163]
Length = 313
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + I +P I++A N +A ++G+E ++ +
Sbjct: 21 ALAGKLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + ++ +R S+ G+ N+ G+ + ++ +
Sbjct: 80 PMAPMSKQPLERD--TLRPDMSSDEIQRIIRQSVNNVPYAVGLNNHMGSAMTASLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + + L F D + + + A + + ++LDD + +IR++ +I
Sbjct: 138 VMQALSAYQLYFLDSMTIGSSQSSQAAAGTGVKVIKRKVFLDDSQNEAEIRKQFARAVQI 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWL 372
AR +G AI + +I V+ Q L
Sbjct: 198 ARRSGSAIAIGHPHPSTIRVLQQML 222
>gi|156936214|ref|YP_001440130.1| hypothetical protein ESA_04113 [Cronobacter sakazakii ATCC BAA-894]
gi|156534468|gb|ABU79294.1| hypothetical protein ESA_04113 [Cronobacter sakazakii ATCC BAA-894]
Length = 313
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 82/198 (41%), Gaps = 3/198 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
IV+ G + GT+ + +PA +++A N +A +G + ++ +PM +
Sbjct: 28 IVIDDFGY-RPGTENQVLAMPAEVSVAVLPNAPHAREMATKAHNQGHDVLIHLPMAPLSK 86
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
E D TL+ + ++ +R ++ G+ N+ G+ + S+ + + A
Sbjct: 87 QPLEKD--TLRPDMSADEIARIIREAVNSVPYAIGMNNHMGSAMTSSLPGMQKVMASLAH 144
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
L F D + + A + + ++LDD + IR + +AR G A
Sbjct: 145 YNLFFLDSMTIGNSQAMRAAAGTGVKVIKRKVFLDDTQNDADIRYQFNRAVALARRNGSA 204
Query: 355 IGVAVAFDESIEVISQWL 372
I + ++ V+ Q L
Sbjct: 205 IAIGHPHPSTVRVLQQML 222
>gi|46143439|ref|ZP_00204471.1| COG2861: Uncharacterized protein conserved in bacteria
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208306|ref|YP_001053531.1| hypothetical protein APL_0830 [Actinobacillus pleuropneumoniae L20]
gi|307247817|ref|ZP_07529853.1| hypothetical protein appser2_8060 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250063|ref|ZP_07532027.1| hypothetical protein appser4_8510 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307256881|ref|ZP_07538659.1| hypothetical protein appser10_8850 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307261313|ref|ZP_07542988.1| hypothetical protein appser12_8790 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126097098|gb|ABN73926.1| hypothetical protein APL_0830 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306855619|gb|EFM87786.1| hypothetical protein appser2_8060 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857923|gb|EFM90015.1| hypothetical protein appser4_8510 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306864615|gb|EFM96520.1| hypothetical protein appser10_8850 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869044|gb|EFN00846.1| hypothetical protein appser12_8790 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 282
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ +G +T AI LP +++A ++A ++ ++ ++ +
Sbjct: 26 AQAGKLAIVIDDIGY-RTKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDVLIHL 84
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMNYRGAMLLSNKESAE 286
PMQ + +S L V + ++ + RL + R Y G+ N+ G+ +++++ E
Sbjct: 85 PMQP-KNRHQPIESGALMVGAS-KENVARLIQAARNQVPYAIGLNNHMGSGATADRQTME 142
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E +K+ L F D + P +V A +L + + +L+LDD +++ +
Sbjct: 143 HLMTELSKQQLFFLDSKTGPSVAAKV-ARELGVNALERNLFLDDNDALHEVQNQFHLALH 201
Query: 347 IARTTGQAIGVAVAFDESIEVISQWL 372
AR G AI + SIEV+ + L
Sbjct: 202 YARKHGSAILIGHPRKNSIEVLEKGL 227
>gi|167549047|ref|ZP_02342806.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205325644|gb|EDZ13483.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 320
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ I LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQILALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G I + ++ V+ Q
Sbjct: 194 AIELARRNGSTIAIGHPHPATVRVLQQ 220
>gi|161505759|ref|YP_001572871.1| hypothetical protein SARI_03935 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867106|gb|ABX23729.1| hypothetical protein SARI_03935 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 320
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP +I++A N +A G E
Sbjct: 17 FAQPVFAGKLAIVIDDFGY-RPHTENQVLALPPDISVAVLPNAPQAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R +++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPEMSSDEIDRIIREAVKNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+AR G AI + ++ V+ Q
Sbjct: 194 AIELARRNGSAIAIGHPHPATVRVLQQ 220
>gi|117918507|ref|YP_867699.1| hypothetical protein Shewana3_0048 [Shewanella sp. ANA-3]
gi|117610839|gb|ABK46293.1| protein of unknown function DUF610, YibQ [Shewanella sp. ANA-3]
Length = 251
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
++ A+IA+++ +G T A+ LP+ +TL+ + ++ K A KG E +L +
Sbjct: 17 SNAAQIALIIDDIGYRHT--DEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHEIMLHL 74
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQA + T +++ Q+ + + ++ G N+ G++L +
Sbjct: 75 PMQALNGKALGVGGLTNNMSEA--QIRSSVLAAIASVPFAKGANNHMGSLLTQLDDPMLW 132
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ ++ L F D ++ A L +P + L+LD+ V + ++ +
Sbjct: 133 VMDTLKQKQLYFVDSMTTKFTKAGDKADSLGVPLLRRKLFLDNDVSAAALEKQFNLMISQ 192
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A + G + +A + E+I + L + + +VP S L
Sbjct: 193 AHSQGSLVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSL 233
>gi|332289073|ref|YP_004419925.1| Divergent polysaccharide deacetylase [Gallibacterium anatis UMN179]
gi|330431969|gb|AEC17028.1| Divergent polysaccharide deacetylase [Gallibacterium anatis UMN179]
Length = 273
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+ A++AIV+ +G + AI LP + +A + + K+A ++G++A++ +P
Sbjct: 20 NAAQLAIVIDDIGY-RAHEDNAIFALPLAVNVAIIPSAPYAQQRAKQAHQQGRDALIHMP 78
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQ E + L +T Q+ +R+ + G+ N+ G+ S+ ++
Sbjct: 79 MQPKSNIKLEANGLVLGLTPA--QVSHRIDLAQNIVPNAIGMNNHMGSAATSDSGLMHIL 136
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
++ A+RGL F D + ++ +A + + + +++LDD + I+++ + + A
Sbjct: 137 MQQLAQRGLSFLDSKTIGSSVAGKIAKQYGVSALERNIFLDDNNEYANIQQQFQQAIQYA 196
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R AI + +I V+ Q L Q D+ +V +S L
Sbjct: 197 RKHQTAIVIGHPRKNTIAVLQQQLSQLPA-DIELVKISRL 235
>gi|283850893|ref|ZP_06368179.1| protein of unknown function DUF610 YibQ [Desulfovibrio sp. FW1012B]
gi|283573816|gb|EFC21790.1| protein of unknown function DUF610 YibQ [Desulfovibrio sp. FW1012B]
Length = 378
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 2/220 (0%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
G R+ +V+ +G R + LP +TLA N +A + G E IL PM
Sbjct: 158 GPRMVVVIDDIG-DHPVMARNLMELPIPVTLAILPNRPRTRSIAAQAAEHGLEIILHQPM 216
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q L +++ L +L + G+ N+ G+ S+ +
Sbjct: 217 QPGSYPRVNPGPGALFPDMDEKRIQATLTDNLSQLPHVVGINNHMGSAFTSDGPGMAAVM 276
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+GL F D +S + A + +P+ ++LD+ + I +LK E A
Sbjct: 277 PILKAKGLFFMDSVTSATSAAPEAARRAGVPFYRRAVFLDNVRNTRTILGQLKTAERHAL 336
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G+AI + + E+ E + W ++ R +++V L+ L
Sbjct: 337 KHGRAIAIGHPYGETYEALKIWAKERDPR-IALVTLTELG 375
>gi|238897058|ref|YP_002921804.1| hypothetical protein KP1_5309 [Klebsiella pneumoniae NTUH-K2044]
gi|262040666|ref|ZP_06013904.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|238549386|dbj|BAH65737.1| hypothetical protein KP1_5309 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259042030|gb|EEW43063.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 315
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + T+ + LPA I++A N +A +G E
Sbjct: 17 LAAPAFAGKLSIVIDDFGY-RPQTENQVLALPATISVAVLPNAPHAREMATKAHNQGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRNQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
+AR G AI + ++ V+ Q
Sbjct: 194 AIALARRNGSAIAIGHPHPTTVRVLQQ 220
>gi|238789568|ref|ZP_04633352.1| hypothetical protein yfred0001_24040 [Yersinia frederiksenii ATCC
33641]
gi|238722321|gb|EEQ13977.1| hypothetical protein yfred0001_24040 [Yersinia frederiksenii ATCC
33641]
Length = 337
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 3/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + + P I++A N +A +G+E ++ +
Sbjct: 21 AQAGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAKEMAVKAHNQGREILIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D + + A + + ++LDD + IR++ ++
Sbjct: 138 VMQTLEHYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNRAVDL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G AI + +I+V+ Q L Q V V P + L
Sbjct: 198 ARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALL 238
>gi|50119129|ref|YP_048296.1| hypothetical protein ECA0169 [Pectobacterium atrosepticum SCRI1043]
gi|49609655|emb|CAG73088.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
Length = 315
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + I +P I++A N +A ++G+E ++ +
Sbjct: 21 ALAGKLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D+ ++ QL+ +R S+ G+ N+ G+ + ++ +
Sbjct: 80 PMAPMSKQPLERDTLRPDMSSDEIQLI--IRQSVSNVPYAVGLNNHMGSAMTASLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + + L F D + + + A + + ++LDD + +IR++ +I
Sbjct: 138 VMQALSAYQLYFLDSMTIGSSQSSQAAAGTGVKVIKRKVFLDDSQNEAEIRKQFTRAVQI 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWL 372
AR +G AI + +I V+ Q L
Sbjct: 198 ARRSGSAIAIGHPHPSTIRVLQQML 222
>gi|332159700|ref|YP_004296277.1| hypothetical protein YE105_C0076 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325663930|gb|ADZ40574.1| hypothetical protein YE105_C0076 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861126|emb|CBX71390.1| uncharacterized protein yibQ [Yersinia enterocolitica W22703]
Length = 334
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+++IV+ G + + + P I++A N +A +G+E ++ +PM
Sbjct: 23 AGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAKEMAIKAHNQGREILIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + + +++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 82 APLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLPGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ L F D + + A + + ++LDD + IR++ E+AR
Sbjct: 140 QTLEHYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNRAVELAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQ 374
G AI + +I+V+ Q L Q
Sbjct: 200 RNGSAIAIGHPHPATIKVLQQMLPQ 224
>gi|150392120|ref|YP_001322169.1| protein of unknown function DUF610, YibQ [Alkaliphilus
metalliredigens QYMF]
gi|149951982|gb|ABR50510.1| protein of unknown function DUF610, YibQ [Alkaliphilus
metalliredigens QYMF]
Length = 286
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 19/227 (8%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ-- 230
+AIV+ G + +GT +N++ +T A K A K G E I+ IPM+
Sbjct: 62 VAIVIDDFGNNGSGTDEMMNIIQP-LTFAVIPFLPYSQEEAKRANKAGHEVIVHIPMEPK 120
Query: 231 AFDESYNEDDSYTLKVTQ-----TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+ + D T +T V + + ++Y++ G N+ G+ + +K
Sbjct: 121 KGNPKWLGDRGITSNLTSEEVHSIVLEAIEDVQYAV-------GANNHMGSKITEDKRIM 173
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
E + + + D +S ++ + +A + N+P + ++LD++ + + I+ +++ L
Sbjct: 174 EAVMQVLKANDMYMIDSKTSQTSIVKEVADQYNVPVLERAIFLDNEKNVEAIKRQIEKLA 233
Query: 346 EIARTTGQAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCL 388
+A +G A+ + E + E I Q L + + ++P S L
Sbjct: 234 VVALESGSAVAIGHVGPEGGRITAEAIKQMLPYLQEKGIEIMPASKL 280
>gi|238764340|ref|ZP_04625291.1| hypothetical protein ykris0001_18390 [Yersinia kristensenii ATCC
33638]
gi|238697491|gb|EEP90257.1| hypothetical protein ykris0001_18390 [Yersinia kristensenii ATCC
33638]
Length = 336
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 3/219 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+++IV+ G + + + P I++A N +A +G+E ++ +PM
Sbjct: 23 AGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAKEMAIKAHNQGREILIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + + +++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 82 APLSKQPLERD--TLQPSMSSEEVQRIIRQAVSNVPYATGMNNHMGSAMTSSFPGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ L F D + + A + + ++LDD + IR++ E+AR
Sbjct: 140 QALEHYQLYFLDSMTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNRAVELAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G AI + +I+V+ Q L Q V V P + L
Sbjct: 200 RNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALL 238
>gi|300721222|ref|YP_003710492.1| hypothetical protein XNC1_0147 [Xenorhabdus nematophila ATCC 19061]
gi|297627709|emb|CBJ88235.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus nematophila ATCC 19061]
Length = 349
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+F NA AR+AIV+ +G + + I +P +++A + +A ++G+E
Sbjct: 29 SFTLNARAARLAIVIDDVGY-RIHEENKILQMPIAVSVAILPDSPHGREMAVKAYQQGRE 87
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E + TL + +++ ++ ++++ G+ N+ G+ + S+
Sbjct: 88 VLIHLPMAPLSQQPLEKN--TLHPAMSREEIGRIIQEAIQKVPHAVGMNNHMGSAMTSDL 145
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + + ++ L F D + A ++P + +++LD+ + R +
Sbjct: 146 TGMEKVMQVLSRHHLYFLDSVTIGNTQVTKAATGTSVPVIRRNIFLDNVQTEAETRHQFN 205
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+AR G AI + ++ + Q L
Sbjct: 206 RAITLARKKGSAIAIGHPHPTTVRALQQAL 235
>gi|113461585|ref|YP_719654.1| hypothetical protein HS_1442 [Haemophilus somnus 129PT]
gi|112823628|gb|ABI25717.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 270
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + I LP +++A + + ++AK++ ++ ++ +PMQ
Sbjct: 17 KLAIVIDDIG-YRLKEDNQIYSLPKEVSVAIIPSAPHAKQRDQQAKQQDRDILIHLPMQP 75
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ ED L ++Q ++ +R+R + G+ N+ G+ ++K+ +
Sbjct: 76 LNLQKIEDGGIKLGMSQP--EVYHRVRNAKSILPNAIGMNNHMGSAATADKDLMNKLMTA 133
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + R++ +A + +P + ++LDD ++ + + AR
Sbjct: 134 LLQQDLFFLDSRTIGRSVAGKIAREFGIPTLERHIFLDDSDKLSDVQRQWNAAIQYARKR 193
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ ++Q +D+ +V + L +
Sbjct: 194 GTAIVIGHPRKNTIAVLQMGIKQL-PKDIQLVGIGSLWR 231
>gi|228984507|ref|ZP_04144684.1| hypothetical protein bthur0001_12120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775210|gb|EEM23599.1| hypothetical protein bthur0001_12120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 215
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
GT + ++L P +T+A S A KKG E I+ +PM+ +
Sbjct: 3 GTDKMLSL-PIPLTVAVMPFLPSTKEDAIAAHKKGHEVIIHMPMEPIKGKKEWLGPKAIT 61
Query: 246 VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS 305
+ +++ NRL +++ G+ N+ G+ + +++ +I K GL + D ++
Sbjct: 62 TDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSKTN 121
Query: 306 PRNLTRVLAPKLNLPYMVADLYLDD 330
P+++ + +L +P + L+ DD
Sbjct: 122 PKSVVPKIGKELGVPIIENQLFFDD 146
>gi|239995835|ref|ZP_04716359.1| hypothetical protein AmacA2_15321 [Alteromonas macleodii ATCC
27126]
Length = 302
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 78/179 (43%), Gaps = 2/179 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LP IT + A+++G+ +L +PMQA +S + L +
Sbjct: 47 LPKEITFSILPQTPLASEIALRAEQEGRAVMLHMPMQA--QSGKDMGPLGLTTDMFAGAI 104
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
LR +++ GV N+ G+ ++ E + KE ++GL F D ++ +
Sbjct: 105 TYNLRKAMKSVPNAVGVNNHMGSAFTGQQKGMEALLKEVKRQGLFFVDSRTTVLTKGEEI 164
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
A +L +P ++LD +++ + ++ ++ IA+ G + + E+++ + +
Sbjct: 165 AQRLGVPSASRQVFLDHKLEPAFLLKQFNHMKRIAKKNGHVVVIGHPHPETVDFLKTHI 223
>gi|37528651|ref|NP_931996.1| hypothetical protein plu4842 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36788090|emb|CAE17214.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 271
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
AR+AIV+ G + + + P I++A + ++A K+G+E ++ +PM
Sbjct: 29 AARLAIVIDDFGYRPHNENKILQM-PVAISIAILPDSPHGREMAEKAYKQGREILIHLPM 87
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ T + + + ++ ++++ G+ N+ G+ + S+ + +
Sbjct: 88 APLSKQLLEPD--TLQPTMSSEDIDRIIQRAIQKVPYAVGINNHMGSAMTSSLPGMQKVM 145
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + +++LDD + R +L IAR
Sbjct: 146 RSLSGYNLYFLDSVTIGNTQATKAAQGTPVRVIRRNVFLDDVQSEAETRHQLNRAISIAR 205
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G AI + +I + Q L
Sbjct: 206 KNGSAIAIGHPHSTTIRALQQML 228
>gi|238750811|ref|ZP_04612309.1| hypothetical protein yrohd0001_10680 [Yersinia rohdei ATCC 43380]
gi|238710955|gb|EEQ03175.1| hypothetical protein yrohd0001_10680 [Yersinia rohdei ATCC 43380]
Length = 341
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + + P I++A N +A +G+E ++ +
Sbjct: 21 AQAGKLSIVIDDFGYRPQNENKILQM-PLPISVAILPNAPYAREMAVKAHNQGREILIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D + + A + + ++LDD + IR++ E+
Sbjct: 138 VMQVLEHYQLYFLDSVTIGNSQASNAAQGTGVKVIKRKVFLDDSQNEAAIRQQFTRAVEL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQ 374
AR G AI + +I+V+ Q L Q
Sbjct: 198 ARRNGSAIAIGHPHPSTIKVLQQMLPQ 224
>gi|167945841|ref|ZP_02532915.1| hypothetical protein Epers_04577 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 240
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 188 QRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247
+RA+ L +T +F + + +A + +E +L +PM++ + + + L
Sbjct: 13 ERALALR-GKVTYSFLPHTPYARQQADQAYRLEREVMLHLPMESLEALPLGEGA--LLTG 69
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPR 307
T Q+ L ++ G+ N+ G+M+ ++ + + GL F D ++ +
Sbjct: 70 MTSQEQAEVLAAAVSSVPHLAGINNHMGSMMTADGVAMQQFMALIRDTGLFFLDSRTTDK 129
Query: 308 NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV 367
L A + + D++LD+ + IR + K L +AR+ G AIG+A E++EV
Sbjct: 130 TLAEQSAQENLVATGRRDVFLDNLRQPEAIRAQFKRLLALARSQGHAIGIAHPHPETLEV 189
Query: 368 ISQWLQQEHVRDVSVVPLSCL 388
+ L + + + +VP+S L
Sbjct: 190 LEALLPELEQQGIRLVPVSQL 210
>gi|157373053|ref|YP_001481042.1| hypothetical protein Spro_4821 [Serratia proteamaculans 568]
gi|157324817|gb|ABV43914.1| protein of unknown function DUF610 YibQ [Serratia proteamaculans
568]
Length = 318
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
C+ +G +++IV+ +G + + A+ +P I++A N A +G+E
Sbjct: 18 VCAAQAG-KLSIVIDDVGY-RPHEEGAVLQMPTAISVAVLPNAPHAHLMATRAHSQGREV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHMPMAPLSKQPLERD--TLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + + A ++ + ++LDD + IR +
Sbjct: 134 AMQKVMQALDSYQLYFLDSMTIGNSQATRAAAGTHVKVIKRKVFLDDTANEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
E+AR G AI + ++ V+ Q L
Sbjct: 194 AVELARRNGSAIAIGHPRPATVRVLQQML 222
>gi|307718431|ref|YP_003873963.1| hypothetical protein STHERM_c07330 [Spirochaeta thermophila DSM
6192]
gi|306532156|gb|ADN01690.1| hypothetical protein STHERM_c07330 [Spirochaeta thermophila DSM
6192]
Length = 271
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
+ ++ G+ L +PM+ E + L V+ + ++ + + L G GV N+
Sbjct: 94 RRVREAGKTLFLHLPMEP--EGNEDPGPGALYVSMSRAEIEHVIAEDLASVPGVQGVNNH 151
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ + E I A GLLF D ++P ++ R A +L +P M D++LD++
Sbjct: 152 MGSRFTKDPLRMEWILSILAAGGLLFVDSRTTPESVVRETAFRLGVPVMERDVFLDNEQT 211
Query: 334 RDKIREKLKGLEEIARTTGQAIGVA 358
+ + +IAR G+A+ +
Sbjct: 212 AVYVEQAFMHAVQIARRRGRAVAIG 236
>gi|307721625|ref|YP_003892765.1| hypothetical protein Saut_1709 [Sulfurimonas autotrophica DSM
16294]
gi|306979718|gb|ADN09753.1| protein of unknown function DUF610 YibQ [Sulfurimonas autotrophica
DSM 16294]
Length = 328
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 33/228 (14%)
Query: 169 SGARIAIVVSGLGISQTGTQ-RAINLLPANITLAF----ASNGNSLDRWMKEAKKKGQEA 223
S ++AI++ + QT +Q RA+ L N+T++F A+ NS AK E
Sbjct: 115 SKPKLAIIIDDM---QTTSQVRAVKSLHLNVTMSFLPPRAARPNS-------AKLASHEK 164
Query: 224 --ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLR--YSLRRGTGYFGVMNYRGAMLL 279
++ +PM+A ++ ++ +TL++ + Q++ +++ L GY N+ G+
Sbjct: 165 FYMVHLPMEAMH--FSAEEPHTLRIYDSQQKISAKIKDIKKLFPKVGYIN--NHTGSKFT 220
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL----NLPYMVADLYLDDQVDRD 335
+N+ + + + F D R + +APK+ L Y+ D++LD +D+
Sbjct: 221 ANEVAMNRLIFALNTNHIHFIDS----RTTAKTMAPKVLKNFGLKYVSRDVFLDHHMDKP 276
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
I +++K +A++ G AI + +++ + + ++ +DV +V
Sbjct: 277 YILKQIKKAIAVAKSHGSAIAIGHPHKNTLQAL--YESKDLFKDVELV 322
>gi|85858725|ref|YP_460927.1| polysaccharide deacetylase [Syntrophus aciditrophicus SB]
gi|85721816|gb|ABC76759.1| polysaccharide deacetylase [Syntrophus aciditrophicus SB]
Length = 334
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA---KKKGQEAIL 225
SG RIAI++ +G + + NLL ++FA + + R A K G++ +L
Sbjct: 113 SGLRIAILIDDIGADLSPVK---NLLKIEAPISFAVLPH-MPRGAAAADMIHKAGRDVLL 168
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + L T +L L +L GV N+ G++ ++E
Sbjct: 169 HLPMEPRSYPKEKPGPGALLTTMDDSELRKVLTGNLDAVPHISGVNNHMGSLFTEDEEKL 228
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ E KRGL F D ++P + ++ + +P+ +++D+ D K
Sbjct: 229 AIVMAELEKRGLFFIDSRTTPYSKAAKVSQDIGIPFASRRIFIDNGQDYTK 279
>gi|284008837|emb|CBA75621.1| exported polysaccharide deacetylase [Arsenophonus nasoniae]
Length = 319
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+ +++AIV+ +G + + I LP I++A + ++A ++G+E ++ +P
Sbjct: 21 NASKLAIVIDDIGYRKKEDNQ-ILALPVAISIAILPDSPYGREMAEKANQQGREILIHMP 79
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ + E ++ T +++ + ++ ++ ++++ G+ N+ G+ + +N + + +
Sbjct: 80 MKPISQQPLEKNTLTPQMSAS--EIEQKIIAAIKQVPHAKGMNNHMGSAMTANLVAMKNV 137
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ L F D + A LP + +++LDD +IR++ A
Sbjct: 138 MHVLSHYDLYFLDSVTIANTKVNEAAKFFALPTLRRNVFLDDVKTEAQIRKQFAHAISFA 197
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
R G +I + + +I+V+ Q L E D+ +V +S L
Sbjct: 198 RKQGSSIVIGHPYPATIQVLHQTL-FELPSDIELVAVSKL 236
>gi|120600823|ref|YP_965397.1| hypothetical protein Sputw3181_4041 [Shewanella sp. W3-18-1]
gi|120560916|gb|ABM26843.1| protein of unknown function DUF610, YibQ [Shewanella sp. W3-18-1]
Length = 247
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + + A+IA+++ +G QT A+ LP +TL+ + + K KG E
Sbjct: 13 YVAPSYAAKIALIIDDIGYRQT--DEAVLSLPHTVTLSVLPHTPLGENLAKVGHSKGHEI 70
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF----GVMNYRGAMLL 279
+L +PMQA + T + + +R ++ G N+ G+ LL
Sbjct: 71 MLHLPMQAINGKALGPGGLTKGMDEA------EIRANVSSAIANIPFAKGANNHMGS-LL 123
Query: 280 SNKESAEVIFKEFAKRGLLFF-DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
+ +S + E K+ L+F D ++P + A +L +P + L+LD+ V + +
Sbjct: 124 TQLDSHMLWVMECLKQNQLYFVDSMTTPFSKAGEKADQLGIPSLKRQLFLDNNVSKKALE 183
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++ + A G + +A + E+I + L + +VP+S L
Sbjct: 184 KQFNLMISNAHMQGSLVVIAHPYPETIRFLQANLPLLEAEGIDLVPVSDL 233
>gi|47566220|ref|ZP_00237248.1| hypothetical protein exported protein [Bacillus cereus G9241]
gi|47556773|gb|EAL15104.1| hypothetical protein exported protein [Bacillus cereus G9241]
Length = 209
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LP +T+A S A KKG E I+ +PM+ + + +++
Sbjct: 4 LPIPLTVAVMPFLPSTKEDAIAAHKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEI 63
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
NRL +++ G+ N+ G+ + +++ +I K GL + D ++P+++ +
Sbjct: 64 NNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKI 123
Query: 314 APKLNLPYMVADLYLDD 330
+L +P + L+ DD
Sbjct: 124 GKELGVPIIENQLFFDD 140
>gi|312958445|ref|ZP_07772965.1| protein of unknown function DUF610 [Pseudomonas fluorescens WH6]
gi|311286988|gb|EFQ65549.1| protein of unknown function DUF610 [Pseudomonas fluorescens WH6]
Length = 257
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
R + LP +T A + + +EA K G+ IL +PM +
Sbjct: 45 RRVLALPGPVTTAIMPDTPHAAEFAREAHKAGKIVILHMPMD------PATGPFAWHPEL 98
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+V+ L RL + G+ N+ G+ + + + + E +R F D +S +
Sbjct: 99 SVEDLGKRLDAAFTAVPYTAGINNHMGSRMTAQPAAMAWLMAELQRRHKFFVDSRTSAQT 158
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ A K+ L + D++LDD+ I +L+ ++A G A+ + + +++ V+
Sbjct: 159 VAAAEAQKIGLASVSRDVFLDDERTEAAITTQLQTAIKLAHKQGSAVMIGHPYPQTLAVL 218
Query: 369 SQWL 372
+ L
Sbjct: 219 EREL 222
>gi|325474776|gb|EGC77962.1| hypothetical protein HMPREF9353_00809 [Treponema denticola F0402]
Length = 390
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
G+E IL PMQA + + N D +K +++ + ++ G+ N+ G+++
Sbjct: 219 GKELILHQPMQALNPNINPGDG-AVKPGMDREEIKKIVASNVEEIGPIAGMNNHEGSLIT 277
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
S++++ E + + ++ + F D +S +++ +A KLN+ ++LD++ D+ +++
Sbjct: 278 SDEKAMEAVLELCKEKNIYFLDSRTSSKSVVPQVAKKLNMNIWERAVFLDNKKDKAYMKK 337
Query: 340 K-LKGLEEIARTTGQAIGVAVAF 361
+ ++GL EIA G+AI + F
Sbjct: 338 QIIEGL-EIASQRGEAIMIGHVF 359
>gi|317051484|ref|YP_004112600.1| hypothetical protein Selin_1309 [Desulfurispirillum indicum S5]
gi|316946568|gb|ADU66044.1| protein of unknown function DUF610 YibQ [Desulfurispirillum indicum
S5]
Length = 426
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
ARIAI++ G + ++A+ + PA +TL+ + + G E +L PM+
Sbjct: 187 ARIAIILDDAGDNFQLAKQAVQIHPA-VTLSILPKRPFSREISQLLDRMGLEYMLHQPME 245
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
A + N + L T +++ + +L G G+ N+ G+ + + ++ +
Sbjct: 246 AQNPLINPGWA-ALLTTMDEEEIRSTFTAALESLPGVAGINNHMGSRFTQDPDRLRIVME 304
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
A+R L F D ++ + +A + + D+++D++ D + I +L L A+
Sbjct: 305 MIAERDLYFIDSYTTSDSQAYAVATEFQVSSGFRDVFIDNESDVEAILRQLDILVRDAQR 364
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
G AIG+ +IE + ++ + +V +V S + P+
Sbjct: 365 YGSAIGIGHVRSRTIEALEEFTGRLEEMNVELVTPSVIVSHRKPA 409
>gi|254447505|ref|ZP_05060971.1| polysaccharide deacetylase family protein [gamma proteobacterium
HTCC5015]
gi|198262848|gb|EDY87127.1| polysaccharide deacetylase family protein [gamma proteobacterium
HTCC5015]
Length = 270
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
AI++ +G + T + R I +P +T A + +R + +E +L +PMQ
Sbjct: 29 AIIIDDIGYN-TVSARRIAAMPWPLTCAVLPEAVASERAAQILADADKELMLHLPMQGRL 87
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
E + L + + L R G+ N++G++L + ++ + E +
Sbjct: 88 GEARE--PHVLNINMDRHHFRQEVLRQLDRFPRVVGINNHQGSVLTTRQQPMNWLMDELS 145
Query: 294 K-RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
D ++ +L + A LP D++LD Q + I ++ +A+ +G
Sbjct: 146 TIENFYVVDSRTASDSLLQASAQHYQLPNSTRDVFLDHQRNEAYIARQVLEFVRVAKASG 205
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AI + + E++ V+ + L V ++P+S L +
Sbjct: 206 SAIAIGHPYPETLNVLEKALPYFESEGVRLLPVSQLIR 243
>gi|251797981|ref|YP_003012712.1| hypothetical protein Pjdr2_3996 [Paenibacillus sp. JDR-2]
gi|247545607|gb|ACT02626.1| protein of unknown function DUF610 YibQ [Paenibacillus sp. JDR-2]
Length = 275
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S + AIV+ G GT+ + L PA T+A + + +EA + G + I+ +P
Sbjct: 39 SARQFAIVIDDFGNGMNGTEEMLQL-PAKFTVAIMPFMPTTKKDAEEAHRLGHDVIVHMP 97
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ N + + +++ R+ ++ G+ N+ G+ + +++ ++
Sbjct: 98 MEPNKGQKNWLGPGAITADLSDEEIKKRVEDAIDDVPYAVGMNNHMGSKITADERIMRIV 157
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+RGL F D ++ + + + +L +P + +++LDD
Sbjct: 158 LSVCKERGLFFLDSRTTFKTVVPKVTEELGVPALANNVFLDD 199
>gi|229065441|ref|ZP_04200691.1| hypothetical protein bcere0026_54560 [Bacillus cereus AH603]
gi|229132227|ref|ZP_04261084.1| hypothetical protein bcere0014_11660 [Bacillus cereus BDRD-ST196]
gi|228651275|gb|EEL07253.1| hypothetical protein bcere0014_11660 [Bacillus cereus BDRD-ST196]
gi|228715835|gb|EEL67605.1| hypothetical protein bcere0026_54560 [Bacillus cereus AH603]
Length = 215
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
GT + ++L P +T+A S + A KKG E I+ +PM+ +
Sbjct: 3 GTDKMLSL-PIPLTVAVMPFLPSTKQDAIAAHKKGHEVIIHMPMEPIRGKKEWLGPKAIT 61
Query: 246 VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS 305
+ +++ NRL +++ G+ N+ G+ + +++ +I K GL + D ++
Sbjct: 62 TDLSDEEINNRLEQAIQEIPHAIGMNNHMGSKVTADERIVRLILSACKKHGLFYLDSKTN 121
Query: 306 PRNLTRVLAPKLNLPYMVADLYLDD 330
P ++ + +L +P + L+ DD
Sbjct: 122 PNSVVPKIGKELGVPIIENQLFFDD 146
>gi|42528003|ref|NP_973101.1| hypothetical protein TDE2503 [Treponema denticola ATCC 35405]
gi|41819048|gb|AAS13020.1| conserved domain protein [Treponema denticola ATCC 35405]
Length = 390
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
G+E IL PMQA + + N D +K +++ + ++ G+ N+ G+++
Sbjct: 219 GKELILHQPMQALNPNINPGDG-AVKPGMDREEIKKIVASNVEEIGPIAGMNNHEGSLIT 277
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
S++++ E + + ++ + F D +S +++ +A KLN+ ++LD++ D+ +++
Sbjct: 278 SDEKAMEAVLELCREKNIYFLDSRTSSKSVVPQVAKKLNMNIWERAVFLDNKKDKAYMKK 337
Query: 340 K-LKGLEEIARTTGQAIGVAVAF 361
+ ++GL EIA G+AI + F
Sbjct: 338 QIIEGL-EIASQRGEAIMIGHVF 359
>gi|329296461|ref|ZP_08253797.1| hypothetical protein Pstas_07378 [Plautia stali symbiont]
Length = 301
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 13/214 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++AIV+ G + + + PA I++A N +A + G E
Sbjct: 16 FTFAAHAGKLAIVIDDFGYHPAEENKVLQM-PAAISVAVLPNAPHARDMATKAHQGGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLK-----VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
++ +PM + E D+ T K + + V+ N++ Y++ G+ N+ G+ +
Sbjct: 75 LIHLPMAPLSKQPLEKDTLTPKMSSEEIARIVRDASNKVPYAV-------GLNNHMGSKM 127
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
S+ + + + F D + + + A + + ++LDD + IR
Sbjct: 128 TSSLPGMQKVMQVLNHYNYYFLDSMTIGNSQSVPAAQGTQVKVLKRRVFLDDSQNESAIR 187
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+ ++A+ G AI + ++ V+ Q L
Sbjct: 188 TQFTRAVKLAQRDGYAISIGHPHPTTVRVLQQML 221
>gi|146291148|ref|YP_001181572.1| hypothetical protein Sputcn32_0037 [Shewanella putrefaciens CN-32]
gi|145562838|gb|ABP73773.1| protein of unknown function DUF610, YibQ [Shewanella putrefaciens
CN-32]
gi|319428503|gb|ADV56577.1| protein of unknown function DUF610 YibQ [Shewanella putrefaciens
200]
Length = 247
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + + +IA+++ +G QT A+ LP +TL+ + + K +KG E
Sbjct: 13 YVAPSYATKIALIIDDIGYRQT--DEAVLSLPHTVTLSVLPHTPLGENLAKVGHRKGHEI 70
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF----GVMNYRGAMLL 279
+L +PMQA + T + + +R ++ G N+ G+ LL
Sbjct: 71 MLHLPMQAINGKALGPGGLTKGMDEA------EIRANVSSAIANIPFAKGANNHMGS-LL 123
Query: 280 SNKESAEVIFKEFAKRGLLFF-DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
+ +S + E K+ L+F D ++P + A +L +P + L+LD+ V + +
Sbjct: 124 TQLDSHMLWVMECLKQNQLYFVDSMTTPFSKAGEKADQLGIPSLKRQLFLDNNVSKKALE 183
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++ + A G + +A + E+I + L + +VP+S L
Sbjct: 184 KQFNLMISNAHMQGSLVVIAHPYPETIRFLQANLPLLEAEGIDLVPVSDL 233
>gi|190150156|ref|YP_001968681.1| hypothetical protein APP7_0887 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251312|ref|ZP_07337490.1| hypothetical protein APP6_0513 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252454|ref|ZP_07534350.1| hypothetical protein appser6_9710 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307263494|ref|ZP_07545109.1| hypothetical protein appser13_9100 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915287|gb|ACE61539.1| hypothetical protein APP7_0887 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649854|gb|EFL80032.1| hypothetical protein APP6_0513 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860046|gb|EFM92063.1| hypothetical protein appser6_9710 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306871137|gb|EFN02866.1| hypothetical protein appser13_9100 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 282
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ +G + AI LP +++A ++A ++ ++ ++ +
Sbjct: 26 AQAGKLAIVIDDIGY-RAKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDVLIHL 84
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMNYRGAMLLSNKESAE 286
PMQ + +S L V + ++ + RL + R Y G+ N+ G+ +++++ E
Sbjct: 85 PMQP-KNRHQPIESGALMVGAS-KENVARLIQAARNQVPYAIGLNNHMGSGATADRQTME 142
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E +K+ L F D + P +V A +L + + +L+LDD +++ +
Sbjct: 143 HLMTELSKQQLFFLDSKTGPSVAAKV-ARELGVNALERNLFLDDNDALHEVQNQFHLALH 201
Query: 347 IARTTGQAIGVAVAFDESIEVISQWL 372
AR G AI + SIEV+ + L
Sbjct: 202 YARKHGSAILIGHPRKNSIEVLEKGL 227
>gi|229022892|ref|ZP_04179412.1| hypothetical protein bcere0029_12380 [Bacillus cereus AH1272]
gi|228738427|gb|EEL88903.1| hypothetical protein bcere0029_12380 [Bacillus cereus AH1272]
Length = 209
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LP +T+A S + A KKG E I+ +PM+ + + +++
Sbjct: 4 LPIPLTIAVMPFLPSTKQDAIAAHKKGHEVIIHMPMEPIRGKKEWLGPKAITTDLSDEEI 63
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
NRL +++ G+ N+ G+ + +++ +I K GL + D ++P ++ +
Sbjct: 64 NNRLEQAIQEIPHAIGMNNHMGSKVTADERIVRLILSACKKHGLFYLDSKTNPNSVVPKI 123
Query: 314 APKLNLPYMVADLYLDD 330
+L +P + L+ DD
Sbjct: 124 GKELGVPVIENQLFFDD 140
>gi|307245693|ref|ZP_07527779.1| hypothetical protein appser1_8960 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254662|ref|ZP_07536490.1| hypothetical protein appser9_9020 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259107|ref|ZP_07540837.1| hypothetical protein appser11_9050 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853395|gb|EFM85614.1| hypothetical protein appser1_8960 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862335|gb|EFM94301.1| hypothetical protein appser9_9020 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866774|gb|EFM98632.1| hypothetical protein appser11_9050 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 282
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ +G + AI LP +++A ++A ++ ++ ++ +
Sbjct: 26 AQAGKLAIVIDDIGY-RAKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDVLIHL 84
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMNYRGAMLLSNKESAE 286
PMQ + +S L V + ++ + RL + R Y G+ N+ G+ +++++ E
Sbjct: 85 PMQP-KNRHQPIESGALMVGAS-KENVARLIQAARNQVPYAIGLNNHMGSGATADRQTME 142
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E +K+ L F D + P +V A +L + + +L+LDD +++ +
Sbjct: 143 HLMTELSKQQLFFLDSKTGPSVAAKV-ARELGVNALERNLFLDDNDALHEVQNQFHLALH 201
Query: 347 IARTTGQAIGVAVAFDESIEVISQWL 372
AR G AI + SIEV+ + L
Sbjct: 202 YARKHGSAILIGHPRKNSIEVLEKGL 227
>gi|149922796|ref|ZP_01911220.1| hypothetical protein PPSIR1_33531 [Plesiocystis pacifica SIR-1]
gi|149816339|gb|EDM75841.1| hypothetical protein PPSIR1_33531 [Plesiocystis pacifica SIR-1]
Length = 312
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 15/240 (6%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSL------DRWMK 214
D + + +AIV+ +G + LL L+F+ NS+ DR ++
Sbjct: 75 DHRIPWDQANGHLAIVIDDVGRELDAFDK---LLALRYPLSFSVLPNSVYTAGVQDR-LR 130
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTG----YFGV 270
++ +E +L +PM+ D + + + LR + G GV
Sbjct: 131 ADHRRPREILLHLPMEPLDARHMSEGEELGEEFLRAGDSPASLRVKVLAALGNVPHAVGV 190
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
N+ G+ L ++ + + +R L F D ++P + + A + +P + ++LD
Sbjct: 191 NNHMGSKLTADNRAMAALMPVLRERELYFLDSRTNPETVAAIEARRAGVPTISRKVFLDH 250
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ + IR L E AR + +A + +EV+ + L Q H + V + P+S L +
Sbjct: 251 EPGKAAIRRSLFEAAEFARDQ-PTVAIAHPSMDVVEVLREELPQLHTQGVGIYPVSQLLR 309
>gi|330900944|gb|EGH32363.1| hypothetical protein PSYJA_26750 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 199
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
++A + G+ +L +PM Y L +L +RL +L + G+ N+
Sbjct: 12 RQAHRAGKTVMLHMPMDPATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNH 65
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 66 MGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERT 125
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ I +L+ +IAR G A+ + + +++V+ + L + V + L +
Sbjct: 126 AEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSM 180
>gi|226310991|ref|YP_002770885.1| hypothetical protein BBR47_14040 [Brevibacillus brevis NBRC 100599]
gi|226093939|dbj|BAH42381.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 260
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A V+ G + GT+ I +P +T+A S + + A +KG + ++ +PM+
Sbjct: 38 MAFVIDDFGNNMQGTEE-ILAMPVPLTVAVMPFMPSTKQDAELAHQKGHDVLVHMPMEPM 96
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + + ++ +R+ ++ G+ N+ G+ + +++ +I K
Sbjct: 97 KGKRSWLGPGAITADLSDDEIRSRVEKAIDDVPHAIGMNNHMGSKITADERIMRIIMKVV 156
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+RGL + D ++ +++ +A ++ +P+ V ++LDD
Sbjct: 157 KERGLFYLDSKTTDKSVAAKVAAEMGVPHAVNQIFLDD 194
>gi|226326856|ref|ZP_03802374.1| hypothetical protein PROPEN_00716 [Proteus penneri ATCC 35198]
gi|225204693|gb|EEG87047.1| hypothetical protein PROPEN_00716 [Proteus penneri ATCC 35198]
Length = 300
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 87/208 (41%), Gaps = 13/208 (6%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
A++AIV+ G + + + L P +++A + A +G+E ++ +PM
Sbjct: 13 AAKLAIVIDDFGYRKKEDNQILQL-PTAVSIAILPDSPHGKEIATRAHAQGREILIHMPM 71
Query: 230 QAFDESYNEDDSYTLKVTQT-----VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ E D+ + Q +Q +N + Y++ G+ N+ G+ + S++++
Sbjct: 72 APISKQPLERDTLKPSMDQAEINRIIQHAINNVPYAV-------GMNNHMGSAMTSDRQA 124
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + K L F D + A +P + ++LD+ + R++L
Sbjct: 125 MDRVIKALNHSNLYFLDSVTIGNTQAATAAKAAGVPSLRRHVFLDNVQTEAETRQQLNRA 184
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWL 372
+AR G AI + ++ + Q L
Sbjct: 185 IALARKNGSAIAIGHPHPSTVRALQQQL 212
>gi|123440475|ref|YP_001004469.1| hypothetical protein YE0075 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087436|emb|CAL10217.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 341
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+++IV+ G + + + P I++A N +A +G+E ++ +PM
Sbjct: 23 AGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAKEMAIKAHNQGREILIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + +++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 82 APLSKQPLERD--TLQPLMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLPGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ L F D + + A + + ++LDD + IR++ E+AR
Sbjct: 140 QVLEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNRAVELAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQ 374
G AI + +I+V+ Q L Q
Sbjct: 200 RNGSAIAIGHPHPATIKVLQQMLPQ 224
>gi|330807031|ref|YP_004351493.1| hypothetical protein PSEBR_a348 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375139|gb|AEA66489.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 260
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
R + LP +T A + + +EA + G+ +L +PM +
Sbjct: 48 RRVLALPGPVTTAIMPDTPHAAEFAREAHRAGKLVMLHMPMDP------ATGPFAWHPEL 101
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+++L RL + G+ N+ G+ + + ++ + +R F D +S +
Sbjct: 102 PIEELGKRLDAAFAAVPYTSGINNHMGSRMTAQPQAMAWLMANLQQRHKFFVDSRTSAQT 161
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ A K+ L + D++LDD+ I +L+ ++AR G A+ + + +++ V+
Sbjct: 162 VAAAEAQKIGLASVSRDVFLDDERTEAAIARQLQTAIDLARQQGSAVMIGHPYPQTLAVL 221
Query: 369 SQWLQQEHVRDVSVVPLSCLAKLSS 393
+ L + + V + + + L S
Sbjct: 222 ERELPKLKAQGVEWIDIKSMISLRS 246
>gi|318603800|emb|CBY25298.1| putative divergent polysaccharide deacetylase [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 334
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+++IV+ G + + + P I++A N +A +G+E ++ +PM
Sbjct: 23 AGKLSIVIDDFGYRPQNENKVLQM-PLPISVAILPNAPYAKEMAIKAHNQGREILIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + + +++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 82 APLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLPGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ L F D + + A + + ++LDD + I ++ E+AR
Sbjct: 140 QTLEHYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIHQQFNRAVELAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQ 374
G AI + +I+V+ Q L Q
Sbjct: 200 RNGSAIAIGHPHPATIKVLQQMLPQ 224
>gi|260914710|ref|ZP_05921175.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631214|gb|EEX49400.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 280
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G Q + I +P I++A + + ++AK++G++ ++ +
Sbjct: 25 AQSAKLAIVIDDIGYHQKEDAQ-IYAMPTEISVAIIPSAPHARQRNEQAKQQGRDVLIHM 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + E L ++Q ++ +R++ + R + G+ N+ G+ S+
Sbjct: 84 PMQPLGQQKIETGGLKLGLSQ--DEVNDRVQTAKRIVSHAIGMNNHMGSAATSDSALMTK 141
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + ++ L F D + R++ +A + + + ++LDD ++ + +
Sbjct: 142 LMRSLKEQHLFFLDSRTIGRSVAGKIAKEYGVKSLDRHIFLDDSDLYADVQRQFQNAVRY 201
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ G AI + ++ V+ L+ +DV +V + L
Sbjct: 202 AQKNGTAIVIGHPRKNTVAVLQAGLKNL-PKDVQLVGIGSL 241
>gi|85060169|ref|YP_455871.1| hypothetical protein SG2191 [Sodalis glossinidius str. 'morsitans']
gi|84780689|dbj|BAE75466.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 317
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
C A ++AIV+ G + T+ + +P N+++A + +A ++ +E +
Sbjct: 18 CPVAQAGKLAIVIDDFGY-RPATENQVLAMPVNVSIAVLPDAPYAREMALKAHRQRREIL 76
Query: 225 LQIPMQAFDESYNEDDSYTL-----KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
+ +PM + E ++ T +V+ +QQ ++ Y++ G+ N+ G+ +
Sbjct: 77 IHLPMAPLSKQPLERNTLTPAMSRDQVSDIIQQATQKVPYAV-------GLNNHMGSAMT 129
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
S+ + + + + F D + + + + + ++LDD + IR
Sbjct: 130 SSLSGMQHVMQALSHYSYYFLDSVTIGNSQAVPASAGTGVRVLKRQVFLDDTANEADIRH 189
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+ +AR G AI + ++ V+ Q L
Sbjct: 190 QFNRAVALARRNGFAIAIGHPHPATVRVLQQML 222
>gi|157163961|ref|YP_001467158.1| ferric-uptake regulator [Campylobacter concisus 13826]
gi|112801347|gb|EAT98691.1| divergent polysaccharide deacetylase family [Campylobacter concisus
13826]
Length = 483
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQA + ++ + TL + ++ + + +++ R N+ G+ S+ +
Sbjct: 321 MIHLPMQA--KHFDSPEIGTLTINESFESMHEKIKKIRRDFPRAKYTNNHTGSRFTSDYD 378
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ ++G +F D + + A K N PY+ D++LDD +R +L
Sbjct: 379 AMDKAYRALIEQGFIFVDSKTIAQTAVARAAKKYNQPYISRDIFLDDDPSASAVRRELVA 438
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
+A+ G AI + +I VI + + ++DV VV L
Sbjct: 439 AVNLAKKRGYAIAIGHPKKNTIAVI-KASKNNILKDVEVVYL 479
>gi|120556079|ref|YP_960430.1| protein of unknown function DUF610, YibQ [Marinobacter aquaeolei
VT8]
gi|120325928|gb|ABM20243.1| protein of unknown function DUF610, YibQ [Marinobacter aquaeolei
VT8]
Length = 272
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 13/221 (5%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ-- 230
IAI++ +G ++ +R + L +TLAF K A + +E +L PM
Sbjct: 33 IAIIIDDMGHNRHEGER-LARLDQPLTLAFLPYRRHTVPLAKLAHAQSKEIMLHAPMANT 91
Query: 231 ---AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
D L + T+++ L + + GV N+ G++L E +
Sbjct: 92 RNFGLGPGGLTPDMDELAIATTLRRALQSIPF-------VSGVNNHMGSLLTQQLEPMDW 144
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ KE + + F D + ++ +A N+P + D++LD + + + ++ K L +
Sbjct: 145 VMKELDRYPVYFVDSRTIANSIAGSVADAYNIPSLTRDVFLDHEQTEEFVDKQFKLLIQT 204
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
AR G AIG+ +++ + + L + +++ +S L
Sbjct: 205 AREKGTAIGIGHPHKVTVDYLEKHLPMLDEQGIAIATVSGL 245
>gi|320354673|ref|YP_004196012.1| hypothetical protein Despr_2585 [Desulfobulbus propionicus DSM
2032]
gi|320123175|gb|ADW18721.1| protein of unknown function DUF610 YibQ [Desulfobulbus propionicus
DSM 2032]
Length = 294
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 2/198 (1%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
D N + A IAI++ +G + R L N+T +F ++A + G
Sbjct: 68 DGNASTTAGRPEIAIIIDDMG-NDLKMGRKFLELDDNLTFSFLPGAPHTQELAEQAFQAG 126
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
+ ++ +PM+ D ++ + L + T + + + L G N+ G+
Sbjct: 127 RTVLVHLPMEPKDTRWSPG-TEALHIADTEEGIRTKTETMLAAVPHAVGTNNHMGSRFTE 185
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
+ + +R L F D ++ + A +L +P ++LD++ KI ++
Sbjct: 186 HGLGMHRVLTVLKERALFFVDSYTTAGSQGLATARRLAVPATRRHVFLDNEKTPSKICDQ 245
Query: 341 LKGLEEIARTTGQAIGVA 358
L L +AR G A+G+
Sbjct: 246 LDQLALLARQQGHAVGIG 263
>gi|317485790|ref|ZP_07944655.1| divergent polysaccharide deacetylase [Bilophila wadsworthia 3_1_6]
gi|316922964|gb|EFV44185.1| divergent polysaccharide deacetylase [Bilophila wadsworthia 3_1_6]
Length = 516
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINL-LPANIT-LAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+ IV++ LG + T + L LP + L FA + + EA GQE ++ +PM
Sbjct: 275 RLTIVMNELGGDKAVTASLLALKLPITFSVLPFAKDAAATATAAHEA---GQEVLVDMPM 331
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + + + + + + + +L G N+ G+ L ++ +
Sbjct: 332 ETMQSPFVKAGPGEITTKMSEEDMRILMDDALGHVPYATGASNFMGSRLTTDTAATRRFC 391
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD-KIREKLKGLEEIA 348
+ A+ GL DD + ++ A + LP L L+D + + LK EE A
Sbjct: 392 EILARSGLYVLDDVTHQESILYAEARRRGLPAWRRALTLNDGPKTEGAVLADLKKAEETA 451
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
R G A+ +A + + +W QE +D+ +VPL
Sbjct: 452 RAKGHAVVIATPAPHVLAALKRW-SQERDKDIRLVPL 487
>gi|152972465|ref|YP_001337611.1| hypothetical protein KPN_03959 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150957314|gb|ABR79344.1| hypothetical protein KPN_03959 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 315
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 85/207 (41%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + T+ + LP+ I++A N +A G E
Sbjct: 17 LAAPAFAGKLSIVIDDFGY-RPQTENQVLALPSTISVAVLPNAPHAREMATKAHNLGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRNQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
+AR G AI + ++ V+ Q
Sbjct: 194 AIALARRNGSAIAIGHPHPTTVRVLQQ 220
>gi|51594416|ref|YP_068607.1| hypothetical protein YPTB0058 [Yersinia pseudotuberculosis IP
32953]
gi|153950008|ref|YP_001399074.1| divergent polysaccharide deacetylase [Yersinia pseudotuberculosis
IP 31758]
gi|170026350|ref|YP_001722855.1| hypothetical protein YPK_4143 [Yersinia pseudotuberculosis YPIII]
gi|186893404|ref|YP_001870516.1| hypothetical protein YPTS_0060 [Yersinia pseudotuberculosis PB1/+]
gi|51587698|emb|CAH19298.1| HYPOTHETICAL 30.7 KD PROTEIN IN SECB-TDH INTERGENIC REGION
[Yersinia pseudotuberculosis IP 32953]
gi|152961503|gb|ABS48964.1| Divergent polysaccharide deacetylase [Yersinia pseudotuberculosis
IP 31758]
gi|169752884|gb|ACA70402.1| protein of unknown function DUF610 YibQ [Yersinia
pseudotuberculosis YPIII]
gi|186696430|gb|ACC87059.1| protein of unknown function DUF610 YibQ [Yersinia
pseudotuberculosis PB1/+]
Length = 336
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 93/225 (41%), Gaps = 3/225 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A +++IV+ G + + + P I++A N +A +G+E
Sbjct: 17 IASTAQAGKLSIVIDDFGYRPQNENKILQM-PLPISVAILPNAPYAREMATKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R + G+ N+ G+ + ++
Sbjct: 76 LIHLPMAPQSKQPLERD--TLQPSMSSEEIQRIIRQAANNVPYAKGMNNHMGSAMTASLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQALGSYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKIFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+AR G AI + +I+V+ Q L Q V V P + L
Sbjct: 194 AVALARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALL 238
>gi|289523286|ref|ZP_06440140.1| polysaccharide deacetylase family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502978|gb|EFD24142.1| polysaccharide deacetylase family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 315
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWM 213
TE P+ K+ GA +AIVV LG S + L +P +T A S
Sbjct: 80 TEEPSKAKSL----KGAYLAIVVDDLGFSYARAEELAGLKIP--LTWAIIPFQRSSKATA 133
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
+ A+ KG ++ +PM+AF + NE + + ++ + + +R +L G GV N+
Sbjct: 134 ELARNKGIPFLVHVPMEAFGD--NESQMHLVALSMDDETIRRNVREALESLPGAIGVNNH 191
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
RG+ S+ + + +E + ++F D ++ ++ + A K + + ++D D
Sbjct: 192 RGSAATSDMRAMRALMEELRQDNMIFLDSRTAASSVAAIEARKAGIFALENGAFIDHLED 251
Query: 334 RDKIREKLKGLEEIARTTGQAI--GVAVAFDESIEVISQWLQQ 374
+ +L+ R GQA G AVA + V +L Q
Sbjct: 252 IKFMWSQLE------RAAGQAQRRGYAVAICHARPVTLTFLNQ 288
>gi|291619436|ref|YP_003522178.1| YibQ [Pantoea ananatis LMG 20103]
gi|291154466|gb|ADD79050.1| YibQ [Pantoea ananatis LMG 20103]
Length = 303
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+F S A A++AIV+ G T + + + P I++A + + +A + G+E
Sbjct: 18 SFASQA--AKLAIVIDDFGYRPTEENKVLQM-PQAISVAVLPDAPYARQMAIKAHQGGRE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQT-----VQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
++ +PM + E ++ T ++++ ++ +N + Y++ G+ N+ G+
Sbjct: 75 VLIHLPMAPLSKQPLEKNTLTPEMSRAEIDRIIRSAVNNVPYAV-------GLNNHMGSK 127
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
+ S+ + + + + L F D + + + A ++ + ++LDD D + I
Sbjct: 128 MTSSLPGMQKVMQALNQYNLYFLDSMTIGNSQSLQAAQGTHVRVLKRRVFLDDSQDINAI 187
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
R++ +A+ G AI + ++ V+ Q L
Sbjct: 188 RQQFNRAVTLAQRDGYAIAIGHPHPNTVRVLQQML 222
>gi|288933028|ref|YP_003437087.1| hypothetical protein Kvar_0143 [Klebsiella variicola At-22]
gi|288887757|gb|ADC56075.1| protein of unknown function DUF610 YibQ [Klebsiella variicola
At-22]
Length = 318
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 85/207 (41%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + T+ + LP+ I++A N +A G E
Sbjct: 17 LAAPAFAGKLSIVIDDFGY-RPQTENQVLALPSTISVAVLPNAPHAREMATKAHNLGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAIGLNNHMGSAMTSNLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRNQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
+AR G AI + ++ V+ Q
Sbjct: 194 AIALARRNGSAIAIGHPHPTTVRVLQQ 220
>gi|271498745|ref|YP_003331770.1| hypothetical protein Dd586_0167 [Dickeya dadantii Ech586]
gi|270342300|gb|ACZ75065.1| protein of unknown function DUF610 YibQ [Dickeya dadantii Ech586]
Length = 309
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++A+V+ G + + + +P I++A N +A +G+E ++ +PM
Sbjct: 22 AGKLALVIDDFGY-RPHNENQVLAMPTAISVAVLPNAPYAREMATKAHAQGREVLIHLPM 80
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + +++ LR ++ + G+ N+ G+ + ++ + +
Sbjct: 81 APMSKQPLERD--TLRPDMSSEEIARILRDAVNKVPYAVGLNNHMGSAMTASLPGMQKVM 138
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + + A + + ++LDD + IR + EIA+
Sbjct: 139 QAMSAYHLYFLDSMTIGSSQASQAAAGTGIKVLKRKVFLDDTQNVADIRRQFSRAVEIAQ 198
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
+G AI + +I+V+ Q L
Sbjct: 199 RSGYAIAIGHPHPTTIQVLQQML 221
>gi|206900827|ref|YP_002250509.1| divergent polysaccharide deacetylase family [Dictyoglomus
thermophilum H-6-12]
gi|206739930|gb|ACI18988.1| divergent polysaccharide deacetylase family [Dictyoglomus
thermophilum H-6-12]
Length = 389
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 18/235 (7%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+IA VV + T +N P + ++ + D ++ K+G E ++ +PM++
Sbjct: 156 KIAFVVDDVVEDNFWTHELLNF-PYTLNISIIPTRKTKDI-AEKVSKRGWEVLMHLPMES 213
Query: 232 FDESYNEDDSY----TLKVTQTVQQLLNRLRYSLRRGTGYFG------VMNYRGAMLLSN 281
SY D Y + V ++ N ++ L R FG V N+ G+ + +
Sbjct: 214 I--SYPRDAKYLVSEAIMVGMDEVEIENIIKTHLER----FGNVKISWVNNHMGSKVTQD 267
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
E+ E + K F K L F D + ++ +A + +P + L++D + D ++I+ +
Sbjct: 268 SETMERVIKVFKKYNLAFLDSRTILNSVGYKMANRSGIPALENMLFIDHENDEERIKARF 327
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
IA+ G + + ++I+V+++ ++ D+ +V +S L ++ S S
Sbjct: 328 IQAVNIAKKRGWGVFILHLRPKTIKVLNELDKEGFFNDLDLVRISDLYEVISEHS 382
>gi|270265206|ref|ZP_06193468.1| hypothetical protein SOD_l00560 [Serratia odorifera 4Rx13]
gi|270040840|gb|EFA13942.1| hypothetical protein SOD_l00560 [Serratia odorifera 4Rx13]
Length = 321
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
C+ +G +++IV+ +G + + A+ +P I++A N A +G+E
Sbjct: 18 VCAAQAG-KLSIVIDDVGY-RPHEEGAVLQMPTAISVAVLPNAPHARLMATRAHSQGREV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHMPMAPLSKQPLERD--TLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALESYRLYFLDSMTIGNSQATRAAAGTGVKVIKRKVFLDDTANEADIRRQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++AR G AI + +++V+ Q L V V P S L
Sbjct: 194 AVDLARRNGSAIAIGHPRPATVKVLQQMLPTLPADIVLVKPSSLL 238
>gi|283954085|ref|ZP_06371610.1| hypothetical protein C414_000080075 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794364|gb|EFC33108.1| hypothetical protein C414_000080075 [Campylobacter jejuni subsp.
jejuni 414]
Length = 361
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 242 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSIPYIQRDVFLD 301
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++LK E+A+ G AI + + + + Q ++ ++ V +V LS
Sbjct: 302 NEDDVNYVKKQLKSAVELAQKKGFAIAIGHPRKNTFKALEQ--SKDLLKSVELVYLS 356
>gi|322514546|ref|ZP_08067579.1| divergent polysaccharide deacetylase [Actinobacillus ureae ATCC
25976]
gi|322119485|gb|EFX91572.1| divergent polysaccharide deacetylase [Actinobacillus ureae ATCC
25976]
Length = 282
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A ++AIV+ +G + AI LP +++A K+A ++ ++ ++ +
Sbjct: 26 AHAGKLAIVIDDIGY-RMKKDNAIYALPKEVSVAIIPVAPYATARAKKAYEQKRDVLIHL 84
Query: 228 PMQAFDESYNEDDSYTL------KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
PMQ ++ + + KV Q +Q N++ Y++ G+ N+ G+ ++
Sbjct: 85 PMQPKNKQQPIESGALMIGASEVKVAQLIQAARNQVPYAI-------GLNNHMGSGATAD 137
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + K A++ L F D + P +V A + + + +L+LDD ++ +
Sbjct: 138 RTTMSHLMKVMAQQQLFFLDSKTGPSVAAKV-AREYGVKALERNLFLDDSDALSDVQRQF 196
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQ 370
E AR G AI + S+ V+ Q
Sbjct: 197 NAAIEYARKHGSAILIGHPRKNSVAVLEQ 225
>gi|242309714|ref|ZP_04808869.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523715|gb|EEQ63581.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 338
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 19/222 (8%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
T++P+ K C ++AI++ IS + I +P IT + + +
Sbjct: 99 TQIPSKPKTQCQ-KPKPQLAIIIDD--ISNFYQYQKIQEIPYKITPSLFPRSIA-SQNTP 154
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKV--TQTVQQLLNRLRYSLRRGTGYFGVMN 272
E KK ++ +P++A + S E Y L QT+Q+ + L+ T Y N
Sbjct: 155 EIAKKADFYMVHLPLEALNFSQKEH-KYLLSTDSKQTIQETIQNLKKDFPNLT-YLN--N 210
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP---------RNLTRVLAPKLNLPYMV 323
+ G+ ++ + + + + F D ++P +N T L N P++
Sbjct: 211 HTGSKFTQTPQAMYFLLEILNENNISFVDSRTTPHTKTRNYYQQNPTTPLNQCQNQPFLE 270
Query: 324 ADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESI 365
D++LD+++D KI + L +IA+T G AI + ++I
Sbjct: 271 RDIFLDNELDITKITQNLIQAVKIAKTKGYAIAIGHPHQQTI 312
>gi|224373177|ref|YP_002607549.1| putative periplasmic protein [Nautilia profundicola AmH]
gi|223588750|gb|ACM92486.1| putative periplasmic protein [Nautilia profundicola AmH]
Length = 330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
K+ ++ +PMQA + + + TL + + +L+R+ + + N+ G+
Sbjct: 160 KEFSHYMVHLPMQAIH--FKKPEPKTLNINDSYLTILSRIDEIKKMFPKAKFINNHTGST 217
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
SNKE+ +F+ + F D ++P + + + +P +++LD++ + I
Sbjct: 218 FTSNKEAMIKLFRALKTENMGFVDSKTTPNSKAKEAQKEFYIPLYSRNIFLDNEENPTYI 277
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
R +LK +IA+ G AI + ++E + + ++++ VV + L+K
Sbjct: 278 RNQLKKAVKIAQKRGYAIAIGHPHSITLETLKN--STDILKNIDVVYIDELSK 328
>gi|205373558|ref|ZP_03226361.1| hypothetical protein Bcoam_09870 [Bacillus coahuilensis m4-4]
Length = 258
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 112/221 (50%), Gaps = 11/221 (4%)
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF- 232
AIV+ LG + GT+ + L P +T+A + + ++A K G E I+ +P++
Sbjct: 30 AIVIDDLGNNMKGTEEILQL-PTILTVAVMPHLETSKEDAEKAHKLGHEVIIHLPLEPVR 88
Query: 233 -DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+S+ S T ++ +++ R+R +++ G+ ++ G+ +++ +I +
Sbjct: 89 GKKSWLGPGSITTDLSD--EEIRKRVRLAIKSVPHAVGMNHHLGSKASADERVMRIILEV 146
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE-IART 350
+ L + D +S +++ LA +L + Y+ +++LD + + K K LE+ +AR
Sbjct: 147 CKENNLYYLDSKTSTQSVIPKLANELGVSYLENEIFLDHVGTIEHMVGKAKLLEKRLARE 206
Query: 351 TGQ-AIG-VAVAFDESIEVISQWLQQ-EHVRDVSVVPLSCL 388
AIG V + D+ +V+ +++ + E + D VPLS L
Sbjct: 207 NELIAIGHVGITGDKMADVLREFIPEFEEIGD--AVPLSKL 245
>gi|332531758|ref|ZP_08407643.1| hypothetical protein PH505_aa00630 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038734|gb|EGI75176.1| hypothetical protein PH505_aa00630 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 208
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + +E +L +PMQA + + TL + + +QL L +L GV N+ G
Sbjct: 19 ASQSNKELLLHVPMQALNGKELGPGALTLNMNK--EQLQQTLGTALASLPQVKGVNNHMG 76
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ L ++ + + KR L F D ++ + + A L + + ++LD+ +
Sbjct: 77 SALTQKSQAMKWTMEVLKKRHLYFLDSRTTDLSQAQNAANFLGVANISRQVFLDNITTPE 136
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+++ +L+ L+++A + AI +A + E+IE + L + + +VP+S L +
Sbjct: 137 QLQLRLEELKQLAISHSFAIAIAHPYPETIEFLRHALPELTKQGFELVPVSQLVE 191
>gi|206578516|ref|YP_002236021.1| polysaccharide deacetylase family protein [Klebsiella pneumoniae
342]
gi|290511821|ref|ZP_06551189.1| yibQ [Klebsiella sp. 1_1_55]
gi|206567574|gb|ACI09350.1| polysaccharide deacetylase family protein [Klebsiella pneumoniae
342]
gi|289775611|gb|EFD83611.1| yibQ [Klebsiella sp. 1_1_55]
Length = 318
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 85/207 (41%), Gaps = 3/207 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + T+ + LP+ I++A N +A G E
Sbjct: 17 LAAPAFAGKLSIVIDDFGY-RPQTENQVLALPSTISVAVLPNAPHAREMATKAHNLGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 134 GMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRTQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
+AR G AI + ++ V+ Q
Sbjct: 194 AIALARRNGSAIAIGHPHPTTVRVLQQ 220
>gi|294638294|ref|ZP_06716547.1| YibQ protein [Edwardsiella tarda ATCC 23685]
gi|291088547|gb|EFE21108.1| YibQ protein [Edwardsiella tarda ATCC 23685]
Length = 294
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A ++AIV+ G + ++ + LP IT+A N A +G+E
Sbjct: 1 MAAPAQAGKLAIVIDDFGY-RPHEEKQVLALPLPITIAVLPNAPHAREMALRAHAQGREI 59
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E + TL+ T + ++ + ++ G+ N+ G+ + SN
Sbjct: 60 LIHLPMAPLSKQPLERN--TLQPTMSEAEIQRIIHQAVDNVPYAVGMNNHMGSAMTSNLA 117
Query: 284 SAEVIFKEFAKRGLLFFDDGSS-PRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L+F D + + A + + ++LDD + IR +L
Sbjct: 118 GMQKVMRALEQYHFLYFLDSVTIAHSQVSNAAQGTGVKVIKRKVFLDDAQNESAIRAQLN 177
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWL 372
++AR G AI + ++ V+ Q L
Sbjct: 178 RAIQLARRNGSAIAIGHPHPTTVRVLQQML 207
>gi|77456558|ref|YP_346063.1| hypothetical protein Pfl01_0330 [Pseudomonas fluorescens Pf0-1]
gi|77380561|gb|ABA72074.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
Length = 258
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 88/202 (43%), Gaps = 7/202 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A + +++ LG + +R + L P +T A + + +EA + G+ IL +PM
Sbjct: 29 AYLTLIIDDLGQNLPRDRRVLAL-PGPVTTAIMPDTPHATEFAREAHRAGKVVILHMPMD 87
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ +++L RL + + G+ N+ G+ + + + +
Sbjct: 88 P------ATGPFAWHPELPIEELEKRLNAAFKMVPYTAGINNHMGSRMTAQPVAMAWLMG 141
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E +R F D +S + + A K++L + D++LDD+ I +L+ +A
Sbjct: 142 ELQRRHKFFVDSRTSAQTVAAQQAQKIDLASVSRDVFLDDERTEAAILTQLQTAISLAHK 201
Query: 351 TGQAIGVAVAFDESIEVISQWL 372
G A+ + + +++ V+ + L
Sbjct: 202 QGSAVMIGHPYPQTLAVLEREL 223
>gi|293393596|ref|ZP_06637906.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291423931|gb|EFE97150.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 316
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 87/202 (43%), Gaps = 3/202 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++IV+ +G + + A+ +P I++A N A +G+E ++ +PM
Sbjct: 24 GKLSIVIDDVGY-RPHEENAVLQMPLAISVAVLPNAPHAHLMATRAHSQGREVLIHMPMA 82
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ E D TL+ + + ++ +R ++ G+ N+ G+ + S+ + + + +
Sbjct: 83 PLSKQPLERD--TLQPSMSSDEVQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPAMQKVMQ 140
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
L F D + + A + + ++LDD IR + E+AR
Sbjct: 141 ALESYNLYFLDSMTIGNSQATRAAAGTGVKVIKRRVFLDDTASEADIRHQFNRAVELARR 200
Query: 351 TGQAIGVAVAFDESIEVISQWL 372
G AI + +++V+ Q L
Sbjct: 201 NGSAIAIGHPRPATVKVLRQML 222
>gi|312879555|ref|ZP_07739355.1| protein of unknown function DUF610 YibQ [Aminomonas paucivorans DSM
12260]
gi|310782846|gb|EFQ23244.1| protein of unknown function DUF610 YibQ [Aminomonas paucivorans DSM
12260]
Length = 338
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+A+VV +G +R + L LP +T A + K A+ G ++ +PM
Sbjct: 108 GRVALVVDDMGYDLAVARRLVGLGLP--LTWAILPDAPHAAATAKIARDAGIPYLVHLPM 165
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
QA + +D Y + + + + R + G FGV N+RG+ +++ + E
Sbjct: 166 QA--QGDGDDGPYAVASGWSAEVIRERSLRAFEALPGAFGVNNHRGSRATADRVAMERFL 223
Query: 290 K--EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ A+ G +F D ++ + +A + + D +LD + + + IR + +
Sbjct: 224 SVLQEARPGWIFLDSRTNGASCGFSVAQEKGIRTSRNDRFLDHRDEDEAIRAAFEAGASL 283
Query: 348 ARTTGQAI 355
AR GQAI
Sbjct: 284 ARRKGQAI 291
>gi|251791501|ref|YP_003006222.1| hypothetical protein Dd1591_3943 [Dickeya zeae Ech1591]
gi|247540122|gb|ACT08743.1| protein of unknown function DUF610 YibQ [Dickeya zeae Ech1591]
Length = 309
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++A+V+ G + + + +PA I++A N +A +G+E ++ +PM
Sbjct: 22 AGKLALVIDDFGY-RPHNENQVLAMPAAISVAVLPNAPYAREMAMKAHAQGREVLIHLPM 80
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + +++ LR ++ + G+ N+ G+ + ++ + +
Sbjct: 81 APMSKQPLERD--TLRPDMSSEEIARILRDAVNKVPYAVGLNNHMGSAMTASLPGMQKVM 138
Query: 290 KEFAKRGLLFFDD---GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ L F D GSS +R A + + ++LDD + IR + +
Sbjct: 139 QAMTTYRLYFLDSMTIGSS--QASRAAA-GTGIKVLKRKVFLDDTQNVADIRRQFSRAVD 195
Query: 347 IARTTGQAIGVAVAFDESIEVISQWL 372
IA+ +G AI + +I+V+ Q L
Sbjct: 196 IAQRSGYAIAIGHPHPATIQVLQQML 221
>gi|153952202|ref|YP_001398408.1| putative periplasmic protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939648|gb|ABS44389.1| putative periplasmic protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 207
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P+ A D YN+ + TL + +++ +++ + + N+ G++ SN+E
Sbjct: 44 LVHLPLAAID--YNKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEE 101
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ +++ + + F D + + +A +LN+PY+ D++LD++ D + ++++L+
Sbjct: 102 AMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQLEN 161
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++A+ G AI + + + + Q ++ ++ V +V LS
Sbjct: 162 AVKLAQKKGFAIAIGYPRKNTFKALEQ--SKDLLKGVELVYLS 202
>gi|238921665|ref|YP_002935180.1| hypothetical protein NT01EI_3821 [Edwardsiella ictaluri 93-146]
gi|238871234|gb|ACR70945.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 312
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 4/211 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A ++AIV+ G + + + P +T+A N + A +G+E
Sbjct: 17 LTAPAQAGKLAIVIDDFGYRPREENKVLEM-PLPVTIAVLPNAPHAREMAQRAHAQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ T + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPTMSEAEIQRIIRQAVGNVPYAVGMNNHMGSAMTSSLT 133
Query: 284 SAEVIFKEFAKRGLLFF-DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L+F D + + A + + ++LDD IR +L
Sbjct: 134 GMQKVMRALEQYHFLYFLDSMTISHSQVSNAAQGTGIRVIKRKVFLDDTQSESAIRTQLN 193
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
+AR G AI + ++ V+ Q L
Sbjct: 194 RAITLARRNGSAIAIGHPHPATVRVLQQMLH 224
>gi|119773199|ref|YP_925939.1| hypothetical protein Sama_0057 [Shewanella amazonensis SB2B]
gi|119765699|gb|ABL98269.1| protein of unknown function DUF610, YibQ [Shewanella amazonensis
SB2B]
Length = 250
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A GA++AI++ +G T + LP +ITL+ + + + ++G E +L +
Sbjct: 16 AHGAQLAIIIDDIGYRHT--DEDVLSLPKDITLSVIPSSPLGVKLASKGHQRGHEIMLHL 73
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ+ + T + + Q++ ++ ++ R G N+ G+ML
Sbjct: 74 PMQSLNARPLGQGGLTSDMDE--QEIKRKVDDAMVRIPFAKGANNHMGSMLTQLDSHMLW 131
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D ++ + A ++ +P + ++LD+ + + ++ K + E
Sbjct: 132 VMERLKHNNLYFVDSLTTRYSKAGAKAEQVGVPLLKRHVFLDNDTSKRGLEKQFKLMMEQ 191
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A G + +A +++ ++ L + +++VP S L
Sbjct: 192 AHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSEL 232
>gi|239906405|ref|YP_002953146.1| hypothetical protein DMR_17690 [Desulfovibrio magneticus RS-1]
gi|239796271|dbj|BAH75260.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 390
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 2/218 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+ +V+ +G + + LP ++TLA N A + E IL PMQ
Sbjct: 172 RMVVVIDDIG-DHPVMAKNLTELPFSVTLAILPNRPRTRSVEAMAASQHVEIILHQPMQP 230
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
L +++ L +L + G+ N+ G+ S+ + +
Sbjct: 231 GTYPRVNPGPGALFTDMEPERVKEILADNLSQVPHVKGINNHMGSAFTSDPAGMDAVMAV 290
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++GL F D +S + A K +P+ ++LD+ + I +LK E A
Sbjct: 291 LKQKGLFFLDSVTSAVSAAPEAARKHGVPFYRRAVFLDNVRNVRTILGQLKTAERNALKN 350
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G+AI + + E++E + W ++ R V VV L+ L
Sbjct: 351 GRAIAIGHPYGETLEALKIWAKERDGR-VDVVTLTELG 387
>gi|24371646|ref|NP_715688.1| hypothetical protein SO_0046 [Shewanella oneidensis MR-1]
gi|24345408|gb|AAN53133.1|AE015456_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 251
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 94/221 (42%), Gaps = 4/221 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
++ A+IA+++ +G T A+ LP+++TL+ + + K A G E +L +
Sbjct: 17 SNAAQIALIIDDIGYRHT--DEAVLSLPSSVTLSVLPHTPLSSKLAKAAHANGHEIMLHL 74
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQA + T + + Q+ + + ++ G N+ G++L +
Sbjct: 75 PMQALNGKALGVGGLTNNMNEA--QIRSSVLAAMASVPFAKGANNHMGSLLTQLDDPMLW 132
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + ++ F D ++ A +L +P + L+LD+ V + + +
Sbjct: 133 VMETLKQKQFYFVDSMTTKFTKAGDRADQLGVPLLRRQLFLDNDVSTQALERQFNLMISQ 192
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A G + +A + E+I + L + + +VP S L
Sbjct: 193 AHAQGSLVAIAHPYPETIHFLKANLARLKAEGIELVPTSRL 233
>gi|310765988|gb|ADP10938.1| conserved uncharacterized protein YigQ [Erwinia sp. Ejp617]
Length = 304
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A +++IV+ G Q+ + + PA I++A N +A + G E
Sbjct: 16 IASPAWAGKLSIVIDDFGYRPALEQQVLQM-PAAISVAVLPNAPHAREMATKAHQSGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R + G+ N+ G+ + S+
Sbjct: 75 LIHLPMAPLSKQPLEKD--TLRPDMSTEEIGRIIREAAAAVPYAVGLNNHMGSAMTSSLP 132
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + F D + + A N+ + ++LDD + IR +
Sbjct: 133 AMQKVMQILNHYHFYFLDSMTIGNSQATRAAEGTNVKVVKRRVFLDDSQNEADIRVQFTR 192
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A+ G AI + ++ V+ Q L
Sbjct: 193 AVRLAQRDGSAIAIGHPHPSTVRVLQQML 221
>gi|223041917|ref|ZP_03612102.1| hypothetical protein AM202_0513 [Actinobacillus minor 202]
gi|223017271|gb|EEF15698.1| hypothetical protein AM202_0513 [Actinobacillus minor 202]
Length = 282
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G S QR L P I++A + + A + ++ ++ +
Sbjct: 25 AQAAKLAIVIDDIGYSVREDQRVYQL-PKEISVAIIPSAPYAKVRAENAFAQKRDILIHL 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + + L V ++ + L + +R G+ N+ G+ ++K +
Sbjct: 84 PMQP-QNAQQAIEKPALLVGDDFEKARSLLENARQRVPYAIGLNNHMGSGATADKATMRH 142
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ A++ L F D + P T+V A + + + ++LDD + + + + +
Sbjct: 143 FMQALAEQKLFFLDSKTGPSVATKV-AVEFGISALERHVFLDDSNEYHDVLHQFQQAKAY 201
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQ 373
AR G AI + SI+V+ + L+
Sbjct: 202 ARKHGVAILIGHPRKNSIDVLEKELK 227
>gi|78777856|ref|YP_394171.1| hypothetical protein Suden_1659 [Sulfurimonas denitrificans DSM
1251]
gi|78498396|gb|ABB44936.1| Protein of unknown function DUF610, YibQ [Sulfurimonas
denitrificans DSM 1251]
Length = 364
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+A +S+ ++ TL+V + ++++ R+ + + N+ G+ +++
Sbjct: 204 MVHLPMEA--QSFKSEEPLTLRVDDSNEKIVQRVVEIKKLFPKVKYINNHTGSKFTADEA 261
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + K ++F D ++ + + ++ K L Y+ D++LD ++D+ I ++K
Sbjct: 262 AMDRLISALKKSDIIFVDSRTTGESKAQKISKKYALEYIGRDVFLDHKMDKAYILSQIKK 321
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
E+A+ G AI + +I I++
Sbjct: 322 AIEVAKKHGSAIAIGHPHANTIAAINE 348
>gi|260599915|ref|YP_003212486.1| hypothetical protein CTU_41230 [Cronobacter turicensis z3032]
gi|260219092|emb|CBA34447.1| Uncharacterized protein yibQ [Cronobacter turicensis z3032]
Length = 286
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 3/198 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+V+ G + T+ + +PA +++A N +A +G + ++ +PM +
Sbjct: 1 MVIDDFGY-RPSTENQVLAMPAEVSVAVLPNAPHAREMATKAHNQGHDVLIHLPMAPLSK 59
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
E D TL+ + +++ +R ++ G+ N+ G+ + S+ + + A
Sbjct: 60 QPLEKD--TLRPDMSSEEIARIIREAVNDVPYAIGMNNHMGSAMTSSLPGMQKVMAALAH 117
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
L F D + + A + + ++LDD + IR + +AR G A
Sbjct: 118 YNLFFLDSMTIGNSQAMRAAAGTGVKVIKRKVFLDDIQNEADIRYQFNRAVALARRNGSA 177
Query: 355 IGVAVAFDESIEVISQWL 372
I + ++ V+ Q L
Sbjct: 178 IAIGHPHPSTVRVLQQML 195
>gi|257457722|ref|ZP_05622885.1| divergent polysaccharide deacetylase family protein [Treponema
vincentii ATCC 35580]
gi|257444890|gb|EEV19970.1| divergent polysaccharide deacetylase family protein [Treponema
vincentii ATCC 35580]
Length = 470
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 197 NITLAFASNGNSLD--------------------RWMKEA----KKKGQEAILQIPMQAF 232
N+T F G++LD R+ E+ +K G++ IL PMQ+
Sbjct: 248 NLTFVFDDAGHNLDQLEYFLRLPFPCTIAVLPGLRYSSESARRIRKAGKQVILHQPMQSV 307
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N + + +Q+ N +R +L G+ N+ G+++ +++ + +
Sbjct: 308 DLHINPGPG-AVTPGLSAEQIKNIVRKNLEEIWPVAGMNNHEGSLMTADEAAMRAVLDVV 366
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
A++ + F D ++ +++ +A + N+ +++D+ R + ++K IAR G
Sbjct: 367 AEKHIFFLDSRTTAKSVVSKVAKEKNMVVWERAIFIDNDKSRAAMETQIKKGLSIARQKG 426
Query: 353 QAIGVAVAF 361
AI + F
Sbjct: 427 SAIMIGHVF 435
>gi|197117641|ref|YP_002138068.1| divergent polysaccharide deacetylase domain-containing protein
[Geobacter bemidjiensis Bem]
gi|197087001|gb|ACH38272.1| divergent polysaccharide deacetylase domain protein [Geobacter
bemidjiensis Bem]
Length = 317
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 5/205 (2%)
Query: 172 RIAIVVSGLGIS--QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+AI++ +G S + T ++I L IT + + + A G E ++ +PM
Sbjct: 100 RVAIIIDDMGSSMQELQTLQSIGL---PITYSIIPSLPRARQVADSAHAAGAEVMVHMPM 156
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + +S L VT ++ R+ R G N+ G+ + + E
Sbjct: 157 EPEGYPKQKMESIGLLVTMDDAEIAKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAAL 216
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
++G+ F D +SP ++ A L + ++LD+ D I ++L +AR
Sbjct: 217 GVLKEKGVFFIDSRTSPASVGYQTARALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVAR 276
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQ 374
G AI + ++ + +L +
Sbjct: 277 KRGGAIAICHPHPATLRALKAYLPE 301
>gi|315185549|gb|EFU19318.1| protein of unknown function DUF610 YibQ [Spirochaeta thermophila
DSM 6578]
Length = 311
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 214 KEAKKKGQEA----ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFG 269
KE K QEA L +PM+ E + L V+ + ++ + L G G
Sbjct: 130 KEVALKVQEAGKTLFLHLPMEP--EGDEDPGPGALYVSMSWNEIEKVIAEDLASVPGVQG 187
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
V N+ G+ + E I A GLLF D ++ ++ R A +L +P M D++LD
Sbjct: 188 VNNHMGSRFTKDPLRMEWILSILAAGGLLFVDSRTTAESVVRETALRLGVPVMERDVFLD 247
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVA 358
++ + + +IAR G+A+ +
Sbjct: 248 NEQTEAYVEQAFMHAVQIARRRGRAVAIG 276
>gi|317050088|ref|YP_004117736.1| hypothetical protein Pat9b_3890 [Pantoea sp. At-9b]
gi|316951705|gb|ADU71180.1| protein of unknown function DUF610 YibQ [Pantoea sp. At-9b]
Length = 301
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 89/211 (42%), Gaps = 13/211 (6%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+A +++IV+ G + + + PA I++A N +A + G E ++
Sbjct: 19 SAHAGKLSIVIDDFGYRPVEENKVLQM-PAAISVAVLPNATYAREMATKAHQSGHEVLIH 77
Query: 227 IPMQAFDESYNEDDSYT-----LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
+PM + E D+ T ++ + + + ++ Y++ G+ N+ G+ + S+
Sbjct: 78 LPMAPLSKQPLEKDTLTPEMSSAEIERIIHDAVGKVPYAV-------GLNNHMGSKMTSS 130
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + F D + + + A ++ + ++LDD + IR++
Sbjct: 131 LPGMQKVMQVLNHYNFYFLDSMTIGNSQSVPAAQGTHVKVLKRRVFLDDSQNDAAIRQQF 190
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
++A+ G AI + ++ V+ Q L
Sbjct: 191 TRAVKLAQRDGYAIAIGHPHPNTVRVLQQML 221
>gi|319956136|ref|YP_004167399.1| hypothetical protein Nitsa_0380 [Nitratifractor salsuginis DSM
16511]
gi|319418540|gb|ADV45650.1| protein of unknown function DUF610 YibQ [Nitratifractor salsuginis
DSM 16511]
Length = 340
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 115/267 (43%), Gaps = 26/267 (9%)
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN-KVGREDTEVPAMDKNFCSNASGAR 172
TV P + + + E+R+ GL ++L+ K K + E P+ K +S
Sbjct: 67 TVTVAPKQPSLVGEEYPKEDRVGFGL--EDLIEKTRKRAKGKNESPST-KATPKKSSSPE 123
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ +++ +SQ AI LP +T + + +++ + K + ++ P+++
Sbjct: 124 LVLIIDD--VSQPRQLAAIRKLPFPVTPSIFPP-SQMNKHTPKLAKGLRHYMIHFPLESG 180
Query: 233 DESYN---------EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+ N +D + K + ++ L R+ + N+ G++ SN
Sbjct: 181 SKKMNRFEKTLFVRDDPAKVRKRVEEIRHLFPSARF----------LNNHTGSVFTSNYR 230
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ ++ K G +F D +S + R +A + ++PY+ D++LD+ +R +LK
Sbjct: 231 AMYRLYGFLKKEGFIFLDSRTSGHSKVRKIAAEYHMPYLGRDVFLDNVQIPQAVRTQLKR 290
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQ 370
+A+ G AI + ++ V+ Q
Sbjct: 291 AVRLAKKRGYAIAIGHPHPVTLRVLKQ 317
>gi|282858015|ref|ZP_06267216.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584169|gb|EFB89536.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 323
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 12/247 (4%)
Query: 127 SLPTIEERLILGLSKKELLAKNKVGR-EDTEVPAMDKNFCSNASGARIAIVVSGLGISQT 185
+ P++E+ L K L+A + V R + +P K ++ G +A+V+ G +
Sbjct: 55 AFPSLEKTLS-STKKTILVAASWVARLQSAALPKKGKPAAASRPG--LALVIDDFGYNYG 111
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
+R I L T A + + A K+GQ +L +PMQA + N +Y +
Sbjct: 112 MAER-IARLKLRATWAIIPGTPHSLKIAEYAAKQGQPFLLHVPMQALGDP-NGGRNYVIG 169
Query: 246 V---TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
+ + + + L L+ R G+ N+RG+ S+ + K + F D
Sbjct: 170 IDVPEKKMAEYLASLQKDFPRA---IGINNHRGSKATSDAPTMRRFMKALSATRWGFLDS 226
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
+S + + + +A + +P + +++D D ++ + +AR G A+ + A +
Sbjct: 227 HTSGKTVAQKVALEYRIPVVQNKVFIDGTTDLSAMKAQFNAALRLARKYGNAVAICHARE 286
Query: 363 ESIEVIS 369
++ ++
Sbjct: 287 GTLPFLA 293
>gi|238754759|ref|ZP_04616111.1| hypothetical protein yruck0001_30950 [Yersinia ruckeri ATCC 29473]
gi|238707067|gb|EEP99432.1| hypothetical protein yruck0001_30950 [Yersinia ruckeri ATCC 29473]
Length = 328
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 3/208 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A +++IV+ G + + I +P I++A +A +G+E ++
Sbjct: 20 TAQAGKLSIVIDDFGY-RPQNENQILQMPLPISVAILPYAPHAKEMAIKAHSQGREVLIH 78
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 79 LPMAPLSRQPLERD--TLQPSMSSEEIQRIIRQAVSNVPYAVGMNNHMGSAMTSSLPGMQ 136
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + L F D + A + + ++LDD + IR++ +
Sbjct: 137 KVMQALEHYSLYFLDSVTIGNTQASKAAEGTGVKVIKRKVFLDDVQNDVAIRQQFNRAIQ 196
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQ 374
+AR G AI + +I V+ Q L+Q
Sbjct: 197 LARKNGSAIAIGHPHPSTIRVLQQMLRQ 224
>gi|118580822|ref|YP_902072.1| hypothetical protein Ppro_2408 [Pelobacter propionicus DSM 2379]
gi|118503532|gb|ABL00015.1| protein of unknown function DUF610, YibQ [Pelobacter propionicus
DSM 2379]
Length = 342
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 5/222 (2%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFA--SNGNSLDRWMKEAKKKGQEAILQIP 228
R+AI++ +G G + A +L + L FA S A G E ++ +P
Sbjct: 124 GRLAIIIDDMG---AGMREARSLAAIGVPLTFAIIPGLRSCREVAAFAAGNGIETMIHLP 180
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQ+ +S L V + R+ R G N+ G+ ++ +
Sbjct: 181 MQSKGWPQQRLESNGLLVAMEEADIRERMEGFARDVPHAVGANNHMGSEFTEHEPQMSTV 240
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
RGL F D ++PR++ + LA ++ + ++LD++ + IR +L A
Sbjct: 241 LGVLKGRGLFFIDSVTTPRSVGQRLAREMGVRSGRRSVFLDNEQNGAYIRGQLNQAVRQA 300
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
R G AI + +I ++ L + V++VP S L +
Sbjct: 301 RKNGGAIAICHPHPATIATLAAALPTLQQQGVTLVPASRLVR 342
>gi|259906778|ref|YP_002647134.1| hypothetical protein YigQ [Erwinia pyrifoliae Ep1/96]
gi|224962400|emb|CAX53855.1| conserved uncharacterized protein YigQ [Erwinia pyrifoliae Ep1/96]
gi|283476564|emb|CAY72392.1| Uncharacterized protein yibQ precursor [Erwinia pyrifoliae DSM
12163]
Length = 304
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A +++IV+ G Q+ + + PA I++A N +A + G E
Sbjct: 16 IASPAWAGKLSIVIDDFGYRPALEQQVLQM-PAAISVAVLPNAPHAREMATKAHQSGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ +++ +R + G+ N+ G+ + S+
Sbjct: 75 LIHLPMAPLSKQPLEKD--TLRPDMPTEEIGRIIREAAAAVPYAVGLNNHMGSAMTSSLP 132
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + F D + + A N+ + ++LDD + IR +
Sbjct: 133 AMQKVMQILNHYHFYFLDSMTIGNSQATRAAEGTNVKVVKRWVFLDDSQNEADIRVQFTR 192
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A+ G AI + ++ V+ Q L
Sbjct: 193 AVRLAQRDGSAIAIGHPHPSTVRVLQQML 221
>gi|152990904|ref|YP_001356626.1| hypothetical protein NIS_1160 [Nitratiruptor sp. SB155-2]
gi|151422765|dbj|BAF70269.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 334
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVT---QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
++ +PM+A + E D TL++T QT+++++ ++R + + N+ G+ +
Sbjct: 172 MIHLPMEANHYLHEEPD--TLRITSSLQTIERVIAKIRKEFPKAKV---INNHTGSRFTA 226
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
+ E+ + ++K K +F D ++ + + L +L PY+ +++LD++ + I+ +
Sbjct: 227 DYEAMKRLYKVLDKYHFVFLDSRTTAQTVVPKLDKELGRPYLARNVFLDNEQNVAYIKNQ 286
Query: 341 LKGLEEIARTTGQAIGVA 358
L+ +A+ G AI +
Sbjct: 287 LRQAVALAKKRGVAIAIG 304
>gi|304407156|ref|ZP_07388810.1| protein of unknown function DUF610 YibQ [Paenibacillus
curdlanolyticus YK9]
gi|304344143|gb|EFM09983.1| protein of unknown function DUF610 YibQ [Paenibacillus
curdlanolyticus YK9]
Length = 284
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+AIV+ G TGT + L P T+A + + A K G + I+ +PM+
Sbjct: 56 RVAIVIDDFGNGMTGTTEMMKL-PFPFTVAVMPFMPTTRADAETAHKLGHDVIVHMPMEP 114
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
L + ++ R+ ++ G+ N+ G+ + +++ ++
Sbjct: 115 NKGKREWLGPGALTTDLSDSEIRKRVEAAIDNVPYAVGMNNHMGSKVTADERVMRIVLTV 174
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+RGL F D ++ + + +A +L +P + ++LDD
Sbjct: 175 CKERGLFFLDSRTTYKTVVPKIANELGVPLLSNHVFLDD 213
>gi|253991822|ref|YP_003043178.1| hypothetical protein PAU_04350 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783272|emb|CAQ86437.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 301
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F S +R+AIV+ G + + + P I++A + ++A K+ +E
Sbjct: 17 FSLQTSASRLAIVIDDFGYRPHNESKILQM-PVAISIAILPDSPYGREMAEKAYKQRREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ T + +++ ++ ++++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQRLEPD--TLQPTMSSEEIDRIIQQAIQKVPYAVGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ L F D + + A + + +++LDD + R +L
Sbjct: 134 GMQKVMHSLSRYRLYFLDSVTIGNSQATKAAKGTPVRVIRRNVFLDDVQSEAETRYQLNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
IAR G AI + +I + + L
Sbjct: 194 AISIARKNGSAIAIGHPHPTTIRALQKML 222
>gi|307133063|ref|YP_003885079.1| putative periplasmic protein [Dickeya dadantii 3937]
gi|306530592|gb|ADN00523.1| Putative periplasmic protein [Dickeya dadantii 3937]
Length = 268
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A N +A +G+E ++ +PM + E D TL+ + +++
Sbjct: 4 MPTAISVAVLPNAPYARDMATKAHAQGREVLIHLPMAPMSKQPLERD--TLRPDMSSEEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD---GSSPRNLT 310
LR ++ + G+ N+ G+ + ++ + + + L F D GSS +
Sbjct: 62 ARILRDAVNKVPYAVGLNNHMGSAMTASLPGMQKVMQAMTAYRLYFLDSMTIGSS--QAS 119
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
R A + + ++LDD + IR + EIA+ +G AI + +I+V+ Q
Sbjct: 120 RAAA-GTGIKVLKRKVFLDDTQNVADIRRQFSRAVEIAQRSGYAIAIGHPHPTTIQVLQQ 178
Query: 371 WL 372
L
Sbjct: 179 ML 180
>gi|88858432|ref|ZP_01133074.1| hypothetical protein PTD2_13619 [Pseudoalteromonas tunicata D2]
gi|88820049|gb|EAR29862.1| hypothetical protein PTD2_13619 [Pseudoalteromonas tunicata D2]
Length = 251
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANIT---LAFASNGNSLDRWMKEAKKKGQEAILQ 226
++AIV+ +G + AINL P ++ L F S + + AKK E +L
Sbjct: 15 AGQVAIVIDDIGYHERDLD-AINL-PGEVSFSILPFTPFAKSFAQQAQLAKK---EMLLH 69
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PMQA S E + +QL + L +L G+ N+ G++L +
Sbjct: 70 VPMQAI--SGKELGPGAITYDMNKEQLQHMLARALDDLPQVKGINNHMGSLLTQKIKPMS 127
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ +R L F D ++ + + +A + + +++D+ ++ ++ L
Sbjct: 128 WTMEVLKERNLYFLDSKTTQHSQAQHMANLFGVDNISRHVFIDNIPSEKQMTFRMNQLIR 187
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ AI +A + E++ + Q L + + + +VPLS L
Sbjct: 188 LAKKNDYAIAIAHPYPETLAFLEQALPKLAEQGIKLVPLSDL 229
>gi|315127791|ref|YP_004069794.1| hypothetical protein PSM_A2729 [Pseudoalteromonas sp. SM9913]
gi|315016305|gb|ADT69643.1| hypothetical protein PSM_A2729 [Pseudoalteromonas sp. SM9913]
Length = 250
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 10/229 (4%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLL--PANITLAFASNGNSLDRWMKEAKKKGQE 222
S +IAIV+ +G Q R + L P ++ + + + A + +E
Sbjct: 14 SSAVKAKQIAIVIDDIGYHQ----RDLEFLSLPGQLSYSILPHTPYSQIFATLASQSNKE 69
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQT-VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
+L +PMQA + + TL + + +QQ L SL + G V N+ G+ L
Sbjct: 70 LLLHVPMQALNGKKLGPGALTLNMDKAQLQQTLGNALASLPQVKG---VNNHMGSALTQQ 126
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
++ + + KR L F D ++ + + A L + + ++LD+ ++++ +L
Sbjct: 127 SQAMKWTMEVLKKRQLYFLDSRTTELSQAQNAANFLGVENISRHVFLDNITTTEQLQLRL 186
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ L+ A AI +A + E+I+ + L Q + +VP+S L +
Sbjct: 187 EELKSKATKYQFAIAIAHPYPETIDFLRHALPQLSEQGFELVPVSQLVE 235
>gi|15603373|ref|NP_246447.1| hypothetical protein PM1508 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721894|gb|AAK03592.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 280
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G Q + I LP I++A + + ++A ++G++ ++ +
Sbjct: 25 AQPAKLAIVIDDIGYHQKEDAQ-IYALPKEISVAIIPSAPHARQRNEQAYQQGRDILIHM 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ S+ ++ L V + + R++ + + G+ N+ G+ ++ E
Sbjct: 84 PMQPL--SHQRIEAGGLHVGMRQEDVQQRVQTAKAIVSHAIGMNNHMGSAATADAELMHK 141
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADL----YLDDQVDRDKIREKLKG 343
+ +E + L F D R + R +A K+ Y V L +LDD+ + + +
Sbjct: 142 LMQELKVQDLFFLDS----RTIGRSVAGKIAKEYGVQSLDRHIFLDDKDTYADVERQFQR 197
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
A+ G AI + ++ V+ L+
Sbjct: 198 AVHYAQKHGTAIAIGHPRKNTVAVLQAGLKH 228
>gi|52426374|ref|YP_089511.1| hypothetical protein MS2319 [Mannheimia succiniciproducens MBEL55E]
gi|52308426|gb|AAU38926.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 281
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ LG AI +P I++A + + + A ++G++ ++ +
Sbjct: 26 AFSAKLAIVIDDLGY-HPREDAAILAMPKEISVAIIPSAPYARQRNQLAYEQGRDILIHM 84
Query: 228 PMQAFDESYNEDDSYTL-----KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
PMQ + E ++ +V VQQ N + +++ G+ N+ G+ +++
Sbjct: 85 PMQPISQMNIEAGGLSIGMDAQQVAHNVQQAKNIVSHAI-------GMNNHMGSAATADR 137
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ E K+ L F D + R++ +A + + + ++LDD ++ + +
Sbjct: 138 PLMTELMAELRKQHLFFLDSRTIGRSVAEKIAKESGVRALQRHIFLDDSDVYGDVQRQFQ 197
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWL 372
AR G AI + ++ V+ Q L
Sbjct: 198 QAIHYARKHGTAIVIGHPRKNTVAVLRQGL 227
>gi|121997999|ref|YP_001002786.1| hypothetical protein Hhal_1209 [Halorhodospira halophila SL1]
gi|121589404|gb|ABM61984.1| protein of unknown function DUF610, YibQ [Halorhodospira halophila
SL1]
Length = 272
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 136 ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLP 195
+L L LA++ G E P + +G A+++ +G R+I+L
Sbjct: 12 LLLLWSAPALAQDPGGAEWMPFPTPE---VDPPAGRPAALIIDDIGDDWAAGVRSIDLA- 67
Query: 196 ANIT---LAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQ 252
+T L +G SL + A ++G E +L +PM+A + + + L + + +Q
Sbjct: 68 EGVTISVLPHTPHGRSL---AERAHERGHEVMLHLPMEAKNGADPGPGALFLDMDE--EQ 122
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF-DDGSSPRNLTR 311
+ + +L+ GV N+ G+++ + + +E A R L+F D +S R++ +
Sbjct: 123 VRKTIARALKSVPHAAGVNNHMGSLITRHPGHMTWLMEELAAREDLYFIDSRTSARSVAQ 182
Query: 312 VLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQW 371
+A + + V ++LD + D + I E+ + +A+ AI + + E+++++ +
Sbjct: 183 QMAEEHGVDNAVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLEEE 242
Query: 372 LQQEHVRDVSVVPLSCL 388
L + R V++VP S L
Sbjct: 243 LPRLRERGVALVPASEL 259
>gi|312898727|ref|ZP_07758116.1| divergent polysaccharide deacetylase [Megasphaera micronuciformis
F0359]
gi|310620158|gb|EFQ03729.1| divergent polysaccharide deacetylase [Megasphaera micronuciformis
F0359]
Length = 425
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
AR+A+V+ G S N LP ++T A + + G + I+ +PM+
Sbjct: 210 ARLAVVIDDCG-SNMEVLEGYNALPIHLTYAVMPFKSHTIDSAESGHNAGNKIIVHLPME 268
Query: 231 AFDESYNED-----DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+ +E+ D KV T +L++++ Y++ G+ N++G+ ++
Sbjct: 269 PLNTVSSEEIFISSDMGDKKVIATTNELIDQVPYAV-------GINNHQGSKSTADTRLM 321
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + RGL+F D ++ ++ A + + +L++D+ I+E+++
Sbjct: 322 KDVMSVLKSRGLVFLDSRTTAASVAEQTAASMGVGTTRNNLFIDNDPSVSAIKERIRQAG 381
Query: 346 EIARTTGQAIGVA 358
+A G A+ +
Sbjct: 382 RLALKNGTAVTIG 394
>gi|51892007|ref|YP_074698.1| hypothetical protein STH869 [Symbiobacterium thermophilum IAM
14863]
gi|51855696|dbj|BAD39854.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 252
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 10/222 (4%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIV+ L G + + L P +T A + + G E IL +PM A
Sbjct: 28 LAIVIDDLTTGAPGLEEMLRL-PYPLTFAILPDRPDAGALARRIAALGHEVILHLPMDAG 86
Query: 233 D---ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + Y + + + +QQL++ ++ G + N+ G + ++ +
Sbjct: 87 EVDPQWYVGRPISSRQSDEEIQQLVSEWLAAVPEARG---MNNHMGTVATQDERVVRAVL 143
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + G D ++ + A ++ +P M L+LD + + + +L L E A
Sbjct: 144 EVARRHGKYILDSMTTENTVVPRTAVEMGVPCMQRSLFLDHENGEEVVAAQLYKLAEWAE 203
Query: 350 TTGQAIG---VAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
T G AIG V V + + +++ L + R + +V LS L
Sbjct: 204 THGAAIGIGHVGVGREGTAAALAEVLPELEARGIRLVTLSQL 245
>gi|224417738|ref|ZP_03655744.1| putative periplasmic protein [Helicobacter canadensis MIT 98-5491]
gi|253827082|ref|ZP_04869967.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141280|ref|ZP_07803473.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510488|gb|EES89147.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130311|gb|EFR47928.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 367
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 224 ILQIPMQAFDESYNE------DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
++ +P++A + E DDS QT+Q + ++ T + N+ G+
Sbjct: 193 MVHLPLEALNFYQKEHLWLFSDDS-----KQTIQDRIQAIKKDFPNLTY---INNHTGSK 244
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPR---------NLTRVLAPKLNLPYMVADLYL 328
N ++ + + + + F D ++P+ N T+ L P N P++ +++L
Sbjct: 245 FTQNLQAMQNLLTILNENNITFVDSRTTPKTKTALYYKNNPTKSLNPCQNTPFLERNVFL 304
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI---SQWLQQEHVRDVSV 382
D+++D KI + L E A+ G AI + E+I + S++LQ+ + V +
Sbjct: 305 DNELDISKITQNLIKAIETAKIKGYAIAIGHPHKETILALKNASEYLQKSGIEAVYI 361
>gi|257460562|ref|ZP_05625663.1| divergent polysaccharide deacetylase family protein [Campylobacter
gracilis RM3268]
gi|257441893|gb|EEV17035.1| divergent polysaccharide deacetylase family protein [Campylobacter
gracilis RM3268]
Length = 401
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAF------ASNGNSLDRWMKEAKKKGQE 222
S A++AI++ +G + + I LP +T + + SL R +
Sbjct: 185 SRAKLAIIIDDVGTDEQAQK--IAALPVRVTPSIFPPEYQRKDTRSLARGF-------EH 235
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQL---LNRLRYSLRRGTGYFGVMNYRGAMLL 279
+ +PM+A S +++S TL+ + ++L + +LR F + N+ G+
Sbjct: 236 YAIHLPMEA---SSAKNNSATLRASDNYEKLRGVIAKLRADF--PNAKF-INNHTGSKFT 289
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+++ + + + + + G LF D +SP + + Y+ D++LD+Q +R+
Sbjct: 290 ADERAMQNLLRAMNEHGFLFIDSRTSPATKAKAAMNGFGMRYVHRDVFLDNQNSVAAVRK 349
Query: 340 KLKGLEEIARTTGQAIGV 357
KL+ +A+ G AI +
Sbjct: 350 KLREAVALAKKQGYAIAI 367
>gi|283787753|ref|YP_003367618.1| polysaccharide deacetylase [Citrobacter rodentium ICC168]
gi|282951207|emb|CBG90900.1| putative polysaccharide deacetylase [Citrobacter rodentium ICC168]
Length = 270
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A N +A G E ++ +PM + E D TL+ + ++
Sbjct: 1 MPDAISVAVLPNAPHAREMAAKAHSSGHEVLIHLPMAPLSKQPLEKD--TLRPEMSSDEI 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ + G+ N+ G+ + S+ + + + + L F D + +
Sbjct: 59 ERIIREAVSKVPYAVGLNNHMGSAMTSSLFGMQKVMQALERYELYFLDSMTIGNSQAMRA 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + E+AR+ G AI + ++ V+ Q
Sbjct: 119 ASGTGVKVIKRKVFLDDTQNEADIRRQFNRAIELARSNGSAIAIGHPHPSTVRVLQQ 175
>gi|145630498|ref|ZP_01786278.1| hypothetical protein CGSHi22421_04483 [Haemophilus influenzae
R3021]
gi|144983888|gb|EDJ91330.1| hypothetical protein CGSHi22421_04483 [Haemophilus influenzae
R3021]
Length = 280
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPHARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + L + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGLRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRPNTIAVLQAGLR 227
>gi|300714671|ref|YP_003739474.1| conserved uncharacterized protein YigQ [Erwinia billingiae Eb661]
gi|299060507|emb|CAX57614.1| conserved uncharacterized protein YigQ [Erwinia billingiae Eb661]
Length = 302
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
C+ +G +++IV+ G + + + P NI++A N +A + G E +
Sbjct: 12 CTAHAG-KLSIVIDDFGYRPKEENQVLQM-PKNISVAVLPNATHAREMATKAHQLGHEVL 69
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 70 IHLPMAPLSKQPLEKD--TLRPDMSSSEIARIIREAVADVPFAVGLNNHMGSAMTSSLPG 127
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + F D + + + A ++ + ++LDD + IR++
Sbjct: 128 MQKVMQVLDHYNFYFLDSMTIGNSQSTRAAAGTSVKVLKRRVFLDDTQNEADIRKQFTRA 187
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWL 372
+A+ G AI + ++ V+ + L
Sbjct: 188 VRLAQRDGSAIAIGHPHPTTVRVLQEML 215
>gi|319775305|ref|YP_004137793.1| hypothetical protein HICON_06450 [Haemophilus influenzae F3047]
gi|317449896|emb|CBY86108.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 280
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PISAIKIEDGG--LHLGMSAAQVNDRVNTAKSIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFSDVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRQNTIAVLQAGLR 227
>gi|219870484|ref|YP_002474859.1| hypothetical protein HAPS_0219 [Haemophilus parasuis SH0165]
gi|219690688|gb|ACL31911.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 281
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 14/232 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++ IV+ +G + AI LP + +A + +AK++G+E
Sbjct: 21 FAPLAYANKLVIVIDDIGY-RIKEDNAIYTLPKEVNVAIIPSAPYATARANKAKEQGREI 79
Query: 224 ILQIPMQAFDESYNEDDSYTL-----KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
++ +PMQ + E + + +V++ + Q ++ Y++ + N+ G+
Sbjct: 80 LIHLPMQPKVKQPIEAGALLVGMGESEVSELIHQAQQQVPYAI-------ALNNHMGSKA 132
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++K + + + K +++GL F D ++ ++ A L + ++LD+ ++
Sbjct: 133 TADKTTMQHLMKALSQQGLGFLDSKTAGDSVAYQTAKAYGLNALERHIFLDNSDVFADVQ 192
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ + + AR G AI + SI V+ Q + D+ +V LS L K
Sbjct: 193 RQFQHAVQYARKHGIAIMIGHPRKHSIAVLEQGIANLPA-DIQLVSLSSLWK 243
>gi|217967182|ref|YP_002352688.1| protein of unknown function DUF610 YibQ [Dictyoglomus turgidum DSM
6724]
gi|217336281|gb|ACK42074.1| protein of unknown function DUF610 YibQ [Dictyoglomus turgidum DSM
6724]
Length = 391
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 218 KKGQEAILQIPMQAFDESYNEDDSY----TLKVTQTVQQLLNRLRYSLRRGTGYFG---- 269
++G E ++ +PM++ +Y +D Y + V ++ N +R L+R FG
Sbjct: 202 ERGWEIMMHLPMESI--TYPKDAKYLVAEAIMVGMNEDEIDNIVRTHLKR----FGNIKV 255
Query: 270 --VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
V N+ G+ + + E+ E + F K L F D + ++ +A +P + L+
Sbjct: 256 SWVNNHMGSKVTKDPETMEKVINVFKKYNLAFLDSKTILGSVAYKMANSSGIPSLENMLF 315
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+D + D +KIR + +A++ G + + ++I+V+ + ++ DV +V +S
Sbjct: 316 IDHENDENKIRLRFLKAINMAKSKGWGVFILHLRPKTIKVLKELEKEGFFADVDLVKISD 375
Query: 388 L 388
L
Sbjct: 376 L 376
>gi|194431299|ref|ZP_03063592.1| polysaccharide deacetylase family protein [Shigella dysenteriae
1012]
gi|194420754|gb|EDX36830.1| polysaccharide deacetylase family protein [Shigella dysenteriae
1012]
gi|320179953|gb|EFW54895.1| putative divergent polysaccharide deacetylase [Shigella boydii ATCC
9905]
gi|332084497|gb|EGI89692.1| divergent polysaccharide deacetylase family protein [Shigella
dysenteriae 155-74]
gi|332084797|gb|EGI89980.1| divergent polysaccharide deacetylase family protein [Shigella
boydii 5216-82]
Length = 319
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ A+ L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALARYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|253701628|ref|YP_003022817.1| hypothetical protein GM21_3030 [Geobacter sp. M21]
gi|251776478|gb|ACT19059.1| protein of unknown function DUF610 YibQ [Geobacter sp. M21]
Length = 316
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 8/225 (3%)
Query: 155 TEVPAMDKNFCS--NASG-ARIAIVVSGLGIS--QTGTQRAINLLPANITLAFASNGNSL 209
+VPA + + A G R+AI++ +G S + T ++I L IT + +
Sbjct: 79 AQVPAPKPHAAALPKAHGPGRVAIIIDDMGSSMQELQTLQSIGL---PITYSIIPSLPRA 135
Query: 210 DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFG 269
+ A G E ++ +PM+ + +S L V ++ R+ R G
Sbjct: 136 RQVADSAHAAGAEVMVHMPMEPEGYPKQKMESIGLLVAMDDAEIAKRVSGYFSRVPHAVG 195
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
N+ G+ + + E ++G+ F D +SP ++ A L + ++LD
Sbjct: 196 ANNHMGSRFTQHGDKMEAALGVLKEKGVFFIDSRTSPASVGYRTARALGMKAGTRQVFLD 255
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
+ D I +L +AR G AI + ++ + +L +
Sbjct: 256 NVQDEGAIGRQLFEAAAVARKRGGAIAICHPHPATLRALKAYLPE 300
>gi|146309788|ref|YP_001174862.1| protein of unknown function DUF610, YibQ [Enterobacter sp. 638]
gi|145316664|gb|ABP58811.1| protein of unknown function DUF610, YibQ [Enterobacter sp. 638]
Length = 314
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 84/209 (40%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S ++AIV+ G + + + +P I++A N +A G E
Sbjct: 17 LASPVYAGKLAIVIDDFGY-RPHNENQVLAMPTAISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R + + G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIRDAYGKVPFAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + + + + + ++LDD + IR +
Sbjct: 134 GMQKVMQALERYNLYFLDSMTIGNSQALRASQGTGVKVIKRKVFLDDTQNDADIRAQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
++AR G AI + ++ V+ Q L
Sbjct: 194 AVQLARRNGSAIAIGHPHPSTVRVLQQML 222
>gi|323975163|gb|EGB70268.1| divergent polysaccharide deacetylase [Escherichia coli TW10509]
Length = 319
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ A+ L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALARYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|313681712|ref|YP_004059450.1| hypothetical protein Sulku_0584 [Sulfuricurvum kujiense DSM 16994]
gi|313154572|gb|ADR33250.1| protein of unknown function DUF610 YibQ [Sulfuricurvum kujiense DSM
16994]
Length = 344
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
AK++G ++ +P++A ++++++ TL++ T +++ RL + + N+ G
Sbjct: 177 AKQQGT-YMVHLPLEAV--AFHDEEPNTLRIGSTEEEIEKRLDALKQLYPNVHYINNHTG 233
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ S+ + + + + K GL F D + + R K + Y+ D++LDDQ
Sbjct: 234 SKFTSDSAAMDKLIRIMKKEGLQFVDSRTIGTSKGREATEKHGMRYLTRDVFLDDQDGVG 293
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
++++++ E A+ G AI + ++I+ + +
Sbjct: 294 NVKKQIRDAVEKAKRYGTAIAIGHPRKDTIQALKE 328
>gi|242237635|ref|YP_002985816.1| hypothetical protein Dd703_0176 [Dickeya dadantii Ech703]
gi|242129692|gb|ACS83994.1| protein of unknown function DUF610 YibQ [Dickeya dadantii Ech703]
Length = 319
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A N +A +G+E ++ +PM + E D TL+ + +++
Sbjct: 46 MPVAISVAVLPNAPYARDMATKAHAQGREVLIHLPMAPMSKQPLERD--TLRPDMSSEEI 103
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
LR ++ + G+ N+ G+ + ++ + + + L F D + +
Sbjct: 104 ARILRDAVGKVPYAVGLNNHMGSAMTASLPGMQKVMQAMTTYRLYFLDSMTIGSSQASRA 163
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
A + + ++LDD + IR + E+AR G AI + +I+V+ Q L
Sbjct: 164 AAGTGIRVLKRKVFLDDTQNTADIRRQFNRAVELARRDGVAIAIGHPHPTTIQVLQQML 222
>gi|170767013|ref|ZP_02901466.1| polysaccharide deacetylase family protein [Escherichia albertii
TW07627]
gi|170124451|gb|EDS93382.1| polysaccharide deacetylase family protein [Escherichia albertii
TW07627]
Length = 319
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 3/201 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ A+ L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALARYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQ 370
G I + ++ V+ Q
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQ 220
>gi|145628360|ref|ZP_01784161.1| hypothetical protein CGSHi22121_04945 [Haemophilus influenzae
22.1-21]
gi|144980135|gb|EDJ89794.1| hypothetical protein CGSHi22121_04945 [Haemophilus influenzae
22.1-21]
Length = 280
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L +++ Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGGLHLGMSEA--QVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWL 372
G AI + +I V+ L
Sbjct: 205 HGSAIAIGHPRANTIAVLQAGL 226
>gi|68249351|ref|YP_248463.1| hypothetical protein NTHI0914 [Haemophilus influenzae 86-028NP]
gi|145632108|ref|ZP_01787843.1| hypothetical protein CGSHi3655_06634 [Haemophilus influenzae 3655]
gi|68057550|gb|AAX87803.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144987015|gb|EDJ93545.1| hypothetical protein CGSHi3655_06634 [Haemophilus influenzae 3655]
Length = 280
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRQNTIAVLQAGLR 227
>gi|149180684|ref|ZP_01859187.1| hypothetical protein BSG1_12141 [Bacillus sp. SG-1]
gi|148851474|gb|EDL65621.1| hypothetical protein BSG1_12141 [Bacillus sp. SG-1]
Length = 262
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/158 (18%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
++IV+ G + GT+ + L P ++T+A ++ A + G E I+ +PM+
Sbjct: 34 LSIVIDDFGNNMEGTKEMLEL-PISLTVAVMPLMDTTKEDADLAHRLGHEVIVHMPMEPL 92
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + + +++ R+ ++ G+ ++ G+ +++ V+
Sbjct: 93 KGKRSWLGPGAITTDLSNEEIRKRVEAAIDSVPFAVGMNHHMGSRASADERVMRVVLTVC 152
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+RGL + D ++P+++ LA ++ +P + +++ DD
Sbjct: 153 KERGLYYLDSRTTPKSVIPELAEEIGVPLLENEMFFDD 190
>gi|260581569|ref|ZP_05849366.1| conserved hypothetical protein [Haemophilus influenzae NT127]
gi|260095162|gb|EEW79053.1| conserved hypothetical protein [Haemophilus influenzae NT127]
Length = 281
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 87
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 145
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 205
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 206 HGSAIAIGHPRQNTIAVLQAGLR 228
>gi|240949054|ref|ZP_04753405.1| hypothetical protein AM305_09111 [Actinobacillus minor NM305]
gi|240296527|gb|EER47152.1| hypothetical protein AM305_09111 [Actinobacillus minor NM305]
Length = 264
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G S QR + LP I++A + + A + ++ ++ +
Sbjct: 7 AQAAKLAIVIDDIGYSVREDQR-VYQLPKEISVAIIPSAPYAKVRAENAFAQKRDILIHL 65
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + + L V + + L + + G+ N+ G+ ++K +
Sbjct: 66 PMQP-QNAQQAIEKPALLVGDDFAKAQSLLENARQHVPYAIGLNNHMGSGATADKATMRH 124
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ A + L F D + P T+V A + + + ++LDD + + + + + +
Sbjct: 125 FMQALAAQKLFFLDSKTGPSVATKVAA-EFGINALERHVFLDDSNEYNDVMHQFQQAKAY 183
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQ 373
AR G AI + SI+V+ + L+
Sbjct: 184 ARKHGVAILIGHPRKNSIDVLEKELK 209
>gi|329122701|ref|ZP_08251279.1| divergent polysaccharide deacetylase superfamily protein
[Haemophilus aegyptius ATCC 11116]
gi|327472575|gb|EGF18005.1| divergent polysaccharide deacetylase superfamily protein
[Haemophilus aegyptius ATCC 11116]
Length = 280
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRPNTIAVLQAGLR 227
>gi|296100521|ref|YP_003610667.1| hypothetical protein ECL_00150 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295054980|gb|ADF59718.1| hypothetical protein ECL_00150 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 310
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +PA I++A N +A G + ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHYENQVLAMPAAISVAVLPNAPHAREMATKAHNSGHQVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + ++ +R + + G+ N+ G+ + S+ +
Sbjct: 82 APISKQPLEKD--TLRPEMSSDEIDRIIRDAYNKVPYAVGLNNHMGSAMTSSLYGMLKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSMTIGNSQAMRAAQGTGVKVIKRKVFLDDTQNEADIRVQFNRAVQLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G AI + ++ V+ Q L
Sbjct: 200 RNGSAIAIGHPHPSTVRVLQQML 222
>gi|229844623|ref|ZP_04464762.1| hypothetical protein CGSHi6P18H1_03404 [Haemophilus influenzae
6P18H1]
gi|229812337|gb|EEP48027.1| hypothetical protein CGSHi6P18H1_03404 [Haemophilus influenzae
6P18H1]
Length = 280
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARVRNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + I+ + K AR
Sbjct: 145 ALQEKHLFFLDSRTVGKSVAGKVAKEQGVRSLDRHIFLDDSNEFADIQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGTAIAIGHPRPNTIAVLQAGLR 227
>gi|291287716|ref|YP_003504532.1| hypothetical protein Dacet_1812 [Denitrovibrio acetiphilus DSM
12809]
gi|290884876|gb|ADD68576.1| protein of unknown function DUF610 YibQ [Denitrovibrio acetiphilus
DSM 12809]
Length = 399
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 10/223 (4%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IA V+ G S+ ++ + P +T+A + + + A K G+ L PMQ
Sbjct: 181 IAFVIDDCGYSEELAEK-LAAFPYPMTMAIIPHTEYAKKTAEIAYKAGKVVFLHQPMQPL 239
Query: 233 DESYNEDDSYTLKV-----TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
SY + D V + +Q LN SL G G N+ G+ + ++E +
Sbjct: 240 --SYPKTDPGKGAVLLNMPEKIIQTSLNSNVASL--GGKIDGFNNHMGSAITQDREKMKQ 295
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+FK K F D +S + + + ++D++ D IR K+ EI
Sbjct: 296 VFKVMKKYTDTFLDSYTSRDTVAFDQCKAEGMKCAINRKFIDNESDYSYIRSKIIEGAEI 355
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
ART G I + + ++ + + L + ++VP++ L +
Sbjct: 356 ARTDGSVIMIGHLRESTVHALEKILPELEKAGYNIVPVTELTQ 398
>gi|157414912|ref|YP_001482168.1| hypothetical protein C8J_0592 [Campylobacter jejuni subsp. jejuni
81116]
gi|157385876|gb|ABV52191.1| hypothetical protein C8J_0592 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747550|gb|ADN90820.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
M1]
Length = 360
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +LN+PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++++ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQIQNAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKSVDLVYLS 355
>gi|320539186|ref|ZP_08038857.1| putative polysaccharide deacetylase [Serratia symbiotica str.
Tucson]
gi|320030824|gb|EFW12832.1| putative polysaccharide deacetylase [Serratia symbiotica str.
Tucson]
Length = 278
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+++IV+ +G + A+ +P +++A N A + +E ++ +PM
Sbjct: 23 AGKLSIVIDDVGY-HPHEENAVLQMPEAVSVAVLPNAPYARLMATRAHSQNREVLIHMPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
F + E D TL+ + + + +R ++ G+ N+ G+ + S+ + +
Sbjct: 82 APFSKQPLEQD--TLQPDMSSENIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ L F D + + A + + ++LDD + IR + +AR
Sbjct: 140 QALTSYRLYFLDSLTISNSQATRAAIGTGVKVIKRKVFLDDTANEADIRHQFNRAVALAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G AI + +++V+ Q L
Sbjct: 200 RNGSAIAIGHPRPATVKVLQQML 222
>gi|145634834|ref|ZP_01790542.1| hypothetical protein CGSHiAA_04498 [Haemophilus influenzae PittAA]
gi|145640840|ref|ZP_01796422.1| hypothetical protein CGSHiR3021_07222 [Haemophilus influenzae
R3021]
gi|148826600|ref|YP_001291353.1| hypothetical protein CGSHiEE_08325 [Haemophilus influenzae PittEE]
gi|145268000|gb|EDK07996.1| hypothetical protein CGSHiAA_04498 [Haemophilus influenzae PittAA]
gi|145274354|gb|EDK14218.1| hypothetical protein CGSHiR3021_07222 [Haemophilus influenzae
22.4-21]
gi|148716760|gb|ABQ98970.1| hypothetical protein CGSHiEE_08325 [Haemophilus influenzae PittEE]
gi|309973749|gb|ADO96950.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 280
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWL 372
G AI + +I V+ L
Sbjct: 205 HGSAIAIGHPRANTIAVLQAGL 226
>gi|223039675|ref|ZP_03609961.1| divergent polysaccharide deacetylase family [Campylobacter rectus
RM3267]
gi|222879058|gb|EEF14153.1| divergent polysaccharide deacetylase family [Campylobacter rectus
RM3267]
Length = 549
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQA + + TL + +++ +L+ R + N+ G+ S+
Sbjct: 387 MIHLPMQALG-GFKGAEIGTLTINDDYEKIAKKLQSIKRDFPDLKYINNHTGSRFTSDAA 445
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L+F D ++ A K ++PY+ D++LD + +R++LK
Sbjct: 446 AMDRLMRAVRDENLIFVDSKTTSPTKVYGAAKKYSMPYIARDVFLDHDGSKAAVRKQLKY 505
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
E+A+ AI + ++EV+ + + +++V +V L L
Sbjct: 506 AVELAKKRSYAIAIGHPHKNTLEVLRESAKL--LQEVEIVYLKDL 548
>gi|291288857|ref|YP_003505673.1| hypothetical protein Dacet_2967 [Denitrovibrio acetiphilus DSM
12809]
gi|290886017|gb|ADD69717.1| protein of unknown function DUF610 YibQ [Denitrovibrio acetiphilus
DSM 12809]
Length = 431
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQT-GTQRAINLLPANIT-LAFASNGNSLDRWMK 214
+P K F A++A+V+ G S + Q A PA + F G
Sbjct: 195 IPPAKKTF-----KAKLAVVIDDCGYSMSLAKQLAALQYPATFAVIPFTPYGKETALL-- 247
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDD----SYTLKVTQTVQQLLNRLRYSLRRGTGYF-- 268
A+K G+ L PMQ SY + D + L + +TV + + + YF
Sbjct: 248 -ARKAGKPVFLHFPMQP--RSYPKFDPGKGALFLNMPETVIAAVTKANFD------YFPI 298
Query: 269 ---GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVAD 325
G N+ G+ ++E E KE +K F D +S + + + L D
Sbjct: 299 KLDGANNHTGSAFTESREKMEQALKEISKYTPGFLDSHTSRATVAYDVCKETTLKCGRND 358
Query: 326 LYLDDQ--------VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHV 377
++LD++ R+ + + L + A G AI + ++I V+ +Q
Sbjct: 359 IFLDNEEPGLVTKSAKRNHVHDVLMQAAKKALANGSAIAIGHLRKDTISVLENSFRQIEE 418
Query: 378 RDVSVVPLSCL 388
V +VP++ L
Sbjct: 419 MGVEIVPVTSL 429
>gi|297519266|ref|ZP_06937652.1| putative polysaccharide deacetylase [Escherichia coli OP50]
Length = 319
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 3/208 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A ++AIV+ G + + + +P+ I++A + +A G E +
Sbjct: 18 SSPALAGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E + TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWL 372
++AR G I + ++ V+ Q +
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMV 222
>gi|188532247|ref|YP_001906044.1| Putative periplasmic protein of unknown function [Erwinia
tasmaniensis Et1/99]
gi|188027289|emb|CAO95132.1| Putative periplasmic protein of unknown function [Erwinia
tasmaniensis Et1/99]
Length = 310
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 3/209 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A ++IV+ G T Q+ + + PA I++A N +A + G E
Sbjct: 18 ITSPAWAGNLSIVIDDFGYRPTQEQQVLQM-PAAISVAVLPNAPHAREMATKAHQSGHEV 76
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R + G+ N+ G+ + S+
Sbjct: 77 LIHLPMAPLSKQPLEKD--TLRPDMSAEEIARIIREAAAAVPYAVGLNNHMGSAMTSSLP 134
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + F D + + A + + ++LDD + IR +
Sbjct: 135 GMQKVMQVLSHYNFYFLDSMTIGNSQASRAAAGTGVKVVKRRVFLDDSQNEADIRVQFAR 194
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A+ G AI + ++ V+ Q L
Sbjct: 195 AVHLAQRDGSAIAIGHPHPSTVRVLQQML 223
>gi|261341775|ref|ZP_05969633.1| hypothetical protein ENTCAN_08255 [Enterobacter cancerogenus ATCC
35316]
gi|288316144|gb|EFC55082.1| YibQ protein product [Enterobacter cancerogenus ATCC 35316]
Length = 304
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A N +A G + ++ +PM
Sbjct: 17 AGKLAIVIDDFGY-RPHYENQVLAMPSAISVAVLPNAPHAREMATKAHNSGHQVLIHLPM 75
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + ++ +R + + G+ N+ G+ + S+ +
Sbjct: 76 APLSKQPLEKD--TLRPEMSSDEIDRIIRDAYNKVPYAVGLNNHMGSAMTSSLYGMLKVM 133
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + + A + + ++LDD + IR + ++AR
Sbjct: 134 QSLERYNLYFLDSMTIGNSQAMRAAQGTGVKVIKRKVFLDDTQNEADIRVQFNRAVQLAR 193
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G AI + ++ V+ Q L
Sbjct: 194 RNGSAIAIGHPHPSTVRVLQQML 216
>gi|218562283|ref|YP_002344062.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|112359989|emb|CAL34778.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
Length = 360
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ + +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMKKLYEALKNQNIFFVDSKTIGNSKANKIAKELSIPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLENAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|255321385|ref|ZP_05362545.1| ferric-uptake regulator [Campylobacter showae RM3277]
gi|255301538|gb|EET80795.1| ferric-uptake regulator [Campylobacter showae RM3277]
Length = 545
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQA + + TL V +++ +L+ R + N+ G+ S+
Sbjct: 383 MIHLPMQALG-GFKGAEIGTLTVDDDYEKIAKKLQSIKRDFPNLKYINNHTGSRFTSDAA 441
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L+F D ++ A K ++PY+ D++LD + +R++LK
Sbjct: 442 AMDRMMRAVRDENLIFVDSKTTSPTKVYGAAKKYSMPYIARDVFLDHDGSKAAVRKQLKY 501
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++A+ AI + ++EV+ + + +++V VV L L
Sbjct: 502 AVKLAKNRSYAIAIGHPHKNTLEVLQESAKL--LQEVEVVYLKDL 544
>gi|319897746|ref|YP_004135943.1| hypothetical protein HIBPF15550 [Haemophilus influenzae F3031]
gi|317433252|emb|CBY81627.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 280
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARVRNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGTAIAIGHPRPNTIAVLQAGLR 227
>gi|323166902|gb|EFZ52641.1| divergent polysaccharide deacetylase family protein [Shigella
sonnei 53G]
Length = 319
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPNNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|260579846|ref|ZP_05847676.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260093130|gb|EEW77063.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 281
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 87
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 145
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 205
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 206 HGSAIAIGHPRPNTIAVLQAGLR 228
>gi|118475284|ref|YP_892284.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
gi|118414510|gb|ABK82930.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
Length = 387
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P++A NE + TL V T ++ NR+ ++ + N+ G+ S+
Sbjct: 221 MVHLPLEAIFFKKNEQN--TLNVGDTKDKIENRISTIKKQFGNVSYINNHTGSKFTSDYS 278
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
S +++ K +LF D +S + + + ++ L Y+ D+++D+ I ++L+
Sbjct: 279 SMKMLLKSMKNHNILFVDSLTSKGSKAKQVTKEMGLKYVFRDVFIDNDQSSVAIFKQLEI 338
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
+ A+ G AI + + + E I + ++ ++DV VV L
Sbjct: 339 AIKKAKKNGFAIAIGHPYKVTFETI-KVAKKTILKDVEVVYL 379
>gi|322418639|ref|YP_004197862.1| hypothetical protein GM18_1111 [Geobacter sp. M18]
gi|320125026|gb|ADW12586.1| protein of unknown function DUF610 YibQ [Geobacter sp. M18]
Length = 318
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 65/151 (43%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+ + +S + V ++ +R++ R G N+ G+ + +
Sbjct: 152 MIHMPMEPEGYPKQKLESIGVLVAMNDGEIADRIKSYFRTVPYAVGANNHMGSRFTQHAD 211
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+V+ + ++GL F D +SP ++ A + L ++LD+ D I +L
Sbjct: 212 KMQVVLQVLKEKGLFFVDSKTSPASVGYSEARGMGLKCASRQVFLDNVQDEAAIGRQLAQ 271
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
IAR G AI + ++ + ++ +
Sbjct: 272 AAAIARKKGAAIAICHPHPATLRALKLYMPE 302
>gi|145638449|ref|ZP_01794059.1| hypothetical protein CGSHiII_06744 [Haemophilus influenzae PittII]
gi|145272778|gb|EDK12685.1| hypothetical protein CGSHiII_06744 [Haemophilus influenzae PittII]
gi|309751584|gb|ADO81568.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 280
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRQNTIAVLQAGLR 227
>gi|48243737|gb|AAT40842.1| hypothetical protein [Haemophilus influenzae]
Length = 280
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRQNTIAVLQAGLR 227
>gi|327482780|gb|AEA86090.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 263
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 10/210 (4%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
D+ + S + +++ LG + +R + L P + LA + ++A + G
Sbjct: 27 DRRVAARPS---LTLIIDDLGQNPARDRRVLQL-PGPVALAILPDTRHAAELAEQAHRAG 82
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
+ +L +PM + +R G+ N+ G+ +
Sbjct: 83 KTVMLHMPMAPAGGRFAWHPQLPHDELARRLDAALAAVPHVR------GLNNHMGSAMTE 136
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
++ + E +R L F D +SPR + A + L + D++LDD + E+
Sbjct: 137 QPQAMTWLMGELQRRHLFFLDSRTSPRTVAAASAQRTALASLSRDIFLDDDPSPAAVAER 196
Query: 341 LKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
+ +AR G + + + ++ ++ +
Sbjct: 197 FQAAIALARKQGSVVIIGHPHESTLALLER 226
>gi|283956047|ref|ZP_06373534.1| LOW QUALITY PROTEIN: hypothetical protein C1336_000100100
[Campylobacter jejuni subsp. jejuni 1336]
gi|283792367|gb|EFC31149.1| LOW QUALITY PROTEIN: hypothetical protein C1336_000100100
[Campylobacter jejuni subsp. jejuni 1336]
Length = 360
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLQSAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|30995399|ref|NP_438914.2| hypothetical protein HI0755 [Haemophilus influenzae Rd KW20]
gi|1176306|sp|P44863|Y755_HAEIN RecName: Full=Uncharacterized protein HI_0755; Flags: Precursor
Length = 280
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRPNTIAVLQAGLR 227
>gi|88597070|ref|ZP_01100306.1| conserved domain protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|88190759|gb|EAQ94732.1| conserved domain protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|284925893|gb|ADC28245.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 360
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|301169472|emb|CBW29073.1| predicted polysaccharide deacetylase [Haemophilus influenzae 10810]
Length = 280
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRPNTIAVLQAGLR 227
>gi|145636690|ref|ZP_01792357.1| hypothetical protein CGSHiHH_03778 [Haemophilus influenzae PittHH]
gi|229845802|ref|ZP_04465914.1| hypothetical protein CGSHi7P49H1_03098 [Haemophilus influenzae
7P49H1]
gi|145270216|gb|EDK10152.1| hypothetical protein CGSHiHH_03778 [Haemophilus influenzae PittHH]
gi|229810806|gb|EEP46523.1| hypothetical protein CGSHi7P49H1_03098 [Haemophilus influenzae
7P49H1]
Length = 280
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 28 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 87 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 145 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 205 HGSAIAIGHPRPNTIAVLQAGLR 227
>gi|148827945|ref|YP_001292698.1| hypothetical protein CGSHiGG_07270 [Haemophilus influenzae PittGG]
gi|148719187|gb|ABR00315.1| hypothetical protein CGSHiGG_07270 [Haemophilus influenzae PittGG]
Length = 280
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + A+ +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAVFAMPREISVAIIPAAPYARVRNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 ISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLR 227
>gi|312170645|emb|CBX78908.1| Uncharacterized protein yibQ precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 308
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G Q+ + + PA I++A + +A + G E ++ +PM
Sbjct: 24 KLSIVIDDFGYRPAQEQQVLQM-PAAISVAVLPHAPHAREMATKAHQSGHEVLIHLPMAP 82
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + +++ +R + G+ N+ G+ + S+ + + +
Sbjct: 83 LSKQPLEKD--TLRPDMSTEEIGRIIREAAATVPYAVGLNNHMGSAMTSSLPGMQKVMRV 140
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
F D + + A ++ + ++LDD + IR + +A+
Sbjct: 141 LNHYQFYFLDSMTIGNSQATRAAAGTSVKVVKRRVFLDDSQNEADIRVQFTRAVRLAQRD 200
Query: 352 GQAIGVAVAFDESIEVISQWL 372
G AI + ++ V+ Q L
Sbjct: 201 GSAIAIGHPHPSTVRVLQQML 221
>gi|26250262|ref|NP_756302.1| hypothetical protein c4440 [Escherichia coli CFT073]
gi|91213132|ref|YP_543118.1| hypothetical protein UTI89_C4159 [Escherichia coli UTI89]
gi|218560689|ref|YP_002393602.1| polysaccharide deacetylase [Escherichia coli S88]
gi|227883784|ref|ZP_04001589.1| divergent polysaccharide deacetylase [Escherichia coli 83972]
gi|237703387|ref|ZP_04533868.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300984983|ref|ZP_07177235.1| divergent polysaccharide deacetylase [Escherichia coli MS 45-1]
gi|301047406|ref|ZP_07194486.1| divergent polysaccharide deacetylase [Escherichia coli MS 185-1]
gi|26110691|gb|AAN82876.1|AE016768_294 Hypothetical protein yibQ precursor [Escherichia coli CFT073]
gi|91074706|gb|ABE09587.1| hypothetical protein YibQ precursor [Escherichia coli UTI89]
gi|218367458|emb|CAR05240.1| putative polysaccharide deacetylase [Escherichia coli S88]
gi|226902651|gb|EEH88910.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227839062|gb|EEJ49528.1| divergent polysaccharide deacetylase [Escherichia coli 83972]
gi|294494032|gb|ADE92788.1| polysaccharide deacetylase family protein [Escherichia coli
IHE3034]
gi|300300680|gb|EFJ57065.1| divergent polysaccharide deacetylase [Escherichia coli MS 185-1]
gi|300408263|gb|EFJ91801.1| divergent polysaccharide deacetylase [Escherichia coli MS 45-1]
gi|307555716|gb|ADN48491.1| hypothetical protein YibQ precursor [Escherichia coli ABU 83972]
gi|307628691|gb|ADN72995.1| putative polysaccharide deacetylase [Escherichia coli UM146]
gi|315285352|gb|EFU44797.1| divergent polysaccharide deacetylase [Escherichia coli MS 110-3]
gi|315292992|gb|EFU52344.1| divergent polysaccharide deacetylase [Escherichia coli MS 153-1]
gi|323949856|gb|EGB45740.1| divergent polysaccharide deacetylase [Escherichia coli H252]
gi|323954843|gb|EGB50623.1| divergent polysaccharide deacetylase [Escherichia coli H263]
Length = 319
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRMQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|320193877|gb|EFW68510.1| putative divergent polysaccharide deacetylase [Escherichia coli
WV_060327]
Length = 319
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRMQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|315930930|gb|EFV09909.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
305]
Length = 360
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|121613073|ref|YP_001000334.1| hypothetical protein CJJ81176_0661 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005280|ref|ZP_02271038.1| hypothetical protein Cjejjejuni_03335 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87250269|gb|EAQ73227.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 360
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|1074506|pir||C64158 hypothetical protein HI0755 - Haemophilus influenzae (strain Rd
KW20)
Length = 284
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 32 SKLAIVIDDVGY-HLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQ 90
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 91 PVSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMT 148
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 149 ALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARK 208
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + +I V+ L+
Sbjct: 209 HGSAIAIGHPRPNTIAVLQAGLR 231
>gi|86153389|ref|ZP_01071593.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843115|gb|EAQ60326.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 360
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|293413051|ref|ZP_06655719.1| yibQ protein [Escherichia coli B354]
gi|331675098|ref|ZP_08375855.1| YibQ protein product [Escherichia coli TA280]
gi|291468698|gb|EFF11191.1| yibQ protein [Escherichia coli B354]
gi|331068007|gb|EGI39405.1| YibQ protein product [Escherichia coli TA280]
Length = 319
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|218707251|ref|YP_002414770.1| putative polysaccharide deacetylase [Escherichia coli UMN026]
gi|293407240|ref|ZP_06651164.1| yibQ protein [Escherichia coli FVEC1412]
gi|298382986|ref|ZP_06992581.1| yibQ protein [Escherichia coli FVEC1302]
gi|300898550|ref|ZP_07116882.1| divergent polysaccharide deacetylase [Escherichia coli MS 198-1]
gi|218434348|emb|CAR15272.1| putative polysaccharide deacetylase [Escherichia coli UMN026]
gi|284923650|emb|CBG36747.1| putative polysaccharide deacetylase [Escherichia coli 042]
gi|291426051|gb|EFE99085.1| yibQ protein [Escherichia coli FVEC1412]
gi|298276822|gb|EFI18340.1| yibQ protein [Escherichia coli FVEC1302]
gi|300357770|gb|EFJ73640.1| divergent polysaccharide deacetylase [Escherichia coli MS 198-1]
Length = 319
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|331685279|ref|ZP_08385865.1| YibQ protein product [Escherichia coli H299]
gi|331077650|gb|EGI48862.1| YibQ protein product [Escherichia coli H299]
Length = 319
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|57236946|ref|YP_178747.1| hypothetical protein CJE0736 [Campylobacter jejuni RM1221]
gi|205355483|ref|ZP_03222254.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|57165750|gb|AAW34529.1| conserved domain protein [Campylobacter jejuni RM1221]
gi|205346717|gb|EDZ33349.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|315058047|gb|ADT72376.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
S3]
gi|315926751|gb|EFV06125.1| divergent polysaccharide deacetylase family protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
Length = 360
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +LN+PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++ + G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLTQKKGFVIAIGHPRKNTFKALEQ--SKDLLKSVDLVYLS 355
>gi|292486586|ref|YP_003529454.1| hypothetical protein EAMY_0096 [Erwinia amylovora CFBP1430]
gi|292897823|ref|YP_003537192.1| exported polysaccharide deacetylase [Erwinia amylovora ATCC 49946]
gi|291197671|emb|CBJ44766.1| putative exported polysaccharide deacetylase [Erwinia amylovora
ATCC 49946]
gi|291552001|emb|CBA19038.1| Uncharacterized protein yibQ precursor [Erwinia amylovora CFBP1430]
Length = 308
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G Q+ + + PA I++A + +A + G E ++ +PM
Sbjct: 24 KLSIVIDDFGYRPAQEQQVLQM-PAAISVAVLPHAPHAREMATKAHQSGHEVLIHLPMAP 82
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + +++ +R + G+ N+ G+ + S+ + + +
Sbjct: 83 LSKQPLEKD--TLRPDMSTEEIGRIIREAAAAVPYAVGLNNHMGSAMTSSLPGMQKVMRV 140
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
F D + + A ++ + ++LDD + IR + +A+
Sbjct: 141 LNHYQFYFLDSMTIGNSQATRAAAGTSVKVVKRRVFLDDSQNEADIRVQFTRAVRLAQRD 200
Query: 352 GQAIGVAVAFDESIEVISQWL 372
G AI + ++ V+ Q L
Sbjct: 201 GSAIAIGHPHPSTVRVLQQML 221
>gi|260857988|ref|YP_003231879.1| putative polysaccharide deacetylase [Escherichia coli O26:H11 str.
11368]
gi|257756637|dbj|BAI28139.1| predicted polysaccharide deacetylase [Escherichia coli O26:H11 str.
11368]
gi|323155268|gb|EFZ41451.1| divergent polysaccharide deacetylase family protein [Escherichia
coli EPECa14]
Length = 319
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 RALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|324111944|gb|EGC05924.1| divergent polysaccharide deacetylase [Escherichia fergusonii B253]
Length = 318
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|281180660|dbj|BAI56990.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 319
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/201 (17%), Positives = 81/201 (40%), Gaps = 3/201 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQ 370
G I + ++ V+ Q
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQ 220
>gi|148926620|ref|ZP_01810301.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845139|gb|EDK22234.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 366
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +LN+PY+ D++LD
Sbjct: 247 INNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLD 306
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++ + G I + + + + Q ++ ++ V +V LS
Sbjct: 307 NEDDVNYVKKQLESAVKLTQKKGFVIAIGHPRKNTFKALEQ--SKDLLKSVDLVYLS 361
>gi|86151591|ref|ZP_01069805.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124148|ref|YP_004066152.1| hypothetical protein ICDCCJ07001_579 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841220|gb|EAQ58468.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017870|gb|ADT65963.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 360
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSIPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|320535663|ref|ZP_08035755.1| divergent polysaccharide deacetylase [Treponema phagedenis F0421]
gi|320147491|gb|EFW39015.1| divergent polysaccharide deacetylase [Treponema phagedenis F0421]
Length = 455
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
G+E IL PMQA + + N +K T Q+ L ++ G+ N+ G+++
Sbjct: 280 GKECILHQPMQAINPNVNPGQG-AIKPGMTAAQIREILNKNIEELWPIAGMNNHEGSLIT 338
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+++ + + + A++ + F D ++ + +A + N+ +++D+ +R +
Sbjct: 339 ADENAMQAVLDTVAEKHIYFLDSRTNVHTVVPRIAKERNMVIWERSVFIDNDKNRKAMEN 398
Query: 340 KLKGLEEIARTTGQAIGVAVAF 361
++K +IA G +I + F
Sbjct: 399 EIKKGLKIAEQRGCSIMIGHVF 420
>gi|165976247|ref|YP_001651840.1| hypothetical protein APJL_0838 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876348|gb|ABY69396.1| hypothetical protein APJL_0838 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 226
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMN 272
++A ++ ++ ++ +PMQ + + +S L V + + + RL + R Y G+ N
Sbjct: 15 QKAYEQKRDVLIHLPMQPKNR-HQPIESGALMVGASKENVA-RLIQAARNQVPYAIGLNN 72
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ +++++ E + E +K+ L F D + P +V A +L + + +L+LDD
Sbjct: 73 HMGSGATADRQTMEHLMTELSKQQLFFLDSKTGPSVAAKV-ARELGVNALERNLFLDDND 131
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+++ + AR G AI + SIEV+ + L
Sbjct: 132 ALHEVQNQFHLALHYARKHGSAILIGHPRKNSIEVLEKGL 171
>gi|218550892|ref|YP_002384683.1| polysaccharide deacetylase [Escherichia fergusonii ATCC 35469]
gi|218358433|emb|CAQ91080.1| putative polysaccharide deacetylase [Escherichia fergusonii ATCC
35469]
gi|325499163|gb|EGC97022.1| polysaccharide deacetylase [Escherichia fergusonii ECD227]
Length = 318
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|170683133|ref|YP_001745916.1| polysaccharide deacetylase family protein [Escherichia coli
SMS-3-5]
gi|170520851|gb|ACB19029.1| polysaccharide deacetylase family protein [Escherichia coli
SMS-3-5]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|332997808|gb|EGK17419.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-272]
gi|333013340|gb|EGK32712.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-227]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 HNGSTIAIGHPHPSTVRVLQQMV 222
>gi|110643858|ref|YP_671588.1| hypothetical protein ECP_3715 [Escherichia coli 536]
gi|191170375|ref|ZP_03031928.1| polysaccharide deacetylase family protein [Escherichia coli F11]
gi|215488894|ref|YP_002331325.1| predicted polysaccharide deacetylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218691901|ref|YP_002400113.1| putative polysaccharide deacetylase [Escherichia coli ED1a]
gi|218702383|ref|YP_002410012.1| putative polysaccharide deacetylase [Escherichia coli IAI39]
gi|301018946|ref|ZP_07183169.1| divergent polysaccharide deacetylase [Escherichia coli MS 69-1]
gi|306816035|ref|ZP_07450173.1| putative polysaccharide deacetylase [Escherichia coli NC101]
gi|312968044|ref|ZP_07782255.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 2362-75]
gi|331649432|ref|ZP_08350518.1| YibQ protein product [Escherichia coli M605]
gi|331665242|ref|ZP_08366143.1| YibQ protein product [Escherichia coli TA143]
gi|110345450|gb|ABG71687.1| hypothetical protein YibQ precursor [Escherichia coli 536]
gi|190909183|gb|EDV68769.1| polysaccharide deacetylase family protein [Escherichia coli F11]
gi|215266966|emb|CAS11411.1| predicted polysaccharide deacetylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218372369|emb|CAR20243.1| putative polysaccharide deacetylase [Escherichia coli IAI39]
gi|218429465|emb|CAR10430.2| putative polysaccharide deacetylase [Escherichia coli ED1a]
gi|222035325|emb|CAP78070.1| Uncharacterized protein yibQ [Escherichia coli LF82]
gi|300399440|gb|EFJ82978.1| divergent polysaccharide deacetylase [Escherichia coli MS 69-1]
gi|305850431|gb|EFM50888.1| putative polysaccharide deacetylase [Escherichia coli NC101]
gi|312287303|gb|EFR15212.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 2362-75]
gi|312948178|gb|ADR29005.1| putative polysaccharide deacetylase [Escherichia coli O83:H1 str.
NRG 857C]
gi|315297051|gb|EFU56331.1| divergent polysaccharide deacetylase [Escherichia coli MS 16-3]
gi|323189343|gb|EFZ74625.1| divergent polysaccharide deacetylase family protein [Escherichia
coli RN587/1]
gi|324008122|gb|EGB77341.1| divergent polysaccharide deacetylase [Escherichia coli MS 57-2]
gi|324012623|gb|EGB81842.1| divergent polysaccharide deacetylase [Escherichia coli MS 60-1]
gi|330909679|gb|EGH38193.1| putative divergent polysaccharide deacetylase [Escherichia coli
AA86]
gi|331041930|gb|EGI14074.1| YibQ protein product [Escherichia coli M605]
gi|331057752|gb|EGI29738.1| YibQ protein product [Escherichia coli TA143]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|188493391|ref|ZP_03000661.1| divergent polysaccharide deacetylase [Escherichia coli 53638]
gi|218697338|ref|YP_002405005.1| putative polysaccharide deacetylase [Escherichia coli 55989]
gi|293417079|ref|ZP_06659706.1| hypothetical protein ECDG_04229 [Escherichia coli B185]
gi|293463941|ref|ZP_06664355.1| hypothetical protein ECCG_04022 [Escherichia coli B088]
gi|309784406|ref|ZP_07679045.1| divergent polysaccharide deacetylase family protein [Shigella
dysenteriae 1617]
gi|188488590|gb|EDU63693.1| divergent polysaccharide deacetylase [Escherichia coli 53638]
gi|218354070|emb|CAV00606.1| putative polysaccharide deacetylase [Escherichia coli 55989]
gi|291321573|gb|EFE61009.1| hypothetical protein ECCG_04022 [Escherichia coli B088]
gi|291431110|gb|EFF04103.1| hypothetical protein ECDG_04229 [Escherichia coli B185]
gi|308927913|gb|EFP73381.1| divergent polysaccharide deacetylase family protein [Shigella
dysenteriae 1617]
gi|320201358|gb|EFW75939.1| putative divergent polysaccharide deacetylase [Escherichia coli
EC4100B]
gi|323934840|gb|EGB31222.1| divergent polysaccharide deacetylase [Escherichia coli E1520]
gi|324116044|gb|EGC09970.1| divergent polysaccharide deacetylase [Escherichia coli E1167]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|256021379|ref|ZP_05435244.1| putative polysaccharide deacetylase [Shigella sp. D9]
gi|332282613|ref|ZP_08395026.1| polysaccharide deacetylase [Shigella sp. D9]
gi|332104965|gb|EGJ08311.1| polysaccharide deacetylase [Shigella sp. D9]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|300939215|ref|ZP_07153896.1| divergent polysaccharide deacetylase [Escherichia coli MS 21-1]
gi|300455896|gb|EFK19389.1| divergent polysaccharide deacetylase [Escherichia coli MS 21-1]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|323173207|gb|EFZ58836.1| divergent polysaccharide deacetylase family protein [Escherichia
coli LT-68]
Length = 319
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVLEM-PSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|291086413|ref|ZP_06571498.1| YibQ protein [Citrobacter youngae ATCC 29220]
gi|291068178|gb|EFE06287.1| YibQ protein [Citrobacter youngae ATCC 29220]
Length = 247
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+A G E ++ +PM + E D TL+ + +++ +R ++ + G+ N+
Sbjct: 4 KAHNSGHEVLIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIRDAVSKVPNAVGLNNHM 61
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + S+ + + + + L F D + + A + + ++LDD +
Sbjct: 62 GSAMTSSLFGMQKVMQALERYDLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNE 121
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
IR + E+AR G AI + ++ V+ Q L
Sbjct: 122 ADIRRQFNRAVELARRNGSAIAIGHPHPSTVRVLQQML 159
>gi|149376054|ref|ZP_01893820.1| hypothetical protein MDG893_03710 [Marinobacter algicola DG893]
gi|149359691|gb|EDM48149.1| hypothetical protein MDG893_03710 [Marinobacter algicola DG893]
Length = 269
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAI++ +G + +R I L ITLAF R + A +K +E +L PM
Sbjct: 30 IAIIIDDMGHNLVEGERLIAL-EQPITLAFLPYRRYTTRLAELAHRKHKEIMLHAPMANT 88
Query: 233 DE------SYNED-DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
N D D ++ T LR +L+ GV N+ G++L +
Sbjct: 89 RNIGLGPGGLNPDMDQNSIATT---------LRRALQSIPHVQGVNNHMGSLLTQQLQPM 139
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + E + F D + ++ +A +P + D++LD + + + ++ + L
Sbjct: 140 DWVMSELDHYPVYFVDSRTIASSIAGEVAAAYRIPTLTRDVFLDHEQTEEFVDQQFELLI 199
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ A+ G AIG+ +++ + + L + + +++ +S +
Sbjct: 200 KRAKENGSAIGIGHPHKVTVDYLEKRLPELDEQGIAIATVSGV 242
>gi|269140804|ref|YP_003297505.1| hypothetical protein ETAE_3463 [Edwardsiella tarda EIB202]
gi|267986465|gb|ACY86294.1| hypothetical protein ETAE_3463 [Edwardsiella tarda EIB202]
gi|304560564|gb|ADM43228.1| Putative periplasmic protein [Edwardsiella tarda FL6-60]
Length = 309
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 3/204 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P +T+A N A +G+E ++ +PM + E D TL+ T + ++
Sbjct: 46 MPLPVTIAVLPNAPHAREMALRAHAQGREILIHLPMAPISKQPLERD--TLQPTMSEAEI 103
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF-DDGSSPRNLTRV 312
+R ++ G+ N+ G+ + S+ + + + + L+F D + +
Sbjct: 104 QRIIRQAVGNVPYAVGMNNHMGSAMTSSLSGMQKVMRALEQYHFLYFLDSMTIGHSQVSN 163
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
A + + ++LDD + IR + +AR G AI + ++ V+ Q L
Sbjct: 164 AALGTGIKVIKRKVFLDDAQNESAIRTQFNRAITLARRNGSAIAIGHPHPATVRVLQQML 223
Query: 373 QQEHVRDVSVVPLSCLAKLSSPSS 396
+ V V P + L + + P S
Sbjct: 224 RTLPPDIVLVRPSALLNEATRPDS 247
>gi|146284395|ref|YP_001174548.1| hypothetical protein PST_4083 [Pseudomonas stutzeri A1501]
gi|145572600|gb|ABP81706.1| putative exported protein [Pseudomonas stutzeri A1501]
Length = 263
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/216 (17%), Positives = 82/216 (37%), Gaps = 22/216 (10%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
D+ + S + +++ LG + +R + L P + LA ++A + G
Sbjct: 27 DRRVAARPS---LTLIIDDLGQNPARDRRVLQL-PGPVALAILPGTRHAAELAEQAHRAG 82
Query: 221 QEAILQIPMQ------AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+ +L +PM A+ D+ R G+ N+
Sbjct: 83 KTVMLHMPMAPAGGRFAWHPQLPHDELARRLDAALAAVPHVR------------GLNNHM 130
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + ++ + E +R L F D +SPR + A + L + D++LDD
Sbjct: 131 GSAMTEQPQAMTWLMGELQRRHLFFLDSRTSPRTVAAASAQRTALASLSRDIFLDDDPSP 190
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
+ E+ + +AR G + + + ++ ++ +
Sbjct: 191 AAVAERFQAAIALARKQGSVVIIGHPHESTLALLER 226
>gi|331659937|ref|ZP_08360875.1| YibQ protein product [Escherichia coli TA206]
gi|331053152|gb|EGI25185.1| YibQ protein product [Escherichia coli TA206]
Length = 319
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|332996160|gb|EGK15787.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri VA-6]
Length = 319
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|323965881|gb|EGB61329.1| divergent polysaccharide deacetylase [Escherichia coli M863]
gi|327250739|gb|EGE62441.1| divergent polysaccharide deacetylase family protein [Escherichia
coli STEC_7v]
Length = 319
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|305433166|ref|ZP_07402322.1| conserved hypothetical protein [Campylobacter coli JV20]
gi|304443867|gb|EFM36524.1| conserved hypothetical protein [Campylobacter coli JV20]
Length = 343
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 116/246 (47%), Gaps = 16/246 (6%)
Query: 144 LLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLG-ISQTGTQRAINL--LPANITL 200
L+ + + +E+ M+ S AR+AI++ + ISQ +A+ L +P+
Sbjct: 106 LVVEQNLSKEENLTKDMN---LSKTKQARLAIIIDDMANISQVRALQALKLKLIPS---- 158
Query: 201 AFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYS 260
F + N +D + K ++ +P+ A + + E D TL + + +++ +++
Sbjct: 159 FFPPDKNHID--TPKLALKFDFYMVHLPLAAMNYTKPELD--TLNPSDSEKRIFKKIQQV 214
Query: 261 LRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP 320
+ + N+ G++ S++++ + ++K F K L+F D + + +A L
Sbjct: 215 KKDFKDLKFINNHTGSLFTSDEKAMKKLYKAFEKEELIFVDSKTIASSKAPKVAKALGQI 274
Query: 321 YMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDV 380
Y+ D++LD++ D I+ +L +A+ G AI + + + + Q ++ ++ V
Sbjct: 275 YIQRDVFLDNRDDVAYIKNQLIEAVRLAKQKGFAIAIGHPRKNTFKALEQ--SKDLLKSV 332
Query: 381 SVVPLS 386
+V LS
Sbjct: 333 ELVYLS 338
>gi|260870347|ref|YP_003236749.1| putative polysaccharide deacetylase [Escherichia coli O111:H- str.
11128]
gi|257766703|dbj|BAI38198.1| predicted polysaccharide deacetylase [Escherichia coli O111:H- str.
11128]
Length = 319
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|86149913|ref|ZP_01068142.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839731|gb|EAQ56991.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 360
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +L++PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
++ D + ++++L+ ++A+ G I + + + + Q ++ ++ V +V LS
Sbjct: 301 NEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLS 355
>gi|168766036|ref|ZP_02791043.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4486]
gi|189364563|gb|EDU82982.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4486]
Length = 319
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|38704183|ref|NP_312519.2| hypothetical protein ECs4492 [Escherichia coli O157:H7 str. Sakai]
gi|157157521|ref|YP_001465097.1| polysaccharide deacetylase family protein [Escherichia coli
E24377A]
gi|157163098|ref|YP_001460416.1| polysaccharide deacetylase family protein [Escherichia coli HS]
gi|168746834|ref|ZP_02771856.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4113]
gi|168753440|ref|ZP_02778447.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4401]
gi|168759714|ref|ZP_02784721.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4501]
gi|168772418|ref|ZP_02797425.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4196]
gi|168779772|ref|ZP_02804779.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4076]
gi|168785494|ref|ZP_02810501.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC869]
gi|168797460|ref|ZP_02822467.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC508]
gi|170018153|ref|YP_001723107.1| protein of unknown function DUF610 YibQ [Escherichia coli ATCC
8739]
gi|191168137|ref|ZP_03029934.1| polysaccharide deacetylase family protein [Escherichia coli B7A]
gi|193068550|ref|ZP_03049512.1| polysaccharide deacetylase family protein [Escherichia coli
E110019]
gi|208807566|ref|ZP_03249903.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4206]
gi|208814455|ref|ZP_03255784.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4045]
gi|208820448|ref|ZP_03260768.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4042]
gi|209399753|ref|YP_002273096.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4115]
gi|209921088|ref|YP_002295172.1| hypothetical protein ECSE_3897 [Escherichia coli SE11]
gi|217325442|ref|ZP_03441526.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. TW14588]
gi|253771543|ref|YP_003034374.1| hypothetical protein ECBD_0111 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163544|ref|YP_003046652.1| putative polysaccharide deacetylase [Escherichia coli B str.
REL606]
gi|254795572|ref|YP_003080409.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
TW14359]
gi|261224201|ref|ZP_05938482.1| predicted polysaccharide deacetylase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254812|ref|ZP_05947345.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284988|ref|YP_003501806.1| hypothetical protein G2583_4353 [Escherichia coli O55:H7 str.
CB9615]
gi|300815145|ref|ZP_07095370.1| divergent polysaccharide deacetylase [Escherichia coli MS 107-1]
gi|300822387|ref|ZP_07102527.1| divergent polysaccharide deacetylase [Escherichia coli MS 119-7]
gi|300907658|ref|ZP_07125286.1| divergent polysaccharide deacetylase [Escherichia coli MS 84-1]
gi|300919816|ref|ZP_07136291.1| divergent polysaccharide deacetylase [Escherichia coli MS 115-1]
gi|300923401|ref|ZP_07139442.1| divergent polysaccharide deacetylase [Escherichia coli MS 182-1]
gi|300927953|ref|ZP_07143512.1| divergent polysaccharide deacetylase [Escherichia coli MS 187-1]
gi|300948053|ref|ZP_07162192.1| divergent polysaccharide deacetylase [Escherichia coli MS 116-1]
gi|300954492|ref|ZP_07166941.1| divergent polysaccharide deacetylase [Escherichia coli MS 175-1]
gi|301303850|ref|ZP_07209969.1| divergent polysaccharide deacetylase [Escherichia coli MS 124-1]
gi|301325299|ref|ZP_07218806.1| divergent polysaccharide deacetylase [Escherichia coli MS 78-1]
gi|301644280|ref|ZP_07244283.1| divergent polysaccharide deacetylase [Escherichia coli MS 146-1]
gi|307140313|ref|ZP_07499669.1| putative polysaccharide deacetylase [Escherichia coli H736]
gi|307314298|ref|ZP_07593906.1| protein of unknown function DUF610 YibQ [Escherichia coli W]
gi|309797485|ref|ZP_07691876.1| divergent polysaccharide deacetylase [Escherichia coli MS 145-7]
gi|312972100|ref|ZP_07786274.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1827-70]
gi|331644333|ref|ZP_08345462.1| YibQ protein product [Escherichia coli H736]
gi|331655247|ref|ZP_08356246.1| YibQ protein product [Escherichia coli M718]
gi|331670458|ref|ZP_08371297.1| YibQ protein product [Escherichia coli TA271]
gi|331679708|ref|ZP_08380378.1| YibQ protein product [Escherichia coli H591]
gi|157068778|gb|ABV08033.1| polysaccharide deacetylase family protein [Escherichia coli HS]
gi|157079551|gb|ABV19259.1| polysaccharide deacetylase family protein [Escherichia coli
E24377A]
gi|169753081|gb|ACA75780.1| protein of unknown function DUF610 YibQ [Escherichia coli ATCC
8739]
gi|187771729|gb|EDU35573.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4196]
gi|188018304|gb|EDU56426.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4113]
gi|189002373|gb|EDU71359.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4076]
gi|189358842|gb|EDU77261.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4401]
gi|189369563|gb|EDU87979.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4501]
gi|189374594|gb|EDU93010.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC869]
gi|189380099|gb|EDU98515.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC508]
gi|190901806|gb|EDV61558.1| polysaccharide deacetylase family protein [Escherichia coli B7A]
gi|192958201|gb|EDV88642.1| polysaccharide deacetylase family protein [Escherichia coli
E110019]
gi|208727367|gb|EDZ76968.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4206]
gi|208735732|gb|EDZ84419.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4045]
gi|208740571|gb|EDZ88253.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4042]
gi|209161153|gb|ACI38586.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4115]
gi|209914347|dbj|BAG79421.1| conserved hypothetical protein [Escherichia coli SE11]
gi|217321663|gb|EEC30087.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. TW14588]
gi|242379138|emb|CAQ33940.1| putative nucleoside (IDP) diphosphatase [Escherichia coli
BL21(DE3)]
gi|253322587|gb|ACT27189.1| protein of unknown function DUF610 YibQ [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975445|gb|ACT41116.1| predicted polysaccharide deacetylase [Escherichia coli B str.
REL606]
gi|253979601|gb|ACT45271.1| predicted polysaccharide deacetylase [Escherichia coli BL21(DE3)]
gi|254594972|gb|ACT74333.1| predicted polysaccharide deacetylase [Escherichia coli O157:H7 str.
TW14359]
gi|281602976|gb|ADA75960.1| Polysaccharide deacetylase family protein [Shigella flexneri
2002017]
gi|290764861|gb|ADD58822.1| Uncharacterized protein conserved in bacteria [Escherichia coli
O55:H7 str. CB9615]
gi|300318525|gb|EFJ68309.1| divergent polysaccharide deacetylase [Escherichia coli MS 175-1]
gi|300400594|gb|EFJ84132.1| divergent polysaccharide deacetylase [Escherichia coli MS 84-1]
gi|300413169|gb|EFJ96479.1| divergent polysaccharide deacetylase [Escherichia coli MS 115-1]
gi|300420311|gb|EFK03622.1| divergent polysaccharide deacetylase [Escherichia coli MS 182-1]
gi|300452394|gb|EFK16014.1| divergent polysaccharide deacetylase [Escherichia coli MS 116-1]
gi|300464045|gb|EFK27538.1| divergent polysaccharide deacetylase [Escherichia coli MS 187-1]
gi|300525034|gb|EFK46103.1| divergent polysaccharide deacetylase [Escherichia coli MS 119-7]
gi|300532037|gb|EFK53099.1| divergent polysaccharide deacetylase [Escherichia coli MS 107-1]
gi|300840813|gb|EFK68573.1| divergent polysaccharide deacetylase [Escherichia coli MS 124-1]
gi|300847826|gb|EFK75586.1| divergent polysaccharide deacetylase [Escherichia coli MS 78-1]
gi|301077380|gb|EFK92186.1| divergent polysaccharide deacetylase [Escherichia coli MS 146-1]
gi|306906121|gb|EFN36640.1| protein of unknown function DUF610 YibQ [Escherichia coli W]
gi|308118921|gb|EFO56183.1| divergent polysaccharide deacetylase [Escherichia coli MS 145-7]
gi|310334477|gb|EFQ00682.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1827-70]
gi|315062905|gb|ADT77232.1| predicted polysaccharide deacetylase [Escherichia coli W]
gi|315254003|gb|EFU33971.1| divergent polysaccharide deacetylase [Escherichia coli MS 85-1]
gi|320191332|gb|EFW65982.1| putative divergent polysaccharide deacetylase [Escherichia coli
O157:H7 str. EC1212]
gi|320639523|gb|EFX09131.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
G5101]
gi|320655581|gb|EFX23509.1| putative polysaccharide deacetylase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661315|gb|EFX28739.1| putative polysaccharide deacetylase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666329|gb|EFX33328.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
LSU-61]
gi|323376502|gb|ADX48770.1| protein of unknown function DUF610 YibQ [Escherichia coli KO11]
gi|323939624|gb|EGB35830.1| divergent polysaccharide deacetylase [Escherichia coli E482]
gi|323944070|gb|EGB40150.1| divergent polysaccharide deacetylase [Escherichia coli H120]
gi|323959865|gb|EGB55513.1| divergent polysaccharide deacetylase [Escherichia coli H489]
gi|323971259|gb|EGB66504.1| divergent polysaccharide deacetylase [Escherichia coli TA007]
gi|324019726|gb|EGB88945.1| divergent polysaccharide deacetylase [Escherichia coli MS 117-3]
gi|326337384|gb|EGD61219.1| putative divergent polysaccharide deacetylase [Escherichia coli
O157:H7 str. 1044]
gi|326339909|gb|EGD63716.1| putative divergent polysaccharide deacetylase [Escherichia coli
O157:H7 str. 1125]
gi|331036627|gb|EGI08853.1| YibQ protein product [Escherichia coli H736]
gi|331047262|gb|EGI19340.1| YibQ protein product [Escherichia coli M718]
gi|331062520|gb|EGI34440.1| YibQ protein product [Escherichia coli TA271]
gi|331072880|gb|EGI44205.1| YibQ protein product [Escherichia coli H591]
gi|332749934|gb|EGJ80346.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-671]
gi|332750094|gb|EGJ80505.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 4343-70]
gi|332751254|gb|EGJ81657.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 2747-71]
gi|332764186|gb|EGJ94423.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 2930-71]
gi|332997354|gb|EGK16970.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-218]
gi|333012897|gb|EGK32274.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-304]
Length = 319
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|320644962|gb|EFX13992.1| putative polysaccharide deacetylase [Escherichia coli O157:H- str.
493-89]
gi|320650229|gb|EFX18718.1| putative polysaccharide deacetylase [Escherichia coli O157:H- str.
H 2687]
Length = 319
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|57167659|ref|ZP_00366799.1| probable periplasmic protein Cj0633 [Campylobacter coli RM2228]
gi|57020781|gb|EAL57445.1| probable periplasmic protein Cj0633 [Campylobacter coli RM2228]
Length = 350
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 127/273 (46%), Gaps = 32/273 (11%)
Query: 122 STSID-SLPTIEERLIL----GLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
S+ ID +L I+E L L LSK+E L K D N S AR+AI+
Sbjct: 97 SSIIDGNLSKIDENLSLVVEQNLSKEENLTK-------------DMN-LSKTKQARLAII 142
Query: 177 VSGLG-ISQTGTQRAINL--LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
+ + ISQ +A+ L +P+ F + N +D + K ++ +P+ A +
Sbjct: 143 IDDMANISQVRALQALKLKLIPS----FFPPDKNHID--TPKLALKFDFYMVHLPLAAMN 196
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
+ E D TL + + +++ +++ + + N+ G++ S++++ + ++K F
Sbjct: 197 YTKPELD--TLNPSDSEKRIFKKIQQVKKDFKDLKFINNHTGSLFTSDEKAMKKLYKAFE 254
Query: 294 KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQ 353
K L+F D + + +A L Y+ D++LD++ D I+ +L +A+ G
Sbjct: 255 KEELIFVDSKTIASSKAPKVAKALGQIYIQRDVFLDNRDDVAYIKNQLIEAVRLAKQKGF 314
Query: 354 AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
AI + + + + Q ++ ++ V +V LS
Sbjct: 315 AIAIGHPRKNTFKALEQ--SKDLLKSVELVYLS 345
>gi|89110397|ref|AP_004177.1| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. W3110]
gi|90111621|ref|NP_418071.4| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. MG1655]
gi|170083122|ref|YP_001732442.1| polysaccharide deacetylase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902705|ref|YP_002928501.1| putative polysaccharide deacetylase [Escherichia coli BW2952]
gi|254038815|ref|ZP_04872867.1| polysaccharide deacetylase [Escherichia sp. 1_1_43]
gi|18545478|sp|P37691|YIBQ_ECOLI RecName: Full=Uncharacterized protein yibQ; Flags: Precursor
gi|85676428|dbj|BAE77678.1| predicted polysaccharide deacetylase [Escherichia coli str. K12
substr. W3110]
gi|87082298|gb|AAC76638.2| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. MG1655]
gi|169890957|gb|ACB04664.1| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. DH10B]
gi|226838780|gb|EEH70807.1| polysaccharide deacetylase [Escherichia sp. 1_1_43]
gi|238862835|gb|ACR64833.1| predicted polysaccharide deacetylase [Escherichia coli BW2952]
gi|260447367|gb|ACX37789.1| protein of unknown function DUF610 YibQ [Escherichia coli DH1]
gi|309704018|emb|CBJ03364.1| putative polysaccharide deacetylase [Escherichia coli ETEC H10407]
gi|315138196|dbj|BAJ45355.1| putative polysaccharide deacetylase [Escherichia coli DH1]
Length = 319
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPATVRVLQQMV 222
>gi|194427407|ref|ZP_03059956.1| polysaccharide deacetylase family protein [Escherichia coli B171]
gi|194414447|gb|EDX30720.1| polysaccharide deacetylase family protein [Escherichia coli B171]
gi|323160707|gb|EFZ46644.1| divergent polysaccharide deacetylase family protein [Escherichia
coli E128010]
Length = 319
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|332345585|gb|AEE58919.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 319
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPATVRVLQQMV 222
>gi|327398190|ref|YP_004339059.1| hypothetical protein Hipma_0017 [Hippea maritima DSM 10411]
gi|327180819|gb|AEA33000.1| protein of unknown function DUF610 YibQ [Hippea maritima DSM 10411]
Length = 247
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+AIV+ +G R L + AF + K+ K G ++ +P Q
Sbjct: 33 RLAIVIDDMGYDVALANR-FESLKMPLAFAFLPDAPFSGELSKKLSKDGFIVMIHMPSQP 91
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
D + + + + + + L ++ ++ G+ N+ G+ +L +K + I +
Sbjct: 92 IDYPKDNPGKHAIYLWTSKAETFRLLNWAYKKIPNAMGLNNHMGSAILRDKTHLDYIMEF 151
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
K L F D + +L + A K + ++LD++ + I+ +++ ++ +
Sbjct: 152 LKKHDLFFIDSATVKDSLGCIEAEKFGVMCAKRRVFLDNKKNVAYIKGQIRQALKMLKKR 211
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
+ + +++ E ++Q +Q VSVV
Sbjct: 212 NNVVAIGHCNEKTYEALAQMKKQLKPYLVSVV 243
>gi|193066089|ref|ZP_03047145.1| polysaccharide deacetylase family protein [Escherichia coli E22]
gi|260846618|ref|YP_003224396.1| putative polysaccharide deacetylase [Escherichia coli O103:H2 str.
12009]
gi|192926251|gb|EDV80889.1| polysaccharide deacetylase family protein [Escherichia coli E22]
gi|257761765|dbj|BAI33262.1| predicted polysaccharide deacetylase [Escherichia coli O103:H2 str.
12009]
gi|323182645|gb|EFZ68048.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1357]
Length = 319
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|256025655|ref|ZP_05439520.1| predicted polysaccharide deacetylase [Escherichia sp. 4_1_40B]
Length = 319
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|218556179|ref|YP_002389092.1| putative polysaccharide deacetylase [Escherichia coli IAI1]
gi|218362947|emb|CAR00584.1| putative polysaccharide deacetylase [Escherichia coli IAI1]
Length = 319
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRRAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGYTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|46580740|ref|YP_011548.1| hypothetical protein DVU2335 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450160|gb|AAS96808.1| conserved domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234454|gb|ADP87308.1| protein of unknown function DUF610 YibQ [Desulfovibrio vulgaris
RCH1]
Length = 516
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 4/213 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
GA +AIV+ +G S G R + L +T A + + A + G+E ++ PM
Sbjct: 291 GALLAIVIDDIGESM-GAVRDLLKLDYPVTFAVWPRSSHAREAAEAAHRAGREVMIHQPM 349
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + + V ++ LR +L R G+ N+ G+ + +
Sbjct: 350 EPLKYPSVKPGPGAIYVRMGSDEIEATLRDNLARVPHAVGLNNHMGSRFTQDTRGVRAVC 409
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+GL D + ++ A K LP +++LD D+ I +L +A
Sbjct: 410 DALEGKGLFVLDSVTHSGSVFYREARKAGLPAGKRNVFLDVIHDKRNIMFQLDKAARVAH 469
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
G A+ + E++ + +W + RD SV
Sbjct: 470 EQGVAVAIGHPLAETVAALKEW---QRTRDKSV 499
>gi|301028373|ref|ZP_07191620.1| divergent polysaccharide deacetylase [Escherichia coli MS 196-1]
gi|299878575|gb|EFI86786.1| divergent polysaccharide deacetylase [Escherichia coli MS 196-1]
Length = 319
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKGIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMV 222
>gi|56963524|ref|YP_175255.1| hypothetical protein ABC1759 [Bacillus clausii KSM-K16]
gi|56909767|dbj|BAD64294.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 266
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 164 FCSN----ASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKK 218
FC N A+ +AI++ G + G + +P +T+A N A +
Sbjct: 19 FCPNTICDAANKDVAIIIDDFGGNVKGVDAFLQGDIP--VTVAIMPNMPYTTEQAIAAHE 76
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G E I+ +P++ + + + V + +++ RLR + + G+ N+ G+
Sbjct: 77 NGLEVIIHLPLEPKNGKASWLGPNGITVDLSNEEINKRLREAYEQIPYAVGLNNHMGSKA 136
Query: 279 LSNKESAEVIFKEFAK-RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
+ +K +I EFAK GL D ++P ++ LA K +P L+LDD
Sbjct: 137 MEDKRIVGLIV-EFAKTNGLYLVDSKTTPHSVMPELALKAQIPCFENKLFLDD 188
>gi|261866855|ref|YP_003254777.1| divergent polysaccharide deacetylase superfamily protein
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|293391508|ref|ZP_06635842.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261412187|gb|ACX81558.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290952042|gb|EFE02161.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 275
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ LG + I LP +++A + ++A ++G++ ++ +
Sbjct: 21 AYSAKLAIVIDDLGYHPKEDAQ-ILALPKAVSVAIIPAAPYAKQRNQQAHQQGRDILIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + E L + Q +++ +R++ + + + G+ N+ G+ ++
Sbjct: 80 PMETVSKMKIEGGGLHLGMNQ--EEVNHRVQTAKKIVSHAIGMNNHMGSAATADVPLMTK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +R L F D + R++ +A + + ++LDD D ++ + + +
Sbjct: 138 LMTALRERHLFFLDSRTIGRSVAGKIAKAQGVLALDRHIFLDDSNDLADVQRQFRAAVQY 197
Query: 348 ARTTGQAIGVAVAFDESIEVI 368
A+ G AI + +I V+
Sbjct: 198 AQKHGTAIAIGHPRKNTIAVL 218
>gi|89100427|ref|ZP_01173290.1| hypothetical protein B14911_20563 [Bacillus sp. NRRL B-14911]
gi|89084856|gb|EAR63994.1| hypothetical protein B14911_20563 [Bacillus sp. NRRL B-14911]
Length = 259
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 65/143 (45%)
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + G E ++ +PM+ + + + +++ R+ ++ G+ N+ G
Sbjct: 71 AHENGFEVMVHLPMEPKRGKKSWLGPKPITTNLSSEEVRKRVNEAIDSVPYAKGLNNHMG 130
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ + ++ I K +R L D G+SP + ++A +L +P + D++LDD
Sbjct: 131 SRAVEDEGIVREIVKIAKERKLYIVDSGTSPESKFPIIAKELGVPLIKRDVFLDDISSVS 190
Query: 336 KIREKLKGLEEIARTTGQAIGVA 358
+R ++K L I G+ I +
Sbjct: 191 HVRRQMKKLALITEQQGRGIAIG 213
>gi|327395759|dbj|BAK13181.1| periplasmic protein YibQ [Pantoea ananatis AJ13355]
Length = 258
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/184 (17%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT---- 249
+P I++A + + +A + G+E ++ +PM + E ++ T ++++
Sbjct: 1 MPQAISVAVLPDAPYARQMAIKAHQGGREVLIHLPMAPLSKQPLEKNTLTPEMSRAEIDR 60
Query: 250 -VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
++ +N + Y++ G+ N+ G+ + S+ + + + + L F D + +
Sbjct: 61 IIRSAVNNVPYAV-------GLNNHMGSKMTSSLPGMQKVMQALNQYNLYFLDSMTIGNS 113
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ A ++ + ++LDD D + IR++ +A+ G AI + ++ V+
Sbjct: 114 QSLQAAQGTHVRVLKRRVFLDDSQDINAIRQQFNRAVTLAQRDGYAIAIGHPHPNTVRVL 173
Query: 369 SQWL 372
Q L
Sbjct: 174 QQML 177
>gi|194435962|ref|ZP_03068065.1| polysaccharide deacetylase family protein [Escherichia coli 101-1]
gi|194425505|gb|EDX41489.1| polysaccharide deacetylase family protein [Escherichia coli 101-1]
Length = 319
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/208 (16%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVT-----QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ E ++ +++ + ++ +N + Y++ G+ N+ G+ + SN
Sbjct: 82 APLSKQPLEKNTLCPEMSSDEIERIIRSAVNNVPYAV-------GINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWL 372
++AR G I + ++ V+ Q +
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMV 222
>gi|187731969|ref|YP_001882314.1| polysaccharide deacetylase family protein [Shigella boydii CDC
3083-94]
gi|187428961|gb|ACD08235.1| polysaccharide deacetylase family protein [Shigella boydii CDC
3083-94]
Length = 319
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPLTVRVLQQMV 222
>gi|78044631|ref|YP_360224.1| putative N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996746|gb|ABB15645.1| putative N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 448
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 209 LDRWMKEAK---KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGT 265
L+ +EAK + G + I+ +PM+ + + V T Q++ + L +L+
Sbjct: 256 LNNTHQEAKALYQSGNDIIIHLPMEPKSYKRSWLGPRPIMVNLTPQEITSLLIAALKENP 315
Query: 266 GYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVAD 325
G+ N+ G+ +++ + + K L F D ++P +L +L + + + D
Sbjct: 316 WAIGINNHTGSRACEDEKIVKTVLSFCQKNNLAFIDSQTTPNSLFPLLGSEFGVVVLKRD 375
Query: 326 LYLDDQVDRDK-IREKLKGLEEIA--RTTGQAIG 356
++L+ +K I E+LK L+ IA + G AIG
Sbjct: 376 IFLEVNGKEEKNIIEQLKKLQSIAQKKNLGIAIG 409
>gi|320176324|gb|EFW51384.1| putative divergent polysaccharide deacetylase [Shigella dysenteriae
CDC 74-1112]
gi|320186843|gb|EFW61563.1| putative divergent polysaccharide deacetylase [Shigella flexneri
CDC 796-83]
gi|332089546|gb|EGI94650.1| divergent polysaccharide deacetylase family protein [Shigella
boydii 3594-74]
Length = 319
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVL-AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
G I + ++ V+ Q +
Sbjct: 200 RNGSTIAIGHPHPLTVRVLQQMV 222
>gi|167463615|ref|ZP_02328704.1| hypothetical protein Plarl_13849 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381594|ref|ZP_08055567.1| hypothetical protein PL1_0781 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154430|gb|EFX46733.1| hypothetical protein PL1_0781 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 281
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R AIV+ G GT+ + L P IT+A + + A G+E I+ +PM+
Sbjct: 57 RAAIVIDDFGNKMGGTEDMLAL-PFPITVAVMPFLQTTKADAEAAHAAGKEVIIHLPMEP 115
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + ++ R+ ++ G+ N+ G+ ++ +++ +
Sbjct: 116 KIARKSWLGPGVISTDLKNDEIRKRVHAAIDEVPHAIGINNHMGSKATGDERVMKLVLEV 175
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+RGL F D ++ ++ A ++ +P + L+LDD + I ++++ L++
Sbjct: 176 CKERGLFFLDSHTNYWSIACRKAKEVGVPCIENHLFLDDIHTKKHISQQVRLLDK 230
>gi|126665725|ref|ZP_01736706.1| hypothetical protein MELB17_04132 [Marinobacter sp. ELB17]
gi|126629659|gb|EBA00276.1| hypothetical protein MELB17_04132 [Marinobacter sp. ELB17]
Length = 281
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 3/218 (1%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
T + M N IAI++ +G + +R + L ITL+F K
Sbjct: 15 TMLVGMVSNIALAGPPPTIAIIIDDMGHDRLEGER-LARLEQPITLSFLPYRRHTVELAK 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+ +E +L PM T + Q QL LR +L+ GV N+
Sbjct: 74 LSHSLNKEIMLHAPMANTQHFGLGPGGLTEDMDQA--QLTRTLRRALQSVPHVQGVNNHM 131
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G++L + + + E + L F D + ++ +A +P D++LD +
Sbjct: 132 GSLLTQRLQPMDWVMTELGQYPLYFVDSRTIASSIAGDVARAHRIPSFTRDVFLDHEQTE 191
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+ + + K L + AR G AI + +++ + + L
Sbjct: 192 EFVDRQFKLLIQRARQQGTAIAIGHPHKITVDYLEKHL 229
>gi|303239963|ref|ZP_07326485.1| protein of unknown function DUF610 YibQ [Acetivibrio cellulolyticus
CD2]
gi|302592442|gb|EFL62168.1| protein of unknown function DUF610 YibQ [Acetivibrio cellulolyticus
CD2]
Length = 282
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S+ +IAIV+ G + G + +++ ++T A K+A +KG E I+
Sbjct: 55 SDKPAGKIAIVIDDFGQDRNGVKEMMSI-NRHLTFAVMPFLTYSQSDAKDAFEKGFEVIV 113
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+ + + T + ++ +L G + G+ + +N
Sbjct: 114 HLPMEPVSGKISWLGPKPILSTLSDTEVYEITSEALTNVPYAVGANIHMGSKISTNDRIM 173
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + G+ F D +S +++ + +A + + + +++LD Q ++ ++E+L+
Sbjct: 174 SDVLDIIKQNGIYFLDSKTSAKSVAKKIAAEKAVAFYERNVFLDGQTSKEHVKEQLRKAG 233
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWL 372
IA G++I + E +V +Q +
Sbjct: 234 AIALKDGKSIAIGHVGIEGGKVTAQAI 260
>gi|167854745|ref|ZP_02477524.1| hypothetical protein HPS_10725 [Haemophilus parasuis 29755]
gi|167854159|gb|EDS25394.1| hypothetical protein HPS_10725 [Haemophilus parasuis 29755]
Length = 281
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++ IV+ +G + AI LP + +A + +AK++G+E
Sbjct: 21 FAPLAYANKLVIVIDDIGY-RIKEDNAIYTLPKEVNVAIIPSAPYATARANKAKEQGREI 79
Query: 224 ILQIPMQAFDESYNEDDSYTL-----KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
++ +PMQ + E + + +V++ + Q ++ Y++ + N+ G+
Sbjct: 80 LIHLPMQPKVKQPIEAGALLVGMGESEVSELIHQAQQQVPYAI-------ALNNHMGSKA 132
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++K + + + K +++GL F D ++ ++ A L + ++LD+ ++
Sbjct: 133 TADKTTMQHLMKALSQQGLGFLDSKTAGDSVAYQTAKAYGLNALERHIFLDNSDVFADVQ 192
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ + + AR G AI + SI V+
Sbjct: 193 RQFQHAVQYARKHGIAIMIGHPRKHSIAVL 222
>gi|157149233|ref|YP_001456552.1| hypothetical protein CKO_05073 [Citrobacter koseri ATCC BAA-895]
gi|157086438|gb|ABV16116.1| hypothetical protein CKO_05073 [Citrobacter koseri ATCC BAA-895]
Length = 258
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+A G E ++ +PM + E D TL+ + ++ +R ++ + G+ N+
Sbjct: 4 KAHNSGHEVLIHLPMAPLSKQPLEKD--TLRPEMSSDEIERIIRDAVNKVPYAVGLNNHM 61
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + S+ + + + + L F D + + A + + ++LDD +
Sbjct: 62 GSAMTSSLFGMQKVMQALERYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNE 121
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
IR + E+AR G AI + ++ V+ Q
Sbjct: 122 ADIRRQFNRAIELARRNGSAIAIGHPHPSTVRVLQQ 157
>gi|330980647|gb|EGH78750.1| hypothetical protein PSYAP_19071 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 155
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 58/120 (48%)
Query: 269 GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYL 328
G+ N+ G+ + + + + E +R LLF +S + + A ++ L + D++L
Sbjct: 17 GINNHMGSRMTAEPVAMTWLMAELQRRHLLFVASRTSAKTVAAAEAQRIGLASVSRDVFL 76
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
DD+ + I +L+ +IAR G A+ + + +++V+ + L + V + L +
Sbjct: 77 DDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSM 136
>gi|120601972|ref|YP_966372.1| hypothetical protein Dvul_0924 [Desulfovibrio vulgaris DP4]
gi|120562201|gb|ABM27945.1| protein of unknown function DUF610, YibQ [Desulfovibrio vulgaris
DP4]
Length = 461
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 4/213 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
GA +AIV+ +G S G R + L +T A + + A + G+E ++ PM
Sbjct: 236 GALLAIVIDDIGESM-GAVRDLLKLDYPVTFAVWPRSSHAREAAEAAHRAGREVMIHQPM 294
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + + V ++ LR +L R G+ N+ G+ + +
Sbjct: 295 EPLKYPSVKPGPGAIYVRMGRDEIEATLRDNLARVPHAVGLNNHMGSRFTQDVRGVRAVC 354
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ +GL D + ++ A + LP +++LD D+ I +L +A
Sbjct: 355 EALEGKGLFVLDSVTHSGSVFYREARRAGLPAGKRNVFLDVIHDKRNIMFQLDKAARVAH 414
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
G A+ + E++ + +W + RD SV
Sbjct: 415 EQGVAVAIGHPLAETVAALKEW---QRTRDKSV 444
>gi|224437004|ref|ZP_03657985.1| hypothetical protein HcinC1_03480 [Helicobacter cinaedi CCUG 18818]
Length = 360
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAF----ASNGNSLDRWMKEAKKKGQEA 223
AS ++ +++ L S+ +A+ LP NIT + NG + + K + G+
Sbjct: 124 ASKPKVLLIMDDL--SKLSQIKALESLPLNITPSIFPKTRHNGITPN-LAKRVIQNGKIF 180
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P++A +++ + + LKV Q L ++ + + N+ G+ +K
Sbjct: 181 MIHLPLEA--QNFMQKELEPLKVGIDKQSLKEQILQIKQDFPQLVYLNNHTGSKFTQSKT 238
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + F + L F D + P + +LA + M D++LD+Q + +++L+
Sbjct: 239 DMKNLLEVFDELDLKFIDSVTIPNPASEILAKEQKRLIMQRDIFLDNQTNIAYTKKQLQS 298
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQE 375
L + A+ G AI + + + ++Q +Q+E
Sbjct: 299 LIQKAKKKGYAIAICHPHPSTFKALAQ-MQKE 329
>gi|269792105|ref|YP_003317009.1| hypothetical protein Taci_0491 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099740|gb|ACZ18727.1| protein of unknown function DUF610 YibQ [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 325
Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIVV +G + +R + L +T A + + A+ G ++ +PMQA
Sbjct: 103 LAIVVDDMGYDLSAARR-LAALRIPMTWAIIPGAPRASQVAEIARAHGIPYLVHLPMQAL 161
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + + V + + R+R + G GV N+RG+ S+ ++ K
Sbjct: 162 SDP--DGGESVIHVGMDAKDMRARVRRAFDSLPGAVGVNNHRGSAATSDSKTMGDFVKVL 219
Query: 293 A--KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD--KIREKLKGLEEIA 348
A + G F D +SPR++ R A + + + ++D R+ + +KG A
Sbjct: 220 AELRPGWFFLDSATSPRSVARKEALRRGIRSLRNGYFIDSVPGREDRALAAAVKG----A 275
Query: 349 RTTGQAIGVAVAFDESIEVISQ 370
+G A+ + ++E +S+
Sbjct: 276 LKSGGAVAIGHPRPGTLEALSR 297
>gi|289672249|ref|ZP_06493139.1| hypothetical protein PsyrpsF_03340 [Pseudomonas syringae pv.
syringae FF5]
Length = 159
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A +++++ LG +Q R + L P +TLA + + ++A + G+ +L +PM
Sbjct: 31 AYLSLIIDDLGQNQDRDSRTLAL-PGPVTLAIMPDTPHATEFARQAHRAGKTVMLHMPMD 89
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
Y L +L +RL +L + G+ N+ G+ + + + +
Sbjct: 90 PATGPYAWHPELPLP------ELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMA 143
Query: 291 EFAKRGLLFFDDGSS 305
E +R L F D +S
Sbjct: 144 ELQRRHLFFVDSRTS 158
>gi|313143477|ref|ZP_07805670.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128508|gb|EFR46125.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 354
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAF----ASNGNSLDRWMKEAKKKGQEA 223
AS ++ +++ L S+ +A+ LP NIT + NG + + K + G+
Sbjct: 118 ASKPKVLLIMDDL--SKLSQIKALESLPLNITPSIFPKTRHNGITPN-LAKRVIQNGKIF 174
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P++A +++ + + LKV Q L ++ + + N+ G+ +K
Sbjct: 175 MIHLPLEA--QNFMQKELEPLKVGIDKQSLKEQILQIKQDFPQLVYLNNHTGSKFTQSKT 232
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + F + L F D + P + +LA + M D++LD+Q + +++L+
Sbjct: 233 DMKNLLEVFDELDLKFIDSVTIPNPASEILAKEQKRLIMQRDIFLDNQTNIAYTKKQLQS 292
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQE 375
L + A+ G AI + + + ++Q +Q+E
Sbjct: 293 LIQKAKKKGYAIAICHPHPSTFKALAQ-MQKE 323
>gi|216264608|ref|ZP_03436600.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi 156a]
gi|215981081|gb|EEC21888.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi 156a]
Length = 293
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I NL + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDIFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|315618682|gb|EFU99268.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 3431]
Length = 319
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/203 (17%), Positives = 81/203 (39%), Gaps = 3/203 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E + TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEKN--TLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWL 372
I + ++ V+ Q +
Sbjct: 200 RNSSTIAIGHPHPSTVRVLQQMV 222
>gi|117625892|ref|YP_859215.1| polysaccharide deacetylase [Escherichia coli APEC O1]
gi|115515016|gb|ABJ03091.1| predicted polysaccharide deacetylase [Escherichia coli APEC O1]
Length = 277
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRMQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
>gi|1573763|gb|AAC22414.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 231
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A +EAK +G++ ++ +PMQ ED L + + Q+
Sbjct: 1 MPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQPVSAVKIEDGG--LHLGMSAAQV 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R+ + G+ N+ G+ ++ + + ++ L F D + +++ +
Sbjct: 59 NDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKI 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A + + + ++LDD + ++ + K AR G AI + +I V+ L+
Sbjct: 119 AKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLR 178
>gi|312149619|gb|ADQ29690.1| divergent polysaccharide deacetylase superfamily [Borrelia
burgdorferi N40]
Length = 293
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I NL + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKRLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|224533310|ref|ZP_03673904.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi CA-11.2a]
gi|224513475|gb|EEF83832.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi CA-11.2a]
Length = 293
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I NL + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|82779107|ref|YP_405456.1| hypothetical protein SDY_4047 [Shigella dysenteriae Sd197]
gi|81243255|gb|ABB63965.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 277
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
>gi|15595115|ref|NP_212904.1| hypothetical protein BB0770 [Borrelia burgdorferi B31]
gi|218249494|ref|YP_002375268.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi ZS7]
gi|226321469|ref|ZP_03796996.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi Bol26]
gi|2688701|gb|AAC67110.1| conserved hypothetical protein [Borrelia burgdorferi B31]
gi|218164682|gb|ACK74743.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi ZS7]
gi|226233265|gb|EEH32017.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi Bol26]
Length = 293
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I NL + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|221217888|ref|ZP_03589355.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 72a]
gi|224532631|ref|ZP_03673253.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi WI91-23]
gi|225548835|ref|ZP_03769812.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 94a]
gi|225549946|ref|ZP_03770907.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 118a]
gi|221192194|gb|EEE18414.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 72a]
gi|224512487|gb|EEF82866.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi WI91-23]
gi|225369405|gb|EEG98857.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 118a]
gi|225370438|gb|EEG99874.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 94a]
Length = 293
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I NL + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|312148129|gb|ADQ30788.1| divergent polysaccharide deacetylase superfamily [Borrelia
burgdorferi JD1]
Length = 293
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I NL + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHKNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|226320641|ref|ZP_03796200.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 29805]
gi|226233964|gb|EEH32686.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 29805]
Length = 293
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINL-LPANITL-AFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I L L N + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKINYAIIPFLPKSMSLYKRLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|74314149|ref|YP_312568.1| hypothetical protein SSON_3791 [Shigella sonnei Ss046]
gi|73857626|gb|AAZ90333.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 277
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
>gi|195941590|ref|ZP_03086972.1| hypothetical protein Bbur8_01736 [Borrelia burgdorferi 80a]
Length = 293
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINL-LPANITL-AFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I L L N + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKINYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|110807708|ref|YP_691228.1| hypothetical protein SFV_3915 [Shigella flexneri 5 str. 8401]
gi|110617256|gb|ABF05923.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 274
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 1 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 175
>gi|15804158|ref|NP_290197.1| hypothetical protein Z5041 [Escherichia coli O157:H7 EDL933]
gi|30065110|ref|NP_839281.1| hypothetical protein S4115 [Shigella flexneri 2a str. 2457T]
gi|56480388|ref|NP_709393.2| hypothetical protein SF3653 [Shigella flexneri 2a str. 301]
gi|12518367|gb|AAG58761.1|AE005589_1 hypothetical protein Z5041 [Escherichia coli O157:H7 str. EDL933]
gi|13363967|dbj|BAB37915.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|30043371|gb|AAP19092.1| hypothetical protein S4115 [Shigella flexneri 2a str. 2457T]
gi|56383939|gb|AAN45100.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|209754800|gb|ACI75712.1| hypothetical protein ECs4492 [Escherichia coli]
gi|209754802|gb|ACI75713.1| hypothetical protein ECs4492 [Escherichia coli]
gi|209754804|gb|ACI75714.1| hypothetical protein ECs4492 [Escherichia coli]
gi|209754806|gb|ACI75715.1| hypothetical protein ECs4492 [Escherichia coli]
gi|313647513|gb|EFS11963.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 2a str. 2457T]
Length = 277
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
>gi|315931831|gb|EFV10786.1| Divergent polysaccharide deacetylase family protein [Campylobacter
jejuni subsp. jejuni 327]
Length = 325
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 48/80 (60%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ SN+E+ +++ + + F D + + +A +LN+PY+ D++LD
Sbjct: 241 INNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLD 300
Query: 330 DQVDRDKIREKLKGLEEIAR 349
++ D + ++++++ ++A+
Sbjct: 301 NEDDVNYVKKQIQNAVKLAQ 320
>gi|209754798|gb|ACI75711.1| hypothetical protein ECs4492 [Escherichia coli]
Length = 277
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
>gi|323179414|gb|EFZ64981.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1180]
Length = 277
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
>gi|225551830|ref|ZP_03772773.1| divergent polysaccharide deacetylase family protein [Borrelia sp.
SV1]
gi|225371625|gb|EEH01052.1| divergent polysaccharide deacetylase family protein [Borrelia sp.
SV1]
Length = 293
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINL-LPANITL-AFASNGNSLDRWMKEAKKKGQEAILQ 226
S + +++ +G + ++ I L L N + F SL + +K A K I+
Sbjct: 71 SKPKFYLIIDDVGYDEFMLEQFIKLNLKINYAIIPFLPKSMSLYKKLKNANK---TVIIH 127
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PMQ+ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ +
Sbjct: 128 FPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDSKIMNNHMGSLITSNKDFMK 185
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ +
Sbjct: 186 IILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVIKELEKAKN 245
Query: 347 IARTTG 352
IAR G
Sbjct: 246 IARKNG 251
>gi|912478|gb|AAB18591.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
Length = 277
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQ 178
>gi|57242341|ref|ZP_00370280.1| probable periplasmic protein Cj0633 [Campylobacter upsaliensis
RM3195]
gi|57017021|gb|EAL53803.1| probable periplasmic protein Cj0633 [Campylobacter upsaliensis
RM3195]
Length = 356
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ S++E+ ++K K L F D + + +A ++ Y+ D++LD
Sbjct: 238 INNHTGSLFTSDEEAMRKLYKALDKHHLTFVDSKTIHHSKAPKIAKEMRKIYIKRDVFLD 297
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++ D D ++ +L +A+ G AI + + + + + +E ++ V +V LS L
Sbjct: 298 NEDDVDYVKNQLLNAVNLAQKRGYAIAIGHPKKNTFKALKE--SKELLKSVDLVYLSEL 354
>gi|213852179|ref|ZP_03381711.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 165
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 3/138 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 17 FAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEV 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLF 133
Query: 284 SAEVIFKEFAKRGLLFFD 301
+ + + L F D
Sbjct: 134 GMQKVMQALEHYNLYFLD 151
>gi|82545982|ref|YP_409929.1| hypothetical protein SBO_3620 [Shigella boydii Sb227]
gi|81247393|gb|ABB68101.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 277
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E + TL+ + ++
Sbjct: 4 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKN--TLRPEMSSDEI 61
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 62 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 121
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 122 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVLQQ 178
>gi|114776726|ref|ZP_01451769.1| hypothetical protein SPV1_10941 [Mariprofundus ferrooxydans PV-1]
gi|114552812|gb|EAU55243.1| hypothetical protein SPV1_10941 [Mariprofundus ferrooxydans PV-1]
Length = 311
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 4/204 (1%)
Query: 154 DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRW 212
D V A + A IA+++ G QR + L +P + +A + +
Sbjct: 59 DEPVQAPEPEISDAGKAAGIALILDDAGYDLPELQRMLKLGVP--VAIAVIPDAPYARQA 116
Query: 213 MKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF-GVM 271
A + G +L +PMQ E Y+ S Q + L R + Y GV
Sbjct: 117 AVMAHQAGHVVMLHLPMQPVSEKYSSRMSDAFLTDQMNEMQLRRTFINDLALVPYVEGVN 176
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ L ++ + + ++GL F D +S +++ +A ++ L +LD+
Sbjct: 177 NHMGSALTQLEKPMHWVMQVCLEKGLFFVDSVTSGKSVAGRVATEMGLERGRRQFFLDNN 236
Query: 332 VDRDKIREKLKGLEEIARTTGQAI 355
+D ++ + + AR + +
Sbjct: 237 LDTPALKAMWEKVRICARKGHRCV 260
>gi|223889391|ref|ZP_03623977.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 64b]
gi|223885077|gb|EEF56181.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 64b]
Length = 293
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/180 (17%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 175 IVVSGLGISQTGTQRAI--NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+++ +G + ++ I NL + F SL + +K A K I+ PMQ+
Sbjct: 77 LIIDDVGYDEFMLEQFIKLNLKITYAIIPFLPKSMSLYKKLKNANK---TVIIHFPMQS- 132
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++I ++
Sbjct: 133 -KHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKIILEKL 191
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ FFD + ++ ++ ++ + D++LD + + + ++L+ + IAR G
Sbjct: 192 KEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNIARKNG 251
>gi|218962072|ref|YP_001741847.1| hypothetical protein CLOAM1809 [Candidatus Cloacamonas
acidaminovorans]
gi|167730729|emb|CAO81641.1| conserved hypothetical protein [Candidatus Cloacamonas
acidaminovorans]
Length = 262
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 2/173 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ I++ G + + LP I + + + A+K E ++ IPMQA
Sbjct: 38 VVIIIDDFGQNAGQLLDDFSALPKEIAFSILPDLPYTQTVARLAEKTNHETLIHIPMQAL 97
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N Y ++ + + L+ + N+ G+ + S+ + +I +E
Sbjct: 98 DHQANPGKRY-IRTGMDKYAISDLLQDFYAQIPNAIAANNHMGSEVTSDLATMNIILEEL 156
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK-IREKLKGL 344
GL F D ++ ++ L L D++LD + D I K++GL
Sbjct: 157 DNLGLYFLDSATTNKSAAFTAGKNLGLKIAKRDIFLDVPDNSDATIINKIEGL 209
>gi|315638452|ref|ZP_07893629.1| periplasmic protein [Campylobacter upsaliensis JV21]
gi|315481443|gb|EFU72070.1| periplasmic protein [Campylobacter upsaliensis JV21]
Length = 334
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
+ N+ G++ S++E+ ++K K L F D + + +A ++ Y+ D++LD
Sbjct: 216 INNHTGSLFTSDEEAMRKLYKALDKHHLSFVDSKTIHNSKAPKIAKEMQKIYIKRDVFLD 275
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++ D D ++ +L +A+ G AI + + + + + +E ++ V +V LS L
Sbjct: 276 NEDDVDYVKNQLLSAVNLAQKRGYAIAIGHPKKNTFKALKE--SKELLKSVDLVYLSEL 332
>gi|254360760|ref|ZP_04976908.1| hypothetical protein MHA_0322 [Mannheimia haemolytica PHL213]
gi|153091330|gb|EDN73304.1| hypothetical protein MHA_0322 [Mannheimia haemolytica PHL213]
Length = 281
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 5/212 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A++AIV+ +G + R I LP +++A K+A + ++
Sbjct: 21 FTPLVQAAQMAIVIDDVGY-RIKEDREILALPKAVSVAIIPVAPYATERAKDAYNQKRDI 79
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMNYRGAMLLSNK 282
++ +PM+ + E+ + + + + +L ++ R Y G+ N+ G+ S+
Sbjct: 80 LIHLPMEPKSKQPIEEGGIHIGDNE---EKIRKLIHTSRGQVPYAIGLNNHMGSGATSDS 136
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + K + L F D + ++ A + + + D++LDD ++++
Sbjct: 137 ATMQHLLKVLKENTLFFLDSKTIGSSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFA 196
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
AR G A+ + +I V+ Q L Q
Sbjct: 197 HAINHARKNGVAVVIGHPRKNTISVLKQNLAQ 228
>gi|330954793|gb|EGH55053.1| hypothetical protein PSYCIT7_26251 [Pseudomonas syringae Cit 7]
Length = 135
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 55/116 (47%)
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 1 HMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDER 60
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ I +L+ +IAR G A+ + + +++V+ + L + V + L +
Sbjct: 61 TAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSM 116
>gi|152978251|ref|YP_001343880.1| protein of unknown function DUF610 YibQ [Actinobacillus
succinogenes 130Z]
gi|150839974|gb|ABR73945.1| protein of unknown function DUF610 YibQ [Actinobacillus
succinogenes 130Z]
Length = 294
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/218 (17%), Positives = 100/218 (45%), Gaps = 4/218 (1%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
V A F + A ++AIV+ +G + I +P +++A + ++A
Sbjct: 29 VSAQPARFVA-AQPHKLAIVIDDIGYHPKEDAQ-ILAMPKAVSVAIIPVAPYAAQRNRQA 86
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
++G++ ++ +PMQ + E+ ++ ++Q Q++ R++ + + + G+ N+ G+
Sbjct: 87 WQQGRDILIHMPMQPVNNMKIEEGGLSVGMSQ--QEVEQRVQRAKQIVSHAIGMNNHMGS 144
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ + + ++GL F D + +++ +A + + ++LDD +
Sbjct: 145 AATADPTLMTRLMRILQRQGLFFLDSRTIGKSVAGKIAKLEGVSVLERHVFLDDSDNFGD 204
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
++ + + + AR G AI + +I V+ L+
Sbjct: 205 VQRQFQRALQHARQHGVAIVIGHPRKNTIAVLQAELRH 242
>gi|296127488|ref|YP_003634740.1| hypothetical protein Bmur_2471 [Brachyspira murdochii DSM 12563]
gi|296019304|gb|ADG72541.1| protein of unknown function DUF610 YibQ [Brachyspira murdochii DSM
12563]
Length = 302
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 28/214 (13%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL-------------PANITLAFAS 204
P +D S I+I++ G + T+R L P +I ++A+
Sbjct: 67 PILDNIIKPIESSNFISIIIDDSGNTLDYTERYFKLAYEYGITFAVLPDSPHSIDFSYAA 126
Query: 205 NGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRG 264
N +D IL +PM+ D + ++ ++ N L YS +
Sbjct: 127 YSNDVD------------VILHMPMEGSDYF---GEKTIIRTGMNKDEVFNLLDYSFSKV 171
Query: 265 TGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVA 324
G+ N+ G++ + + F D +S +L LA + N+
Sbjct: 172 PYANGMNNHTGSLACKDINIVSYMIDYAKNNNKYFVDSYTSAESLIYDLALENNVRTAKR 231
Query: 325 DLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
+++LD+ D D I ++ + L ++++ G AIG+
Sbjct: 232 NVFLDNDRDYDSIMKQWRELIKLSKEYGIAIGIG 265
>gi|294102438|ref|YP_003554296.1| protein of unknown function DUF610 YibQ [Aminobacterium colombiense
DSM 12261]
gi|293617418|gb|ADE57572.1| protein of unknown function DUF610 YibQ [Aminobacterium colombiense
DSM 12261]
Length = 343
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 7/188 (3%)
Query: 173 IAIVVSGLGISQTGTQR--AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
IAIV+ G S + ++ AI+L +T A + A K ++ +PM+
Sbjct: 121 IAIVIDDFGFSYSLAEKIAAIDL---PVTWAIIPYQRFTHETARLAASKNIPYLVHMPME 177
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
A + + + V + L +R G G+ N+RG+ S+K++ E + +
Sbjct: 178 ALAD--KSQGASLIGVGMSAPALSKVVRDVFALLPGAVGMNNHRGSKATSDKKTMEALME 235
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+F D +S ++ +A +P + ++LD + D + +R++ + IA+
Sbjct: 236 TLRPLEKVFVDSRTSSCSVAYDMALCYGIPAVYNSVFLDHEKDIEFMRKQFQRAITIAKR 295
Query: 351 TGQAIGVA 358
G + +
Sbjct: 296 RGWVLAIC 303
>gi|332298458|ref|YP_004440380.1| protein of unknown function DUF610 YibQ [Treponema brennaborense
DSM 12168]
gi|332181561|gb|AEE17249.1| protein of unknown function DUF610 YibQ [Treponema brennaborense
DSM 12168]
Length = 355
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDS--YTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
K + G+E +L PMQA + + N + V++LL+ +L++ G+
Sbjct: 175 KRVRAAGKELLLHQPMQAKNLAVNPGPGAIHPDMDRDAVRKLLHS---NLQKIGPVAGMN 231
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+++ + + + A G+ F D ++ +A + D++LD+
Sbjct: 232 NHEGSLITESVTQMDAVLDVCAAEGIFFLDSRTTADTQVPAVAAARGMKIWERDIFLDNT 291
Query: 332 VDRDKIREKLKGLEEIARTTGQAI 355
DR I ++L IA G A+
Sbjct: 292 PDRRDILDQLYRGAAIANKKGYAV 315
>gi|58038808|ref|YP_190772.1| hypothetical protein GOX0333 [Gluconobacter oxydans 621H]
gi|58001222|gb|AAW60116.1| Hypothetical protein GOX0333 [Gluconobacter oxydans 621H]
Length = 266
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 86/225 (38%), Gaps = 18/225 (8%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IAIV+ G G S T ++ +PA + + + +++ + A +E + +PMQ+
Sbjct: 31 IAIVLQGFGYSDALTYDVLSRIPAPVAVGISPYVSNISDIIARAHASHREVYVTLPMQSA 90
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR-------GAMLLSNKESA 285
++ + L + L + L R G G+ + G ++ + +
Sbjct: 91 HPERVDEGPHALGYGNSAADDQRELEWCLSRAAGAEGLTDASENGDDQPGGGYATSPDFS 150
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG-L 344
I + +GLL+ + TR M A ++D D + +L L
Sbjct: 151 P-IASAISSKGLLYLAGSAQDGRRTR---------GMTATAWIDGDTDAATLDSRLAALL 200
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ + + V I+ ++ WL+ ++ VVP S A
Sbjct: 201 PQDGKPAKILLMVGPITPVMIDRLANWLKGPAAQNFVVVPPSAFA 245
>gi|152992040|ref|YP_001357761.1| hypothetical protein SUN_0444 [Sulfurovum sp. NBC37-1]
gi|151423901|dbj|BAF71404.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 354
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLL 254
P+++++ + SL +M + +PM++ +N+ TLK + T Q+
Sbjct: 171 PSHLSMKSHTLAKSLKHYM-----------IHLPMESGSRQFNKQYK-TLKTSFTKSQME 218
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
R+R + + N+ G++ + ++ ++ K G +F D + R +A
Sbjct: 219 ARIREIRQLFPTARYINNHTGSVFTDDYKAMHTLYGIMKKEGFIFIDSRTIGTTKVRKIA 278
Query: 315 PKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
K Y+ D+++D+ I +LK +IA+ G AI +
Sbjct: 279 YKYGDAYVARDIFIDNTQSIPYIHNQLKKAVKIAKKKGYAIAIG 322
>gi|300742559|ref|ZP_07072580.1| putative integral membrane protein [Rothia dentocariosa M567]
gi|300381744|gb|EFJ78306.1| putative integral membrane protein [Rothia dentocariosa M567]
Length = 406
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY--MVADLY--LDDQVDRD 335
S++E AE KE G + F +G++P +T AP N M+ + ++ QV +
Sbjct: 78 SSREDAERQIKERETYGAIVFTEGAAPEVMT---APAANASANQMLTGVAQQMNAQVQQK 134
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
K + L++ + G+ +A E ++ + LQQ V+ +VVPL
Sbjct: 135 ATAAKTQALQQAVQAGGEQGAIATQQLEQLKTEQEKLQQAQVKTTAVVPLG 185
>gi|213023020|ref|ZP_03337467.1| hypothetical protein Salmonelentericaenterica_10610 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 133
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + T+ + LP NI++A N +A G E ++ +PM
Sbjct: 7 AGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEVLIHLPM 65
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + ++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 66 APLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVM 123
Query: 290 KEFAKRGLLF 299
+ L F
Sbjct: 124 QALEHYNLYF 133
>gi|237802213|ref|ZP_04590674.1| hypothetical protein POR16_25584 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025070|gb|EGI05126.1| hypothetical protein POR16_25584 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 130
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 48/101 (47%)
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ E +R L F D +S + + A ++ L + D++LDD+ + I +L+ E+
Sbjct: 11 LMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIEL 70
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A G + + + +++V+ + L + + V + L +
Sbjct: 71 AHKQGSVVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSM 111
>gi|315633408|ref|ZP_07888699.1| exported polysaccharide deacetylase [Aggregatibacter segnis ATCC
33393]
gi|315477908|gb|EFU68649.1| exported polysaccharide deacetylase [Aggregatibacter segnis ATCC
33393]
Length = 275
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ LG I +P +++A + ++A ++G++ ++ +
Sbjct: 21 AYSAKLAIVIDDLGY-HAKEDAQILAMPKAVSVAIIPAAPYAKQRNQQAFQQGRDILIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + ED L ++Q ++ +R++ + + G+ N+ G+ ++
Sbjct: 80 PMETQSKMKIEDGGLHLGMSQG--EVNHRVQTAHNIVSNAIGMNNHMGSAATADGPLMTK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +R L F D + R++ +A + + + ++LDD ++ + + +
Sbjct: 138 LMTALRERHLSFLDSRTIGRSVAGKMAKEQGVRTLDRHIFLDDSDAFADVQRQFQAAVQY 197
Query: 348 ARTTGQAIGVAVAFDESIEVI 368
A+ G AI + +I V+
Sbjct: 198 AQKHGIAIAIGHPRKNTIAVL 218
>gi|195132416|ref|XP_002010639.1| GI21654 [Drosophila mojavensis]
gi|269969675|sp|B4L535|SWS_DROMO RecName: Full=Neuropathy target esterase sws; AltName: Full=Swiss
cheese
gi|193907427|gb|EDW06294.1| GI21654 [Drosophila mojavensis]
Length = 1488
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ NA G+ +++ G S T I++L +GNS AK +
Sbjct: 223 YICNADGSTLSLKTVRKGESVTSLLSFIDVL----------SGNSSYYKTVTAKAMEKSV 272
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
++++PMQAF+E +NE+ ++V Q + L R+ ++ R Y G+
Sbjct: 273 VIRLPMQAFEEVFNENPDVMIRVIQVIMIRLQRVLFTALR--NYLGL 317
>gi|119953544|ref|YP_945754.1| cation transport ATPases [Borrelia turicatae 91E135]
gi|119862315|gb|AAX18083.1| cation transport ATPases [Borrelia turicatae 91E135]
Length = 303
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/151 (18%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 208 SLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
S+D + K A K + ++ +PMQ+ + N + + + + + ++ + + +
Sbjct: 109 SMDFYNKLASK-NKIIMIHLPMQS--KYKNSIEKFHININDNEFAIRTKIEKTFQTYSNA 165
Query: 268 FGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
+ N+ G+++ +N+ ++I + + FFD ++ ++++ + K+ + D++
Sbjct: 166 KIMNNHMGSLITANENIMQIILIKLKEENRYFFDSLTTQKSISAKIGKKIGIIVEQRDIF 225
Query: 328 LDDQVDRDKIREKLKGLEEIARTTG--QAIG 356
LD++ + + + L+ ++IART G + IG
Sbjct: 226 LDNKDNEKAVIKALERAKQIARTKGIVKVIG 256
>gi|255524928|ref|ZP_05391876.1| transcriptional regulator, LysR family [Clostridium carboxidivorans
P7]
gi|255511406|gb|EET87698.1| transcriptional regulator, LysR family [Clostridium carboxidivorans
P7]
Length = 263
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
S++ + +++ IS + NKP R S++ +E ++L + K LAK + E P
Sbjct: 85 SAEIEKNVKDGISDLVIFNKPNRKLSLEYEVIHQEEMLLVMHKDHPLAKKGMKIEGLRYP 144
Query: 159 AMDKNFCSNAS 169
MD C N +
Sbjct: 145 WMDIRLCKNEA 155
>gi|254457290|ref|ZP_05070718.1| putative periplasmic protein [Campylobacterales bacterium GD 1]
gi|207086082|gb|EDZ63366.1| putative periplasmic protein [Campylobacterales bacterium GD 1]
Length = 334
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 115/267 (43%), Gaps = 20/267 (7%)
Query: 107 QNDISGKTVVNKPTR---------STSIDSLPTIEERLILGLSKKELLAKNKVGRE--DT 155
+NDI +T ++K R +TS ++ RL L K+ + E D
Sbjct: 44 KNDIENQTAIDKKKRLSMLQKLEIATSKKDKSSVNTRLKDVLKKESKIDTGAAAHEYGDG 103
Query: 156 EVP----AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDR 211
+P A ++ +S ++AI++ + + AI L +T++F
Sbjct: 104 TLPEPPEAPKRDVIRTSSKPKLAIIIDDVSVR--SHVNAIKSLGIPLTMSFLPPSKLRPN 161
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
K A K+ ++ +PM+A ++++ ++ TL+++ + ++ R++ + +
Sbjct: 162 SAKLADKENV-YMVHLPMEA--QNFSAEEPMTLRISDSDFKISQRVKDIKKEFPRVSYIN 218
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ SN+ + + + F D ++ + L L Y+ D++LD
Sbjct: 219 NHTGSKFTSNELAMNRLIYALKSEDINFIDSRTTADTKAPTVMKNLGLNYVARDVFLDHT 278
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVA 358
+D+ I ++K ++A+ G AI +
Sbjct: 279 MDKVSIIIQIKKAIQVAKLHGTAIAIG 305
>gi|325576789|ref|ZP_08147404.1| divergent polysaccharide deacetylase [Haemophilus parainfluenzae
ATCC 33392]
gi|325160995|gb|EGC73113.1| divergent polysaccharide deacetylase [Haemophilus parainfluenzae
ATCC 33392]
Length = 280
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/203 (16%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++AIV+ +G + + P I++A +EAK + + ++ +PMQ
Sbjct: 28 GKLAIVIDDIGYHPKEDAEVLAM-PKEISVAIIPAAPYAKIRNQEAKAQNHDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
E+ TL +++ Q+ R++ + G+ N+ G+ ++ +
Sbjct: 87 PVSNIKIEEGGLTLGLSEA--QVNERVKKAKAIVPNAIGMNNHMGSAATADATLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + + + AR
Sbjct: 145 ALREQHLFFLDSRTIGKSVAGKIAKEQGVRVLDRHIFLDDSDNLVDVQRQFQSAIQYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + ++ V+ ++
Sbjct: 205 HGTAIAIGHPRPNTVAVLKSGIK 227
>gi|268679505|ref|YP_003303936.1| hypothetical protein Sdel_0870 [Sulfurospirillum deleyianum DSM
6946]
gi|268617536|gb|ACZ11901.1| protein of unknown function DUF610 YibQ [Sulfurospirillum
deleyianum DSM 6946]
Length = 381
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAF--ASNGNSLDRWMKEAKKKGQE---AILQ 226
++AI++ +S R + +P +T AF + G+ E + E A++
Sbjct: 172 KLAIIIDD--VSFPWQTRLMKEIPYKVTPAFFPPTKGHP------ETVRLSHEFPFAMVH 223
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR----GAMLLSNK 282
+P++A S E+D TL T ++ + R++ R +F ++Y G ++
Sbjct: 224 LPLEAKYYSRPEED--TLNTTDSLDVIEKRIK----RIKAWFPHIHYYNNHTGGYFTADY 277
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMV----ADLYLDDQVDRDKIR 338
+ + + K L F D R + AP++ Y + D++LD+ +++ IR
Sbjct: 278 AAMDRLIKVMKDHNLSFVDS----RTVGNSKAPEVMKKYGMFLYSRDVFLDNSLEKSAIR 333
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
++LK A+ G AI + ++EV+
Sbjct: 334 KQLKEAVFKAKKYGYAIAIGHPHKNTLEVL 363
>gi|224534597|ref|ZP_03675173.1| divergent polysaccharide deacetylase family protein [Borrelia
spielmanii A14S]
gi|224514274|gb|EEF84592.1| divergent polysaccharide deacetylase family protein [Borrelia
spielmanii A14S]
Length = 288
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 172 RIAIVVSGLGISQTGTQRAINL-LPANITLA-FASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L L N + F SL K+ K + I+ PM
Sbjct: 69 KFYLIIDDVGYDEFMLEQFIKLNLEINYAIIPFLPKSTSL---YKKLKNNNKAVIIHFPM 125
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q+ + N + + + + +++ ++ + + + N+ G+++ SNK+ +I
Sbjct: 126 QS--KHRNAIEKFHINIKDKKEEIHKKIEKTFKMYPDVKIMNNHMGSLITSNKDLMRIIL 183
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ ++ ++ + D++LD + ++ + +L+ + IAR
Sbjct: 184 IKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDSKDTKEAVLNELEKAKNIAR 243
Query: 350 TTG--QAIG 356
G + IG
Sbjct: 244 KHGIVKVIG 252
>gi|301155117|emb|CBW14581.1| predicted polysaccharide deacetylase [Haemophilus parainfluenzae
T3T1]
Length = 280
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/203 (16%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++AIV+ +G I +P I++A ++AK + + ++ +PMQ
Sbjct: 28 GKLAIVIDDIG-YHPKEDAEILAMPKEISVAIIPAAPYAKIRNQQAKAQNHDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
E+ TL +++ Q+ R++ + G+ N+ G+ ++ +
Sbjct: 87 PVSNIKIEEGGLTLGLSEA--QVNERVKKAKSIVPNAIGMNNHMGSAATADTTLMTYLMS 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + + + AR
Sbjct: 145 ALREQHLFFLDSRTIGKSVAGKIAKEQGVRVLDRHIFLDDSDNLVDVQRQFQNAIQYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQ 373
G AI + ++ V+ ++
Sbjct: 205 HGTAIAIGHPRPNTVAVLKSGIK 227
>gi|212705014|ref|ZP_03313142.1| hypothetical protein DESPIG_03082 [Desulfovibrio piger ATCC 29098]
gi|212671566|gb|EEB32049.1| hypothetical protein DESPIG_03082 [Desulfovibrio piger ATCC 29098]
Length = 422
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 10/197 (5%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF---DESYNEDDSYTLKVTQTV 250
LP + LA + + A+ G + +L +PM+A + + L+
Sbjct: 212 LPFPVALALWPHAAVRRSVQQVARDMGLDVLLHMPMEAMPRKNGTAPNPGPGALETDMDA 271
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+ + L +L + G N+ G+ +++ ++ RGL D S R +
Sbjct: 272 YAMEHALDKALAQVPTALGFNNHMGSGFTGQRDACRMLAGLAYGRGLFVLD--SVTRGNS 329
Query: 311 RVLAPKLNLPYMVA--DLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
++ + + A ++LDD DK+ L +AR G AI + ++ +
Sbjct: 330 QLENSMVRQGIVTASRHVFLDDPQGTDKVLAALDKAARLARKQGIAIAIGHPHASTLRAL 389
Query: 369 SQWLQQEHVRDVSVVPL 385
+W +E V+VVPL
Sbjct: 390 ERWENRE---GVAVVPL 403
>gi|225619872|ref|YP_002721129.1| putative divergent polysaccharide deacetylase [Brachyspira
hyodysenteriae WA1]
gi|225214691|gb|ACN83425.1| putative divergent polysaccharide deacetylase [Brachyspira
hyodysenteriae WA1]
Length = 302
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 27/220 (12%)
Query: 150 VGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL-PANITLAFASNGNS 208
V DT P ++K N I+I++ G + + R L NIT A +
Sbjct: 66 VNSPDTAKPILNK---INEHSNCISIIIDDSGNTLDNSDRYFYLANEYNITFAVLPDSYH 122
Query: 209 LDRWMKEAKKKGQEAILQIPMQAFD---------ESYNEDDSYTLKVTQTVQQLLNRLRY 259
+ A IL IPM+ D + NED+ + L L Y
Sbjct: 123 STDFSYAAYSNNVNIILHIPMEGSDYFGEQTLIRKGMNEDEIFRL------------LDY 170
Query: 260 SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN-LTRVLAPKLN 318
S + G+ N+ G+ + S+ ES ++AK +F D + + L +A +
Sbjct: 171 SFSKVPYANGMNNHTGS-VASSDESVVSYMLDYAKNNDKYFVDSYTVSDSLIYDMAIEYG 229
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
+ ++LD++ D I ++ + L ++++ G A+G+
Sbjct: 230 VKTARRSVFLDNERDHSSIMKQWRELIKLSKEYGIAVGIG 269
>gi|256827728|ref|YP_003151687.1| NlpC/P60 family protein [Cryptobacterium curtum DSM 15641]
gi|256583871|gb|ACU95005.1| NlpC/P60 family protein [Cryptobacterium curtum DSM 15641]
Length = 371
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 207 NSLDRWMKEAKKKGQEAILQ--IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRG 264
N++ + EA K QEA+ + QA DE+ + D T +TQ ++L R+R R G
Sbjct: 63 NAMQDSLDEASDKYQEALDEQNAAQQAMDEAQRQVDEATANITQMQKRLSTRVRSMYRTG 122
Query: 265 TGYF 268
+G F
Sbjct: 123 SGTF 126
>gi|325289668|ref|YP_004265849.1| protein of unknown function DUF610 YibQ [Syntrophobotulus
glycolicus DSM 8271]
gi|324965069|gb|ADY55848.1| protein of unknown function DUF610 YibQ [Syntrophobotulus
glycolicus DSM 8271]
Length = 282
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+IA+++ G ++ G I + ++T A EA K+G E I+ +PMQ+
Sbjct: 59 KIAVIIDDFGEARDGVNE-IMKIKKHLTFAVMPFLTYTTSDATEAHKRGYEVIVHMPMQS 117
Query: 232 FD-ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
++ N + + + ++ + S+ GV + G++ N+ + +
Sbjct: 118 QTVDNINWLGRRPIMLKTSNDEIKKIAKESIDSVPHAVGVNIHMGSLASQNERVISNVME 177
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD-RDKIREKLKGLEEIAR 349
R L F D ++P + + +A + + ++ +++L+ + I +L E+A
Sbjct: 178 VVKARNLYFVDSRTTPNTVCKAVAKRFGVKFLQRNIFLEHSSKTKGYIEGQLVEAGELAL 237
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQ 374
G A+ + E + +Q L++
Sbjct: 238 KEGYAVVIGHVGAEGGAITAQVLEE 262
>gi|212632982|ref|YP_002309507.1| hypothetical protein swp_0073 [Shewanella piezotolerans WP3]
gi|212554466|gb|ACJ26920.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 247
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
+A+ LP ++TL+ +A ++G E ++ +PMQA + + T +++
Sbjct: 34 KAVLALPPSVTLSVLPLTPLGKAVATKAHQQGSEILVHLPMQALNGKTIGPGALTNAMSE 93
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
Q +L ++ G N+ G++L + + +R + F D ++
Sbjct: 94 --QDFKLQLEQAIDSVPFASGANNHMGSLLTQLDKPMHWVMDTLLQRDIYFIDSVTTKFT 151
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA--FDESIE 366
+A + +P + ++LD+ D+ +L+ + IA T Q V +A + E++
Sbjct: 152 QAGAVAESVGVPLLKRTIFLDN--DKTDAGLELQFQKAIALTKTQTDVVVIAHPYPETLT 209
Query: 367 VISQWLQQEHVRDVSVVPLSCL 388
++ L + ++++VP S L
Sbjct: 210 FLNNNLHRLAQANIALVPPSKL 231
>gi|157816414|gb|ABV82201.1| GH25996p [Drosophila melanogaster]
Length = 1425
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ SNA G+ +++ G S T I++L N + ++++
Sbjct: 222 YISNADGSTLSLKTVRKGESVTSLLSFIDVLSGNPSYYKTVTAKAIEK----------SV 271
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
++++PMQAF+E + ++ ++V Q + L R+ ++ R YFG+
Sbjct: 272 VIRLPMQAFEEVFQDNPDVMIRVIQVIMIRLQRVLFTALR--NYFGL 316
>gi|111115601|ref|YP_710219.1| hypothetical protein BAPKO_0818 [Borrelia afzelii PKo]
gi|110890875|gb|ABH02043.1| hypothetical protein BAPKO_0818 [Borrelia afzelii PKo]
Length = 293
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/183 (17%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINL-LPANITLA-FASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L L N + F SL K+ K + I+ PM
Sbjct: 74 KFYLIIDDVGYDEFMLEQFIKLNLEINYAIIPFLPKSTSL---YKKLKNNNKTVIIHFPM 130
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q+ + N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 131 QS--KHRNAIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIIL 188
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ ++ ++ + D++LD + + + ++L+ + IAR
Sbjct: 189 IKLKEIDRYFFDSVTIAGSIPEIIGKEIGVRVEKRDVFLDSKDTEEAVLKELEKAKNIAR 248
Query: 350 TTG 352
G
Sbjct: 249 KHG 251
>gi|51599020|ref|YP_073208.1| hypothetical protein BG0793 [Borrelia garinii PBi]
gi|51573591|gb|AAU07616.1| conserved hypothetical protein [Borrelia garinii PBi]
Length = 288
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/145 (17%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
K+ K + I+ PMQ+ + N + + + + +++ ++ + + + N+
Sbjct: 110 KKLKNNNKTIIIHFPMQS--KHRNSIEKFHINIKDKKEEIYKKIEKTFKMYPDAKIMNNH 167
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+++ SNK+ ++I + + FFD + ++ ++ ++ + D++LD++
Sbjct: 168 MGSLITSNKDLMKIILIKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDNKDT 227
Query: 334 RDKIREKLKGLEEIARTTG--QAIG 356
+ + ++L+ + IAR G + IG
Sbjct: 228 EESVLKELEKAKNIARKHGIVKVIG 252
>gi|187918622|ref|YP_001884187.1| cation transport ATPases [Borrelia hermsii DAH]
gi|119861470|gb|AAX17265.1| cation transport ATPases [Borrelia hermsii DAH]
Length = 297
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 44/81 (54%)
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+++ SN++ ++I + + FFD ++ +++ + + D++LD++
Sbjct: 175 NHMGSLITSNEDIMQIILIKLKEENRYFFDSLTTQESISEKTGKNIGILVEQRDIFLDNK 234
Query: 332 VDRDKIREKLKGLEEIARTTG 352
+ + + LK ++IART G
Sbjct: 235 DNEKAVIQALKRAKQIARTKG 255
>gi|291279748|ref|YP_003496583.1| hypothetical protein DEFDS_1366 [Deferribacter desulfuricans SSM1]
gi|290754450|dbj|BAI80827.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 357
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 55/114 (48%)
Query: 269 GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYL 328
G N+ G+ L ++E + E +F D +S + + + KLN+ + + ++
Sbjct: 236 GANNHMGSALTESREKMFEVLNELKNYTDIFVDSHTSSKTVAYNVCKKLNMRCGLNNKFI 295
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
D+ D++ I+E L + + + I + + +IEV+S+ L + +++ +
Sbjct: 296 DNIDDKNSIKEILYKSLSLFQKQDKVIIIGHLKENTIEVLSEELPKISKKNIKI 349
>gi|216263687|ref|ZP_03435682.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
afzelii ACA-1]
gi|215980531|gb|EEC21352.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
afzelii ACA-1]
Length = 293
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/183 (17%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINL-LPANITLA-FASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L L N + F SL K+ K + I+ PM
Sbjct: 74 KFYLIIDDVGYDEFMLEQFIKLNLEINYAIIPFLPKSTSL---YKKLKNNNKTVIIHFPM 130
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q+ + N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 131 QS--KHRNAIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIIL 188
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ ++ ++ + D++LD + + + ++L+ + IAR
Sbjct: 189 IKLKEIDRYFFDSVTIAGSIPEIIGKEIGVRVEKRDVFLDSKDTEEAVLKELEKAKNIAR 248
Query: 350 TTG 352
G
Sbjct: 249 KHG 251
>gi|219684182|ref|ZP_03539126.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii PBr]
gi|219672171|gb|EED29224.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii PBr]
Length = 292
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/145 (17%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
K+ K + I+ PMQ+ + N + + + + +++ ++ + + + N+
Sbjct: 114 KKLKNNNKTIIIHFPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNH 171
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+++ SNK+ ++I + + FFD + ++ ++ ++ + D++LD++
Sbjct: 172 MGSLITSNKDLMKIILIKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDNKDT 231
Query: 334 RDKIREKLKGLEEIARTTG--QAIG 356
+ + ++L+ + IAR G + IG
Sbjct: 232 EESVLKELEKAKNIARKHGIVKVIG 256
>gi|219685601|ref|ZP_03540417.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii Far04]
gi|219672879|gb|EED29902.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii Far04]
Length = 292
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/145 (17%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
K+ K + I+ PMQ+ + N + + + + +++ ++ + + + N+
Sbjct: 114 KKLKNNNKTIIIHFPMQS--KHRNSIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNH 171
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+++ SNK+ ++I + + FFD + ++ ++ ++ + D++LD++
Sbjct: 172 MGSLITSNKDLMKIILIKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDNKDT 231
Query: 334 RDKIREKLKGLEEIARTTG--QAIG 356
+ + ++L+ + IAR G + IG
Sbjct: 232 EESVLKELEKAKNIARKHGIVKVIG 256
>gi|218961345|ref|YP_001741120.1| hypothetical protein CLOAM1042 [Candidatus Cloacamonas
acidaminovorans]
gi|167730002|emb|CAO80914.1| hypothetical protein CLOAM1042 [Candidatus Cloacamonas
acidaminovorans]
Length = 357
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 27/249 (10%)
Query: 161 DKNFCSNASGAR-IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
D N N R I IVV G L + + + MK AK++
Sbjct: 118 DNNLYRNKQKKRTITIVVDDFGTIGGDLLTGFLALDKEVCFSIFPEEEYSVQTMKLAKEQ 177
Query: 220 GQEAILQIPMQ--AFDE----------SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
G+ ++ IPM+ + E Y+E ++ + + + + +L Y +
Sbjct: 178 GRLTLIHIPMEPIGYPEVNPGKNPILVQYDER-----QIEKIMTRFIEQLPYCV------ 226
Query: 268 FGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
G N+ G++ +++E + K F D ++ ++ +A K +L DL+
Sbjct: 227 -GANNHMGSLATTDEEVMNSVMAILKKHNKFFLDSRTTNVSVAYSVAQKNHLKSYRNDLF 285
Query: 328 LDD-QVDRDKIREKLKGLEEIARTTGQAIGVAVAFD-ESIEVISQWLQQEHVRDVSVVPL 385
LD + + + KL + E++ I + + + ++ + +++ + +++PL
Sbjct: 286 LDSPNISQSTMDAKLNQIIELSNRNQNVIAITHCHNYDKLDYLKRFINRLKAAGFTLIPL 345
Query: 386 SCLAKLSSP 394
+ + K + P
Sbjct: 346 TDIDKYNVP 354
>gi|169602553|ref|XP_001794698.1| hypothetical protein SNOG_04280 [Phaeosphaeria nodorum SN15]
gi|111066920|gb|EAT88040.1| hypothetical protein SNOG_04280 [Phaeosphaeria nodorum SN15]
Length = 395
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
+D+Y + V L N LRY+++ F V + L + F+ +RG L
Sbjct: 76 EDTYAASFQKLVNALFNNLRYNVKVSHSAFRVFKSKAQQLKDKYQRMFENFESHRERGEL 135
Query: 299 FFDDGSSP 306
F+DD +P
Sbjct: 136 FYDDMDNP 143
Searching..................................................done
Results from round 2
>gi|254780558|ref|YP_003064971.1| hypothetical protein CLIBASIA_02225 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040235|gb|ACT57031.1| hypothetical protein CLIBASIA_02225 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 396
Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats.
Identities = 396/396 (100%), Positives = 396/396 (100%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY
Sbjct: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT
Sbjct: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL
Sbjct: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD
Sbjct: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
Query: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF
Sbjct: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
Query: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA
Sbjct: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS
Sbjct: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
>gi|209551457|ref|YP_002283374.1| hypothetical protein Rleg2_3886 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537213|gb|ACI57148.1| protein of unknown function DUF610 YibQ [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 397
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 145/409 (35%), Positives = 209/409 (51%), Gaps = 30/409 (7%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMI 58
M DL+ PL + ++ + RLG + C F I G S+Y AF G E
Sbjct: 1 MGTDLHAPLGRN--RKAGSRRPGVLRLGRIAASLCLFAIGGFSLYT----AFRGDGLERT 54
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVN 117
+ A P P P N + + + ++ ++G +VV
Sbjct: 55 KPPA-EQAATPPSNTP-------QPPTTTANQAADGMPRAEPRSGANVEQMVTGDGSVVT 106
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKE-------LLAKNKVGREDTEVP----AMDK--NF 164
K + S P + + + +G + LL GR P MD+
Sbjct: 107 KYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPMDQYARP 166
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G RIAIVVSGLG+SQTGTQRAI LP IT AFA++GNSL RWM+EA++ G E +
Sbjct: 167 SSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEIL 226
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQ+P++ FD N+ TL T+ V + + L ++ T Y GVMNY G LS+ +
Sbjct: 227 LQVPLEPFDYPANDPGPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDSTA 286
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DDG+S ++ T +A LPY ADL LD Q+D + + +KL L
Sbjct: 287 MEPVMRDIGKRGLLFLDDGTSAQSKTADVAKGTELPYAFADLQLDGQLDINAVLKKLDEL 346
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
E IAR GQAIGVA AFDES++ I++W ++ +R + +V ++ L+
Sbjct: 347 ERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPR 395
>gi|241206894|ref|YP_002977990.1| hypothetical protein Rleg_4210 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860784|gb|ACS58451.1| protein of unknown function DUF610 YibQ [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 398
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 142/409 (34%), Positives = 206/409 (50%), Gaps = 29/409 (7%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMI 58
M DL+ PL + ++ RLG + C F I G S+Y AF G E
Sbjct: 1 MGTDLHTPLGRN--RKTGRKRPGFLRLGRIAASLCLFAIGGFSLYT----AFRGDGLERT 54
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVN 117
+ AP P P + + + ++ ++G +VV
Sbjct: 55 KPPAAEQAAPPPANTPQPPTAT-------TGQTADGMPRADPRSGANVEQMVTGDGSVVT 107
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKE-------LLAKNKVGREDTEVP----AMDK--NF 164
K + P + + + +G + LL + GR P MD+
Sbjct: 108 KYSPRPRDGGGPVLVDAMQIGQDPRMAAQPNDALLEETPFGRLPIVGPDGRRPMDQYARP 167
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A G RIAIVVSGLG+SQTGTQRAI LP IT AFA++GNSL RWM+EA++ G E +
Sbjct: 168 SSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEIL 227
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
LQ+P++ FD N+ TL T+ + + L ++ T Y GVMNY G LS+ +
Sbjct: 228 LQVPLEPFDYPANDPGPETLLTTKPAARNIENLHKAMGEITNYTGVMNYLGGRFLSDPAA 287
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
E + ++ KRGLLF DDG+S ++ T +A LPY ADL LD Q+D + + +KL L
Sbjct: 288 MEPVMRDIGKRGLLFLDDGTSAQSKTAAIAKGTELPYAFADLQLDGQLDINAVLKKLDEL 347
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
E IAR GQAIGVA AFDES++ I++W ++ +R + +V ++ L+
Sbjct: 348 ERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPR 396
>gi|116254417|ref|YP_770255.1| polysaccharide deacetylase protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115259065|emb|CAK10176.1| putative polysaccharide deacetylase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 388
Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats.
Identities = 138/395 (34%), Positives = 201/395 (50%), Gaps = 29/395 (7%)
Query: 15 KRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLT 72
++ I RLG + C F I G S+Y AF G E + A P
Sbjct: 5 RKTGSRRPGILRLGRIAASLCLFAIGGFSLYT----AFRGDELERTKPPTGEQAATPPAN 60
Query: 73 IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTI 131
P + + + ++ ++G +VV K + T P +
Sbjct: 61 TPQP---------PTAGQAADGMPRADPRSGANVEQMVTGDGSVVTKYSPRTRDGGGPVL 111
Query: 132 EERLILGLSKKE-------LLAKNKVGREDTEVP----AMDK--NFCSNASGARIAIVVS 178
+ + +G + LL + GR P MD+ S A G RIAIVVS
Sbjct: 112 VDAMQIGQDPRMAAQPNEALLEETPFGRLPIVGPDGRRPMDQYARPSSGARGVRIAIVVS 171
Query: 179 GLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
GLG+SQTGTQRAI LP IT AFA++GNSL RWM+EA++ G E +LQ+P++ FD N+
Sbjct: 172 GLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAND 231
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
TL T++ + + L ++ T Y GVMNY G LS+ + E + ++ KRGLL
Sbjct: 232 PGPETLLTTKSAARNIENLHKAMGEITNYTGVMNYLGGRFLSDPAAMEPVMRDIGKRGLL 291
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
F DDG+S ++ T +A LPY ADL LD Q+D + + +KL LE IAR GQAIGVA
Sbjct: 292 FLDDGTSAQSKTAAIAKGTELPYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVA 351
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AFDES++ I++W ++ +R + +V ++ L+
Sbjct: 352 SAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPR 386
>gi|190893932|ref|YP_001980474.1| hypothetical protein RHECIAT_CH0004369 [Rhizobium etli CIAT 652]
gi|190699211|gb|ACE93296.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 388
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 140/395 (35%), Positives = 202/395 (51%), Gaps = 29/395 (7%)
Query: 15 KRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLT 72
++ + RLG + C F I G S+Y AF G E + A L+
Sbjct: 5 RKTGSRRPGVLRLGRIAASLCLFAIGGFSLYT----AFRGEGLERAKPPATEQAASQTLS 60
Query: 73 IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTI 131
P + N + + ++ I+G +VV K + S P +
Sbjct: 61 KPPTATA---------DQAANGMPRADPRSGANVEQMITGDGSVVTKYSPRPRDGSGPVL 111
Query: 132 EERLILGLSKKE-------LLAKNKVGREDTEVP----AMDK--NFCSNASGARIAIVVS 178
+ + +G + LL GR P MD+ S G RIAIVVS
Sbjct: 112 VDAMQIGQDPRMAAQPNEALLEDTAFGRLPIVGPDGRRPMDQYARPSSGVRGIRIAIVVS 171
Query: 179 GLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
GLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+
Sbjct: 172 GLGLSQTGTQRAIAELPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAND 231
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
TL ++ V + + L ++ T Y GVMNY G LS+ + E + ++ KRGLL
Sbjct: 232 PGPETLLTSKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDPAAMEPVMRDIGKRGLL 291
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
F DDG+S ++ T +A LPY ADL LD Q+D + I EKL LE IAR GQAIG+A
Sbjct: 292 FLDDGTSAQSKTATVAKGAELPYAFADLQLDGQLDINAILEKLDELERIARKNGQAIGIA 351
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AFDES++ I++W ++ +R + +V ++ L+
Sbjct: 352 SAFDESVDAIAKWSEEASMRGIEIVGVAALSNDPR 386
>gi|86359657|ref|YP_471549.1| hypothetical protein RHE_CH04079 [Rhizobium etli CFN 42]
gi|86283759|gb|ABC92822.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 377
Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 137/386 (35%), Positives = 205/386 (53%), Gaps = 27/386 (6%)
Query: 24 ISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQ 81
+ RLG + C F I G S+Y AF G E + A + P
Sbjct: 1 MLRLGRIAASLCLFAIGGFSLYT----AFRGDGLERKKPPATEQAAAPSSSTP------- 49
Query: 82 SPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILG-- 138
P++ + + + ++ ++G +VV K + S P + + + +G
Sbjct: 50 QPAQTPAGQAADGMPRAEPRSGANVEQMVTGDGSVVTKYSPRPRDGSGPVLVDAMQIGQD 109
Query: 139 -----LSKKELLAKNKVGREDTEVP----AMDK--NFCSNASGARIAIVVSGLGISQTGT 187
L + LL + GR P MD+ S A G R+AIVVSGLG+SQTGT
Sbjct: 110 PRMAALPNETLLEDSAYGRLPIVGPDGRRPMDQYARPSSGARGVRVAIVVSGLGLSQTGT 169
Query: 188 QRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247
QRAI LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL +
Sbjct: 170 QRAIAELPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTS 229
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPR 307
+ V + + L ++ T Y G++NY G LS+ + E I ++ KRGLLF DDG+S +
Sbjct: 230 KPVARNIENLHKAMGEITNYTGILNYLGGRFLSDPAAMEPIMRDIGKRGLLFLDDGTSAQ 289
Query: 308 NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV 367
+ T +A LPY ADL LD Q+D + I +KL LE +AR GQAIG+A AFDES++
Sbjct: 290 SKTADVAKGTELPYAFADLQLDGQLDVNAILKKLDELERVARKNGQAIGIASAFDESVDA 349
Query: 368 ISQWLQQEHVRDVSVVPLSCLAKLSS 393
I++W ++ +R + +V ++ L+K
Sbjct: 350 IAKWSEEASMRGIEIVGVAALSKDPR 375
>gi|218515367|ref|ZP_03512207.1| hypothetical protein Retl8_17560 [Rhizobium etli 8C-3]
Length = 367
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 138/378 (36%), Positives = 196/378 (51%), Gaps = 28/378 (7%)
Query: 31 LLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNN 89
C F IVG S+Y AF G E + A L+ P +
Sbjct: 1 ASLCLFAIVGFSLYT----AFRGEGLERAKPPATEQAASQTLSKPPTATA---------D 47
Query: 90 TVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILGLSKKE----- 143
N + + ++ I+G +VV K + S P + + + +G +
Sbjct: 48 QAANGMPRADPRSGANVEQMITGDGSVVTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPN 107
Query: 144 --LLAKNKVGREDTEVP----AMDK--NFCSNASGARIAIVVSGLGISQTGTQRAINLLP 195
LL GR P MD+ S G RIAIVVSGLG+SQTGTQRAI LP
Sbjct: 108 EALLEDTAFGRLPIVGPDGRRPMDQYARPSSGVRGIRIAIVVSGLGLSQTGTQRAIAELP 167
Query: 196 ANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLN 255
ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL ++ V + +
Sbjct: 168 EEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTSKPVARNIE 227
Query: 256 RLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAP 315
L ++ T Y GVMNY G LS+ + E + ++ KRGLLF DDG+S ++ T +A
Sbjct: 228 NLHKAMGEITNYTGVMNYLGGRFLSDPAAMEPVMRDIGKRGLLFLDDGTSAQSKTATVAK 287
Query: 316 KLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQE 375
LPY ADL LD Q+D + I EKL LE IAR GQAIG+A AFDES++ I++W ++
Sbjct: 288 GAELPYAFADLQLDGQLDINAILEKLDELERIARKNGQAIGIASAFDESVDAIAKWSEEA 347
Query: 376 HVRDVSVVPLSCLAKLSS 393
+R + +V ++ L+
Sbjct: 348 SMRGIEIVGVAALSNDPR 365
>gi|153008397|ref|YP_001369612.1| hypothetical protein Oant_1063 [Ochrobactrum anthropi ATCC 49188]
gi|151560285|gb|ABS13783.1| protein of unknown function DUF610 YibQ [Ochrobactrum anthropi ATCC
49188]
Length = 407
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 120/410 (29%), Positives = 188/410 (45%), Gaps = 27/410 (6%)
Query: 3 IDLNHPLR--KKTPKRKSFYSQIISRL--GLFLLFCTFIVGLSIYILISH---AFVGTIS 55
+DLN PL KK KR S+ GL +L + G +++ + + AF T +
Sbjct: 2 LDLNSPLGLDKKPQKRGGSRSRAFRSFMTGLVILGGLCLAGGAVFAIWQNNQAAFRKTET 61
Query: 56 EMI-------PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ P + E P+ P + S + + + G
Sbjct: 62 AAVDPTQIEAPVANKTEAKPVTGNTPPPGSALRGASGQPGPAIIKVTPDMPPGMPGAATG 121
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF---- 164
G VV + T + +++ + L ++ L+ ++ G +
Sbjct: 122 MAEGNVVVVQNTHQSG-------QDKRVAHLPEQALVEQSPTGPLPVRGADGLRPMDAYA 174
Query: 165 --CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S A GARIAIV+ GLG+SQTG+ A++ LP +TL FA GNSL RWM+ A++ G E
Sbjct: 175 AGWSGARGARIAIVIGGLGLSQTGSMEAVDKLPPEVTLGFAPQGNSLQRWMQAARQNGHE 234
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+LQ+PM+ FD TL V + L ++L R T Y GVMNY GA S
Sbjct: 235 LVLQLPMEPFDYPRINPGRNTLTVDDGASKNQAFLLWALSRMTNYAGVMNYMGARFTSET 294
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E+ + E KRGL + DDG+S R+ +A +P+ AD+ +D +R I ++L
Sbjct: 295 EAFSPVLGEIGKRGLYYLDDGTSARSQADRIAGSDAVPFAAADILIDAAQERGAILDRLD 354
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
LE AR G AIG AF +++ +++W + R + +VP+S L +
Sbjct: 355 ELERTARANGSAIGTGSAFAVTVDAVAEWANEVKKRGIEIVPVSALVRDP 404
>gi|15966920|ref|NP_387273.1| hypothetical protein SMc03784 [Sinorhizobium meliloti 1021]
gi|307301692|ref|ZP_07581451.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
BL225C]
gi|15076193|emb|CAC47746.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306903390|gb|EFN33979.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
BL225C]
Length = 400
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 141/407 (34%), Positives = 204/407 (50%), Gaps = 25/407 (6%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M+ DLN PL + + + LG L +C +G I IS S + P
Sbjct: 1 MATDLNAPLGQNRKESPARKR----DLGRVLRYCGLGLGALAVIGIS-----AWSALSPG 51
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTVVNK 118
R A +P + + +PS L + +++ ++ G TV
Sbjct: 52 HQTRSPA-MPAATEATLATEPAPSSEGQGNGPGALHRSGALSGAHVEDVLTDDGATVRKY 110
Query: 119 PTRSTSIDSLPTIE-------ERLILGLSKKELLAKNKVGREDTEVPAMDKN------FC 165
RS I+ + + L + LL GR P +
Sbjct: 111 TPRSRETGGPALIDVEATRGQDPRMAALPNESLLEDRPEGRLPVIGPDGLRPMEQYARPW 170
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A G RIAIVV GLG+SQTGTQRAI LP +TLAFA+ GNSL RWM+EA++ G E +L
Sbjct: 171 SGARGTRIAIVVGGLGLSQTGTQRAIRDLPPEVTLAFAAAGNSLQRWMQEARRDGHEILL 230
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
Q+PM+ FD + N+ + L+V+ + L L S+ + T Y GVMNY G LSN ++
Sbjct: 231 QVPMEPFDYATNDPGPHALRVSSDAGKNLAELHRSMGQITNYTGVMNYLGGRFLSNADAL 290
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
E + ++ KRGLLF DDG+S ++L+ LA +P+ ADL LD ++ R+ + +L LE
Sbjct: 291 EPVMRDLGKRGLLFLDDGTSAQSLSGTLAGAFEVPHGFADLVLDGELSRNAVLRRLDELE 350
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
IAR G AIGVA AFDES+ I++W ++ R + VV ++ L K
Sbjct: 351 RIARRNGTAIGVASAFDESVAAIAEWFEEAGGRGIEVVGVAALVKDP 397
>gi|307316285|ref|ZP_07595729.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
AK83]
gi|306898125|gb|EFN28867.1| protein of unknown function DUF610 YibQ [Sinorhizobium meliloti
AK83]
Length = 400
Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 141/407 (34%), Positives = 205/407 (50%), Gaps = 25/407 (6%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M+ DLN PL + + + LG L +C +G I IS S + P
Sbjct: 1 MATDLNAPLGQNRKESPARKR----DLGRVLRYCGLGLGALAVIGIS-----AWSALSPG 51
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTVVNK 118
R A +P + + +PS L + +++ ++ G TV
Sbjct: 52 HQTRSPA-MPAATEATLATEPAPSSEGQGNGPGALHRSGALSGAHVEDVLTDDGATVRKY 110
Query: 119 PTRSTSIDSLPTIE-------ERLILGLSKKELLAKNKVGREDTEVPAMDKN------FC 165
RS I+ + + L + LL GR P +
Sbjct: 111 TPRSRETGGPALIDVEATRGQDPRMAALPNESLLEDRPEGRLPVIGPDGLRPMEQYARPW 170
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A G RIAIVV GLG+SQTGTQRAI LP +TLAFA+ GNSL RWM+EA++ G E +L
Sbjct: 171 SGARGTRIAIVVGGLGLSQTGTQRAIRDLPPEVTLAFAAAGNSLQRWMQEARRDGHEILL 230
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
Q+PM+ FD + N+ + L+V+ + L L S+ + T Y GVMNY G LSN ++
Sbjct: 231 QVPMEPFDYATNDPGPHALRVSSDAGKNLAELHRSMGQITNYTGVMNYLGGRFLSNADAL 290
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
E + ++ KRGLLF DDG+S ++L+ LA +P+ ADL LD ++ R+ + +L+ LE
Sbjct: 291 EPVMRDLGKRGLLFLDDGTSAQSLSGTLAGAFEVPHGFADLVLDGELSRNAVLRRLEELE 350
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
IAR G AIGVA AFDES+ I++W ++ R + VV ++ L K
Sbjct: 351 RIARRNGTAIGVASAFDESVAAIAEWFEEAGGRGIEVVGVAALVKDP 397
>gi|85713722|ref|ZP_01044712.1| hypothetical protein NB311A_04259 [Nitrobacter sp. Nb-311A]
gi|85699626|gb|EAQ37493.1| hypothetical protein NB311A_04259 [Nitrobacter sp. Nb-311A]
Length = 400
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 119/410 (29%), Positives = 196/410 (47%), Gaps = 33/410 (8%)
Query: 4 DLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
DL+ PL + P+R+ + + + FLL +V L ++ +H +G E + V
Sbjct: 7 DLSMPLGQNSAPRRRLRFPFTLPQAAGFLLGSILVVFLG-FVFFNHDPLG--GEPVARVV 63
Query: 63 IREIAPIPLTIPLNIEDKQS--PSKRDNNTVCNQLKNDSSQHDGQIQNDISG---KTVVN 117
IR P++ E + P+ + ++ ++ + Q I + SG VV
Sbjct: 64 IRH-------TPVSDEKSAATRPASQQPDSAAVATRSATGQKTITIIDGSSGSRQDVVVA 116
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG------- 170
P D+ E G+ ++ LL K++ G K F + A G
Sbjct: 117 GPDS----DAADARSEAAATGIHQR-LLEKSRYGMIPVVAADGLKAFKAYAMGTEADRAK 171
Query: 171 ----ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+AIVVSGLGI T T AI LP+ +TLAF + + +++A+ + E +LQ
Sbjct: 172 AATMPVVAIVVSGLGIGTTKTIDAIMKLPSAVTLAFTPYSSDPGKLVEQARAQHHEVLLQ 231
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM+ D N+ TL T Q ++RL + L R GY G+ N+ GA ++ + +
Sbjct: 232 LPMEPHDYPDNDPGPQTLLTTLGTDQNIDRLHWQLSRFQGYVGLTNFMGARFVTAVAAMQ 291
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
I +E AKRGL + DDG++P ++ LA +P++ ADL +D +I + L LEE
Sbjct: 292 PIIREAAKRGLGYLDDGTAPTSVAGQLAKGQAMPFIKADLTIDAVPTSVEIDKTLARLEE 351
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+A+ G A+G+ A SI+ + W++ R V +VPL+ A L S S+
Sbjct: 352 LAKGRGTAVGMTSALPVSIDRVGAWIKGLESRGVMLVPLTT-AMLKSKSN 400
>gi|227823692|ref|YP_002827665.1| hypothetical protein NGR_c31780 [Sinorhizobium fredii NGR234]
gi|227342694|gb|ACP26912.1| hypothetical protein NGR_c31780 [Sinorhizobium fredii NGR234]
Length = 401
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 136/409 (33%), Positives = 196/409 (47%), Gaps = 28/409 (6%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLF--CTFIVGLSIYILISHAFVGTISEMI 58
M DLN PL + KR G L I GLS +
Sbjct: 1 MGTDLNAPLGQGLKKRPPRKRNPRRMFGYAFLGVFSLAIAGLSGWAAF-----------A 49
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTVV 116
P S++R AP ++ S L+ ++ ++ ++ G TV
Sbjct: 50 PDSLLRTEAPGTSVETPQASTERPASPTKPKVAGGSLRQSGARSGAHVEEMLTDDGATVT 109
Query: 117 NKPTRSTSIDSLPTIEERLILG-------LSKKELLAKNKVGREDTEVP----AMDK--N 163
RS D I + G L ++L+ GR P MD+
Sbjct: 110 KYTPRSRDGDGPALISAGPMRGQDPRMAALPNEDLIEDTPQGRLPIVGPDGLRPMDQYAR 169
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A G RI +VV GLG+SQTGTQRAI L +TLAFA+ GNSL RWM++A++ G E
Sbjct: 170 PWSGARGTRIGLVVGGLGLSQTGTQRAIRDLAPEVTLAFAAAGNSLQRWMQDARRDGHEI 229
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+LQIPM+ FD N + L V++ + L L S+ + T Y G+MNY G LS +
Sbjct: 230 LLQIPMEPFDYPDNAPGPHALLVSRGATKNLAELHRSMGQITNYTGIMNYLGGRFLSEAD 289
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + ++ KRGLLF DDG+S ++L+ L+ +P+ ADL LD ++ R+ I KL
Sbjct: 290 ALEPLMRDLGKRGLLFLDDGTSAQSLSGTLSGAFGVPHGFADLVLDSELSRNAILRKLDE 349
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
LE +AR G AIGVA AFDES+ I++W+++ R + V +S +
Sbjct: 350 LERVARRNGTAIGVASAFDESVATIAEWMEEAGGRGIEFVGISAVVNDP 398
>gi|239832921|ref|ZP_04681250.1| protein of unknown function DUF610 YibQ [Ochrobactrum intermedium
LMG 3301]
gi|239825188|gb|EEQ96756.1| protein of unknown function DUF610 YibQ [Ochrobactrum intermedium
LMG 3301]
Length = 406
Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 114/409 (27%), Positives = 181/409 (44%), Gaps = 26/409 (6%)
Query: 3 IDLNHPLR--KKTPKRKSFYSQIIS--RLGLFLLFCTFIVGLSIYILISHA---FVGTIS 55
+DLN PL KK KR S+ L ++ + G +++ + F T +
Sbjct: 2 LDLNSPLGLDKKPQKRGGLRSRAFRSSMKALAVVAGLCLAGGAVFAIWQTNQAGFRKTET 61
Query: 56 EMIPYSVIREIA------PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ + A P P + + + + +
Sbjct: 62 AAVEPAQPEAPAVKPVMKPATGNTPPPGSALRGVGGQPGPAIIKVTPDMPTGMPNVAAGT 121
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF----- 164
G VV + T + +++ + L + L+ ++ G +
Sbjct: 122 ADGNVVVVQNTHQSG-------QDQRVAHLPEPALVEQSSTGPLPVRGADGLRPMDAYAV 174
Query: 165 -CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A GARIA+V+ GLG+SQTG+ AI+ LP +TL FA GNSL RWM+ A++ G E
Sbjct: 175 GWSGARGARIALVIGGLGLSQTGSMEAIDKLPQEVTLGFAPQGNSLQRWMQAARQNGHEL 234
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+LQ+PM+ FD TL V ++ L ++L R T Y GVMNY GA S E
Sbjct: 235 VLQLPMEPFDYPRVNPGRNTLTVGDGAKKNEASLLWALSRMTNYAGVMNYMGARFTSETE 294
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E +RGL + DDG+S R+ +A +P+ AD+ +D +R I ++L
Sbjct: 295 VFSPVLGEIGRRGLYYLDDGTSARSEADRIASSDAVPFAAADVLIDAAQERGAILDRLDE 354
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
LE IAR G AIG AF +++ ++ W + R + +VP+S L +
Sbjct: 355 LERIARANGSAIGTGSAFAVTVDAVAAWANEVKKRGIEIVPVSALVRDP 403
>gi|75674648|ref|YP_317069.1| hypothetical protein Nwi_0450 [Nitrobacter winogradskyi Nb-255]
gi|74419518|gb|ABA03717.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255]
Length = 400
Score = 318 bits (816), Expect = 8e-85, Method: Composition-based stats.
Identities = 116/408 (28%), Positives = 190/408 (46%), Gaps = 29/408 (7%)
Query: 4 DLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
DL+ PL + P+R+ + + LL +V L ++ +H +G E
Sbjct: 7 DLSTPLGQNPAPRRRLRLPFSLPQATGLLLGSILVVFLG-FVFFNHDPLG--GEPKARVA 63
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG---KTVVNKP 119
IR+ AP+ P I P + ++ + + Q I + SG VV+ P
Sbjct: 64 IRQ-APVSDDKPTAIR----PPPQQPDSAAVTAPSANGQKTITIIDGSSGSRQDVVVSGP 118
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG--------- 170
D+ + ++G+ ++ LL K++ G K F + A+G
Sbjct: 119 GP----DAADAGSAKAVVGVDQR-LLEKSRHGMIPVAAADGLKPFKAYAAGTEADRAKAA 173
Query: 171 --ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+AIVV GLG+ T T AI LP +TLAF G+ R + +A+ + E +LQ+P
Sbjct: 174 KMPVVAIVVGGLGVGATKTTDAIMKLPPAVTLAFTPYGSDPGRLVAQARAQRHEVLLQVP 233
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ +D N+ TL T +Q ++RL + L R GY G+ N+ GA ++ +
Sbjct: 234 MEPYDYPDNDPGPQTLLTTLGAEQNIDRLHWQLSRFQGYVGLTNFMGARFVAAAAVMQPF 293
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
E A+RGL + DDG++P ++ LA +P+ ADL +D +I + L LE++A
Sbjct: 294 MHEAARRGLGYLDDGAAPLSVAGRLAEGQAMPFARADLIVDAVPTSVEIDKALARLEDLA 353
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AIG+ A S++ I W++ R V +VPL+ A L S S+
Sbjct: 354 MKRGVAIGMTSALPVSVDRIGVWIKSLESRGVMLVPLTT-AMLKSKST 400
>gi|222087889|ref|YP_002546427.1| hypothetical protein Arad_4893 [Agrobacterium radiobacter K84]
gi|221725337|gb|ACM28493.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 400
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 138/404 (34%), Positives = 202/404 (50%), Gaps = 30/404 (7%)
Query: 1 MSIDLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIP 59
M DL+ PL + + P RK L F L I S+Y A + + P
Sbjct: 1 MGTDLHAPLGQNRGPDRKRRRPPFGRILAGFCL--IAIASFSLY----SALLRDTLQKTP 54
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNK 118
V E A P + + L Q ++ +VV
Sbjct: 55 PPV--ETAEKTAPTPPADTRPAAADQP-------SLTEVDPQSGANTSRIVTSDGSVVTM 105
Query: 119 PTRSTSIDSLPTI-------EERLILGLSKKELLAKNKVGREDTEVPAMDK------NFC 165
+ + S P + ++ + + LL + G+ P+ +
Sbjct: 106 FSPTARDGSGPVLINANQIGQDPRMAATPNESLLEDSPFGKLPITAPSGLRSMDQYARPW 165
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S A G R+AIVVSGLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA++ G E ++
Sbjct: 166 SGARGTRVAIVVSGLGLSQTGTQRAIEKLPEEITLAFAASGNSLQRWMQEARRGGHEILI 225
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
Q+P + FD N TL +Q+ + ++ L ++ + T Y GVMNY G LSN ++
Sbjct: 226 QVPFEPFDYPSNNPGPETLLTSQSAAKNIDNLHKAMGKITNYTGVMNYLGGRFLSNTDAL 285
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ KRGLLF DDGSS ++ + +A L P+ AD+ LD ++ +D I +KL LE
Sbjct: 286 QPVMRDIGKRGLLFLDDGSSAQSKSGTVAKALETPHAFADMQLDGELQQDAILKKLDELE 345
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
IAR G AIGVA AFDESI+ IS+W Q+ +R + +V +S LA
Sbjct: 346 RIARRNGTAIGVASAFDESIDAISKWSQEAAMRGIEIVAVSALA 389
>gi|315121752|ref|YP_004062241.1| hypothetical protein CKC_00010 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495154|gb|ADR51753.1| hypothetical protein CKC_00010 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 354
Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats.
Identities = 223/364 (61%), Positives = 262/364 (71%), Gaps = 25/364 (6%)
Query: 37 IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK 96
I GLSIYIL+S+A +GT+SE+ PYS +RE + +PL +P+ NT + +
Sbjct: 3 IFGLSIYILMSNALIGTVSEIGPYSFVREA----VLVPLKNSSVANPASSPVNTAPSPTQ 58
Query: 97 --NDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK----- 149
N + D V N+ RST +DSLPTIE RLI EL+ K K
Sbjct: 59 VVNSTDHKDA---------LVANESKRSTLLDSLPTIEGRLI---PVSELMEKTKPHLIS 106
Query: 150 -VGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNS 208
+ A C N SGARIAIVVS LGISQTGTQRAINLLP N+TLAFASNGNS
Sbjct: 107 VESENKSVSSAYSTRSCPNVSGARIAIVVSALGISQTGTQRAINLLPQNVTLAFASNGNS 166
Query: 209 LDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF 268
L+RWM+ AK+KGQE +LQIPMQ+F+E N+ D YTLK+T++ QQLL+RLRYSLRRG GYF
Sbjct: 167 LNRWMQAAKQKGQEVMLQIPMQSFNELNND-DVYTLKITKSSQQLLSRLRYSLRRGKGYF 225
Query: 269 GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYL 328
GVMNYRGAM LSNK+S E IFKEFA GLLFFDDGSS RNLTRV+AP++NLPY VADLYL
Sbjct: 226 GVMNYRGAMFLSNKDSVETIFKEFAALGLLFFDDGSSSRNLTRVVAPQINLPYAVADLYL 285
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
DD VDRD IREKLK L +IAR TGQAIGVA AFDES+E IS+WLQ+EH DVS+VPLSCL
Sbjct: 286 DDVVDRDSIREKLKKLSDIARVTGQAIGVASAFDESVEEISKWLQEEHASDVSIVPLSCL 345
Query: 389 AKLS 392
KL+
Sbjct: 346 VKLA 349
>gi|92116147|ref|YP_575876.1| protein of unknown function DUF610, YibQ [Nitrobacter hamburgensis
X14]
gi|91799041|gb|ABE61416.1| protein of unknown function DUF610, YibQ [Nitrobacter hamburgensis
X14]
Length = 401
Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats.
Identities = 113/399 (28%), Positives = 184/399 (46%), Gaps = 27/399 (6%)
Query: 4 DLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
DL+ PL + PKR+ + + LL +V + ++L +H +G E
Sbjct: 7 DLSTPLGQNPAPKRRFRLPFTLPQAAAVLLGSILVVFVG-FVLFNHDPLG--GEPAARIA 63
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG---KTVVNKP 119
IR+ P + P+ + + + ++ + I + SG VV
Sbjct: 64 IRQTV-----APEDKSAAVPPASQPTSAAAVTAQPEAGRKTITIIDGSSGSRQDVVVAGA 118
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG--------- 170
T+ + + G+ + LL K++ G K F + A+G
Sbjct: 119 DSDTAGGGAAPV---TMAGIDPR-LLEKSRYGMIPAVAADGLKPFKAYATGTDADRAKAA 174
Query: 171 --ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
IAIVV GLG+ T AI LP +TLAF G+ + +++A+ + E +LQ+P
Sbjct: 175 TMPVIAIVVGGLGVGAAKTADAIMKLPPAVTLAFTPYGSDPGKLVEQARAQRHEILLQVP 234
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ +D N+ TL T +Q ++RL + L R GY G+ N+ GA ++ + I
Sbjct: 235 MEPYDYPDNDPGPQTLLTTLGTEQNIDRLHWHLSRFQGYVGLANFMGARFVAAATVMQPI 294
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+E AKRGL + DDGS+PR++ LA +P+ ADL +D +I + L LE++A
Sbjct: 295 IREAAKRGLGYLDDGSTPRSVAGQLAEGQAMPFAKADLTIDAVPTSVEIDKALARLEDLA 354
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+ G AIG+A A S+E I W + R V +VPL+
Sbjct: 355 KERGAAIGMASALPVSVERIGAWAKGLESRGVMLVPLTT 393
>gi|150398212|ref|YP_001328679.1| hypothetical protein Smed_3017 [Sinorhizobium medicae WSM419]
gi|150029727|gb|ABR61844.1| protein of unknown function DUF610 YibQ [Sinorhizobium medicae
WSM419]
Length = 399
Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats.
Identities = 139/409 (33%), Positives = 207/409 (50%), Gaps = 30/409 (7%)
Query: 1 MSIDLNHPLRKKTPKRKSFYS--QIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMI 58
M+ DLN PL + +R++ + + R L I+GLS + S +
Sbjct: 1 MATDLNAPLGQNRKERRAHKRDLRRLLRYSGLSLAAVAIMGLSAW-----------SALF 49
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTVV 116
P + R A + + ++ S T + LK + ++ ++ G TV
Sbjct: 50 PVPLTRSPAAPTVAEANPVA--EASSSGAPVTSPSPLKRSGALSGADVEEVLTDHGATVR 107
Query: 117 NKPTRSTSIDSLPTIE-------ERLILGLSKKELLAKNKVGREDTEVPAMDKN------ 163
R I+ + + L + LL GR P +
Sbjct: 108 KYTPRPRETGGPAFIDVGSTRGQDPRMAALPNESLLEDRPEGRLPIIGPDGLRPMEQYAR 167
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A G RIAIVV GLG+SQTGTQRAI LP +TLAFA+ GNSL RWM+EA++ G E
Sbjct: 168 PWSGARGTRIAIVVGGLGLSQTGTQRAIRDLPPEVTLAFAAAGNSLQRWMQEARRDGHEI 227
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+LQ+PM+ FD N+ L+V+ ++ L +L S+ + T Y GVMNY G LSN +
Sbjct: 228 LLQVPMEPFDAPDNDPGPPALRVSADARENLAQLHRSMGQITNYTGVMNYLGGRFLSNAD 287
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + ++ KRGLLF DDG+S ++L+ LA ++P+ AD+ LD ++ R I +L
Sbjct: 288 ALEPVMRDLGKRGLLFLDDGTSAQSLSGTLAGAFDVPHGFADVVLDSELSRSTILRRLDD 347
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
LE IAR G AIGVA AFDES+ I++W+++ R + VV ++ L K
Sbjct: 348 LERIARKGGTAIGVASAFDESVTSIAEWIEEAGGRGIEVVGVAALVKDP 396
>gi|220924600|ref|YP_002499902.1| hypothetical protein Mnod_4734 [Methylobacterium nodulans ORS 2060]
gi|219949207|gb|ACL59599.1| protein of unknown function DUF610 YibQ [Methylobacterium nodulans
ORS 2060]
Length = 404
Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats.
Identities = 112/395 (28%), Positives = 172/395 (43%), Gaps = 12/395 (3%)
Query: 5 LNHPL--RKKTPKRKSFYSQIISRLGLFLLFCTFIVG-LSIYILISHAFVGTISEMIPYS 61
L+ PL R + P R + + I + + +VG L+ I + +G +
Sbjct: 16 LSRPLGIRNEAPSRLARWRAAIPVRPILAAGSSVLVGALACLIAFTEDPLGGEPHAVVTI 75
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
+RE + E +P+ D + +++ S + + VV +
Sbjct: 76 TLREP------VAPAPEPTLAPAAPDGSRSAGEVERASGVAVTRPEGAAVPDAVVIRVPD 129
Query: 122 STSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC---SNASGARIAIVVS 178
+ P + RL+ L G ++ A + A RIA+VV+
Sbjct: 130 PAELSLAPAPDPRLVEKGRYGVLPRIGPDGARALDIYARPEATSLRSGAAPAGRIALVVT 189
Query: 179 GLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
GLGI QT TQ A+ LP +TLAFA G+ + + A++ G E ++Q PM+ FD N+
Sbjct: 190 GLGIGQTVTQEAVTRLPPAVTLAFAPYGSDIGKAATRAREAGHEVLVQAPMEPFDYPDND 249
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
TL + RL + L R G GV+NY GA L S E + +E RGL
Sbjct: 250 PGPQTLLAGAKPAENTGRLAFVLARVPGAIGVVNYMGARLTGEAASLEPVLREIGARGLG 309
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
F DDGSSPR+L + + P AD +D Q D I +L LEE AR G A+G A
Sbjct: 310 FLDDGSSPRSLALEVGRRTRTPVARADAVVDAQPLPDAIDRELARLEETARRKGFALGTA 369
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+A ++E I +W + R + +VP S +
Sbjct: 370 MALPLTVERILRWSRDLEARGILLVPASHALRTRR 404
>gi|222150173|ref|YP_002551130.1| hypothetical protein Avi_4301 [Agrobacterium vitis S4]
gi|221737155|gb|ACM38118.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 398
Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats.
Identities = 131/404 (32%), Positives = 194/404 (48%), Gaps = 26/404 (6%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
+S DL+ L + KR++ +I L ++GLS+Y ++
Sbjct: 3 LSADLHAALGQNRKKRRTGGPKISPFKALTASSSVALLGLSVYTTLTP----LPLRNPLP 58
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKP 119
+ PS+ ++ +VV K
Sbjct: 59 LATTPPVAAAVPAEEPAAKAPGPSRSMEARAPT--------SGATVERSTLPDGSVVTKY 110
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE---VPAMDK----------NFCS 166
+ ++ S P + +G + N E+T +P + S
Sbjct: 111 SPASRDGSGPALVTTPHVGQDPRVAATPNPDLLENTPEGQIPVTGRDGLRPVEQYARPWS 170
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A G R+AIVVSGLG+SQTGTQRAI LP +TLAFA++GNSL RWM+EA++ G E +LQ
Sbjct: 171 GAHGTRVAIVVSGLGLSQTGTQRAIKHLPEQVTLAFAASGNSLSRWMQEARRGGHEILLQ 230
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P++ N+ TL+V + L L ++ T Y G+MNY G LS+ + +
Sbjct: 231 VPLEPVGYPANDPGRGTLQVGRAATDNLRDLHRAMASMTNYTGLMNYMGGRFLSDSGAMD 290
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ ++ A RGLLF DDGSS R+LT A +N+P+ VADL LDDQ+ I ++L LE
Sbjct: 291 PVMRDIAARGLLFLDDGSSARSLTATFAKAMNMPFSVADLQLDDQIQEQAILKRLDELER 350
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IAR G AIGVA AFDES+ I++W + R + +V +S LA
Sbjct: 351 IARRNGSAIGVASAFDESVNAIAKWAEGAKARGIEIVGVSALAM 394
>gi|316931861|ref|YP_004106843.1| hypothetical protein Rpdx1_0469 [Rhodopseudomonas palustris DX-1]
gi|315599575|gb|ADU42110.1| protein of unknown function DUF610 YibQ [Rhodopseudomonas palustris
DX-1]
Length = 412
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 118/417 (28%), Positives = 185/417 (44%), Gaps = 26/417 (6%)
Query: 1 MSID-LNHPLRKKTPKRKSFYSQIIS---RLGLFLLFCTFIVGLSIYILISHAFVGTIS- 55
M+ D L+ PL +K + + + + L F++ + + SH +G
Sbjct: 1 MAADELSTPLGQKRSRWQRLRHYRLPFNATQAIATLLGVFVLAFLGFAIFSHDPLGGEPV 60
Query: 56 ---EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
E+ P + + A + + + +P+ + Q Q I + G
Sbjct: 61 VRLEIPPAADAPKQAAAAPAKAPDGKAENAPAAGPDQHGGKQA--APGQKTITIIDGSKG 118
Query: 113 ---KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV----PAMDKNFC 165
VV T S P + +LL +++ G P
Sbjct: 119 TRQDVVVGADTADKS--EPPGGASAVAADGINPKLLEQSRYGMIPVMAGGLKPFNAYAMA 176
Query: 166 SNASGAR------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
++A A+ + IVV GLGI T A+ LPA +TLAF G+ + EA+ K
Sbjct: 177 TDAERAKAERMPTVTIVVGGLGIGAARTNDAVMKLPAPVTLAFTPYGSDPGKLATEARAK 236
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
E ILQIPM+ FD N+ TL + +Q L+RL + L R GY G+ N+ GA +
Sbjct: 237 RHEIILQIPMEPFDYPDNDPGPQTLLTSSAPEQNLDRLNWHLSRIQGYVGLSNFMGARFV 296
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+ + + + I ++ AKRGL + DDG++PR++ LA L +P+ ADL +D I +
Sbjct: 297 ATEPAMQAIIRDAAKRGLGYLDDGTAPRSVAGTLANSLAIPFARADLTIDQVPAGADIDK 356
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
L LE IA+ G AIG+A A +IE I W + R + +VPL+ A L S SS
Sbjct: 357 ALTRLESIAKERGSAIGMASALPVTIERIVNWSKSLESRGIVLVPLTT-AMLKSKSS 412
>gi|86747385|ref|YP_483881.1| hypothetical protein RPB_0259 [Rhodopseudomonas palustris HaA2]
gi|86570413|gb|ABD04970.1| Protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris HaA2]
Length = 405
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 116/409 (28%), Positives = 186/409 (45%), Gaps = 17/409 (4%)
Query: 1 MSID-LNHPLRKKTPK-RKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMI 58
MS D L+ PL +K + R+ +++ + L F++ + L + +G E I
Sbjct: 1 MSADELSTPLGQKRSRLRRFRLPFTVTQA-IATLLGLFLLAFVGFALFNDDPLG--GEPI 57
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRD-NNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
+ ++ P DK + +K + + Q I + G
Sbjct: 58 AHITLKPPTPDEAKEAAAAADKANGAKTEKTERAAAKDAALPGQKTITIIDGSKGTRQDV 117
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV----PAMDKNFCSNASGAR- 172
+ + E + G LL +++ G P ++A A+
Sbjct: 118 VVSAGNDDKADTPPAEPAMAGGINPRLLEQSRYGMIPVMAGALKPFSAYAMSTDAERAKA 177
Query: 173 -----IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
IAIVV+GLG+ T A+ LP +TLAF G + +++A+ K E +LQI
Sbjct: 178 DRMPTIAIVVTGLGVGAARTNDAVIKLPRAVTLAFTPYGADPGKLVEQARAKQHEVLLQI 237
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ FD N+ TL + +Q L+RL + L R GY G+ N+ GA ++ + + +
Sbjct: 238 PMEPFDYPDNDPGPQTLLTSGAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATEAAMQP 297
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I +E AKRGL + DDGS+PR++ LA L +P+ ADL +D +I + L LE +
Sbjct: 298 IIREAAKRGLGYLDDGSAPRSVAPALAKSLAMPFARADLAIDSVPTGGEIDKALARLEGL 357
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
A+ G AIG A A SIE I W + R + +VPL+ A L S S+
Sbjct: 358 AKERGLAIGTASALPLSIERIVSWSKSLESRGILLVPLTT-AMLKSKST 405
>gi|39933247|ref|NP_945523.1| hypothetical protein RPA0170 [Rhodopseudomonas palustris CGA009]
gi|39652872|emb|CAE25614.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 412
Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats.
Identities = 109/414 (26%), Positives = 178/414 (42%), Gaps = 20/414 (4%)
Query: 1 MSID-LNHPLRKKTPKRKSFYSQIIS---RLGLFLLFCTFIVGLSIYILISHAFVGTIS- 55
M+ D L+ PL +K + + + G+ L F++ + L + G
Sbjct: 1 MAADELSTPLGQKRNRWQRLRHYRLPFNATQGIAALLGLFVLTFLGFALFGNDPFGGEPV 60
Query: 56 ---EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
E+ + A + + + + + Q I + G
Sbjct: 61 VRVEIKAGPEEAKQAAAEAGKDQGGKPENAAAAGAEKKDAEPKDAAAGQKTITIIDGSKG 120
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV----PAMDKNFCSNA 168
+ + P G++ K LL +++ G P ++A
Sbjct: 121 TRQDVVVGTDSPDKAEPPAGPTTSDGINPK-LLEQSRYGMIPVMAGGLKPFSAYAMTTDA 179
Query: 169 SGAR------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
A+ + IVV GLGI T A+ LPA + LAF G+ + EA+ K E
Sbjct: 180 DRAKAERMPTVTIVVGGLGIGAARTNDAVMKLPAAVALAFTPYGSDPGKLATEARAKRHE 239
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
ILQIPM+ FD N+ TL + +Q L+RL + L R GY G+ N+ GA ++ +
Sbjct: 240 VILQIPMEPFDYPDNDPGPQTLLTSSAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATE 299
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + ++ AKRGL + DDG++PR++ LA L +P++ ADL +D I + L
Sbjct: 300 PAMQAVIRDAAKRGLGYLDDGTAPRSVAGTLAKSLAIPFVRADLTIDQVPAGADIDKSLA 359
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
LE IA+ G A+G+A A +IE I W + R + + PL+ A L S SS
Sbjct: 360 RLESIAKERGSAVGMASALPVTIERIVNWSKSLESRGILLAPLTT-AMLKSKSS 412
>gi|299135455|ref|ZP_07028645.1| protein of unknown function DUF610 YibQ [Afipia sp. 1NLS2]
gi|298589863|gb|EFI50068.1| protein of unknown function DUF610 YibQ [Afipia sp. 1NLS2]
Length = 392
Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats.
Identities = 109/404 (26%), Positives = 176/404 (43%), Gaps = 24/404 (5%)
Query: 1 MSIDLNHPLRKKTPK-RKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIP 59
M+ DL+ PL + TP+ R+ + + + F++ + + +G ++
Sbjct: 1 MTDDLSAPLGQTTPRKRRFRLPFTAPQA-IATVCGLFLLAFLGFAIFGRDPMGGEPVVV- 58
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
P +P S + S Q I + SG+ K
Sbjct: 59 ------AKYDPAKLPGADH-----SAIPSAAPVAPAAAPSGQKTVTIIDGSSGERREMKV 107
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAK-------NKVGREDTEVPA--MDKNFCSNASG 170
+ L ++ G++++ L G + V A D A+
Sbjct: 108 GDDGTPAGLDADTPAMMSGINQRLLENSRYGMVPIAADGLKPWRVYASGTDLQRARAATT 167
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
I+IV+ GLG+ T AI LPA +TLAF G+ + ++ A+ + E +LQ+PM+
Sbjct: 168 PTISIVIGGLGVGAAKTNDAIVKLPAAVTLAFTPYGSDPGKLVERARARKHEVLLQLPME 227
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+D N+ TL T +Q ++RL + + R GY G+ N+ G+ L + + I +
Sbjct: 228 PYDYPDNDPGPQTLLATAGPEQNVDRLMWLMSRFQGYVGLTNFMGSRFLVTDSAMQPIIQ 287
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ AKRGL + DDGS PR+L LA +P AD LD +I + L LE +AR
Sbjct: 288 QAAKRGLAWLDDGSVPRSLAGQLAGAQGVPTATADAVLDQVPTAAEIDKSLMKLETLARE 347
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL-SCLAKLSS 393
G A+G+A A SIE I W Q+ R + +VPL + L K S
Sbjct: 348 RGSAVGMASALPISIERIGAWAQRLESRGILLVPLTTTLMKSKS 391
>gi|192288598|ref|YP_001989203.1| hypothetical protein Rpal_0165 [Rhodopseudomonas palustris TIE-1]
gi|192282347|gb|ACE98727.1| protein of unknown function DUF610 YibQ [Rhodopseudomonas palustris
TIE-1]
Length = 412
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 110/414 (26%), Positives = 178/414 (42%), Gaps = 20/414 (4%)
Query: 1 MSID-LNHPLRKKTPKRKSFYSQIIS---RLGLFLLFCTFIVGLSIYILISHAFVGTIS- 55
M+ D L+ PL +K + + + G+ L F++ + L + G
Sbjct: 1 MAADELSTPLGQKRNRWQRLRHYRLPFNATQGIAALLGLFVLTFLGFALFGNDPFGGEPV 60
Query: 56 ---EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
E+ + A + + + + + + Q I + G
Sbjct: 61 VRVEIKASPDEAKQAAAEAGKDQGGKPENAAAAGAEKKDAEPKEAAAGQKTITIIDGSKG 120
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV----PAMDKNFCSNA 168
+ + P G++ K LL +++ G P ++A
Sbjct: 121 TRQDVVVGTDSPDKAEPPAGPTTSDGINPK-LLEQSRYGMIPVMAGGLKPFSAYAMTTDA 179
Query: 169 SGAR------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
A+ + IVV GLGI T A+ LPA + LAF G+ + EA+ K E
Sbjct: 180 DRAKAERMPTVTIVVGGLGIGAARTNDAVMKLPAAVALAFTPYGSDPGKLATEARAKRHE 239
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
ILQIPM+ FD N+ TL + +Q L+RL + L R GY G+ N+ GA ++ +
Sbjct: 240 VILQIPMEPFDYPDNDPGPQTLLTSSAPEQNLDRLNWHLSRIQGYVGLSNFMGARFVATE 299
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + I ++ AKRGL + DDG++PR++ LA L +P+ ADL +D I + L
Sbjct: 300 PAMQAIIRDAAKRGLGYLDDGTAPRSVAGTLAKSLAIPFARADLTIDQVPAGADIDKSLA 359
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
LE IA+ G A+G+A A +IE I W + R + + PL+ A L S SS
Sbjct: 360 RLESIAKERGSAVGMASALPVTIERIVNWSKSLESRGILLAPLTT-AMLKSKSS 412
>gi|27375546|ref|NP_767075.1| hypothetical protein blr0435 [Bradyrhizobium japonicum USDA 110]
gi|27348683|dbj|BAC45700.1| blr0435 [Bradyrhizobium japonicum USDA 110]
Length = 407
Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats.
Identities = 116/405 (28%), Positives = 181/405 (44%), Gaps = 16/405 (3%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRL-GLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
DL+ PL + +RK + + L +L F+V + + + + +G E +
Sbjct: 7 DLSAPLGQDKLRRKRRLRLPFTAMQALAMLLGLFLVTFAGFAIFNKDPLG--GEPMTRIA 64
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS-QHDGQIQNDISGKT--VVNKP 119
IRE + + S + + T + Q + + +G VV
Sbjct: 65 IREPKATDEKPAASGHGQDSKQESKHETREAPKQAAPGEQKTVTMIDGSTGARHDVVIGA 124
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGR--------EDTEVPAMDKNFCSNASGA 171
+ + ++ G+ K LL K++ G + V A D + A
Sbjct: 125 GEADDKGEAASAPPPVMAGIDPK-LLEKSRYGMIPVVADGSKPFNVYAADADRAKAAKMP 183
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+AIV+ GLG+ T AI LPA +TLAF G+ + + A+ + E LQIPM+
Sbjct: 184 VVAIVIGGLGVGAAKTTDAIMKLPAAVTLAFTPYGSDPGKIAERARTQRHEIFLQIPMEP 243
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+D N+ TL + + Q ++RL + L R GY G+ N+ GA ++ + + I +E
Sbjct: 244 YDFPDNDPGPQTLLTSLSADQNMDRLYWHLSRMQGYAGITNFMGARFVATDAAMQPIIRE 303
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
AKRGL FFDDGSSPR++ A +P+ D+ +D +I L LE AR
Sbjct: 304 AAKRGLGFFDDGSSPRSIAPQAAASQAMPFGKGDIAIDVVPTPAEIDRALNKLESAARER 363
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AIG A A SIE I W + R + +VPL+ A L S SS
Sbjct: 364 GTAIGTASALPVSIERIGAWTKTLGDRGILLVPLTT-AMLKSKSS 407
>gi|90421691|ref|YP_530061.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB18]
gi|90103705|gb|ABD85742.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB18]
Length = 412
Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats.
Identities = 116/410 (28%), Positives = 180/410 (43%), Gaps = 19/410 (4%)
Query: 1 MSID-LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTIS---- 55
M+ D L+ PL +K P+++ F + L ++ + + L + G
Sbjct: 1 MTTDELSAPLGQKRPRKRKFRLPFSGTQAIATLLGLVLLAFAGFALFNDNPQGGEPMVRM 60
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
+ P + A E + ++ + Q I + SG
Sbjct: 61 AIRPQPAADKPAAPETDKAAKAESHDGAAGGSHDKAAHV--EVPGQKTVTIIDGSSGARQ 118
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR----EDTEVPAMDKNFCSNASGA 171
+ + + +G+ +K LL K++ G D P A A
Sbjct: 119 QVVVPGGGGDTAASDVAPAITVGIDQK-LLEKSRYGMIPMVADGVKPFNAYATAGEADRA 177
Query: 172 R------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ IAIVV GLG+ T AI LPA +TLAF G+ + ++ A+ + E +L
Sbjct: 178 KAARMPSIAIVVGGLGVGAAKTNDAIMKLPAAVTLAFTPYGSDPAKLVERARAQRHEVLL 237
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
QIPM+ FD N+ TL T +Q ++RL + L R GY G+ N+ G ++ + +
Sbjct: 238 QIPMEPFDYPDNDPGPQTLLTTLPSEQNIDRLYWHLSRFQGYIGITNFMGGRFVTTEPAL 297
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ I +E AKRGL + DDG SPR + +LA LP+ ADL +D +I L LE
Sbjct: 298 QPIVREAAKRGLGYLDDGQSPRGVAALLATTQTLPFGKADLSIDVVPTALEIDRALYRLE 357
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+AR G AIG+A A SIE I+ W + R + +VPL+ A L S S
Sbjct: 358 SLARDNGNAIGMASALPISIERIATWSRSLEGRGLLLVPLTT-AMLKSKS 406
>gi|15890022|ref|NP_355703.1| hypothetical protein Atu2773 [Agrobacterium tumefaciens str. C58]
gi|15157997|gb|AAK88488.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 399
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 132/406 (32%), Positives = 195/406 (48%), Gaps = 30/406 (7%)
Query: 1 MSIDLNHPL-RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIP 59
MS DL PL ++ + L L +L I GLSIY +S
Sbjct: 1 MSSDLRKPLLGRQKKSAGINRRFSVIML-LSVLAVLSIGGLSIYTALS------------ 47
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCN--QLKNDSSQHDGQIQNDISGK-TVV 116
+++ A P P E ++ D + L+ S + I VV
Sbjct: 48 PGNLQKTAAGPDGQPQLAEKAPEKAQVDVPAAGDTAGLQPQSGRSGANINRATLPDGNVV 107
Query: 117 NKPTRSTSIDSLPTI-------EERLILGLSKKELLAKNKVGREDTEVPAMDKN------ 163
+ + P + ++ + +ELL + G+ +
Sbjct: 108 SVYSPRPRDSDGPVLMSGQTYGQDPRMATRPNEELLEETAFGQLPVVGADGLRPMEQYAR 167
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A G R+AIVV GLG+SQTG+Q+AI LP +TL FA++GNSL RWM++A+++G E
Sbjct: 168 PWSGARGTRVAIVVGGLGLSQTGSQKAIRDLPPEVTLGFAASGNSLQRWMQDARREGHEI 227
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+LQIP++ F TL + ++RL S+ + T Y GVMNY G L+ +
Sbjct: 228 LLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQS 287
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + ++ KRGLLF DDGSS ++L+ +A ++ P AD+ LD +V I KL
Sbjct: 288 ALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDD 347
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
LE IAR GQAIGVA AFDESI IS+W ++ R + +V +S L
Sbjct: 348 LERIARRNGQAIGVASAFDESIAAISKWSREAGGRGIEIVGVSALV 393
>gi|193084246|gb|ACF09908.1| uncharacterized protein [uncultured marine group III euryarchaeote
KM3-28-E8]
Length = 394
Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats.
Identities = 86/397 (21%), Positives = 148/397 (37%), Gaps = 19/397 (4%)
Query: 8 PLRKKTPKRKSFYSQIISRLGLFLLFCTFIV--GLSIYILISHAFVGTISEMIPYSVIR- 64
P R S + L F +V + + + A +G +
Sbjct: 3 PFMSSDDIRVSRTYGGMPMLLASRRFRLLVVTAFVVLVGIGLGAQIGNWLATAELPSAQI 62
Query: 65 --EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
E+ +P + + + N N + + + +
Sbjct: 63 ALEVREMPYQVVTRTYRRLAREYELTVPAKNLEPNFEPIAVARSWDF----VAEVETRLN 118
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK------NFCSNASGARIAIV 176
+ + +E L LG+ K L N + M + IAIV
Sbjct: 119 QGVGAPRHEQEDLELGMQKSTL--PNSAPPPPLRLGGMPQWMVNAVPPPITRGRPMIAIV 176
Query: 177 VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESY 236
+ LG+S +R I LP ITLAF +L + KE + G E I+ + M+ D
Sbjct: 177 MDDLGLSPKRVRRTIA-LPGPITLAFLPYARNLRKLAKEGRAAGHELIIHMNMEPKDH-D 234
Query: 237 NEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRG 296
+ L + ++ RL ++L + GY GV N+ G+ EV+ + +RG
Sbjct: 235 IDPGPNALLTSMDPMEIRERLLWALNQFDGYIGVSNHMGSRFTEWPNGMEVVIRALKRRG 294
Query: 297 LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIG 356
LL+FD +S +++ LA Y D++LD + + +L E+IAR G AI
Sbjct: 295 LLYFDSLTSTKSVGLTLARAHGTAYARRDVFLDHERFAKAVAWQLAQTEQIARRRGYAIA 354
Query: 357 VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ +D + +V+ WL R +VPLS + +
Sbjct: 355 IGHPYDVTFDVLENWLPDAEARGFVMVPLSTIVRRQR 391
>gi|307942948|ref|ZP_07658293.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307773744|gb|EFO32960.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 385
Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 102/385 (26%), Positives = 171/385 (44%), Gaps = 17/385 (4%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVI 63
DL+ PL +R + +G+ +F T + I+I I +G +
Sbjct: 13 DLSAPLG-LGKRRFLRLPFGLIGIGIVSVFATVAL---IWIGIVDDPLGGEPTAVIPLST 68
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ + I + + +++ Q + N
Sbjct: 69 ADGLASRDIEVVEIRPAMDGELGPSLRKNGGDQRLGPRYELMDQEAL------NAAAGGL 122
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF-CSNASGARIAIVVSGLGI 182
P + ER G + + + A + F AS +IAIV++GLG+
Sbjct: 123 PNYPDPRVSERTGFGFLPRIGSEGVR------PLDAYARPFETEFASTPKIAIVITGLGL 176
Query: 183 SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
S+ GTQ ++ LPA+ TL + G +LDRW++ A+ KG E +L +PM+ FD N+ +
Sbjct: 177 SEAGTQNVLDQLPADTTLGLSPYGANLDRWIQGARTKGHEIVLSLPMEPFDFPDNDPGPH 236
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
TL V+ T +L RL + L R T Y GVM GA S + + +++ ++ RGL+F D+
Sbjct: 237 TLLVSLTQSELTERLTWLLTRITNYVGVMPEMGARYTSTRPTLQLLMEKLRDRGLMFVDN 296
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
G+S R++ +A + P+ D+ LD D+I KL LE IAR G A+ A
Sbjct: 297 GTSSRSVADEIAEETTTPFSGVDVVLDAVPREDEINAKLLQLEGIARARGVAVATGSALP 356
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSC 387
++ I +W + R + +VP+S
Sbjct: 357 VTVRQIEKWARDLEERGLLLVPVSA 381
>gi|163761381|ref|ZP_02168455.1| hypothetical protein HPDFL43_17685 [Hoeflea phototrophica DFL-43]
gi|162281376|gb|EDQ31673.1| hypothetical protein HPDFL43_17685 [Hoeflea phototrophica DFL-43]
Length = 418
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 123/417 (29%), Positives = 196/417 (47%), Gaps = 36/417 (8%)
Query: 1 MSIDLNHPLR---KKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEM 57
M D++ PL + + +R++ + + L I+G + +I S + + +
Sbjct: 1 MGNDIHKPLGTNTRPSAQRQARPASAWASRLAIGLVLLAILGSAGWIAFSSSQIERLGTS 60
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC------------NQLKNDSSQHDGQ 105
+ + P + D S + ++V + L++ Q +
Sbjct: 61 V------TASGPGSDTPPDTVDVASAQNQKEDSVSGQSGSGISGTSDDPLQSLHGQSGAE 114
Query: 106 IQNDISGK---TVVNKP-----------TRSTSIDSLPTIEERLILGLSKKELLAKNKVG 151
+ + V P T + P + + ++ + V
Sbjct: 115 VVKTLDDDGNEIVTITPLQRPDNRPVLLTPPGRVGQNPRLAHLPDPSVLEEAGIGDLPVR 174
Query: 152 REDTEVPAMDK-NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
E+ E P S A GAR+ I+V GLG+SQTGTQ AI LP +ITLAFA+NGNSL
Sbjct: 175 GENGERPFDIYGRPWSGARGARVVIIVGGLGLSQTGTQHAIAALPEDITLAFAANGNSLQ 234
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
RWM+EA+++G E +LQIP + FD N+ TL V + L+ L S+ R T Y G+
Sbjct: 235 RWMQEARREGHEILLQIPFEPFDYPANDPGPRTLTVEAGAEANLDNLHASMARITNYTGI 294
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
N+ G LS+ ++ E + ++ A RGL+F DDG+S ++LT + L +P+ AD+ LD
Sbjct: 295 TNFMGGRFLSDADALEPVMRDIADRGLMFLDDGTSAQSLTEPFSKTLGIPFAAADMVLDA 354
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+R I KL LE AR G AIGVA AF+ S++ I+ W + R + +V S
Sbjct: 355 TQERGYILAKLDDLERSARRNGIAIGVASAFEVSVDAIASWANEAKARGIEIVSASA 411
>gi|115522300|ref|YP_779211.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisA53]
gi|115516247|gb|ABJ04231.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisA53]
Length = 403
Score = 281 bits (720), Expect = 9e-74, Method: Composition-based stats.
Identities = 123/410 (30%), Positives = 183/410 (44%), Gaps = 23/410 (5%)
Query: 1 MSID-LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIP 59
MS D L+ PL +K +++ F + L F F+ + Y T E I
Sbjct: 1 MSTDELSTPLGRKPVRKRGFRLPFSAVQALAAAFALFLGLFAYYATFRENP--TGGEPIA 58
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG---KTVV 116
I+ + E K P+K ++ Q I + SG + VV
Sbjct: 59 RVAIK-PEQLGGKAAAPAESKDKPAKSESAAKATPPAEAEGQRTVTIIDGTSGERKQVVV 117
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG------ 170
T I+ + G++ K LL +++ G + K F + A+G
Sbjct: 118 ASETAGAKIERDEA--PTSVAGINPK-LLEQSRYGAIPIAADGL-KPFAAYATGSDADRA 173
Query: 171 -----ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
IAIVV GLG+ T AI LPA +TLAF G+ + + A+ + E +L
Sbjct: 174 TAARLPTIAIVVGGLGVGAAKTADAIMKLPAAVTLAFTPYGSDPNGLVARARAQRHEVLL 233
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
QIPM+ F+ N+ TL + + +Q ++RL + L R GY G+ N+ G + +
Sbjct: 234 QIPMEPFEYPDNDPGPQTLLTSLSAEQNIDRLHWHLSRFQGYVGIANFMGGRFVITDTAL 293
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
I KE AKRGL + DDG +PR+L LA +P+ ADL +D +I + L LE
Sbjct: 294 SPIMKEAAKRGLGYLDDGQAPRSLASSLAAAQTVPFGKADLGIDAVPTALEIDKALSRLE 353
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+AR G AIG A A SIE I+ W + R + +VPL+ A L S S
Sbjct: 354 ALARENGNAIGTASALPVSIERIAAWAKSLQSRGLLLVPLTT-AMLKSKS 402
>gi|144898156|emb|CAM75020.1| Protein of unknown function DUF610 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 222
Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IA+V+ LG+ + ++R + LPA +TLA+ + ++L + A+++G E ++ +PMQ
Sbjct: 2 IAVVIDDLGVDRKRSER-VTTLPAPLTLAWMTYADNLRPITQAARQRGHELMVHVPMQPQ 60
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
ESY + L+V ++L RLR+ L R G+ G+ N+ G+ +++ V+ E
Sbjct: 61 SESY-DPGPDVLEVGLPTEELRRRLRWGLSRFDGFVGINNHMGSRFTADRAGMNVVMDEI 119
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
RGLLF D ++ +++ LA + +P+ ++LD+++ +R +L E AR G
Sbjct: 120 RARGLLFLDSVTTQKSVAPDLARQYGVPFAARHVFLDNEMTVSAVRGQLAKTEAYARKYG 179
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AI + D +IE ++ WL + +VP++ + K
Sbjct: 180 AAIAIGHPHDGTIEALAGWLPGLEAKGFVLVPVTTIVK 217
>gi|91975045|ref|YP_567704.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB5]
gi|91681501|gb|ABE37803.1| protein of unknown function DUF610, YibQ [Rhodopseudomonas
palustris BisB5]
Length = 411
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 116/414 (28%), Positives = 188/414 (45%), Gaps = 30/414 (7%)
Query: 4 DLNHPLRKKTPK-RKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISE------ 56
+L+ PL +K + R+ I++ + L F++G + L ++ +G
Sbjct: 7 ELSTPLGQKRGRLRRFRLPFTITQA-IATLLGVFLLGFLGFALFNNDPLGGEPTVQVMIK 65
Query: 57 -MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG--- 112
P AP + + +D Q I + G
Sbjct: 66 PPAPDEKKEAAAPADKSSAAKAAKSEFAEAKDGKDAVQP-----GQKTITIIDGSKGTRQ 120
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV----PAMDKNFCSNA 168
VV+ + +D+ P E + G++ K LL +++ G P ++A
Sbjct: 121 DVVVSSGSGDDKVDA-PPAEPAMANGINPK-LLEQSRYGMIPVAAGALKPVSAYAMTTDA 178
Query: 169 SGAR------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
A+ IAIVV+GLG+ T A+ LP +TLAF G+ + +++A+ K E
Sbjct: 179 DRAKAEKMPTIAIVVTGLGVGAARTNDAVIKLPRAVTLAFTPYGSDPGKLVEQARAKQHE 238
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+LQIPM+ FD N+ TL + +Q L+RL + L R GY G+ N+ GA ++
Sbjct: 239 VLLQIPMEPFDYPDNDPGPQTLLTSGAPEQNLDRLTWHLSRIQGYVGLSNFMGARFVATD 298
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + I +E AKRGL + DDGS+PR++ LA L +P+ AD +D +I + L
Sbjct: 299 AAMQPIIREAAKRGLGYLDDGSAPRSVAPSLAKSLAMPFARADSAIDAVPTAAEIDKALA 358
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
LE +A+ G A+G A A SIE I W + R + +VPL +A L S S+
Sbjct: 359 RLEALAKERGSAVGTASALPVSIERIVSWSKSLESRGILLVPL-TMAMLKSKST 411
>gi|83310908|ref|YP_421172.1| hypothetical protein amb1809 [Magnetospirillum magneticum AMB-1]
gi|82945749|dbj|BAE50613.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 374
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 74/376 (19%), Positives = 151/376 (40%), Gaps = 19/376 (5%)
Query: 18 SFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNI 77
+ + +G+ + VG+ + + + G + P +E AP+ + P
Sbjct: 16 PLWERPSVLVGVMVAVLVLGVGIGLALGLWS---GKAGKAPPPGAEQEPAPVIMASP--- 69
Query: 78 EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLIL 137
+ + + ++ + G + + ++ + +L +
Sbjct: 70 ----AAPSQPMPSAGDEPDDGRPLLQPPPPRPDPGSSEALEFGHASDVVALAPLPPPPPA 125
Query: 138 GLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
K R VP IAI++ LG+ + ++R + L
Sbjct: 126 PEVKLPPAGAAIWLRNALPVP-------KTGGKPVIAIIIDDLGVDRRRSER-MAQLKGP 177
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
+TL++ + + +A+ +G E ++ +PMQ SY + + L+V + ++ RL
Sbjct: 178 LTLSYMTYAEDVAHQSHDARARGHELMVHVPMQPQSASY-DPGAEVLEVGLSSDEIRRRL 236
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
+ L R GY G+ N+ G+ S+ V+ E +RGL F D +S R + A
Sbjct: 237 DWGLSRFDGYVGINNHMGSRFTSDPAGMRVVMAELRRRGLAFIDSVTSERTVGAETARHY 296
Query: 318 NLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHV 377
+P+ ++LD+ +R +L E AR G AI + D +IE ++ WL
Sbjct: 297 GVPFAARHVFLDNDQGVAHVRAQLAKTEAYARKHGAAIAIGHPHDGTIEALAGWLPGLEG 356
Query: 378 RDVSVVPLSCLAKLSS 393
R ++VP+S + ++ +
Sbjct: 357 RGFALVPVSTIIRMGN 372
>gi|325294144|ref|YP_004280008.1| hypothetical protein AGROH133_09217 [Agrobacterium sp. H13-3]
gi|325061997|gb|ADY65688.1| hypothetical protein AGROH133_09217 [Agrobacterium sp. H13-3]
Length = 373
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 128/377 (33%), Positives = 181/377 (48%), Gaps = 28/377 (7%)
Query: 29 LFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDN 88
L L I GLS+Y +S +++ A P T P ED + D
Sbjct: 3 LSALAVLTIGGLSVYTALS------------PGNLQKTASGPDTQPQLAEDAPKTAAADV 50
Query: 89 --NTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILGLSKKE-- 143
LK +S + I VV+ + P + G +
Sbjct: 51 ADPNDTAGLKPESGRSGANINRATMPDGNVVSVYSPRPRDSDGPVLMSGQTYGQDPRMAT 110
Query: 144 -----LLAKNKVGREDTEVPAMDKN------FCSNASGARIAIVVSGLGISQTGTQRAIN 192
LL + GR + S A G R+AIVV GLG+SQTG+Q+AI
Sbjct: 111 RPNDALLEETAFGRLPVVGADGLRPMEQYARPWSGARGTRVAIVVGGLGLSQTGSQKAIR 170
Query: 193 LLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQ 252
LP +TL FA++GNSL RWM+EA+++G E +LQIP++ F TL +
Sbjct: 171 ELPPEVTLGFAASGNSLQRWMQEARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKV 230
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRV 312
++RL S+ + T Y G+MNY G LS + + E + ++ KRGLLF DD SS ++L+
Sbjct: 231 NIDRLHRSMAKITNYTGIMNYLGGRFLSEQAALEPVMRDIGKRGLLFLDDASSAQSLSGG 290
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A ++ P AD+ LD +V I KL LE IAR GQAIGVA AFDESI IS+W
Sbjct: 291 IAKAISAPQGFADVLLDGEVTEATILRKLDELERIARRNGQAIGVASAFDESIAAISKWS 350
Query: 373 QQEHVRDVSVVPLSCLA 389
++ R + +V +S L
Sbjct: 351 REAGGRGIEIVGVSALV 367
>gi|254470624|ref|ZP_05084027.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211959766|gb|EEA94963.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 387
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 103/385 (26%), Positives = 169/385 (43%), Gaps = 25/385 (6%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
+ +G+ ++ F G I+I I G P + I + + P +IE
Sbjct: 2 PLGLIGVAIMTVIFTTGF-IWIGIVDDPNGGE----PMATIELSSALDGVAPSDIEIVDL 56
Query: 83 PSKRD-----------NNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTI 131
P N + S Q +++ SG T + R + L
Sbjct: 57 PDGSQLDLIEAEQFDANGVGPDGSYRPSRQLGSALKDQASGPTSLVDLARRVDYEGLDGG 116
Query: 132 EERLILGLSK-KELLAKNKVGREDTEVPAMDKNFCSNASGA--------RIAIVVSGLGI 182
L ++LL NK G P + + A RIAI+++G+G+
Sbjct: 117 FSSESLSTEPIEQLLEPNKFGSLPKISPEGVRPLDAYARRPNPATLTQARIAILINGIGL 176
Query: 183 SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
+ T +AI LPA+I+L + G+ ++ WM+ A+ G E +LQ PM+ FD N+
Sbjct: 177 NSDMTIKAIEDLPADISLGLSPYGDDVNSWMESARLSGHEVLLQAPMEPFDYPDNDAGPQ 236
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
+L +Q RL + L + + Y G++N+ G SN+ + RGL++ DD
Sbjct: 237 SLLTNLDQKQNDERLSWVLGQTSNYVGLVNFMGDRFTSNETRMSEFLSKVRDRGLMYVDD 296
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
GSSPR+ +A +P++ ADL LD + + I +L LE IAR G A+ A AF
Sbjct: 297 GSSPRSKAGQVAGTQKVPFVQADLVLDQNLSAEAIGTQLLELETIARQRGIAVATATAFP 356
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSC 387
++ + W Q+ R +S+VP+S
Sbjct: 357 VTLNALEAWSQRLEERGLSLVPVSS 381
>gi|148252020|ref|YP_001236605.1| hypothetical protein BBta_0413 [Bradyrhizobium sp. BTAi1]
gi|146404193|gb|ABQ32699.1| hypothetical protein BBta_0413 [Bradyrhizobium sp. BTAi1]
Length = 407
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 104/405 (25%), Positives = 176/405 (43%), Gaps = 16/405 (3%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRL-GLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
+L+ PL + +R+ + L L +L F+V + + L +G E I
Sbjct: 7 ELSAPLGQTEKRRRRRIRLPFTLLQALAVLLGLFLVVFAGFALFGDNPLG--GEPIARIA 64
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK---TVVNKP 119
I A D + + ++ ++ + I + SG +
Sbjct: 65 INAGAKPDDKSGAAKPDAKHGATAEHGAAAPAKQDGGDRKTVTIIDGSSGARQEVAIGGG 124
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGR--------EDTEVPAMDKNFCSNASGA 171
T+ + G+ + LL K++ G + A + + A
Sbjct: 125 GSETAEPGAAAPAASQMPGVDPR-LLEKSRYGMIPVMADGVKPFTAYAAEADRAKAARMP 183
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+AIV+ GLG+ T AI LP +TLAF G + + A+ + E +LQ+PM+
Sbjct: 184 AVAIVIGGLGVGAAKTVEAIMKLPPAVTLAFTPYGADPTKLAERARAQRHEILLQVPMEP 243
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+D N+ TL T Q ++RL + + R GY G+ N+ GA ++ + + + I E
Sbjct: 244 YDYPDNDPGPQTLLATLGPDQNIDRLFWHMSRLQGYVGIGNFMGARFVATEAAMQPIVNE 303
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
AKRGL FDDG++PR++ LA +P+ D+ +D +I L LE +A+
Sbjct: 304 AAKRGLALFDDGAAPRSVAASLAAGRAMPFAKGDVAIDAVPTPVEIDNALAKLESLAKER 363
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AIG A A SI+ I W++ + + +VPL+ A L S S+
Sbjct: 364 GIAIGTASALPVSIDRIGAWIKGLDRKGILLVPLTT-AMLKSKSN 407
>gi|117926782|ref|YP_867399.1| hypothetical protein Mmc1_3508 [Magnetococcus sp. MC-1]
gi|117610538|gb|ABK45993.1| protein of unknown function DUF610, YibQ [Magnetococcus sp. MC-1]
Length = 482
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 4/339 (1%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND--I 110
++ + + E + P T ++ P+ + + + G +
Sbjct: 132 EEADTVLKATPSEASSEPATKAATDLEQAKPTPAELEEQPSVEIEADGEKGGLGPSATPA 191
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ V ++ ++ D E L ++ L V ++
Sbjct: 192 TQPLVPSETAKAHGDDKSHPKSESKSDILYEEHLSEDLDKPEPPAVVEKKPVP-AKHSHM 250
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+IA+++ LG + G R I LPA+ITLA G + + A KKGQE IL PMQ
Sbjct: 251 VKIAVIIDDLGYN-GGVGRGIVSLPADITLAVLPGGPYSRQLVNMAHKKGQEIILHQPMQ 309
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
L ++ L ++L R G+ N+ G+ L N+ + K
Sbjct: 310 PQGYPRVNPGPGALLEGMDADEIAEVLNHNLERFPEVVGINNHMGSALTENRVIMNDVMK 369
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
KR L F D +SPR++ A +P ++LD++ I ++L+ EEIA+
Sbjct: 370 VLVKRELYFIDSRTSPRSVAYRAALSHGVPRAKRSVFLDNKRTVAAILKRLQEAEEIAKR 429
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+G AI + + +++ + QWL R + VV S L
Sbjct: 430 SGSAIAIGHPYGVTLQALKQWLPGLQARGIVVVRASNLL 468
>gi|110635778|ref|YP_675986.1| protein of unknown function DUF610, YibQ [Mesorhizobium sp. BNC1]
gi|110286762|gb|ABG64821.1| protein of unknown function DUF610, YibQ [Chelativorans sp. BNC1]
Length = 330
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 109/323 (33%), Positives = 168/323 (52%), Gaps = 12/323 (3%)
Query: 76 NIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEER- 134
+ + ++SPS + + S H I + S P R + E
Sbjct: 2 SPDRERSPSATAKPAPQLEAASASRLHSTFIPHLDSDDV---GPLRRGLVFRDSLAEGGQ 58
Query: 135 --LILGLSKKELLAKNKVGREDTEVPAMDKNF------CSNASGARIAIVVSGLGISQTG 186
+ L + L+ ++++G + F S A GARIAIV+ GLGISQTG
Sbjct: 59 NLRVAHLPDRALIEESELGPLPVRAADGLRPFDAYARPWSGARGARIAIVIGGLGISQTG 118
Query: 187 TQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKV 246
TQ AI LP ITLAFA GNSL RWM+EA++ G E I+Q+P++ YTL
Sbjct: 119 TQEAIEKLPPEITLAFAPLGNSLMRWMQEARRDGHEVIMQVPLEPAGYPSTNPGRYTLLT 178
Query: 247 TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP 306
+ + LR+ L R T Y GVMNY GA +++++ +++ E ++RGLL+FDDG S
Sbjct: 179 NVGADKNIRNLRWVLSRITNYTGVMNYMGARFTADRKAMDLLMDELSQRGLLYFDDGMSA 238
Query: 307 RNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
R+L +A +P++ D +D + +R I +KL LE IAR G A+G +A + +++
Sbjct: 239 RSLAEEVALAKGVPFVAGDDVIDQERERGAILKKLDELERIARAKGFAVGSGIALNATVD 298
Query: 367 VISQWLQQEHVRDVSVVPLSCLA 389
++ W + R V +VP+S +A
Sbjct: 299 AVTSWAGEVRKRGVELVPISAVA 321
>gi|209883750|ref|YP_002287607.1| protein of unknown function, YibQ [Oligotropha carboxidovorans OM5]
gi|209871946|gb|ACI91742.1| protein of unknown function, YibQ [Oligotropha carboxidovorans OM5]
Length = 390
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/402 (26%), Positives = 176/402 (43%), Gaps = 22/402 (5%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M D + PL + P+R+ F + + + F++ + + +G
Sbjct: 1 MVDDFSAPLGQNAPRRRRFRLPFTAPQAIATVSGLFLLTFLGFAIFGRDPMGGE------ 54
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK---TVVN 117
PI + + + Q I + SG+ VV
Sbjct: 55 -------PIVTATYDPAKLPGATQSAIPPAAPITAAAPNGQKTVTIIDGSSGQRREMVVG 107
Query: 118 KPTRSTSIDSLPTIE---ERLILGLSKKELLAKNKVGREDTEVPAM--DKNFCSNASGAR 172
+ + P ++ + +L S+ L+ + G + V A D A+
Sbjct: 108 AEGSTDTESDTPALQTGINQRLLENSRYGLVPISADGLKPWRVYAASTDLQRARAATMPT 167
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
I++V+ GLG+ T A+ LP +TLAF G+ + + A+ + E +LQ+PM+ +
Sbjct: 168 ISLVIGGLGVGSAKTNDAVLRLPGAVTLAFTPYGSDPGKLIARARAQKHEVLLQVPMEPY 227
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D N+ TL T + +Q ++RL + + R GY G+ N+ G+ + + + + I +E
Sbjct: 228 DYPDNDPGPQTLLATASAEQNVDRLMWHMSRFQGYVGLANFMGSRFVVSDAAMQPIVQEA 287
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
A+RGL +FDDGS PR+L LA P ADL +D +I + L LE +AR G
Sbjct: 288 ARRGLAWFDDGSVPRSLAGQLAGAQGAPSTTADLVIDQVPTSAEIDKNLAKLENLARERG 347
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL-SCLAKLSS 393
A+G+A A SIE I W Q+ R + +VPL + L K S
Sbjct: 348 TAVGMASALPVSIERIGAWAQRLENRGILLVPLTTTLMKSKS 389
>gi|157377603|ref|YP_001476203.1| protein of unknown function DUF610, YibQ [Shewanella sediminis
HAW-EB3]
gi|157319977|gb|ABV39075.1| protein of unknown function DUF610, YibQ [Shewanella sediminis
HAW-EB3]
Length = 253
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 4/224 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
A +++AI++ +G Q+ A+ LP +T + + K+A G E +L
Sbjct: 15 GYAEASQVAIIIDDIGYRQS--DEAVLSLPNTVTFSVLPHTPLGSEVAKKAHNMGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L T +L + L + G N+ G++L E
Sbjct: 73 HLPMQALNGK--TMGPGGLTNTMDEAELKHTLEKAFDNIPYAKGANNHMGSLLTQLDEPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + +R L F D ++ A +L +P + ++LD+ V + + E+ + L
Sbjct: 131 LWVMESLKQRELYFVDSMTTRFTKASNKAEQLGIPLLRRQVFLDNDVSQSALEERFEHLI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+A GQA+ +A + E+I+ + + L + + +V S L
Sbjct: 191 SLAHKQGQAVAIAHPYPETIKFLKRNLHRLDKAGIELVKTSSLL 234
>gi|238754759|ref|ZP_04616111.1| hypothetical protein yruck0001_30950 [Yersinia ruckeri ATCC 29473]
gi|238707067|gb|EEP99432.1| hypothetical protein yruck0001_30950 [Yersinia ruckeri ATCC 29473]
Length = 328
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 93/228 (40%), Gaps = 4/228 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A +++IV+ G + I +P I++A +A +G+E ++
Sbjct: 20 TAQAGKLSIVIDDFGYRPQN-ENQILQMPLPISVAILPYAPHAKEMAIKAHSQGREVLIH 78
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 79 LPMAPLSRQPLERD--TLQPSMSSEEIQRIIRQAVSNVPYAVGMNNHMGSAMTSSLPGMQ 136
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + L F D + A + + ++LDD + IR++ +
Sbjct: 137 KVMQALEHYSLYFLDSVTIGNTQASKAAEGTGVKVIKRKVFLDDVQNDVAIRQQFNRAIQ 196
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+AR G AI + +I V+ Q L+Q D+ +V S L P
Sbjct: 197 LARKNGSAIAIGHPHPSTIRVLQQMLRQLPP-DIVLVRPSALLNEPVP 243
>gi|300721222|ref|YP_003710492.1| hypothetical protein XNC1_0147 [Xenorhabdus nematophila ATCC 19061]
gi|297627709|emb|CBJ88235.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus nematophila ATCC 19061]
Length = 349
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+F NA AR+AIV+ +G + + I +P +++A + +A ++G+E
Sbjct: 29 SFTLNARAARLAIVIDDVGY-RIHEENKILQMPIAVSVAILPDSPHGREMAVKAYQQGRE 87
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E TL + +++ ++ ++++ G+ N+ G+ + S+
Sbjct: 88 VLIHLPMAPLSQQPLEK--NTLHPAMSREEIGRIIQEAIQKVPHAVGMNNHMGSAMTSDL 145
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + + ++ L F D + A ++P + +++LD+ + R +
Sbjct: 146 TGMEKVMQVLSRHHLYFLDSVTIGNTQVTKAATGTSVPVIRRNIFLDNVQTEAETRHQFN 205
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+AR G AI + ++ + Q L D+ +V L
Sbjct: 206 RAITLARKKGSAIAIGHPHPTTVRALQQALATLP-DDIELVTPGILL 251
>gi|238794396|ref|ZP_04638007.1| hypothetical protein yinte0001_39420 [Yersinia intermedia ATCC
29909]
gi|238726297|gb|EEQ17840.1| hypothetical protein yinte0001_39420 [Yersinia intermedia ATCC
29909]
Length = 343
Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + I +P I++A N +A +G+E
Sbjct: 17 IANAAQAGKLSIVIDDFGYRPQNENK-ILQMPLPISVAILPNAPYAREMAIKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIMRQAVNNVPYAKGMNNHMGSAMTSSFS 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + +E L F D + + A ++ + ++LDD + IR++
Sbjct: 134 GMQKVMQELDHYQLYFLDSVTIGNSQAGRAAEGTHVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVRPSALLN 239
>gi|56415596|ref|YP_152671.1| hypothetical protein SPA3558 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364523|ref|YP_002144160.1| hypothetical protein SSPA3321 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129853|gb|AAV79359.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096000|emb|CAR61587.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 320
Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|168464987|ref|ZP_02698879.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195632452|gb|EDX50936.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 320
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|168232551|ref|ZP_02657609.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194470628|ref|ZP_03076612.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456992|gb|EDX45831.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205333317|gb|EDZ20081.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 320
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|62182199|ref|YP_218616.1| hypothetical protein SC3629 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|197248431|ref|YP_002148639.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|224585506|ref|YP_002639305.1| hypothetical protein SPC_3788 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62129832|gb|AAX67535.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|197212134|gb|ACH49531.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|224470034|gb|ACN47864.1| hypothetical protein SPC_3788 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322716687|gb|EFZ08258.1| Uncharacterized protein yibQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 320
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVLKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|168260540|ref|ZP_02682513.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350154|gb|EDZ36785.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 320
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|204928803|ref|ZP_03220002.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204322236|gb|EDZ07434.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322612872|gb|EFY09824.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618937|gb|EFY15824.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625286|gb|EFY22113.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322630047|gb|EFY26820.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634238|gb|EFY30973.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635861|gb|EFY32570.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643053|gb|EFY39629.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322643820|gb|EFY40369.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649830|gb|EFY46253.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653036|gb|EFY49371.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661145|gb|EFY57373.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662366|gb|EFY58579.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667244|gb|EFY63410.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674379|gb|EFY70472.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678413|gb|EFY74474.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680919|gb|EFY76953.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687145|gb|EFY83118.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192105|gb|EFZ77338.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198212|gb|EFZ83319.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200832|gb|EFZ85902.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206586|gb|EFZ91544.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210501|gb|EFZ95387.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216211|gb|EGA00939.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220434|gb|EGA04888.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225297|gb|EGA09531.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228411|gb|EGA12542.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234232|gb|EGA18320.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237217|gb|EGA21284.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244736|gb|EGA28740.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249217|gb|EGA33135.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250928|gb|EGA34804.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257323|gb|EGA41022.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262248|gb|EGA45809.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264541|gb|EGA48045.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268831|gb|EGA52289.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 320
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|161616784|ref|YP_001590749.1| hypothetical protein SPAB_04603 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168818465|ref|ZP_02830465.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445745|ref|YP_002042956.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|198245856|ref|YP_002217668.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205354691|ref|YP_002228492.1| hypothetical protein SG3725 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858943|ref|YP_002245594.1| hypothetical protein SEN3528 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238910259|ref|ZP_04654096.1| hypothetical protein SentesTe_03869 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|161366148|gb|ABX69916.1| hypothetical protein SPAB_04603 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404408|gb|ACF64630.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|197940372|gb|ACH77705.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205274472|emb|CAR39505.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205344542|gb|EDZ31306.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|206710746|emb|CAR35107.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320088125|emb|CBY97887.1| Uncharacterized protein yibQ Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326625452|gb|EGE31797.1| Uncharacterized protein yibQ [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326629830|gb|EGE36173.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 320
Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|16766991|ref|NP_462606.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167994326|ref|ZP_02575418.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168241884|ref|ZP_02666816.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194447310|ref|YP_002047737.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265013|ref|ZP_03165087.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|200387258|ref|ZP_03213870.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|16422273|gb|AAL22565.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194405614|gb|ACF65833.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197243268|gb|EDY25888.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|199604356|gb|EDZ02901.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205327801|gb|EDZ14565.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205338812|gb|EDZ25576.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|261248854|emb|CBG26707.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995965|gb|ACY90850.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160243|emb|CBW19765.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914732|dbj|BAJ38706.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226758|gb|EFX51808.1| putative divergent polysaccharide deacetylase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323132066|gb|ADX19496.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990555|gb|AEF09538.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 320
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|188025459|ref|ZP_02958730.2| hypothetical protein PROSTU_00480 [Providencia stuartii ATCC 25827]
gi|188023551|gb|EDU61591.1| hypothetical protein PROSTU_00480 [Providencia stuartii ATCC 25827]
Length = 303
Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
AS A++AIV+ G +T I LP IT+A + +A ++G+E
Sbjct: 2 MSLQASAAKLAIVIDDFGY-RTKEDNQILALPTPITIAILPDSPHGQLVANKAHQQGREV 60
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
I+ +PM+ + E TL T + +++ ++ ++ + G+ N+ G+ + S+
Sbjct: 61 IIHMPMKPLSKQPLEK--NTLSPTMSAEEIDRIIKRAISQVPYAKGMNNHMGSEMTSSLS 118
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ +K F D + A + +P + ++LD+ ++ R +L
Sbjct: 119 GMRHVMNSLSKANFFFLDSVTIGNTQAVKAANEFGVPVVRRHIFLDNHQSEEETRVQLNK 178
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AR G AI + ++ + ++L Q D+ +V +S L + SS
Sbjct: 179 AVAYARKHGNAIAIGHPHPSTVRALQKYLPQLPA-DIELVSVSALLQGSS 227
>gi|163749815|ref|ZP_02157060.1| hypothetical protein KT99_01686 [Shewanella benthica KT99]
gi|161330329|gb|EDQ01308.1| hypothetical protein KT99_01686 [Shewanella benthica KT99]
Length = 256
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S + A++AI++ +G Q+ A+ LP NITL+ + + A ++G E +L
Sbjct: 15 SYVNAAQVAIIIDDIGYRQS--DEAVLTLPDNITLSILPHTPLGNSVAHIAHERGYEVML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + T + + + + G N+ G++L E
Sbjct: 73 HLPMQALNGKKLGPGGIT--NDMSETDIKQTISQAFENIPFAKGANNHMGSLLTQLDEPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + + + L F D ++ A KL +P + ++LD+ V + ++ + L
Sbjct: 131 QWVMESLKQHHLYFVDSMTTRYTKAGSTADKLGIPQLKRQIFLDNDVSPAGLNQQFERLI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+A GQ + +A E+IE + L + +S+V S L
Sbjct: 191 ALAHRQGQVVAIAHPHPETIEYLKLNLPRLQQEGISLVKTSELL 234
>gi|168235310|ref|ZP_02660368.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194735049|ref|YP_002116641.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194710551|gb|ACF89772.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197291430|gb|EDY30782.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 320
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|46201425|ref|ZP_00055095.2| COG2861: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 373
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 80/392 (20%), Positives = 148/392 (37%), Gaps = 28/392 (7%)
Query: 9 LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAP 68
+ K P + + + + + + L ++ S +E P VI E
Sbjct: 3 MGNKVPLWERPSVLVGLMIAVLVAGVGIGLVLGLWSGKSAKTQMAGAEQAPAPVISETTS 62
Query: 69 IPLTI----PLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
P N E + + G + +S +P S
Sbjct: 63 PPPPPPPLPSANEEADDGRPLLQPPPPRPDPGSSEALEFGHASDVVSLVPAPAQPPASPE 122
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQ 184
+ P + R VP IAI++ LG+ +
Sbjct: 123 VKLPPAGAAVWL---------------RNALPVP-------KTGGKPVIAIIIDDLGVDR 160
Query: 185 TGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTL 244
++R + L +TL++ + + R +A+ G E ++ +PMQ SY + + L
Sbjct: 161 RRSER-MAQLKGPLTLSYMTYAEDVARQSHDARAHGHELMVHVPMQPQSASY-DPGAEVL 218
Query: 245 KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS 304
+V +++ RL + L R GY G+ N+ G+ S+ V+ E +RGL F D +
Sbjct: 219 EVGLPPEEIRRRLDWGLSRFDGYVGINNHMGSRFTSDAAGMRVVMAELRRRGLAFIDSVT 278
Query: 305 SPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDES 364
S + A +P+ ++LD+ +R +L E AR G AI + D +
Sbjct: 279 SEHTVGAETARHYGVPFAARHVFLDNDQGVAHVRAQLAKTEAYARKHGAAIAIGHPHDGT 338
Query: 365 IEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
IE ++ WL R ++VP+S + ++ + +S
Sbjct: 339 IEALAGWLPGLEARGFALVPVSTIIRMGNGTS 370
>gi|146337569|ref|YP_001202617.1| hypothetical protein BRADO0424 [Bradyrhizobium sp. ORS278]
gi|146190375|emb|CAL74371.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 405
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 103/402 (25%), Positives = 169/402 (42%), Gaps = 12/402 (2%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRL-GLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
+L+ PL + +R+ + L L ++ +V + + L +G E +
Sbjct: 7 ELSAPLGQTETRRRRRIRLPFTALQALAMVLGLILVVFAGFALFGDNPLG--GEPVARVA 64
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
I E A + + + K D + I + SG
Sbjct: 65 INEGAKPGDKPDAAAKPDAKSDAKSEHGAAAAAKPDGERKTITIIDGSSGARQEVAIGAG 124
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDT--------EVPAMDKNFCSNASGARIA 174
P + LL K++ G A D + A +A
Sbjct: 125 GRDTPEPGAAPANPMPGVDPRLLEKSRYGMIPVMTDGLKSFTAYAADADRAKAARMPAVA 184
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
IV+ GLGI T AI LP +TLAF G+ + + A+ + E +LQ+PM+ +D
Sbjct: 185 IVIGGLGIGAAKTVDAIMKLPPAVTLAFTPYGSDPSKLAERARAQRHEILLQVPMEPYDY 244
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
N+ TL T Q ++RL + + R GY G+ N+ GA ++ + + + I E AK
Sbjct: 245 PDNDPGPQTLLATLGPDQNIDRLFWHMSRLQGYVGIGNFMGARFVATETAMQPIVNEAAK 304
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
RGL FDDG++PR++ LA +P+ D+ +D +I L LE +A+ G A
Sbjct: 305 RGLALFDDGAAPRSVAASLATGRAVPFAKGDVAIDAVPTAVEIDNALAKLESLAKERGVA 364
Query: 355 IGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+G A A SI+ I W++ + + +VPL+ A L S S+
Sbjct: 365 VGTASALPVSIDRIGTWIKGLDRKGILLVPLTT-AMLKSKSN 405
>gi|167549047|ref|ZP_02342806.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205325644|gb|EDZ13483.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 320
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ I LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQILALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G I + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RAIELARRNGSTIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|13473411|ref|NP_104978.1| hypothetical protein mll3999 [Mesorhizobium loti MAFF303099]
gi|14024160|dbj|BAB50764.1| mll3999 [Mesorhizobium loti MAFF303099]
Length = 247
Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats.
Identities = 102/243 (41%), Positives = 146/243 (60%), Gaps = 3/243 (1%)
Query: 147 KNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNG 206
++ GR +V A S A GAR+AIV+ GL +SQTGTQ AI LPA +TLAFA G
Sbjct: 2 RSADGRRPFDVYA---RPWSGARGARVAIVIGGLAVSQTGTQAAIAKLPAEVTLAFAPQG 58
Query: 207 NSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTG 266
NS+ RWM+ A++ G E ++Q+P++ FD TL V + ++ L L ++L R T
Sbjct: 59 NSIGRWMQAARQGGHEIVMQVPLEPFDYPNVNPGRNTLTVAGSAEENLKNLHWALSRTTN 118
Query: 267 YFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADL 326
Y GVMNY GA ++K + E E KRGL + DDGSS R+L LA K +P++ D
Sbjct: 119 YTGVMNYMGARFSADKAAMEPFMAELGKRGLAYIDDGSSARSLAPDLALKDGVPFVAGDT 178
Query: 327 YLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
+D DR I +KL GLE AR G A+G+ AFD +++++S W+ + R + +VP+S
Sbjct: 179 AIDAVQDRGAILKKLDGLEATARAKGTAVGIGSAFDLTVDIVSSWIAEAKKRGIEIVPIS 238
Query: 387 CLA 389
+A
Sbjct: 239 AVA 241
>gi|16762604|ref|NP_458221.1| hypothetical protein STY4089 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144093|ref|NP_807435.1| hypothetical protein t3813 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163814|ref|ZP_03349524.1| hypothetical protein Salmoneentericaenterica_28901 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213420031|ref|ZP_03353097.1| hypothetical protein Salmonentericaenterica_20595 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427149|ref|ZP_03359899.1| hypothetical protein SentesTyphi_16972 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213647904|ref|ZP_03377957.1| hypothetical protein SentesTy_11844 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289824144|ref|ZP_06543741.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25367617|pir||AD0974 probable exported protein STY4089 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504909|emb|CAD03288.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139730|gb|AAO71295.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 320
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
E+AR G AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 193 RTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 246
>gi|238760441|ref|ZP_04621579.1| hypothetical protein yaldo0001_39810 [Yersinia aldovae ATCC 35236]
gi|238701336|gb|EEP93915.1| hypothetical protein yaldo0001_39810 [Yersinia aldovae ATCC 35236]
Length = 336
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A +++IV+ G + I +P I++A N +A +G+E +
Sbjct: 18 ASAAQAGKLSIVIDDFGYRPQNENK-ILQMPLPISVAILPNAPHAKEMAMKAHNQGREIL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 77 IHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYAKGMNNHMGSAMTSSLPG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 135 MQKVMQALEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 195 VELARRNGSAIAIGHPHPATIKVLQQMLPQLPT-DIVLVRPSELLN 239
>gi|237728916|ref|ZP_04559397.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226909538|gb|EEH95456.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 311
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + ++AIV+ G + T+ + +P+ I++A N +A G E
Sbjct: 18 FATPVFAGKLAIVIDDFGY-RPHTENQVLAMPSTISVAVLPNAPHAREMAIKAHNSGHEV 76
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R ++ + G+ N+ G+ + S+
Sbjct: 77 LIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIRDAVSKVPNAVGLNNHMGSAMTSSLF 134
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + + A + + ++LDD + IR +
Sbjct: 135 GMQKVMQALERYDLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNR 194
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + ++ V+ Q L D+++V S L
Sbjct: 195 AVELARRNGSAIAIGHPHPSTVRVLQQMLYSLPA-DITLVRPSSLLN 240
>gi|238897058|ref|YP_002921804.1| hypothetical protein KP1_5309 [Klebsiella pneumoniae NTUH-K2044]
gi|262040666|ref|ZP_06013904.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|238549386|dbj|BAH65737.1| hypothetical protein KP1_5309 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259042030|gb|EEW43063.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 315
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A +++IV+ G + T+ + LPA I++A N +A +G E
Sbjct: 16 ALAAPAFAGKLSIVIDDFGY-RPQTENQVLALPATISVAVLPNAPHAREMATKAHNQGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRNQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q + D+++V S L
Sbjct: 193 RAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPP-DITLVRPSSLLN 239
>gi|152994760|ref|YP_001339595.1| hypothetical protein Mmwyl1_0726 [Marinomonas sp. MWYL1]
gi|150835684|gb|ABR69660.1| protein of unknown function DUF610 YibQ [Marinomonas sp. MWYL1]
Length = 392
Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGT 187
IE + G K + L+K+ + VPA + RIAI++ LG ++ G
Sbjct: 125 DAPIESKPAGGFPKPDALSKSS---KKEVVPAKILAVDVHPKMPRIAILIDDLGYNRHGM 181
Query: 188 QRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247
++ +LP + LA + A+K+ + +L PM+ ++ + L
Sbjct: 182 DSSL-MLPVEVALAILPSTPFAMETALTAQKQKRITLLHAPME--NQRELKLGPGGLYAK 238
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPR 307
T +L L L G GV N+ G++L + +S + + + R L F D +SP+
Sbjct: 239 MTEHELKATLSKDLDGLPGIQGVNNHMGSLLTTKADSMKWVMETLKGRSLFFIDSLTSPK 298
Query: 308 NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV 367
++ + A + L + D++LD+ I ++ L ++AR G A+ + + E++
Sbjct: 299 SVAKKTAQEYGLETVSRDVFLDNIRTEQAIDKQFSRLLKLARLHGSALAIGHPYPETMAY 358
Query: 368 ISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ + L V +V LS L SS
Sbjct: 359 LKKRLNHLEQDGVRLVRLSDLLTASS 384
>gi|260466735|ref|ZP_05812921.1| protein of unknown function DUF610 YibQ [Mesorhizobium
opportunistum WSM2075]
gi|259029465|gb|EEW30755.1| protein of unknown function DUF610 YibQ [Mesorhizobium
opportunistum WSM2075]
Length = 392
Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats.
Identities = 116/400 (29%), Positives = 182/400 (45%), Gaps = 28/400 (7%)
Query: 1 MSIDLNHPLRK--KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMI 58
+ D+ PL + + P+ S + + +L +VG+S I +
Sbjct: 4 IGKDIERPLGQTVRVPRAAGKISAGVVASAIVVL---AVVGVSGAIALREKPF------- 53
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
R+ + ++ P + + ++ G I +T
Sbjct: 54 -----RKPQEVAVSTPKVTAAAEPAAPPALAPAAVPKAQTPAKTGGP--QIIHVQTEEGD 106
Query: 119 PTRSTSI---DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF------CSNAS 169
I D + I L K L+ ++ G + F S A
Sbjct: 107 GPPKAGIVIRDPSSIGQNLKIAHLPDKALIEASETGPLPMRAADGRRPFDVYARPWSGAR 166
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
GAR+AIV+ GL +SQTGTQ AI LP +TL FA GNS+ RWM+ A++ G E ++Q+P+
Sbjct: 167 GARVAIVIGGLAVSQTGTQAAIAKLPPEVTLGFAPQGNSIGRWMQAARQGGHEIVMQVPL 226
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ FD TL V + + L L ++L R T Y GVMNY GA ++ +
Sbjct: 227 EPFDYPSVNPGRNTLTVAASADENLKSLHWALSRTTNYTGVMNYMGARFSADATAMGPFM 286
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
E KRGL + DDGSS R+L LA K +P++ D+ +D DR +I +KL LE AR
Sbjct: 287 AELGKRGLAYIDDGSSARSLAPDLALKDGVPFVAGDMAIDAVQDRGEILKKLDSLEATAR 346
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G A+G+ AFD +++ +S W+ + R + +VP+S +A
Sbjct: 347 AKGFAVGIGSAFDLTVDTVSSWVAEAKKRGIEIVPISAVA 386
>gi|319780956|ref|YP_004140432.1| hypothetical protein Mesci_1219 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166844|gb|ADV10382.1| protein of unknown function DUF610 YibQ [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 392
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 114/398 (28%), Positives = 177/398 (44%), Gaps = 24/398 (6%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIV-GLSIYILISHAFVGTISEMIP 59
+ D+ PL + R + +S + +V G+S I + E+
Sbjct: 4 IGKDIERPLGQAV--RPPRAAGKLSGGAIMATVAVLVVAGISGAIALREKPFRKPQEV-- 59
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
P P+ + G P
Sbjct: 60 ------AVSTPKVTAAAEPAAAPPALAPAAPKPEAPVKSGGPQIIHV-QTEEGD----GP 108
Query: 120 TRSTSI--DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF------CSNASGA 171
++ + D + + + K L+ ++ G + F S GA
Sbjct: 109 PKAAIVIRDPSTVGQNLKVAHIPDKALIEASETGPLPVRAADGRRPFDVYARPWSGGRGA 168
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+AIV+ GL +SQTGTQ AI LPA +TLAFA GNS+ RWM+ A++ G E ++Q+P++
Sbjct: 169 RVAIVIGGLSVSQTGTQAAIAKLPAEVTLAFAPQGNSIGRWMQAARQSGHEIVMQVPLEP 228
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
FD TL V + + L L ++L R T Y GVMNY GA ++ + E E
Sbjct: 229 FDYPKVNPGRNTLTVAASADENLKSLHWALSRTTNYTGVMNYMGARFSADAAAMEPFIAE 288
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
KRGL + DDGSS R+L LA K +P++ D+ +D DR +I +KL LE AR
Sbjct: 289 LGKRGLAYIDDGSSARSLAPDLALKDGVPFVAGDMAIDAVQDRGEILKKLDSLEATARAK 348
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G A+G+ AFD +++ +S W+ + R + +VP+S +A
Sbjct: 349 GTAVGIGSAFDLTVDTVSSWVVEAKKRGIEIVPISAVA 386
>gi|161505759|ref|YP_001572871.1| hypothetical protein SARI_03935 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867106|gb|ABX23729.1| hypothetical protein SARI_03935 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 320
Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP +I++A N +A G E
Sbjct: 16 AFAQPVFAGKLAIVIDDFGY-RPHTENQVLALPPDISVAVLPNAPQAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R +++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPEMSSDEIDRIIREAVKNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + ++ V+ Q + + D+++V S L
Sbjct: 193 RAIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPSSLLN 239
>gi|123440475|ref|YP_001004469.1| hypothetical protein YE0075 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087436|emb|CAL10217.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 341
Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANTSLAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAKEMAIKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPLMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQVLEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVKASALLN 239
>gi|238789568|ref|ZP_04633352.1| hypothetical protein yfred0001_24040 [Yersinia frederiksenii ATCC
33641]
gi|238722321|gb|EEQ13977.1| hypothetical protein yfred0001_24040 [Yersinia frederiksenii ATCC
33641]
Length = 337
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANAAQAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAKEMAVKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQTLEHYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVDLARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVRPSALLN 239
>gi|288933028|ref|YP_003437087.1| hypothetical protein Kvar_0143 [Klebsiella variicola At-22]
gi|288887757|gb|ADC56075.1| protein of unknown function DUF610 YibQ [Klebsiella variicola
At-22]
Length = 318
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A +++IV+ G + T+ + LP+ I++A N +A G E
Sbjct: 16 ALAAPAFAGKLSIVIDDFGY-RPQTENQVLALPSTISVAVLPNAPHAREMATKAHNLGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAIGLNNHMGSAMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRNQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q + D+++V S L
Sbjct: 193 RAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPP-DITLVRPSSLLN 239
>gi|238798823|ref|ZP_04642292.1| hypothetical protein ymoll0001_38940 [Yersinia mollaretii ATCC
43969]
gi|238717331|gb|EEQ09178.1| hypothetical protein ymoll0001_38940 [Yersinia mollaretii ATCC
43969]
Length = 352
Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANAAQAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAREMAVKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVSNVPYAKGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQALEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPS-DIVLVRPSALLN 239
>gi|206578516|ref|YP_002236021.1| polysaccharide deacetylase family protein [Klebsiella pneumoniae
342]
gi|290511821|ref|ZP_06551189.1| yibQ [Klebsiella sp. 1_1_55]
gi|206567574|gb|ACI09350.1| polysaccharide deacetylase family protein [Klebsiella pneumoniae
342]
gi|289775611|gb|EFD83611.1| yibQ [Klebsiella sp. 1_1_55]
Length = 318
Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A +++IV+ G + T+ + LP+ I++A N +A G E
Sbjct: 16 ALAAPAFAGKLSIVIDDFGY-RPQTENQVLALPSTISVAVLPNAPHAREMATKAHNLGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRTQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q + D+++V S L
Sbjct: 193 RAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPP-DITLVRPSSLLN 239
>gi|152972465|ref|YP_001337611.1| hypothetical protein KPN_03959 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150957314|gb|ABR79344.1| hypothetical protein KPN_03959 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 315
Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A +++IV+ G + T+ + LP+ I++A N +A G E
Sbjct: 16 ALAAPAFAGKLSIVIDDFGY-RPQTENQVLALPSTISVAVLPNAPHAREMATKAHNLGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + +++ +R + + G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIREAYGKVPYAVGLNNHMGSAMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRNQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q + D+++V S L
Sbjct: 193 RAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPP-DITLVRPSSLLN 239
>gi|238750811|ref|ZP_04612309.1| hypothetical protein yrohd0001_10680 [Yersinia rohdei ATCC 43380]
gi|238710955|gb|EEQ03175.1| hypothetical protein yrohd0001_10680 [Yersinia rohdei ATCC 43380]
Length = 341
Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + I +P I++A N +A +G+E
Sbjct: 17 IANAAQAGKLSIVIDDFGYRPQNENK-ILQMPLPISVAILPNAPYAREMAVKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQVLEHYQLYFLDSVTIGNSQASNAAQGTGVKVIKRKVFLDDSQNEAAIRQQFTR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPSTIKVLQQMLPQLPS-DIVLVKPSALLN 239
>gi|317494739|ref|ZP_07953151.1| divergent polysaccharide deacetylase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917341|gb|EFV38688.1| divergent polysaccharide deacetylase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 305
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 4/231 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
++A ++AIV+ G + + I +P I++A +A +G+E +
Sbjct: 18 AASAYAGKLAIVIDDFGY-RPQEENKILQMPLAISVAVLPTAPHAREMATKAHAQGREIL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E D TL+ + + ++ + ++ G+ N+ G+++ SN +
Sbjct: 77 IHLPMAPISKQPLEKD--TLQPSMSEAEIQRIIHQAVNSVPYAVGMNNHMGSLMTSNLQG 134
Query: 285 AEVIFKEFAKRG-LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + L F D + + + + + ++LDD + IR++
Sbjct: 135 MQKVMRTLEQYHFLYFLDSMTIGNSQVTNASAGTGIKVIKRRVFLDDSQNEASIRQQFNR 194
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+IAR G AI + ++ V+ Q L V V P S L S P
Sbjct: 195 AIQIARKNGSAIAIGHPHPSTVRVLQQMLPSLPADIVLVRPSSLLNGASVP 245
>gi|146309788|ref|YP_001174862.1| protein of unknown function DUF610, YibQ [Enterobacter sp. 638]
gi|145316664|gb|ABP58811.1| protein of unknown function DUF610, YibQ [Enterobacter sp. 638]
Length = 314
Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats.
Identities = 43/228 (18%), Positives = 91/228 (39%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S ++AIV+ G + + + +P I++A N +A G E
Sbjct: 16 ALASPVYAGKLAIVIDDFGY-RPHNENQVLAMPTAISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R + + G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIRDAYGKVPFAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + + + + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSMTIGNSQALRASQGTGVKVIKRKVFLDDTQNDADIRAQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G AI + ++ V+ Q L D+++V S L
Sbjct: 193 RAVQLARRNGSAIAIGHPHPSTVRVLQQMLPTLPS-DITLVRPSDLLN 239
>gi|238764340|ref|ZP_04625291.1| hypothetical protein ykris0001_18390 [Yersinia kristensenii ATCC
33638]
gi|238697491|gb|EEP90257.1| hypothetical protein ykris0001_18390 [Yersinia kristensenii ATCC
33638]
Length = 336
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANAVQAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAKEMAIKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEVQRIIRQAVSNVPYATGMNNHMGSAMTSSFP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQALEHYQLYFLDSMTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVRPSALLN 239
>gi|290477275|ref|YP_003470196.1| hypothetical protein XBJ1_4335 [Xenorhabdus bovienii SS-2004]
gi|289176629|emb|CBJ83438.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 335
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 99/233 (42%), Gaps = 5/233 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F NA AR+AIV+ G + I +P +++A + ++A K+G+E
Sbjct: 28 FTLNAHAARLAIVIDDFGYRVHHENK-ILQMPTAVSIAILPDSPHGREMAQKAHKQGREI 86
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E TL + + +++ + ++++ G+ N+ G+ + S+
Sbjct: 87 LIHLPMAPLSKQPLEK--NTLHPSMSREEIGRIIHDAIQKVPHAMGMNNHMGSAMTSSLN 144
Query: 284 SAEVIFKEFAK-RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + + + L F D + + A + + ++LD+ + R +L
Sbjct: 145 GMENVMQVLSSYHHLYFLDSVTIGKTQVTKAAMGTPVQVLRRHVFLDNVQTEAETRHQLN 204
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+AR G AI + + ++ + Q L D+ +V S L +S S
Sbjct: 205 RAIALARKQGSAIAIGHPYPTTVRALQQALTALP-DDIELVTPSRLLNPTSAS 256
>gi|332159700|ref|YP_004296277.1| hypothetical protein YE105_C0076 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325663930|gb|ADZ40574.1| hypothetical protein YE105_C0076 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861126|emb|CBX71390.1| uncharacterized protein yibQ [Yersinia enterocolitica W22703]
Length = 334
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANTSLAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAKEMAIKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQTLEHYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVKASALLN 239
>gi|51594416|ref|YP_068607.1| hypothetical protein YPTB0058 [Yersinia pseudotuberculosis IP
32953]
gi|153950008|ref|YP_001399074.1| divergent polysaccharide deacetylase [Yersinia pseudotuberculosis
IP 31758]
gi|170026350|ref|YP_001722855.1| hypothetical protein YPK_4143 [Yersinia pseudotuberculosis YPIII]
gi|186893404|ref|YP_001870516.1| hypothetical protein YPTS_0060 [Yersinia pseudotuberculosis PB1/+]
gi|51587698|emb|CAH19298.1| HYPOTHETICAL 30.7 KD PROTEIN IN SECB-TDH INTERGENIC REGION
[Yersinia pseudotuberculosis IP 32953]
gi|152961503|gb|ABS48964.1| Divergent polysaccharide deacetylase [Yersinia pseudotuberculosis
IP 31758]
gi|169752884|gb|ACA70402.1| protein of unknown function DUF610 YibQ [Yersinia
pseudotuberculosis YPIII]
gi|186696430|gb|ACC87059.1| protein of unknown function DUF610 YibQ [Yersinia
pseudotuberculosis PB1/+]
Length = 336
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 95/232 (40%), Gaps = 4/232 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A +++IV+ G + I +P I++A N +A +G+E
Sbjct: 17 IASTAQAGKLSIVIDDFGYRPQNENK-ILQMPLPISVAILPNAPYAREMATKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R + G+ N+ G+ + ++
Sbjct: 76 LIHLPMAPQSKQPLERD--TLQPSMSSEEIQRIIRQAANNVPYAKGMNNHMGSAMTASLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQKVMQALGSYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKIFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+AR G AI + +I+V+ Q L Q D+ +V S L S
Sbjct: 194 AVALARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVRPSALLNEPVQS 244
>gi|291327262|ref|ZP_06127547.2| polysaccharide deacetylase family protein [Providencia rettgeri DSM
1131]
gi|291311023|gb|EFE51476.1| polysaccharide deacetylase family protein [Providencia rettgeri DSM
1131]
Length = 338
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
C S A++AIV+ G + I L +T+A + ++A ++G++
Sbjct: 2 MCLPVSAAKLAIVIDDFGY-RVKEDNQILALSPAVTIAILPSSPHGREVAEKAHQQGRDI 60
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+ + E D TL + + +++ ++ ++ R G+ N+ G+ + SN
Sbjct: 61 LIHMPMKPLSKQPLEKD--TLVPSMSAEEIDRIIKNAITRVPYAKGMNNHMGSEMTSNLV 118
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + +K L F D + A + +P + +++D+ ++ R +L
Sbjct: 119 GMRNVMQSLSKSNLFFLDSVTIGNTQAGNAAKEYGVPSLRRHIFIDNHQSEEETRTQLNK 178
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AR G A+ + ++ + ++L Q DV +V +S L S
Sbjct: 179 AVAYARKHGSAVAIGHPHPSTVRALQKYLAQLPA-DVELVAVSALLSPQS 227
>gi|90020140|ref|YP_525967.1| hypothetical protein Sde_0491 [Saccharophagus degradans 2-40]
gi|89949740|gb|ABD79755.1| protein of unknown function DUF610, YibQ [Saccharophagus degradans
2-40]
Length = 382
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 75/358 (20%), Positives = 141/358 (39%), Gaps = 29/358 (8%)
Query: 37 IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK 96
IV L+ + + G E + + + +P ++ +
Sbjct: 40 IVMLACIFALFQSCNGGNQETKNNTQLTQT---SENLPAEKTERPRTEQTPPLITAKP-- 94
Query: 97 NDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE 156
+ T N+P + +++ P IE ++AK V TE
Sbjct: 95 -AEPGEPSESIGHTQTHTAENEPAAAKAVEDEPAIE-----------VIAKPAVPVNITE 142
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
S + RIAI++ +G + I LP +T AF R + A
Sbjct: 143 --------QSTVTSPRIAIIIDDIGYRFDEGRELIE-LPYPLTFAFIPFSPYGARLAELA 193
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
K+ + +L PM +ES E +L T +L+ L L GV N+ G+
Sbjct: 194 KQLNKPVMLHAPMATLNESKWEA---SLNPTMARTELIASLDAMLADIPHVTGVNNHGGS 250
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ ++ES + + + A+R L F D ++ +++ + A ++N+P+ D++LD++ D
Sbjct: 251 LFTQSRESMQWLSEALAERELFFVDSRTTAQSVAKEEAQRVNIPFNERDVFLDNERDLPA 310
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
I +L L IA G+A+ + + E+++ + L + V VV + L P
Sbjct: 311 IDSQLDKLVAIALKHGEAVAIGHPYPETLQALKARLPLLAAQGVEVVGIELLLNRHRP 368
>gi|253991822|ref|YP_003043178.1| hypothetical protein PAU_04350 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783272|emb|CAQ86437.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 301
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 4/226 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F S +R+AIV+ G + I +P I++A + ++A K+ +E
Sbjct: 17 FSLQTSASRLAIVIDDFGYRPHNESK-ILQMPVAISIAILPDSPYGREMAEKAYKQRREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ T + +++ ++ ++++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQRLEPD--TLQPTMSSEEIDRIIQQAIQKVPYAVGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ L F D + + A + + +++LDD + R +L
Sbjct: 134 GMQKVMHSLSRYRLYFLDSVTIGNSQATKAAKGTPVRVIRRNVFLDDVQSEAETRYQLNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
IAR G AI + +I + + L D+ +V S L
Sbjct: 194 AISIARKNGSAIAIGHPHPTTIRALQKMLPTLPA-DIELVSPSMLL 238
>gi|157373053|ref|YP_001481042.1| hypothetical protein Spro_4821 [Serratia proteamaculans 568]
gi|157324817|gb|ABV43914.1| protein of unknown function DUF610 YibQ [Serratia proteamaculans
568]
Length = 318
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 98/229 (42%), Gaps = 4/229 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ +G + + A+ +P I++A N A +G+E ++ +
Sbjct: 21 AQAGKLSIVIDDVGY-RPHEEGAVLQMPTAISVAVLPNAPHAHLMATRAHSQGREVLIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 80 PMAPLSKQPLERD--TLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPAMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D + + A ++ + ++LDD + IR + E+
Sbjct: 138 VMQALDSYQLYFLDSMTIGNSQATRAAAGTHVKVIKRKVFLDDTANEADIRRQFNRAVEL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AR G AI + ++ V+ Q L D+ +V S L SS
Sbjct: 198 ARRNGSAIAIGHPRPATVRVLQQMLPTLPA-DIVLVKPSSLLNEPQGSS 245
>gi|318603800|emb|CBY25298.1| putative divergent polysaccharide deacetylase [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 334
Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 95/227 (41%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANTSLAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAKEMAIKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYATGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + I ++
Sbjct: 134 GMQKVMQTLEHYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKVFLDDSQNEAAIHQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIVLVKASALLN 239
>gi|212712560|ref|ZP_03320688.1| hypothetical protein PROVALCAL_03655 [Providencia alcalifaciens DSM
30120]
gi|212684776|gb|EEB44304.1| hypothetical protein PROVALCAL_03655 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S A++AIV+ G + I LP I++A N A ++G++ ++ +
Sbjct: 22 VSAAKLAIVIDDFGY-RVKEDNQILALPVAISIAILPNSPHGAEVAATAYQQGRDILIHM 80
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + E D TL + + +++ ++ ++ R G+ N+ G+ + S+
Sbjct: 81 PMKPLSKQPLEKD--TLAPSMSAEEVDRIIKNAISRVPHAKGMNNHMGSEMTSSLSGMRN 138
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + ++ L F D + A + +P ++++D+ ++ R +L
Sbjct: 139 VMRSLSQSNLFFLDSVTIGNTQAVNAAKEFGVPSAKRNIFIDNHQSEEETRTQLNKAIAY 198
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AR G A+ + ++ + +++ Q D+ +VP+S L S
Sbjct: 199 ARKHGSAVAIGHPHPSTVRALQKFIPQVPA-DIELVPVSTLVNHQS 243
>gi|238783976|ref|ZP_04627992.1| hypothetical protein yberc0001_4960 [Yersinia bercovieri ATCC
43970]
gi|238715084|gb|EEQ07080.1| hypothetical protein yberc0001_4960 [Yersinia bercovieri ATCC
43970]
Length = 342
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A +++IV+ G + + +P I++A N +A +G+E
Sbjct: 17 IANAAQAGKLSIVIDDFGYRPQNENKVLQ-MPLPISVAILPNAPYAREMAVKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLERD--TLQPSMSSEEIQRIIRQAVNNVPYAKGMNNHMGSAMTSSLP 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD + IR++
Sbjct: 134 GMQRVMQALEHYQLYFLDSVTIGNSQASRAAEGTGVKVIKRKVFLDDSQNEAAIRQQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+AR G AI + +I+V+ Q L Q D+ +V S L
Sbjct: 194 AVELARRNGSAIAIGHPHPATIKVLQQMLPQLPS-DIVLVKPSALLN 239
>gi|146291148|ref|YP_001181572.1| hypothetical protein Sputcn32_0037 [Shewanella putrefaciens CN-32]
gi|145562838|gb|ABP73773.1| protein of unknown function DUF610, YibQ [Shewanella putrefaciens
CN-32]
gi|319428503|gb|ADV56577.1| protein of unknown function DUF610 YibQ [Shewanella putrefaciens
200]
Length = 247
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + + +IA+++ +G Q T A+ LP +TL+ + + K +KG E
Sbjct: 13 YVAPSYATKIALIIDDIGYRQ--TDEAVLSLPHTVTLSVLPHTPLGENLAKVGHRKGHEI 70
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PMQA + L ++ + ++ G N+ G++L
Sbjct: 71 MLHLPMQAINGKAL--GPGGLTKGMDEAEIRANVSSAIANIPFAKGANNHMGSLLTQLDS 128
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D ++P + A +L +P + L+LD+ V + + ++
Sbjct: 129 HMLWVMECLKQNQLYFVDSMTTPFSKAGEKADQLGIPSLKRQLFLDNNVSKKALEKQFNL 188
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
+ A G + +A + E+I + L + +VP+S L +
Sbjct: 189 MISNAHMQGSLVVIAHPYPETIRFLQANLPLLEAEGIDLVPVSDLLPI 236
>gi|71278442|ref|YP_271042.1| hypothetical protein CPS_4393 [Colwellia psychrerythraea 34H]
gi|71144182|gb|AAZ24655.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 259
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 4/230 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ S A ++AIV+ +G T + LP IT AF + + +A +
Sbjct: 23 SVQSIAQANQVAIVIDDMGYRY--TDKHALTLPGAITYAFLPHTTYGKKLAMQANSTNHD 80
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ IPM++ + L Q L S G+ N+ G+ L
Sbjct: 81 VLIHIPMESENRKKL--GPGALTSNMDEQAFSQSLTKSFAEIPFAIGINNHMGSYLTQLY 138
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + L F D +SP + + A +P ++LD+++ I ++ K
Sbjct: 139 QPMAWTMTFLKQHDLFFLDSKTSPHSQAQQAAIDFGVPVKARHIFLDNELTEKYISQQFK 198
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
L A+ AI +A E++ +++ + + + +VPLS L S
Sbjct: 199 QLIHFAQKHQTAIAIAHPHPETVATLNKLIPTLKLHGIELVPLSRLYPTS 248
>gi|296100521|ref|YP_003610667.1| hypothetical protein ECL_00150 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295054980|gb|ADF59718.1| hypothetical protein ECL_00150 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 310
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 91/232 (39%), Gaps = 4/232 (1%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A + ++AIV+ G + + +PA I++A N +A
Sbjct: 12 ASALALVAPVYAGKLAIVIDDFGYRPHYENQVLA-MPAAISVAVLPNAPHAREMATKAHN 70
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G + ++ +PM + E D TL+ + ++ +R + + G+ N+ G+ +
Sbjct: 71 SGHQVLIHLPMAPISKQPLEKD--TLRPEMSSDEIDRIIRDAYNKVPYAVGLNNHMGSAM 128
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
S+ + + + L F D + + A + + ++LDD + IR
Sbjct: 129 TSSLYGMLKVMQALERYNLYFLDSMTIGNSQAMRAAQGTGVKVIKRKVFLDDTQNEADIR 188
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ ++AR G AI + ++ V+ Q L D+++V S L
Sbjct: 189 VQFNRAVQLARRNGSAIAIGHPHPSTVRVLQQMLPTLPS-DITLVRPSDLLN 239
>gi|282600473|ref|ZP_05974435.2| YibQ protein [Providencia rustigianii DSM 4541]
gi|282565189|gb|EFB70724.1| YibQ protein [Providencia rustigianii DSM 4541]
Length = 364
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 102/227 (44%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
CS AS A++AIV+ G + I +PA I++A N +A ++G++
Sbjct: 35 ICSQASAAKLAIVIDDFGY-RAKEDNQILAMPAAISIAILPNSPHGIEVATQAYQQGRDI 93
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+ + E D TL + + + + ++ ++ R G+ N+ G+ + S+
Sbjct: 94 LIHMPMKPLSKQPLEKD--TLTPSMSAEDVDRIIKNAISRVPHAKGMNNHMGSEMTSSLS 151
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ L F D + + A + +P ++++D+ ++ R +L
Sbjct: 152 GMRNVMRSLSQSNLFFLDSVTIGNTQAQNAAKEFGVPSTKRNIFIDNHQSEEETRAQLNK 211
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G A+ + ++ + +++ DV +VP+S L
Sbjct: 212 AISYARKHGSAVAIGHPHPSTVRALQKFIP-LIPADVELVPVSTLVN 257
>gi|120600823|ref|YP_965397.1| hypothetical protein Sputw3181_4041 [Shewanella sp. W3-18-1]
gi|120560916|gb|ABM26843.1| protein of unknown function DUF610, YibQ [Shewanella sp. W3-18-1]
Length = 247
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ + + A+IA+++ +G Q T A+ LP +TL+ + + K KG E
Sbjct: 13 YVAPSYAAKIALIIDDIGYRQ--TDEAVLSLPHTVTLSVLPHTPLGENLAKVGHSKGHEI 70
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PMQA + L ++ + ++ G N+ G++L
Sbjct: 71 MLHLPMQAINGKAL--GPGGLTKGMDEAEIRANVSSAIANIPFAKGANNHMGSLLTQLDS 128
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D ++P + A +L +P + L+LD+ V + + ++
Sbjct: 129 HMLWVMECLKQNQLYFVDSMTTPFSKAGEKADQLGIPSLKRQLFLDNNVSKKALEKQFNL 188
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
+ A G + +A + E+I + L + +VP+S L +
Sbjct: 189 MISNAHMQGSLVVIAHPYPETIRFLQANLPLLEAEGIDLVPVSDLLPI 236
>gi|26250262|ref|NP_756302.1| hypothetical protein c4440 [Escherichia coli CFT073]
gi|91213132|ref|YP_543118.1| hypothetical protein UTI89_C4159 [Escherichia coli UTI89]
gi|218560689|ref|YP_002393602.1| polysaccharide deacetylase [Escherichia coli S88]
gi|227883784|ref|ZP_04001589.1| divergent polysaccharide deacetylase [Escherichia coli 83972]
gi|237703387|ref|ZP_04533868.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300984983|ref|ZP_07177235.1| divergent polysaccharide deacetylase [Escherichia coli MS 45-1]
gi|301047406|ref|ZP_07194486.1| divergent polysaccharide deacetylase [Escherichia coli MS 185-1]
gi|26110691|gb|AAN82876.1|AE016768_294 Hypothetical protein yibQ precursor [Escherichia coli CFT073]
gi|91074706|gb|ABE09587.1| hypothetical protein YibQ precursor [Escherichia coli UTI89]
gi|218367458|emb|CAR05240.1| putative polysaccharide deacetylase [Escherichia coli S88]
gi|226902651|gb|EEH88910.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227839062|gb|EEJ49528.1| divergent polysaccharide deacetylase [Escherichia coli 83972]
gi|294494032|gb|ADE92788.1| polysaccharide deacetylase family protein [Escherichia coli
IHE3034]
gi|300300680|gb|EFJ57065.1| divergent polysaccharide deacetylase [Escherichia coli MS 185-1]
gi|300408263|gb|EFJ91801.1| divergent polysaccharide deacetylase [Escherichia coli MS 45-1]
gi|307555716|gb|ADN48491.1| hypothetical protein YibQ precursor [Escherichia coli ABU 83972]
gi|307628691|gb|ADN72995.1| putative polysaccharide deacetylase [Escherichia coli UM146]
gi|315285352|gb|EFU44797.1| divergent polysaccharide deacetylase [Escherichia coli MS 110-3]
gi|315292992|gb|EFU52344.1| divergent polysaccharide deacetylase [Escherichia coli MS 153-1]
gi|323949856|gb|EGB45740.1| divergent polysaccharide deacetylase [Escherichia coli H252]
gi|323954843|gb|EGB50623.1| divergent polysaccharide deacetylase [Escherichia coli H263]
Length = 319
Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRMQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|322835022|ref|YP_004215049.1| hypothetical protein Rahaq_4336 [Rahnella sp. Y9602]
gi|321170223|gb|ADW75922.1| protein of unknown function DUF610 YibQ [Rahnella sp. Y9602]
Length = 309
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A+++I++ G Q + + +P +++A N M +A ++G+E
Sbjct: 17 FACQVQAAKLSILIDDFGYRQ-HEENQVLQMPKAVSVAIFPNAPDSQMMMNKAHQQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL + + ++ + ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLEKD--TLTPSMSAAEVKRIVDQAIINIPYAIGINNHMGSAMTSSLT 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
E + + L F D + + A + + +++LDD + +IR + +
Sbjct: 134 GMENVMQAMNAHNLFFLDSMTIGNTQSVKAAQGTRVKVIKRNVFLDDVQNEAEIRRQFER 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G AI + +++V+ Q L D+ +V S L
Sbjct: 194 AIQLARKNGYAIAIGHPHPTTVKVLQQMLPNLPS-DIVLVRPSDLLN 239
>gi|300939215|ref|ZP_07153896.1| divergent polysaccharide deacetylase [Escherichia coli MS 21-1]
gi|300455896|gb|EFK19389.1| divergent polysaccharide deacetylase [Escherichia coli MS 21-1]
Length = 319
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 89/226 (39%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|320193877|gb|EFW68510.1| putative divergent polysaccharide deacetylase [Escherichia coli
WV_060327]
Length = 319
Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRMQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|218707251|ref|YP_002414770.1| putative polysaccharide deacetylase [Escherichia coli UMN026]
gi|293407240|ref|ZP_06651164.1| yibQ protein [Escherichia coli FVEC1412]
gi|298382986|ref|ZP_06992581.1| yibQ protein [Escherichia coli FVEC1302]
gi|300898550|ref|ZP_07116882.1| divergent polysaccharide deacetylase [Escherichia coli MS 198-1]
gi|218434348|emb|CAR15272.1| putative polysaccharide deacetylase [Escherichia coli UMN026]
gi|284923650|emb|CBG36747.1| putative polysaccharide deacetylase [Escherichia coli 042]
gi|291426051|gb|EFE99085.1| yibQ protein [Escherichia coli FVEC1412]
gi|298276822|gb|EFI18340.1| yibQ protein [Escherichia coli FVEC1302]
gi|300357770|gb|EFJ73640.1| divergent polysaccharide deacetylase [Escherichia coli MS 198-1]
Length = 319
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|331685279|ref|ZP_08385865.1| YibQ protein product [Escherichia coli H299]
gi|331077650|gb|EGI48862.1| YibQ protein product [Escherichia coli H299]
Length = 319
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|293413051|ref|ZP_06655719.1| yibQ protein [Escherichia coli B354]
gi|331675098|ref|ZP_08375855.1| YibQ protein product [Escherichia coli TA280]
gi|291468698|gb|EFF11191.1| yibQ protein [Escherichia coli B354]
gi|331068007|gb|EGI39405.1| YibQ protein product [Escherichia coli TA280]
Length = 319
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|256021379|ref|ZP_05435244.1| putative polysaccharide deacetylase [Shigella sp. D9]
gi|332282613|ref|ZP_08395026.1| polysaccharide deacetylase [Shigella sp. D9]
gi|332104965|gb|EGJ08311.1| polysaccharide deacetylase [Shigella sp. D9]
Length = 319
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|332996160|gb|EGK15787.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri VA-6]
Length = 319
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|323166902|gb|EFZ52641.1| divergent polysaccharide deacetylase family protein [Shigella
sonnei 53G]
Length = 319
Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPNNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|320644962|gb|EFX13992.1| putative polysaccharide deacetylase [Escherichia coli O157:H- str.
493-89]
gi|320650229|gb|EFX18718.1| putative polysaccharide deacetylase [Escherichia coli O157:H- str.
H 2687]
Length = 319
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|323173207|gb|EFZ58836.1| divergent polysaccharide deacetylase family protein [Escherichia
coli LT-68]
Length = 319
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S ++AIV+ G + + + +P+ I++A + +A G E
Sbjct: 16 ALSSPVLAGKLAIVIDDFGY-RPHNENQVLEMPSAISVAVLPDSPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 193 RAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|297519266|ref|ZP_06937652.1| putative polysaccharide deacetylase [Escherichia coli OP50]
Length = 319
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S A ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPALAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|331659937|ref|ZP_08360875.1| YibQ protein product [Escherichia coli TA206]
gi|331053152|gb|EGI25185.1| YibQ protein product [Escherichia coli TA206]
Length = 319
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 88/228 (38%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S ++AIV+ G + + +P+ I++A + +A G E
Sbjct: 16 ALSSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 193 RAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|168766036|ref|ZP_02791043.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4486]
gi|189364563|gb|EDU82982.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4486]
Length = 319
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|188493391|ref|ZP_03000661.1| divergent polysaccharide deacetylase [Escherichia coli 53638]
gi|218697338|ref|YP_002405005.1| putative polysaccharide deacetylase [Escherichia coli 55989]
gi|293417079|ref|ZP_06659706.1| hypothetical protein ECDG_04229 [Escherichia coli B185]
gi|293463941|ref|ZP_06664355.1| hypothetical protein ECCG_04022 [Escherichia coli B088]
gi|309784406|ref|ZP_07679045.1| divergent polysaccharide deacetylase family protein [Shigella
dysenteriae 1617]
gi|188488590|gb|EDU63693.1| divergent polysaccharide deacetylase [Escherichia coli 53638]
gi|218354070|emb|CAV00606.1| putative polysaccharide deacetylase [Escherichia coli 55989]
gi|291321573|gb|EFE61009.1| hypothetical protein ECCG_04022 [Escherichia coli B088]
gi|291431110|gb|EFF04103.1| hypothetical protein ECDG_04229 [Escherichia coli B185]
gi|308927913|gb|EFP73381.1| divergent polysaccharide deacetylase family protein [Shigella
dysenteriae 1617]
gi|320201358|gb|EFW75939.1| putative divergent polysaccharide deacetylase [Escherichia coli
EC4100B]
gi|323934840|gb|EGB31222.1| divergent polysaccharide deacetylase [Escherichia coli E1520]
gi|324116044|gb|EGC09970.1| divergent polysaccharide deacetylase [Escherichia coli E1167]
Length = 319
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|270265206|ref|ZP_06193468.1| hypothetical protein SOD_l00560 [Serratia odorifera 4Rx13]
gi|270040840|gb|EFA13942.1| hypothetical protein SOD_l00560 [Serratia odorifera 4Rx13]
Length = 321
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ +G + + A+ +P I++A N A +G+E ++ +
Sbjct: 21 AQAGKLSIVIDDVGY-RPHEEGAVLQMPTAISVAVLPNAPHARLMATRAHSQGREVLIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + + +++ +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPLSKQPLERD--TLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D + + A + + ++LDD + IR + ++
Sbjct: 138 VMQALESYRLYFLDSMTIGNSQATRAAAGTGVKVIKRKVFLDDTANEADIRRQFNRAVDL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AR G AI + +++V+ Q L D+ +V S L +S
Sbjct: 198 ARRNGSAIAIGHPRPATVKVLQQMLPTLPA-DIVLVKPSSLLNEPQSNS 245
>gi|331006625|ref|ZP_08329910.1| hypothetical protein IMCC1989_515 [gamma proteobacterium IMCC1989]
gi|330419564|gb|EGG93945.1| hypothetical protein IMCC1989_515 [gamma proteobacterium IMCC1989]
Length = 349
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ LG + +A+ LP IT A + + +EA+K +E +L PM
Sbjct: 111 VAIIIDDLGYNYEQGLKAMQ-LPGAITYAIIPHSPKAQFFAQEAQKHNKEIMLHAPMSTI 169
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ L L SL G+ N+ G++L + + +
Sbjct: 170 NHKPL--GKNGLTGLMEEADFKQVLNQSLLSLPSVKGMNNHMGSLLTQKSQPMSWVMQSL 227
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R L F D +S +++ +A + +P + D++LD + + I ++ K L A+ G
Sbjct: 228 KQRQLYFIDSRTSAQSVAWDIAQQYGIPSLKRDVFLDHEPNEAFIDKQFKLLISTAKHQG 287
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
A+ +A E++ +S L + H +S+VP S LAK SP+
Sbjct: 288 YAVAIAHPHPETVAYLSLNLSRLHDAGISLVPASELAKRFSPN 330
>gi|110643858|ref|YP_671588.1| hypothetical protein ECP_3715 [Escherichia coli 536]
gi|191170375|ref|ZP_03031928.1| polysaccharide deacetylase family protein [Escherichia coli F11]
gi|215488894|ref|YP_002331325.1| predicted polysaccharide deacetylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218691901|ref|YP_002400113.1| putative polysaccharide deacetylase [Escherichia coli ED1a]
gi|218702383|ref|YP_002410012.1| putative polysaccharide deacetylase [Escherichia coli IAI39]
gi|301018946|ref|ZP_07183169.1| divergent polysaccharide deacetylase [Escherichia coli MS 69-1]
gi|306816035|ref|ZP_07450173.1| putative polysaccharide deacetylase [Escherichia coli NC101]
gi|312968044|ref|ZP_07782255.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 2362-75]
gi|331649432|ref|ZP_08350518.1| YibQ protein product [Escherichia coli M605]
gi|331665242|ref|ZP_08366143.1| YibQ protein product [Escherichia coli TA143]
gi|110345450|gb|ABG71687.1| hypothetical protein YibQ precursor [Escherichia coli 536]
gi|190909183|gb|EDV68769.1| polysaccharide deacetylase family protein [Escherichia coli F11]
gi|215266966|emb|CAS11411.1| predicted polysaccharide deacetylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218372369|emb|CAR20243.1| putative polysaccharide deacetylase [Escherichia coli IAI39]
gi|218429465|emb|CAR10430.2| putative polysaccharide deacetylase [Escherichia coli ED1a]
gi|222035325|emb|CAP78070.1| Uncharacterized protein yibQ [Escherichia coli LF82]
gi|300399440|gb|EFJ82978.1| divergent polysaccharide deacetylase [Escherichia coli MS 69-1]
gi|305850431|gb|EFM50888.1| putative polysaccharide deacetylase [Escherichia coli NC101]
gi|312287303|gb|EFR15212.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 2362-75]
gi|312948178|gb|ADR29005.1| putative polysaccharide deacetylase [Escherichia coli O83:H1 str.
NRG 857C]
gi|315297051|gb|EFU56331.1| divergent polysaccharide deacetylase [Escherichia coli MS 16-3]
gi|323189343|gb|EFZ74625.1| divergent polysaccharide deacetylase family protein [Escherichia
coli RN587/1]
gi|324008122|gb|EGB77341.1| divergent polysaccharide deacetylase [Escherichia coli MS 57-2]
gi|324012623|gb|EGB81842.1| divergent polysaccharide deacetylase [Escherichia coli MS 60-1]
gi|330909679|gb|EGH38193.1| putative divergent polysaccharide deacetylase [Escherichia coli
AA86]
gi|331041930|gb|EGI14074.1| YibQ protein product [Escherichia coli M605]
gi|331057752|gb|EGI29738.1| YibQ protein product [Escherichia coli TA143]
Length = 319
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|170683133|ref|YP_001745916.1| polysaccharide deacetylase family protein [Escherichia coli
SMS-3-5]
gi|170520851|gb|ACB19029.1| polysaccharide deacetylase family protein [Escherichia coli
SMS-3-5]
Length = 319
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|194431299|ref|ZP_03063592.1| polysaccharide deacetylase family protein [Shigella dysenteriae
1012]
gi|194420754|gb|EDX36830.1| polysaccharide deacetylase family protein [Shigella dysenteriae
1012]
gi|320179953|gb|EFW54895.1| putative divergent polysaccharide deacetylase [Shigella boydii ATCC
9905]
gi|332084497|gb|EGI89692.1| divergent polysaccharide deacetylase family protein [Shigella
dysenteriae 155-74]
gi|332084797|gb|EGI89980.1| divergent polysaccharide deacetylase family protein [Shigella
boydii 5216-82]
Length = 319
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + A+ L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALARYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|260870347|ref|YP_003236749.1| putative polysaccharide deacetylase [Escherichia coli O111:H- str.
11128]
gi|257766703|dbj|BAI38198.1| predicted polysaccharide deacetylase [Escherichia coli O111:H- str.
11128]
Length = 319
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|294638294|ref|ZP_06716547.1| YibQ protein [Edwardsiella tarda ATCC 23685]
gi|291088547|gb|EFE21108.1| YibQ protein [Edwardsiella tarda ATCC 23685]
Length = 294
Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A ++AIV+ G + ++ + LP IT+A N A +G+E
Sbjct: 1 MAAPAQAGKLAIVIDDFGY-RPHEEKQVLALPLPITIAVLPNAPHAREMALRAHAQGREI 59
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E TL+ T + ++ + ++ G+ N+ G+ + SN
Sbjct: 60 LIHLPMAPLSKQPLER--NTLQPTMSEAEIQRIIHQAVDNVPYAVGMNNHMGSAMTSNLA 117
Query: 284 SAEVIFKEFAKRG-LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + + A + + ++LDD + IR +L
Sbjct: 118 GMQKVMRALEQYHFLYFLDSVTIAHSQVSNAAQGTGVKVIKRKVFLDDAQNESAIRAQLN 177
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
++AR G AI + ++ V+ Q L D+ +V S L S
Sbjct: 178 RAIQLARRNGSAIAIGHPHPTTVRVLQQMLPNLPA-DIVLVKPSALLNES 226
>gi|194435962|ref|ZP_03068065.1| polysaccharide deacetylase family protein [Escherichia coli 101-1]
gi|194425505|gb|EDX41489.1| polysaccharide deacetylase family protein [Escherichia coli 101-1]
Length = 319
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLCPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|320176324|gb|EFW51384.1| putative divergent polysaccharide deacetylase [Shigella dysenteriae
CDC 74-1112]
gi|320186843|gb|EFW61563.1| putative divergent polysaccharide deacetylase [Shigella flexneri
CDC 796-83]
gi|332089546|gb|EGI94650.1| divergent polysaccharide deacetylase family protein [Shigella
boydii 3594-74]
Length = 319
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPLTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|218556179|ref|YP_002389092.1| putative polysaccharide deacetylase [Escherichia coli IAI1]
gi|218362947|emb|CAR00584.1| putative polysaccharide deacetylase [Escherichia coli IAI1]
Length = 319
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRRAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGYTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|261341775|ref|ZP_05969633.1| hypothetical protein ENTCAN_08255 [Enterobacter cancerogenus ATCC
35316]
gi|288316144|gb|EFC55082.1| YibQ protein product [Enterobacter cancerogenus ATCC 35316]
Length = 304
Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 89/224 (39%), Gaps = 4/224 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
++AIV+ G + + +P+ I++A N +A G + ++
Sbjct: 14 PVYAGKLAIVIDDFGYRPHYENQVLA-MPSAISVAVLPNAPHAREMATKAHNSGHQVLIH 72
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM + E D TL+ + ++ +R + + G+ N+ G+ + S+
Sbjct: 73 LPMAPLSKQPLEKD--TLRPEMSSDEIDRIIRDAYNKVPYAVGLNNHMGSAMTSSLYGML 130
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + + L F D + + A + + ++LDD + IR + +
Sbjct: 131 KVMQSLERYNLYFLDSMTIGNSQAMRAAQGTGVKVIKRKVFLDDTQNEADIRVQFNRAVQ 190
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q L D+++V S L
Sbjct: 191 LARRNGSAIAIGHPHPSTVRVLQQMLPTLPA-DITLVRPSDLLN 233
>gi|38704183|ref|NP_312519.2| hypothetical protein ECs4492 [Escherichia coli O157:H7 str. Sakai]
gi|157157521|ref|YP_001465097.1| polysaccharide deacetylase family protein [Escherichia coli
E24377A]
gi|157163098|ref|YP_001460416.1| polysaccharide deacetylase family protein [Escherichia coli HS]
gi|168746834|ref|ZP_02771856.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4113]
gi|168753440|ref|ZP_02778447.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4401]
gi|168759714|ref|ZP_02784721.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4501]
gi|168772418|ref|ZP_02797425.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4196]
gi|168779772|ref|ZP_02804779.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4076]
gi|168785494|ref|ZP_02810501.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC869]
gi|168797460|ref|ZP_02822467.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC508]
gi|170018153|ref|YP_001723107.1| protein of unknown function DUF610 YibQ [Escherichia coli ATCC
8739]
gi|191168137|ref|ZP_03029934.1| polysaccharide deacetylase family protein [Escherichia coli B7A]
gi|193068550|ref|ZP_03049512.1| polysaccharide deacetylase family protein [Escherichia coli
E110019]
gi|208807566|ref|ZP_03249903.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4206]
gi|208814455|ref|ZP_03255784.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4045]
gi|208820448|ref|ZP_03260768.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4042]
gi|209399753|ref|YP_002273096.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4115]
gi|209921088|ref|YP_002295172.1| hypothetical protein ECSE_3897 [Escherichia coli SE11]
gi|217325442|ref|ZP_03441526.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. TW14588]
gi|253771543|ref|YP_003034374.1| hypothetical protein ECBD_0111 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163544|ref|YP_003046652.1| putative polysaccharide deacetylase [Escherichia coli B str.
REL606]
gi|254795572|ref|YP_003080409.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
TW14359]
gi|261224201|ref|ZP_05938482.1| predicted polysaccharide deacetylase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254812|ref|ZP_05947345.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284988|ref|YP_003501806.1| hypothetical protein G2583_4353 [Escherichia coli O55:H7 str.
CB9615]
gi|300815145|ref|ZP_07095370.1| divergent polysaccharide deacetylase [Escherichia coli MS 107-1]
gi|300822387|ref|ZP_07102527.1| divergent polysaccharide deacetylase [Escherichia coli MS 119-7]
gi|300907658|ref|ZP_07125286.1| divergent polysaccharide deacetylase [Escherichia coli MS 84-1]
gi|300919816|ref|ZP_07136291.1| divergent polysaccharide deacetylase [Escherichia coli MS 115-1]
gi|300923401|ref|ZP_07139442.1| divergent polysaccharide deacetylase [Escherichia coli MS 182-1]
gi|300927953|ref|ZP_07143512.1| divergent polysaccharide deacetylase [Escherichia coli MS 187-1]
gi|300948053|ref|ZP_07162192.1| divergent polysaccharide deacetylase [Escherichia coli MS 116-1]
gi|300954492|ref|ZP_07166941.1| divergent polysaccharide deacetylase [Escherichia coli MS 175-1]
gi|301303850|ref|ZP_07209969.1| divergent polysaccharide deacetylase [Escherichia coli MS 124-1]
gi|301325299|ref|ZP_07218806.1| divergent polysaccharide deacetylase [Escherichia coli MS 78-1]
gi|301644280|ref|ZP_07244283.1| divergent polysaccharide deacetylase [Escherichia coli MS 146-1]
gi|307140313|ref|ZP_07499669.1| putative polysaccharide deacetylase [Escherichia coli H736]
gi|307314298|ref|ZP_07593906.1| protein of unknown function DUF610 YibQ [Escherichia coli W]
gi|309797485|ref|ZP_07691876.1| divergent polysaccharide deacetylase [Escherichia coli MS 145-7]
gi|312972100|ref|ZP_07786274.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1827-70]
gi|331644333|ref|ZP_08345462.1| YibQ protein product [Escherichia coli H736]
gi|331655247|ref|ZP_08356246.1| YibQ protein product [Escherichia coli M718]
gi|331670458|ref|ZP_08371297.1| YibQ protein product [Escherichia coli TA271]
gi|331679708|ref|ZP_08380378.1| YibQ protein product [Escherichia coli H591]
gi|157068778|gb|ABV08033.1| polysaccharide deacetylase family protein [Escherichia coli HS]
gi|157079551|gb|ABV19259.1| polysaccharide deacetylase family protein [Escherichia coli
E24377A]
gi|169753081|gb|ACA75780.1| protein of unknown function DUF610 YibQ [Escherichia coli ATCC
8739]
gi|187771729|gb|EDU35573.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4196]
gi|188018304|gb|EDU56426.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4113]
gi|189002373|gb|EDU71359.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4076]
gi|189358842|gb|EDU77261.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4401]
gi|189369563|gb|EDU87979.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4501]
gi|189374594|gb|EDU93010.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC869]
gi|189380099|gb|EDU98515.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC508]
gi|190901806|gb|EDV61558.1| polysaccharide deacetylase family protein [Escherichia coli B7A]
gi|192958201|gb|EDV88642.1| polysaccharide deacetylase family protein [Escherichia coli
E110019]
gi|208727367|gb|EDZ76968.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4206]
gi|208735732|gb|EDZ84419.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4045]
gi|208740571|gb|EDZ88253.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4042]
gi|209161153|gb|ACI38586.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. EC4115]
gi|209914347|dbj|BAG79421.1| conserved hypothetical protein [Escherichia coli SE11]
gi|217321663|gb|EEC30087.1| polysaccharide deacetylase family protein [Escherichia coli O157:H7
str. TW14588]
gi|242379138|emb|CAQ33940.1| putative nucleoside (IDP) diphosphatase [Escherichia coli
BL21(DE3)]
gi|253322587|gb|ACT27189.1| protein of unknown function DUF610 YibQ [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975445|gb|ACT41116.1| predicted polysaccharide deacetylase [Escherichia coli B str.
REL606]
gi|253979601|gb|ACT45271.1| predicted polysaccharide deacetylase [Escherichia coli BL21(DE3)]
gi|254594972|gb|ACT74333.1| predicted polysaccharide deacetylase [Escherichia coli O157:H7 str.
TW14359]
gi|281602976|gb|ADA75960.1| Polysaccharide deacetylase family protein [Shigella flexneri
2002017]
gi|290764861|gb|ADD58822.1| Uncharacterized protein conserved in bacteria [Escherichia coli
O55:H7 str. CB9615]
gi|300318525|gb|EFJ68309.1| divergent polysaccharide deacetylase [Escherichia coli MS 175-1]
gi|300400594|gb|EFJ84132.1| divergent polysaccharide deacetylase [Escherichia coli MS 84-1]
gi|300413169|gb|EFJ96479.1| divergent polysaccharide deacetylase [Escherichia coli MS 115-1]
gi|300420311|gb|EFK03622.1| divergent polysaccharide deacetylase [Escherichia coli MS 182-1]
gi|300452394|gb|EFK16014.1| divergent polysaccharide deacetylase [Escherichia coli MS 116-1]
gi|300464045|gb|EFK27538.1| divergent polysaccharide deacetylase [Escherichia coli MS 187-1]
gi|300525034|gb|EFK46103.1| divergent polysaccharide deacetylase [Escherichia coli MS 119-7]
gi|300532037|gb|EFK53099.1| divergent polysaccharide deacetylase [Escherichia coli MS 107-1]
gi|300840813|gb|EFK68573.1| divergent polysaccharide deacetylase [Escherichia coli MS 124-1]
gi|300847826|gb|EFK75586.1| divergent polysaccharide deacetylase [Escherichia coli MS 78-1]
gi|301077380|gb|EFK92186.1| divergent polysaccharide deacetylase [Escherichia coli MS 146-1]
gi|306906121|gb|EFN36640.1| protein of unknown function DUF610 YibQ [Escherichia coli W]
gi|308118921|gb|EFO56183.1| divergent polysaccharide deacetylase [Escherichia coli MS 145-7]
gi|310334477|gb|EFQ00682.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1827-70]
gi|315062905|gb|ADT77232.1| predicted polysaccharide deacetylase [Escherichia coli W]
gi|315254003|gb|EFU33971.1| divergent polysaccharide deacetylase [Escherichia coli MS 85-1]
gi|320191332|gb|EFW65982.1| putative divergent polysaccharide deacetylase [Escherichia coli
O157:H7 str. EC1212]
gi|320639523|gb|EFX09131.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
G5101]
gi|320655581|gb|EFX23509.1| putative polysaccharide deacetylase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661315|gb|EFX28739.1| putative polysaccharide deacetylase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666329|gb|EFX33328.1| putative polysaccharide deacetylase [Escherichia coli O157:H7 str.
LSU-61]
gi|323376502|gb|ADX48770.1| protein of unknown function DUF610 YibQ [Escherichia coli KO11]
gi|323939624|gb|EGB35830.1| divergent polysaccharide deacetylase [Escherichia coli E482]
gi|323944070|gb|EGB40150.1| divergent polysaccharide deacetylase [Escherichia coli H120]
gi|323959865|gb|EGB55513.1| divergent polysaccharide deacetylase [Escherichia coli H489]
gi|323971259|gb|EGB66504.1| divergent polysaccharide deacetylase [Escherichia coli TA007]
gi|324019726|gb|EGB88945.1| divergent polysaccharide deacetylase [Escherichia coli MS 117-3]
gi|326337384|gb|EGD61219.1| putative divergent polysaccharide deacetylase [Escherichia coli
O157:H7 str. 1044]
gi|326339909|gb|EGD63716.1| putative divergent polysaccharide deacetylase [Escherichia coli
O157:H7 str. 1125]
gi|331036627|gb|EGI08853.1| YibQ protein product [Escherichia coli H736]
gi|331047262|gb|EGI19340.1| YibQ protein product [Escherichia coli M718]
gi|331062520|gb|EGI34440.1| YibQ protein product [Escherichia coli TA271]
gi|331072880|gb|EGI44205.1| YibQ protein product [Escherichia coli H591]
gi|332749934|gb|EGJ80346.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-671]
gi|332750094|gb|EGJ80505.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 4343-70]
gi|332751254|gb|EGJ81657.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 2747-71]
gi|332764186|gb|EGJ94423.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 2930-71]
gi|332997354|gb|EGK16970.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-218]
gi|333012897|gb|EGK32274.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-304]
Length = 319
Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|323965881|gb|EGB61329.1| divergent polysaccharide deacetylase [Escherichia coli M863]
gi|327250739|gb|EGE62441.1| divergent polysaccharide deacetylase family protein [Escherichia
coli STEC_7v]
Length = 319
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|89110397|ref|AP_004177.1| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. W3110]
gi|90111621|ref|NP_418071.4| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. MG1655]
gi|170083122|ref|YP_001732442.1| polysaccharide deacetylase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902705|ref|YP_002928501.1| putative polysaccharide deacetylase [Escherichia coli BW2952]
gi|254038815|ref|ZP_04872867.1| polysaccharide deacetylase [Escherichia sp. 1_1_43]
gi|18545478|sp|P37691|YIBQ_ECOLI RecName: Full=Uncharacterized protein yibQ; Flags: Precursor
gi|85676428|dbj|BAE77678.1| predicted polysaccharide deacetylase [Escherichia coli str. K12
substr. W3110]
gi|87082298|gb|AAC76638.2| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. MG1655]
gi|169890957|gb|ACB04664.1| predicted polysaccharide deacetylase [Escherichia coli str. K-12
substr. DH10B]
gi|226838780|gb|EEH70807.1| polysaccharide deacetylase [Escherichia sp. 1_1_43]
gi|238862835|gb|ACR64833.1| predicted polysaccharide deacetylase [Escherichia coli BW2952]
gi|260447367|gb|ACX37789.1| protein of unknown function DUF610 YibQ [Escherichia coli DH1]
gi|309704018|emb|CBJ03364.1| putative polysaccharide deacetylase [Escherichia coli ETEC H10407]
gi|315138196|dbj|BAJ45355.1| putative polysaccharide deacetylase [Escherichia coli DH1]
Length = 319
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPATVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|187731969|ref|YP_001882314.1| polysaccharide deacetylase family protein [Shigella boydii CDC
3083-94]
gi|187428961|gb|ACD08235.1| polysaccharide deacetylase family protein [Shigella boydii CDC
3083-94]
Length = 319
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPLTVRVLQQMVYNLPP-DITLVKASRLLN 239
>gi|260857988|ref|YP_003231879.1| putative polysaccharide deacetylase [Escherichia coli O26:H11 str.
11368]
gi|257756637|dbj|BAI28139.1| predicted polysaccharide deacetylase [Escherichia coli O26:H11 str.
11368]
gi|323155268|gb|EFZ41451.1| divergent polysaccharide deacetylase family protein [Escherichia
coli EPECa14]
Length = 319
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMRALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|193066089|ref|ZP_03047145.1| polysaccharide deacetylase family protein [Escherichia coli E22]
gi|260846618|ref|YP_003224396.1| putative polysaccharide deacetylase [Escherichia coli O103:H2 str.
12009]
gi|192926251|gb|EDV80889.1| polysaccharide deacetylase family protein [Escherichia coli E22]
gi|257761765|dbj|BAI33262.1| predicted polysaccharide deacetylase [Escherichia coli O103:H2 str.
12009]
gi|323182645|gb|EFZ68048.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1357]
Length = 319
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 88/228 (38%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S ++AIV+ G + + +P+ I++A + +A G E
Sbjct: 16 ALSSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 193 RAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|323975163|gb|EGB70268.1| divergent polysaccharide deacetylase [Escherichia coli TW10509]
Length = 319
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + A+ L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALARYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|194427407|ref|ZP_03059956.1| polysaccharide deacetylase family protein [Escherichia coli B171]
gi|194414447|gb|EDX30720.1| polysaccharide deacetylase family protein [Escherichia coli B171]
gi|323160707|gb|EFZ46644.1| divergent polysaccharide deacetylase family protein [Escherichia
coli E128010]
Length = 319
Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 88/228 (38%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S ++AIV+ G + + +P+ I++A + +A G E
Sbjct: 16 ALSSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 193 RAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|256025655|ref|ZP_05439520.1| predicted polysaccharide deacetylase [Escherichia sp. 4_1_40B]
Length = 319
Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|294143080|ref|YP_003559058.1| hypothetical protein SVI_4309 [Shewanella violacea DSS12]
gi|293329549|dbj|BAJ04280.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 256
Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 4/226 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S + A++AI++ +G + A+ LP NITL+ + A ++G E
Sbjct: 13 ASSYVNAAQVAIIIDDIGYR--HSDEAVLSLPDNITLSVLPHTPLGRSVAHTAHQRGYEV 70
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PMQA + T + + ++ GV N+ G++L E
Sbjct: 71 MLHLPMQALNGKKLGPGGIT--NDMSEIDVKRIIQQDFESIPFAKGVNNHMGSLLTQLDE 128
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ + F D ++ + A KL +P + ++LD+ + + ++ +
Sbjct: 129 PMRWVMESLKQKQVYFVDSMTTRFSKAGSTAEKLGIPQLKRQIFLDNDLSPAALNQQFER 188
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
L +A GQ + +A + E+IE + L + VS+V S L
Sbjct: 189 LIALAHRQGQVVAIAHPYPETIEYLKLNLPRLQQAGVSLVKTSDLL 234
>gi|332345585|gb|AEE58919.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 319
Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPATVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|324111944|gb|EGC05924.1| divergent polysaccharide deacetylase [Escherichia fergusonii B253]
Length = 318
Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|254429372|ref|ZP_05043079.1| Divergent polysaccharide deacetylase superfamily [Alcanivorax sp.
DG881]
gi|196195541|gb|EDX90500.1| Divergent polysaccharide deacetylase superfamily [Alcanivorax sp.
DG881]
Length = 258
Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 5/225 (2%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
RIAI++ LG S+ Q AI LPA +T A R + A G+E ++ +PM
Sbjct: 25 PRIAIIIDDLGYSRQHGQ-AIVDLPAPVTCAVIPFSPHARRLAERASLAGKEVLVHMPMA 83
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
A + L+ QLL+ +R +L + G+ N+ G+ L ++ +
Sbjct: 84 AQRHQTLDQGG--LRDGMDEPQLLDAVRQALSQIPQARGLNNHMGSALTEQQQPMGWLMT 141
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E L F D +S ++ + +A ++ L + D++LD++ + I E+ L +AR
Sbjct: 142 ELKAHQLFFVDSRTSSHSVAQQMARQVGLSHAGRDVFLDNERNLVSINEQFNRLIRLARQ 201
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
GQAI + + E++ + Q L + VVP+S L LS+P+
Sbjct: 202 RGQAIAIGHPYPETVHYLQQVLPLMQDAGIEVVPVSTL--LSTPA 244
>gi|301028373|ref|ZP_07191620.1| divergent polysaccharide deacetylase [Escherichia coli MS 196-1]
gi|299878575|gb|EFI86786.1| divergent polysaccharide deacetylase [Escherichia coli MS 196-1]
Length = 319
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKGIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|238921665|ref|YP_002935180.1| hypothetical protein NT01EI_3821 [Edwardsiella ictaluri 93-146]
gi|238871234|gb|ACR70945.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 312
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 5/229 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A ++AIV+ G + + + +P +T+A N + A +G+E
Sbjct: 16 ALTAPAQAGKLAIVIDDFGY-RPREENKVLEMPLPVTIAVLPNAPHAREMAQRAHAQGRE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ T + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 ILIHLPMAPLSKQPLERD--TLQPTMSEAEIQRIIRQAVGNVPYAVGMNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRG-LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + + L F D + + A + + ++LDD IR +L
Sbjct: 133 TGMQKVMRALEQYHFLYFLDSMTISHSQVSNAAQGTGIRVIKRKVFLDDTQSESAIRTQL 192
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q L D+++V S L
Sbjct: 193 NRAITLARRNGSAIAIGHPHPATVRVLQQMLHTLPP-DITLVRPSTLLN 240
>gi|110835138|ref|YP_693997.1| hypothetical protein ABO_2277 [Alcanivorax borkumensis SK2]
gi|110648249|emb|CAL17725.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 259
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ S + RIAI++ LG S+ Q AI LPA + A R + A G+E
Sbjct: 18 SSVSGLAAPRIAIIIDDLGYSRQQGQ-AIIDLPAPVACAVIPFSPHGRRLAERASLAGKE 76
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + L+ QLL +R +L + G+ N+ G+ L
Sbjct: 77 VLVHMPMATQGHQKLDRGG--LQNGMDEPQLLEAVRQALGQIPQARGLNNHMGSALTEQP 134
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ + E L F D +S + + +A ++ LP D++LD+ + I ++
Sbjct: 135 QTMGWLMAELKAHQLFFVDSRTSSHTVAQQVAQQVGLPNARRDVFLDNNRNPVSINQQFN 194
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
L +AR GQAI + + E++ + Q L + VVP+S L LS+P+
Sbjct: 195 RLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSL--LSTPA 245
>gi|119475541|ref|ZP_01615894.1| hypothetical protein GP2143_17016 [marine gamma proteobacterium
HTCC2143]
gi|119451744|gb|EAW32977.1| hypothetical protein GP2143_17016 [marine gamma proteobacterium
HTCC2143]
Length = 282
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 3/224 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + A I ++V +G S QRAIN LP I AF A ++ +E
Sbjct: 31 FGQEKTVANIVLIVDDMGNSLELGQRAIN-LPGAINYAFLPYSPHRVSLANIAFRQRKEV 89
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L PM L + QQ L L +L GV N+ G+++ ++
Sbjct: 90 MLHAPMSNLHSHPVGQGG--LTPNMSQQQFLQTLNTNLNSVPHVRGVNNHMGSLMTQLRQ 147
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ ++ L F D ++P + + A KL +P + D++LD++ D I + +
Sbjct: 148 PMGWLMAALKQQNLYFVDSRTTPLTVAKSTATKLGVPSLRRDIFLDNERQHDAIAMQFER 207
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
L +A+ TG A+G+ E+++ + + L R + +V S
Sbjct: 208 LIALAKKTGIAVGIGHPHPETLKYLEKTLPTLEQRGIKLVLASQ 251
>gi|281180660|dbj|BAI56990.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 319
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNGSTIAIGHPHPSTVRVLQQLVYNLPP-DITLVKASSLLN 239
>gi|227328077|ref|ZP_03832101.1| hypothetical protein PcarcW_12385 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 315
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 4/223 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++IV+ G + + I +P I++A N +A ++G+E ++ +PM
Sbjct: 24 GKLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHLPMA 82
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ E D TL+ + ++ +R S+ G+ N+ G+ + ++ + + +
Sbjct: 83 PMSKQPLERD--TLRPDMSSDEIQRIIRQSVNNVPYAVGLNNHMGSAMTASLPGMQKVMQ 140
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ L F D + + + A N+ + ++LDD + +IR++ +IAR
Sbjct: 141 ALSAYQLYFLDSMTIGSSQSSQAAAGTNVKVIKRKVFLDDSQNEAEIRKQFTRAVQIARR 200
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+G AI + +I V+ Q L D+ +V S L +
Sbjct: 201 SGSAIAIGHPHPSTIRVLQQMLPTLDA-DIVLVRPSQLLNEPT 242
>gi|37528651|ref|NP_931996.1| hypothetical protein plu4842 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36788090|emb|CAE17214.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 271
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 4/221 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
AR+AIV+ G + I +P I++A + ++A K+G+E ++ +P
Sbjct: 28 GAARLAIVIDDFGYRPHNENK-ILQMPVAISIAILPDSPHGREMAEKAYKQGREILIHLP 86
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M + E D TL+ T + + + ++ ++++ G+ N+ G+ + S+ + +
Sbjct: 87 MAPLSKQLLEPD--TLQPTMSSEDIDRIIQRAIQKVPYAVGINNHMGSAMTSSLPGMQKV 144
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ + L F D + A + + +++LDD + R +L IA
Sbjct: 145 MRSLSGYNLYFLDSVTIGNTQATKAAQGTPVRVIRRNVFLDDVQSEAETRHQLNRAISIA 204
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
R G AI + +I + Q L D+ +V S L
Sbjct: 205 RKNGSAIAIGHPHSTTIRALQQMLPTLPA-DIELVSPSRLL 244
>gi|304398998|ref|ZP_07380867.1| protein of unknown function DUF610 YibQ [Pantoea sp. aB]
gi|304353458|gb|EFM17836.1| protein of unknown function DUF610 YibQ [Pantoea sp. aB]
Length = 300
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 4/241 (1%)
Query: 152 REDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDR 211
R V FCS A +++IV+ +G + + +P I++A N
Sbjct: 4 RRKLPVLMSALLFCSAAQAGKLSIVIDDVGYRPAEENKVLQ-MPQAISVAVLPNAPHARE 62
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
+A + G E ++ +PM + E D TL + +++ +R ++ G+
Sbjct: 63 MAIKAHQGGHEVLIHLPMAPLSKQPLEKD--TLTPEMSSEEVARIMRNAVNNVPYAVGLN 120
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ + S+ + + + L F D + + A + + ++LDD
Sbjct: 121 NHMGSRMTSSLPGMQKVMQALNHYNLYFLDSMTIANSQAIPAAQGTQVKVLKRRVFLDDS 180
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
D + IR++ ++A+ G AI + ++ V+ Q L D+++V S L
Sbjct: 181 QDINAIRQQFSRAVKLAQRDGYAIAIGHPHPNTVRVLQQMLPTLPA-DITLVRPSELLNE 239
Query: 392 S 392
S
Sbjct: 240 S 240
>gi|308188636|ref|YP_003932767.1| hypothetical protein Pvag_3176 [Pantoea vagans C9-1]
gi|308059146|gb|ADO11318.1| Uncharacterized protein yibQ precursor [Pantoea vagans C9-1]
Length = 300
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 46/229 (20%), Positives = 95/229 (41%), Gaps = 4/229 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++AIV+ +G + + +P I++A N +A + G E
Sbjct: 16 FSYAAQAGKLAIVIDDVGYRPAEENKVLQ-MPQAISVAVLPNAPHAHEMATKAHQSGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL + +++ +R ++ G+ N+ G+ + S+
Sbjct: 75 LIHLPMAPLSKQPLEKD--TLTPEMSSEEVTRIMRNAVNNVPYAVGLNNHMGSRMTSSLP 132
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D + + A + + ++LDD D + IR++
Sbjct: 133 GMQKVMQALNHYNLYFLDSMTIANSQAIPAAQGTQVKVLKRRVFLDDSQDINAIRQQFSR 192
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
++A+ G AI + ++ V+ Q L D+++V S L S
Sbjct: 193 AVKLAQRDGYAIAIGHPHPTTVRVLQQMLPTLPA-DITLVRPSQLLNES 240
>gi|77359329|ref|YP_338904.1| hypothetical protein PSHAa0363 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874240|emb|CAI85461.1| conserved protein of unknown function ; putative signal peptide
[Pseudoalteromonas haloplanktis TAC125]
Length = 246
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
NA +IAIV+ +G Q + + LP ++ + + + A K +E
Sbjct: 14 ASLNAKAKQIAIVIDDIGYHQRDLE--LLTLPGQVSYSILPHTPYAQAFATLASKTNKEL 71
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L IPMQA + E L + +Q+ L +L GV N+ G+ L +
Sbjct: 72 LLHIPMQALNGK--ELGPGALTLNMNKEQIQQILGTALASLPQVKGVNNHMGSALTQQSQ 129
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ I + KR L F D ++ + + A L + + ++LD+ ++++ +L
Sbjct: 130 AMRWIMEVLKKRHLYFLDSRTTELSQAQNAANFLGVENIGRHIFLDNITTPEQLQLRLDE 189
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
L++ A AI +A + E+I + L Q + +VP+S L +
Sbjct: 190 LKQHATEHKFAIAIAHPYPETIAFLRHVLPQLSKQGFELVPVSKLVERK 238
>gi|332997808|gb|EGK17419.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-272]
gi|333013340|gb|EGK32712.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri K-227]
Length = 319
Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARHNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|91795046|ref|YP_564697.1| protein of unknown function DUF610, YibQ [Shewanella denitrificans
OS217]
gi|91717048|gb|ABE56974.1| protein of unknown function DUF610, YibQ [Shewanella denitrificans
OS217]
Length = 245
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 4/226 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F GA++AI++ +G Q T A+ LP ITL+ + + ++ KKG E
Sbjct: 2 FIQPVFGAKLAIIIDDIGYRQ--TDEAVLSLPNTITLSVLPHTPLGQKLAQDGHKKGHEI 59
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PMQA + E L T Q+ +L ++ G N+ G++L ++
Sbjct: 60 MLHLPMQALNGK--ELGPGGLTNVMTEGQIKQQLHSAVSSIPFAKGANNHMGSLLTQMQD 117
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D ++ A L +P + ++LD+ + ++ +
Sbjct: 118 PMRWVMESLKQNNLYFVDSMTTRFTKATASAQSLGVPTLKRQIFLDNDISEAALQRQFNL 177
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ A+ Q I +A E+I + L + + +V S L
Sbjct: 178 IMVKAKQEQQVIAIAHPHPETIRFLKANLARLEQAGIELVHTSHLL 223
>gi|218550892|ref|YP_002384683.1| polysaccharide deacetylase [Escherichia fergusonii ATCC 35469]
gi|218358433|emb|CAQ91080.1| putative polysaccharide deacetylase [Escherichia fergusonii ATCC
35469]
gi|325499163|gb|EGC97022.1| polysaccharide deacetylase [Escherichia fergusonii ECD227]
Length = 318
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 87/221 (39%), Gaps = 4/221 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + + +P+ I++A + +A G E ++ +PM
Sbjct: 23 AGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPM 81
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E TL+ + ++ +R ++ G+ N+ G+ + SN + +
Sbjct: 82 APLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVM 139
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + L F D + A + + ++LDD + IR + ++AR
Sbjct: 140 QALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLAR 199
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G I + ++ V+ Q + D+++V S L
Sbjct: 200 RNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|89094931|ref|ZP_01167862.1| hypothetical protein MED92_00710 [Oceanospirillum sp. MED92]
gi|89080797|gb|EAR60038.1| hypothetical protein MED92_00710 [Oceanospirillum sp. MED92]
Length = 277
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 3/228 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ +AIV+ +G ++ AI LP IT AF + K A G+E IL
Sbjct: 25 SHQPVMAIVIDDIGDNRKKGLAAIE-LPGAITYAFLPHTPHSFELAKTAHFLGKEVILHA 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ +++ L +L + L L G+ N+ G++L ++E
Sbjct: 84 PME--NKAGLRLGPGALTHRHNTAELQHILGDGLDSIPYAVGMNNHMGSLLTEDREKMRD 141
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I + +R + F D ++ + + +A + +PY+V D++LD++ + I + K +
Sbjct: 142 IMRVVKQRNMFFLDSMTTSKTVAWKVAHEYGIPYLVRDVFLDNRQEWGYIHNQFKQAVSL 201
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
A T G A+ + + E++E +S+ L + +V S L + S S
Sbjct: 202 AVTQGHAVVIGHPYPETVEYLSEALPILEQLGIRLVTASELLAIRSRS 249
>gi|56459342|ref|YP_154623.1| hypothetical protein IL0231 [Idiomarina loihiensis L2TR]
gi|56178352|gb|AAV81074.1| Conserved protein [Idiomarina loihiensis L2TR]
Length = 251
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A ++IAIV+ +G ++ + A+ LP NI+ A + + ++ +L
Sbjct: 16 TPAYASKIAIVIDDIGNNKNDLKAAL--LPGNISFAVLPYTPYARAFALRGHHQKKQILL 73
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM+A + N + Q+ +L +L GV N+ G+ L
Sbjct: 74 HMPMEAVEN--NRPGPGVVTADMNNAQIKLQLVDALDSIPYVTGVNNHMGSKLTQLHMPM 131
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + + A R L F D +S ++ +A + + ++LD+QVD ++++ + L
Sbjct: 132 QAVMETLASRKLFFIDSRTSEFSVAEQMAGEFGVRTSHRHVFLDNQVDEPYLQQQFEQLL 191
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
IA+ GQAIG+ + E++ + + L Q + + +V +S L +++
Sbjct: 192 SIAKRQGQAIGIGHPYPETLSFLQKQLPQLQEQGIELVFVSELTTVAN 239
>gi|304392603|ref|ZP_07374543.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303295233|gb|EFL89593.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 408
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 124/407 (30%), Positives = 190/407 (46%), Gaps = 17/407 (4%)
Query: 3 IDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGT----ISEMI 58
DL+ P+ PK KS + ++ +VG ++ + G+ ++E
Sbjct: 2 SDLHKPIGVD-PKSKSGGIGAVPVSIWLMVAALILVGSFTWLYLEGRDDGSQVVAVNEAG 60
Query: 59 PYSVIREIAPIPL-TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ----NDISGK 113
S AP + P + P + + N + + S ++ G
Sbjct: 61 QTSQTTAPAPATDQSTPSDNGGDDVPVEPKFDADGNIIIDLSKTKRLSPLEPLPDEPDGT 120
Query: 114 TVVNKPTRSTSIDSLPTIEE-RLILGLSKKELLAKNKVGR-----EDTEVPAMDKNFCSN 167
+ KP + P I+ R + + L ++ GR D P + S
Sbjct: 121 STPAKPQIAFQPRQNPAIQSARRNPWMPVPDNLEPSEFGRLPKVSGDGTRPLDIHSASSG 180
Query: 168 ASGA-RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A GA RIA+V+ GLG+SQTGTQ AI LP ITLAF+ GNSL RWM+ A+++G E LQ
Sbjct: 181 AVGANRIALVLGGLGLSQTGTQEAIKRLPEGITLAFSPQGNSLQRWMQAARREGHEVALQ 240
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM+ TL + L LR+SL R T Y V+NY GA +LSN+ + E
Sbjct: 241 LPMEPLGYPTVNPGPQTLNSKVSKGANLKSLRWSLGRMTNYPVVINYLGAGMLSNRPALE 300
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
I +E RGL DDG+ + A ++ LP A + +D D D+IR +L+ LE
Sbjct: 301 PILQELRARGLGIVDDGTVQSSNLVTYANEMRLPNAKASIIIDRVRDADRIRAQLQTLEA 360
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+AR G I A AF +++E++ +W + + R + +VPLS L + S
Sbjct: 361 VARQQGNVIATATAFPQTVEIVEEWAKTLNQRGILLVPLSNLVRDYS 407
>gi|163792328|ref|ZP_02186305.1| hypothetical protein BAL199_15813 [alpha proteobacterium BAL199]
gi|159182033|gb|EDP66542.1| hypothetical protein BAL199_15813 [alpha proteobacterium BAL199]
Length = 418
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 89/389 (22%), Positives = 167/389 (42%), Gaps = 9/389 (2%)
Query: 8 PLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIA 67
PL KR + S R+G L+ V I + A VG + + R++
Sbjct: 26 PLDDAPAKRPAAASDG--RIGRLLIGIATGVLAVAVIGGTGALVGWLLVNAETTESRQVL 83
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
P + + ++P+ ++ ++ DG + + T + +
Sbjct: 84 RRPQLTVPVLAEGETPTANSSDGGQPVTAGPHTEKDGHAGSAATNSPAPTGDTAAPAPVP 143
Query: 128 LPTIEERLILGLSKKELLA-----KNKVGREDTEVP--AMDKNFCSNASGARIAIVVSGL 180
+ + L LL K + D P + F + S R+AIV+ G+
Sbjct: 144 EVVSVDGVRLAAVDPTLLETKDSAKLPIIGPDGRQPWSTYARPFNLDDSRPRVAIVMIGV 203
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
G + T++A LLP I+L+F+ +++ M A++ G E ++ +PM+ D ++
Sbjct: 204 GFGKDITEKATTLLPGAISLSFSPYVRNIEALMARARQAGHETLIDLPMEPLDFPRDDPG 263
Query: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
TL + ++ LNRL + L R GY GV + G+ + +++ + + +RGL+F
Sbjct: 264 PSTLLTSLSLVDNLNRLEWVLGRAPGYVGVTTWMGSQFTTVEDALMPVLQGLRQRGLMFV 323
Query: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
D +S R++ LA + LP + ++D I L LE AR A+G+A
Sbjct: 324 DSRASSRSIATELASSIQLPRAFNNTFIDQTPSAGTIDRALASLEATARQQRYAVGIARP 383
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+IE +S+W + +++ P+S +A
Sbjct: 384 LPVTIERLSRWAGTLEGKGIALAPISAIA 412
>gi|170767013|ref|ZP_02901466.1| polysaccharide deacetylase family protein [Escherichia albertii
TW07627]
gi|170124451|gb|EDS93382.1| polysaccharide deacetylase family protein [Escherichia albertii
TW07627]
Length = 319
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ ++AIV+ G + + +P+ I++A + +A G E
Sbjct: 16 ALSTPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 75 VLIHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + A+ L F D + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALARYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR G I + ++ V+ Q + D+++V S L
Sbjct: 193 RAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|311277460|ref|YP_003939691.1| hypothetical protein Entcl_0129 [Enterobacter cloacae SCF1]
gi|308746655|gb|ADO46407.1| protein of unknown function DUF610 YibQ [Enterobacter cloacae SCF1]
Length = 313
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A ++AIV+ +G + + LP NI++A N +A G+E
Sbjct: 16 AVSAPAWAGKLAIVIDDVGYRPQQENQVLA-LPVNISVAVLPNAPHAREMATKAHNGGRE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ + G+ N+ G+ + SN
Sbjct: 75 VLIHMPMAPLSKQPLEKD--TLRPDMSSDEIERIIRDAVSKVPYAVGMNNHMGSAMTSNL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + ++ L F D + + A + + ++LDD + IR +
Sbjct: 133 FGMQKVMQALSRYNLYFLDSMTIGNSQATRAAAGTGVKVIKRKVFLDDTQNEADIRFQFN 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR TG AI + ++ V+ Q + D+++V S L
Sbjct: 193 RAIQLARRTGSAIAIGHPHPSTVRVLQQMVYNLPP-DITLVRPSSLLN 239
>gi|77919271|ref|YP_357086.1| hypothetical protein Pcar_1672 [Pelobacter carbinolicus DSM 2380]
gi|77545354|gb|ABA88916.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 395
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 71/402 (17%), Positives = 155/402 (38%), Gaps = 18/402 (4%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M+ RK+ P++K L L +V L + + + + +
Sbjct: 1 MATKKKTVRRKRQPRKKQPDRTFKVLLASLFLVGFLVVSLVLLTFVQRPPLPNRTPEVSP 60
Query: 61 SVIREIAPIPLT------IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
V ++ T + IE +++ ++ + + D + + G+
Sbjct: 61 PVAKQPPDSADTRDQVLRTSVQIEIERALWRQGISFTGMDVVTDDHVMHYHLPSVYPGQA 120
Query: 115 -----VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
V +S+ + ++ +S + + + PA +
Sbjct: 121 WYDGLVRALEKQSSRLKFAFADAPAPLVRVSVNGIPSFALHFKRSRSKPAKVRP------ 174
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
ARIAIVV L R + + ++T+A + + A + G+E ++ +PM
Sbjct: 175 KARIAIVVDDL-GRDLRMLRRLLAIDLDLTMAVMPEEPHTLQSAELAHRAGREVLVHMPM 233
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ N L + Q ++ R+ G N+ G+ E +++F
Sbjct: 234 EPESYPRNNPGPGALLLGQDRLEIERRVTRMFENVPHAVGGNNHMGSRFTQYAEGLQIVF 293
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ K GL F D +SP ++ + A + +P + D++LD+ + D I +++ ++AR
Sbjct: 294 EVMKKNGLFFVDSRTSPGSVAFLEARRARIPAVSRDIFLDNSQNVDAIARQIREAVKMAR 353
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
+ G+ + + + +++E + Q +DV VVP+S L +
Sbjct: 354 SRGKVVAICHPYPQTVEALQQEAAFLRQQDVEVVPVSRLLRH 395
>gi|253690446|ref|YP_003019636.1| hypothetical protein PC1_4085 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251757024|gb|ACT15100.1| protein of unknown function DUF610 YibQ [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 315
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 97/222 (43%), Gaps = 4/222 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G + + I +P I++A N +A ++G+E ++ +PM
Sbjct: 25 KLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHLPMAP 83
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + ++ +R S+ G+ N+ G+ + ++ + + +
Sbjct: 84 MSKQPLERD--TLRPDMSSDEIQRIIRQSVNNVPHAVGLNNHMGSAMTASLPGMQKVMQA 141
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+ L F D + + + A + + ++LDD + +IR++ +IAR +
Sbjct: 142 LSAYQLYFLDSMTIGSSQSSQAAAGTGVKVIKRKVFLDDSQNEAEIRKQFTRAVQIARRS 201
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
G AI + +I V+ Q L D+ +V S L +
Sbjct: 202 GSAIAIGHPHPSTIRVLQQMLPTLDA-DIVLVRPSQLLNEPT 242
>gi|288959172|ref|YP_003449513.1| hypothetical protein AZL_023310 [Azospirillum sp. B510]
gi|288911480|dbj|BAI72969.1| hypothetical protein AZL_023310 [Azospirillum sp. B510]
Length = 391
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 88/375 (23%), Positives = 149/375 (39%), Gaps = 22/375 (5%)
Query: 18 SFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNI 77
L L GL ++ ++ S IAP+P
Sbjct: 38 PRKPPSKPLLAAVALVAAIYAGLGGWLALNGDATREAWRASIPSTTVAIAPLPPPPAPEP 97
Query: 78 EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLIL 137
+ T L + + ++ +P L+
Sbjct: 98 KAAAPAVPPPLPTDAAPLPLPGA--------------------PAAAVTLVPAPVPGLVE 137
Query: 138 GLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
L + GR+ +V A + F + R+AIV+S LG+S T A+ LP
Sbjct: 138 DSRNGPLPRIAQDGRKPWQVYA--RPFPATDKRPRVAIVMSDLGLSGVTTGNALAKLPPG 195
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
ITLAF LD W++ A+ KG E +L +PM+ ++ L + + RL
Sbjct: 196 ITLAFLPYAERLDDWVERARTKGHEVMLSLPMEPLTYPRDDPGPNALLTMLGPDRNIERL 255
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
+SL + GY GV + G +N + + + RGLL D +P+++ LA
Sbjct: 256 EWSLGKAVGYVGVTSTTGGKFTANPTAMQPVIDALKARGLLLVDSRVNPKSVAGPLAMLA 315
Query: 318 NLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHV 377
+P + D +D + R I ++L+ LEE+ART G A+G A + +IE ++ WL
Sbjct: 316 GVPRALGDRVIDRDLSRGAIDDQLRELEELARTNGAAVGFASPYPTTIERLNLWLTALAD 375
Query: 378 RDVSVVPLSCLAKLS 392
R +++ P+S + +
Sbjct: 376 RGIALAPVSAVVNIQ 390
>gi|227114297|ref|ZP_03827953.1| hypothetical protein PcarbP_15088 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 315
Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++IV+ G + + I +P I++A N +A ++G+E ++ +PM
Sbjct: 24 GKLSIVIDDFGY-RPHNENQILAMPTAISIAVLPNAPYAREMATKAHQQGREVLIHLPMA 82
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ E D TL+ + +++ +R S+ G+ N+ G+ + ++ + + +
Sbjct: 83 PMSKQPLERD--TLRPDMSSEEIQRIIRQSVNNVPYAVGLNNHMGSAMTASLPGMQKVMQ 140
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ L F D + + + A N+ + ++LDD + +IR++ +IAR
Sbjct: 141 ALSAYQLYFLDSMTIGSSQSSQAAAGTNVKVIKRKVFLDDSQNEAEIRKQFTRAVQIARR 200
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+G AI + +I V+ Q L D+ +V S L + S
Sbjct: 201 SGSAIAIGHPHPSTIRVLQQMLPTLDT-DIVLVRPSQLLNEPTRQS 245
>gi|217971260|ref|YP_002356011.1| hypothetical protein Sbal223_0044 [Shewanella baltica OS223]
gi|217496395|gb|ACK44588.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS223]
Length = 251
Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +L
Sbjct: 15 SQSHAAQIALIIDDIGYR--HTDQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L T T Q+ + ++ G N+ G++L E
Sbjct: 73 HLPMQALNGKALGLGG--LTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDEPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ L F D ++ A +L +P + L+LD+ + + +
Sbjct: 131 LWVMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDTSTKALERQFNLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A T G + +A + E++ + LQ+ + +VP S L +
Sbjct: 191 SQAHTQGSLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPI 236
>gi|315618682|gb|EFU99268.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 3431]
Length = 319
Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGYRPHNENQVLA-MPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + + L F D + A + + ++LDD + IR +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA 194
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++AR I + ++ V+ Q + D+++V S L
Sbjct: 195 IDLARRNSSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 239
>gi|258406280|ref|YP_003199022.1| hypothetical protein Dret_2160 [Desulfohalobium retbaense DSM 5692]
gi|257798507|gb|ACV69444.1| protein of unknown function DUF610 YibQ [Desulfohalobium retbaense
DSM 5692]
Length = 403
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 160 MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
DK + S AR+AIV+ LG +R I +T A + A +
Sbjct: 172 QDKAEQNTKSQARLAIVIDDLGEDVRKARRLIQTG-LPLTFAVLPSCTHTRDIASLAHEH 230
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
E +L PM+ + + L V Q+ L+ +L + G+ N+ G+
Sbjct: 231 NLELLLHQPMEPLSYPATDPGTGALFVGMNASQIRKTLKDNLAQIQHAVGLNNHMGSRFT 290
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
S+ F+ A R L F D +SP ++ R A + ++PY+ +++LD+ +R+ I
Sbjct: 291 SSSAGMRTTFRNIANRQLFFLDSLTSPDSVARETAKRTHVPYLRRNIFLDNTQNREAILY 350
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+L+ E +A + G AI + ++ ++E I++W Q R V ++PLS L
Sbjct: 351 QLQKAERLALSRGSAIAIGHPYEATLEAIAKWKTQRDPR-VRLIPLSTLL 399
>gi|50119129|ref|YP_048296.1| hypothetical protein ECA0169 [Pectobacterium atrosepticum SCRI1043]
gi|49609655|emb|CAG73088.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
Length = 315
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 98/228 (42%), Gaps = 4/228 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + I +P I++A N +A ++G+E ++ +
Sbjct: 21 ALAGKLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + ++ +R S+ G+ N+ G+ + ++ +
Sbjct: 80 PMAPMSKQPLERD--TLRPDMSSDEIQLIIRQSVSNVPYAVGLNNHMGSAMTASLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + + L F D + + + A + + ++LDD + +IR++ +I
Sbjct: 138 VMQALSAYQLYFLDSMTIGSSQSSQAAAGTGVKVIKRKVFLDDSQNEAEIRKQFTRAVQI 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
AR +G AI + +I V+ Q L D+ +V S L +
Sbjct: 198 ARRSGSAIAIGHPHPSTIRVLQQMLPTLDA-DIVLVRPSQLLNEPTQH 244
>gi|330720619|gb|EGG98878.1| putative divergent polysaccharide deacetylase [gamma
proteobacterium IMCC2047]
Length = 305
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ +S +I I++ LG + QRAI LP +T + + K+A ++ +E
Sbjct: 20 IQAASSSPQITIIIDDLGNNLRNGQRAIA-LPGAVTYSVLPFTPFGKQLAKQAHQQDKEV 78
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PM L Q +L ++ G+ N+ G+ L ++ E
Sbjct: 79 MLHMPMDNSHGHPL--GPGGLTFKQDRPLFEQQLAAAITATPFVSGINNHMGSGLTTSSE 136
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + L F D +S ++ A L +P + D++LD + I ++ K
Sbjct: 137 RMQWLMQSLKNYPLYFVDSRTSANSVAGRTALALKIPTLKRDIFLDHETTPAFIDKQFKR 196
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
L + A + G A+ + + +++ + + L Q V +VP S L L
Sbjct: 197 LLKKAHSKGHAVAIGHPYPSTLDYLEKALPQLDKLGVELVPPSQLLALKR 246
>gi|218782460|ref|YP_002433778.1| hypothetical protein Dalk_4632 [Desulfatibacillum alkenivorans
AK-01]
gi|218763844|gb|ACL06310.1| protein of unknown function DUF610 YibQ [Desulfatibacillum
alkenivorans AK-01]
Length = 359
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+AI++ +G G Q LP IT + + A KG++ +L +PM
Sbjct: 138 RPRVAIIIDDMGYGN-GIQHKFLDLPYVITYSILPHSPDQIEIANLAHDKGRQVLLHLPM 196
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ + TL + T +++ L+ L GV N+ G+ L + IF
Sbjct: 197 EPMQYPEVDPGPGTLLASMTTDTMMDILKEDLAAVPYIAGVNNHMGSRLTMESGALYPIF 256
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
K+GL F D ++ ++ R A LP+ D++LD + ++LK L +A+
Sbjct: 257 TVLKKQGLFFVDSRTTRHSVCRPSARLFQLPFAQRDVFLDHVRTEAFVEKQLKLLVSVAK 316
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
GQAIG+ + + +V++ L V +VP S L ++
Sbjct: 317 KRGQAIGIGHPYKVTYKVLAARLPAVDAE-VRLVPASDLVRV 357
>gi|170729198|ref|YP_001763224.1| hypothetical protein Swoo_4880 [Shewanella woodyi ATCC 51908]
gi|169814545|gb|ACA89129.1| protein of unknown function DUF610 YibQ [Shewanella woodyi ATCC
51908]
Length = 251
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 6/233 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A++AI++ +G Q+ A+ LP NITL+ + A ++G E
Sbjct: 12 ISSFTHAAQVAIIIDDIGYRQS--DEAVLTLPENITLSVLPHTPLGHSVASAAHERGHEI 69
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQA + T + ++ +L ++ + G N+ G++L +E
Sbjct: 70 MVHLPMQALNGKALGPGGLTNTMGES--ELKKSIQSAFLSVPFAKGANNHMGSLLTQLEE 127
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + ++ L F D ++ A +L +P + +L+LD+ + + +
Sbjct: 128 PMLWVMESLKQQDLYFVDSMTTRFTKAGTTADQLGIPQLKRELFLDNDISAAALDRQFSK 187
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA--KLSSP 394
L +A GQ + +A + E+IE + L + + +V S L +L+S
Sbjct: 188 LITLAHNQGQIVAIAHPYPETIEFLKLNLPRLQKAGIKLVKTSELLPYRLASK 240
>gi|304412443|ref|ZP_07394050.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS183]
gi|307305787|ref|ZP_07585533.1| protein of unknown function DUF610 YibQ [Shewanella baltica BA175]
gi|304349278|gb|EFM13689.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS183]
gi|306911280|gb|EFN41706.1| protein of unknown function DUF610 YibQ [Shewanella baltica BA175]
Length = 251
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +L
Sbjct: 15 SQSHAAQIALIIDDIGYR--HTDQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L T T Q+ + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGLGG--LTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ L F D ++ A +L +P + L+LD+ + + + +
Sbjct: 131 LWVMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDISAKALERQFNLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A T G + +A + E++ + LQ+ + +VP S L +
Sbjct: 191 SQAHTQGSLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPI 236
>gi|113968388|ref|YP_732181.1| hypothetical protein Shewmr4_0042 [Shewanella sp. MR-4]
gi|113883072|gb|ABI37124.1| protein of unknown function DUF610, YibQ [Shewanella sp. MR-4]
Length = 251
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
++++ A+IA+++ +G T A+ LP+ +TL+ + ++ K A KG E +L
Sbjct: 15 ASSNAAQIALIIDDIGYR--HTDEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L + Q+ + + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGVGG--LTNNMSEAQIRSSVLAAIASVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ L F D ++ A L++P + L+LD+ V + ++ +
Sbjct: 131 LWVMETLKQKQLYFVDSMTTKFTKAGDKADSLSVPLLRRQLFLDNDVSAAALEKQFNLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A + G + +A + E+I + L + + +VP S L +
Sbjct: 191 SQAHSQGSLVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSLLPI 236
>gi|95928784|ref|ZP_01311530.1| protein of unknown function DUF610, YibQ [Desulfuromonas
acetoxidans DSM 684]
gi|95135129|gb|EAT16782.1| protein of unknown function DUF610, YibQ [Desulfuromonas
acetoxidans DSM 684]
Length = 328
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 4/243 (1%)
Query: 154 DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
D P ++AI++ +GI++ A+ L + LA M
Sbjct: 79 DKPQPPQITP---PDHVPKVAIIMDDIGINRAAALDALQ-LQMPLALAIIPGEAHSTEIM 134
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
A ++ E ++ IPM+ N L V Q+ Q+ R+ + G N+
Sbjct: 135 NLAYQQHSEILIHIPMEPVSYPKNNPGPLGLFVHQSDSQIKRRIDDIITALPYAIGGNNH 194
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ + + + + GL F D +S ++ A KL L + D++LD+
Sbjct: 195 MGSEFTQHADKLRPVLLALKQSGLFFVDSLTSKDSVAYQQAQKLGLSCALRDVFLDNVRQ 254
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ I +L L +A G AI + + ++IE + Q++ DV +VP+S L
Sbjct: 255 VEPILFQLDRLVTLAHRHGSAIAICHPYPQTIEALQQFIADPQRFDVEIVPISQLVHPPV 314
Query: 394 PSS 396
PSS
Sbjct: 315 PSS 317
>gi|114045553|ref|YP_736103.1| hypothetical protein Shewmr7_0040 [Shewanella sp. MR-7]
gi|113886995|gb|ABI41046.1| protein of unknown function DUF610, YibQ [Shewanella sp. MR-7]
Length = 251
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 98/226 (43%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ ++ A+IA+++ +G T A+ LP+ +TL+ + ++ K A KG E +L
Sbjct: 15 APSNAAQIALIIDDIGYR--HTDEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L + Q+ + + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGVGG--LTNNMSETQIRSSVLAAIASVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ L F D ++ A L +P + L+LD+ V + ++ +
Sbjct: 131 LWVMETLKQKQLYFVDSMTTKFTKAGDKADSLGVPLLRRQLFLDNDVSAAALEKQFNLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A + G + +A + E+I + L + + +VP S L +
Sbjct: 191 SQAHSQGSLVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSLLPI 236
>gi|170742352|ref|YP_001771007.1| hypothetical protein M446_4224 [Methylobacterium sp. 4-46]
gi|168196626|gb|ACA18573.1| protein of unknown function DUF610 YibQ [Methylobacterium sp. 4-46]
Length = 396
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/395 (26%), Positives = 168/395 (42%), Gaps = 12/395 (3%)
Query: 5 LNHPL--RKKTPKRKSFYSQIISRLGLF-LLFCTFIVGLSIYILISHAFVGTISEMIPYS 61
L PL R +TP R + I + + ++ ++ ++ +G +
Sbjct: 8 LTRPLGMRDETPSRLARLRAAIPLRAILSAAAAVLVGAVAGFVALTEDPLGGEPHALVTI 67
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
RE P P + + + ++++ S + + +VV +
Sbjct: 68 TRREAPPGPPS------PRPPAPAEAGSRSASEVERASGVAVLRPEGSAVPDSVVIRVPG 121
Query: 122 STSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF---CSNASGARIAIVVS 178
T I P + L L G +V A + A RIA+VV+
Sbjct: 122 PTEIRLAPAPDPALSEKGRYGLLPRLGPDGARAVDVYARPEAPALPSGAAPAGRIALVVT 181
Query: 179 GLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
GLGI TQ A+ LP +TLAFA G + R A++ G E ++Q PM+ FD N+
Sbjct: 182 GLGIGAAVTQDAVTRLPPAVTLAFAPYGADVGRQAARAREAGHEVMVQAPMEPFDYPDND 241
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
TL + +RL + L R G GV+NY GA L + + + I +E RGL
Sbjct: 242 PGPQTLLAGAKPAENADRLGFVLSRIPGAIGVVNYMGARLTAEAGALDPILREIGARGLG 301
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
F DDG+SPR+L + + P AD+ +D D + +L LEE AR G A+G A
Sbjct: 302 FVDDGTSPRSLALDIGRRARAPVARADVVVDAAPLPDAVDRELARLEETARRKGFAMGSA 361
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+A +I+ I++W + R + +VP S +
Sbjct: 362 MALPLTIDRIARWSRDLEARGILLVPASRALRARR 396
>gi|118589439|ref|ZP_01546845.1| hypothetical protein SIAM614_07838 [Stappia aggregata IAM 12614]
gi|118438139|gb|EAV44774.1| hypothetical protein SIAM614_07838 [Stappia aggregata IAM 12614]
Length = 370
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/377 (27%), Positives = 175/377 (46%), Gaps = 14/377 (3%)
Query: 13 TPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLT 72
+R + +G+ + ++I + +G + A +
Sbjct: 2 GKRRLVRLPFGLIGVGIL---SVIVTSTLVWITVVDDPLGGEPVAVLPL----DAIVEGV 54
Query: 73 IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS--GKTVVNKPTRSTSIDSLPT 130
+IE + D + N S G + + N P S SI+
Sbjct: 55 TSQDIEVVEIRPGIDGDLGPNLRPESSKDLLGPRYDMVMRPDGLGPNAPVTSLSINPDSR 114
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRA 190
+ ER G K ++ V D + + F S +IA++V+GLG+S+TGTQ A
Sbjct: 115 VSERSDFGFLPK--ISDAGVRPLDAYSRPVVREFTSI---PKIAVIVTGLGLSETGTQNA 169
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
I LPA+ T A A G LD WM++A+ KG E +LQ+P++ FD N+ +TL V+
Sbjct: 170 ITRLPADTTFALAPYGGDLDVWMQQARTKGHELLLQLPLEPFDFPDNDPGPHTLLVSLRP 229
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++++RL + L R T Y GV+ GA + K S E + ++ RGL+F D+G+S R++
Sbjct: 230 NEMMDRLGFLLTRATNYVGVIPEMGARFTATKPSMEFLLEKLKARGLMFADNGTSSRSIA 289
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
+A + +P+ D+ LD+ D I KL LE +AR G A+ A A ++ + +
Sbjct: 290 DEVAKEKRIPFSGVDVVLDEVPREDDIDAKLLQLESVARARGVAVATASALPVTVRQLEK 349
Query: 371 WLQQEHVRDVSVVPLSC 387
W+Q R + +VP+S
Sbjct: 350 WVQDLEERGLQLVPVSA 366
>gi|126176516|ref|YP_001052665.1| hypothetical protein Sbal_4335 [Shewanella baltica OS155]
gi|125999721|gb|ABN63796.1| protein of unknown function DUF610, YibQ [Shewanella baltica OS155]
Length = 251
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S + A+IA+++ +G T +A+ LP+ +TL+ + + KKG E +L
Sbjct: 15 SQSHAAQIALIIDDIGYR--HTDQAVLALPSTVTLSVLPHTPLGEELANAGHKKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L T T Q+ + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGLGG--LTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
I + ++ L F D ++ A +L +P + L+LD+ + + +
Sbjct: 131 LWIMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDTSAKALERQFNLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A T G + +A + E++ + LQ+ + +VP S L +
Sbjct: 191 SQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPI 236
>gi|117918507|ref|YP_867699.1| hypothetical protein Shewana3_0048 [Shewanella sp. ANA-3]
gi|117610839|gb|ABK46293.1| protein of unknown function DUF610, YibQ [Shewanella sp. ANA-3]
Length = 251
Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ ++ A+IA+++ +G T A+ LP+ +TL+ + ++ K A KG E +L
Sbjct: 15 APSNAAQIALIIDDIGYR--HTDEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L + Q+ + + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGVGG--LTNNMSEAQIRSSVLAAIASVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ ++ L F D ++ A L +P + L+LD+ V + ++ +
Sbjct: 131 LWVMDTLKQKQLYFVDSMTTKFTKAGDKADSLGVPLLRRKLFLDNDVSAAALEKQFNLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A + G + +A + E+I + L + + +VP S L +
Sbjct: 191 SQAHSQGSLVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSLLPI 236
>gi|320539186|ref|ZP_08038857.1| putative polysaccharide deacetylase [Serratia symbiotica str.
Tucson]
gi|320030824|gb|EFW12832.1| putative polysaccharide deacetylase [Serratia symbiotica str.
Tucson]
Length = 278
Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats.
Identities = 44/229 (19%), Positives = 92/229 (40%), Gaps = 4/229 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+++IV+ +G + A+ +P +++A N A + +E ++ +
Sbjct: 21 VQAGKLSIVIDDVGY-HPHEENAVLQMPEAVSVAVLPNAPYARLMATRAHSQNREVLIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM F + E D TL+ + + + +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPFSKQPLEQD--TLQPDMSSENIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + L F D + + A + + ++LDD + IR + +
Sbjct: 138 VMQALTSYRLYFLDSLTISNSQATRAAIGTGVKVIKRKVFLDDTANEADIRHQFNRAVAL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AR G AI + +++V+ Q L D+ +V S L SS
Sbjct: 198 ARRNGSAIAIGHPRPATVKVLQQMLPVLPA-DIVLVKPSSLLNEPQGSS 245
>gi|227354766|ref|ZP_03839183.1| protein of hypothetical function DUF610, YibQ [Proteus mirabilis
ATCC 29906]
gi|227165084|gb|EEI49915.1| protein of hypothetical function DUF610, YibQ [Proteus mirabilis
ATCC 29906]
Length = 304
Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 5/233 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F + A A++AIV+ G + I LP +++A N +A +G+E
Sbjct: 7 FSAPAFSAKLAIVIDDFGY-RKKEDNQILQLPTAVSIAILPNSPHGKEMATKAHAQGREI 65
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TLK + ++ ++ ++ R G+ N+ G+ + S+++
Sbjct: 66 LIHMPMAPISKQPLEKD--TLKPSMDQAEINRIIQNAINRVPYAVGMNNHMGSAMTSDRQ 123
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + K L F D + A +P + ++LD+ + R++L
Sbjct: 124 AMDRVIKALNHSDLYFLDSVTIGNTQAATAAKAAGVPSLRRHVFLDNVQTEAETRQQLNR 183
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+AR G AI + ++ + Q L D+ +V S L SP S
Sbjct: 184 AINLARKNGFAIAIGHPHPSTVRALQQQLPLLPA-DIQLVAPSGLLT-PSPDS 234
>gi|261823559|ref|YP_003261665.1| hypothetical protein Pecwa_4366 [Pectobacterium wasabiae WPP163]
gi|261607572|gb|ACX90058.1| protein of unknown function DUF610 YibQ [Pectobacterium wasabiae
WPP163]
Length = 313
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 98/226 (43%), Gaps = 4/226 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A +++IV+ G + + I +P I++A N +A ++G+E ++ +
Sbjct: 21 ALAGKLSIVIDDFGY-RPHNENQILAMPTAISVAVLPNAPYAREMATKAHQQGREVLIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E D TL+ + ++ +R S+ G+ N+ G+ + ++ +
Sbjct: 80 PMAPMSKQPLERD--TLRPDMSSDEIQRIIRQSVNNVPYAVGLNNHMGSAMTASLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + + L F D + + + A + + ++LDD + +IR++ +I
Sbjct: 138 VMQALSAYQLYFLDSMTIGSSQSSQAAAGTGVKVIKRKVFLDDSQNEAEIRKQFARAVQI 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
AR +G AI + +I V+ Q L D+ +V S L +
Sbjct: 198 ARRSGSAIAIGHPHPSTIRVLQQMLPTLDA-DIVLVRPSQLLNEPT 242
>gi|317050088|ref|YP_004117736.1| hypothetical protein Pat9b_3890 [Pantoea sp. At-9b]
gi|316951705|gb|ADU71180.1| protein of unknown function DUF610 YibQ [Pantoea sp. At-9b]
Length = 301
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 94/226 (41%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+A +++IV+ G + + + +PA I++A N +A + G E +
Sbjct: 17 SLSAHAGKLSIVIDDFGY-RPVEENKVLQMPAAISVAVLPNATYAREMATKAHQSGHEVL 75
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E D TL + ++ + ++ + G+ N+ G+ + S+
Sbjct: 76 IHLPMAPLSKQPLEKD--TLTPEMSSAEIERIIHDAVGKVPYAVGLNNHMGSKMTSSLPG 133
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + F D + + + A ++ + ++LDD + IR++
Sbjct: 134 MQKVMQVLNHYNFYFLDSMTIGNSQSVPAAQGTHVKVLKRRVFLDDSQNDAAIRQQFTRA 193
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++A+ G AI + ++ V+ Q L D+++V S L
Sbjct: 194 VKLAQRDGYAIAIGHPHPNTVRVLQQMLPTLPA-DITLVRPSQLLN 238
>gi|114706555|ref|ZP_01439456.1| hypothetical protein FP2506_12424 [Fulvimarina pelagi HTCC2506]
gi|114537947|gb|EAU41070.1| hypothetical protein FP2506_12424 [Fulvimarina pelagi HTCC2506]
Length = 386
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 124/397 (31%), Positives = 184/397 (46%), Gaps = 19/397 (4%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M + PL+ + + LGL + I LS+Y F
Sbjct: 1 MDAIFSQPLKANARSPRRSLRPTRADLGLGTVAVILIA-LSLYPAW---FDRIDRHPSDA 56
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKR-DNNTVCNQLKNDS----SQHDGQIQNDISGKTV 115
S E+A I I + +K+ D + N+ ++ G
Sbjct: 57 SGTVELAGIDQVATGGISSVRGTAKQIDIDAALNERARRETTELPYQPANMEVRDLGDM- 115
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+I ++ I L + GR +V + + G R+AI
Sbjct: 116 ------RQAISVAHMPDDAFIEDSEYGLLPVRAVDGRRPFDVY---RGASPSRMGPRVAI 166
Query: 176 VVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
VV GLGISQ+GT AI LP+ +TLAFA+NGNSL RWM+EA++ G E +LQ+PM+
Sbjct: 167 VVGGLGISQSGTLSAIRNLPSEVTLAFAANGNSLARWMQEARRGGHELLLQMPMEPVGYP 226
Query: 236 YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR 295
N+ T+ Q + + + SL + T Y GVMNY G L S+ + E A+R
Sbjct: 227 TNDPGDNTVTSEQMNAEDFSSVLASLGQMTNYVGVMNYLGGQLTSDASALHPFMSELARR 286
Query: 296 GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAI 355
GL++ DDGSS R++ LA ++P ADL LDD D +I +L LE+IART G AI
Sbjct: 287 GLMYLDDGSSARSVAVDLAETTSIPAGAADLVLDDVQDAGEISRRLDQLEQIARTRGHAI 346
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
GVA AF+ + VI W+++ R ++V P+S + +
Sbjct: 347 GVASAFETTTSVIGSWIREAERRGITVTPVSSVVRDP 383
>gi|291619436|ref|YP_003522178.1| YibQ [Pantoea ananatis LMG 20103]
gi|291154466|gb|ADD79050.1| YibQ [Pantoea ananatis LMG 20103]
Length = 303
Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 95/223 (42%), Gaps = 4/223 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ A++AIV+ G T + + +P I++A + + +A + G+E ++ +
Sbjct: 21 SQAAKLAIVIDDFGYRPTEENKVLQ-MPQAISVAVLPDAPYARQMAIKAHQGGREVLIHL 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + E TL + ++ +R ++ G+ N+ G+ + S+ +
Sbjct: 80 PMAPLSKQPLEK--NTLTPEMSRAEIDRIIRSAVNNVPYAVGLNNHMGSKMTSSLPGMQK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + + L F D + + + A ++ + ++LDD D + IR++ +
Sbjct: 138 VMQALNQYNLYFLDSMTIGNSQSLQAAQGTHVRVLKRRVFLDDSQDINAIRQQFNRAVTL 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ G AI + ++ V+ Q L D+++V L
Sbjct: 198 AQRDGYAIAIGHPHPNTVRVLQQMLPSLPA-DITLVTPGQLLN 239
>gi|156936214|ref|YP_001440130.1| hypothetical protein ESA_04113 [Cronobacter sakazakii ATCC BAA-894]
gi|156534468|gb|ABU79294.1| hypothetical protein ESA_04113 [Cronobacter sakazakii ATCC BAA-894]
Length = 313
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 89/216 (41%), Gaps = 4/216 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
IV+ G + GT+ + +PA +++A N +A +G + ++ +PM +
Sbjct: 28 IVIDDFGY-RPGTENQVLAMPAEVSVAVLPNAPHAREMATKAHNQGHDVLIHLPMAPLSK 86
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
E D TL+ + ++ +R ++ G+ N+ G+ + S+ + + A
Sbjct: 87 QPLEKD--TLRPDMSADEIARIIREAVNSVPYAIGMNNHMGSAMTSSLPGMQKVMASLAH 144
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
L F D + + A + + ++LDD + IR + +AR G A
Sbjct: 145 YNLFFLDSMTIGNSQAMRAAAGTGVKVIKRKVFLDDTQNDADIRYQFNRAVALARRNGSA 204
Query: 355 IGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
I + ++ V+ Q L D+++V S L
Sbjct: 205 IAIGHPHPSTVRVLQQMLYNLPP-DITLVRASSLLN 239
>gi|284008837|emb|CBA75621.1| exported polysaccharide deacetylase [Arsenophonus nasoniae]
Length = 319
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+ +++AIV+ +G + I LP I++A + ++A ++G+E +
Sbjct: 17 SGQVNASKLAIVIDDIGY-RKKEDNQILALPVAISIAILPDSPYGREMAEKANQQGREIL 75
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM+ + E TL + ++ ++ ++++ G+ N+ G+ + +N +
Sbjct: 76 IHMPMKPISQQPLEK--NTLTPQMSASEIEQKIIAAIKQVPHAKGMNNHMGSAMTANLVA 133
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + L F D + A LP + +++LDD +IR++
Sbjct: 134 MKNVMHVLSHYDLYFLDSVTIANTKVNEAAKFFALPTLRRNVFLDDVKTEAQIRKQFAHA 193
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G +I + + +I+V+ Q L + D+ +V +S L
Sbjct: 194 ISFARKQGSSIVIGHPYPATIQVLHQTLFELPS-DIELVAVSKLLN 238
>gi|308272530|emb|CBX29134.1| hypothetical protein N47_J01150 [uncultured Desulfobacterium sp.]
Length = 301
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 5/279 (1%)
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV-PAMDKNFCSNASGARIA 174
KP L E++ + L K + ++ P K+ N +A
Sbjct: 27 EKKPLPVKIQVPLKIKEQKKKVTLKPPVFEVYPKEEKHYVKIQPIKIKSLKHNL--PDVA 84
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
I++ +G ++ + L A T + + ++ A+KKG+E +L +PM+ +
Sbjct: 85 IIIDDIGYHPDLEKKYLE-LDAAFTFSVLPFSPYKNITIEAARKKGREIMLHLPMEPNEY 143
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
L + + QL++++ + GV N+ G+ + ++ IF
Sbjct: 144 PEISPGPGALLTSMSPDQLISQINEDIDDVPFIKGVNNHMGSKMSASDVQMNQIFSVLKA 203
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
RGL F D + P+ R A L + D+++D + DR+ I+ ++ L +IA G+A
Sbjct: 204 RGLYFIDSKTGPKTYGRESARLFKLTFAERDVFIDHKQDREFIKNQIYELIKIANRHGKA 263
Query: 355 IGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I + + + +V+S+ L + +++VP S + K SS
Sbjct: 264 IAIMHPYPLTYQVVSEMLPYMKKK-MNIVPASAIVKDSS 301
>gi|24371646|ref|NP_715688.1| hypothetical protein SO_0046 [Shewanella oneidensis MR-1]
gi|24345408|gb|AAN53133.1|AE015456_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 251
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 94/228 (41%), Gaps = 4/228 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+ ++ A+IA+++ +G T A+ LP+++TL+ + + K A G E +
Sbjct: 14 VAPSNAAQIALIIDDIGYR--HTDEAVLSLPSSVTLSVLPHTPLSSKLAKAAHANGHEIM 71
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PMQA + L Q+ + + ++ G N+ G++L +
Sbjct: 72 LHLPMQALNGKALGVGG--LTNNMNEAQIRSSVLAAMASVPFAKGANNHMGSLLTQLDDP 129
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + ++ F D ++ A +L +P + L+LD+ V + + +
Sbjct: 130 MLWVMETLKQKQFYFVDSMTTKFTKAGDRADQLGVPLLRRQLFLDNDVSTQALERQFNLM 189
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
A G + +A + E+I + L + + +VP S L +
Sbjct: 190 ISQAHAQGSLVAIAHPYPETIHFLKANLARLKAEGIELVPTSRLLPIK 237
>gi|152998595|ref|YP_001364276.1| hypothetical protein Shew185_0040 [Shewanella baltica OS185]
gi|151363213|gb|ABS06213.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS185]
Length = 251
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +L
Sbjct: 15 SQSHAAQIALIIDDIGYR--HTDQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L T T Q+ + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGLGG--LTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ L F D ++ A +L +P + L+LD+ + + + +
Sbjct: 131 LWVMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDISAKALERQFSLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A+T G + +A + E++ + LQ+ + +VP S L +
Sbjct: 191 SQAQTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPI 236
>gi|78223057|ref|YP_384804.1| hypothetical protein Gmet_1850 [Geobacter metallireducens GS-15]
gi|78194312|gb|ABB32079.1| protein of unknown function DUF610, YibQ [Geobacter metallireducens
GS-15]
Length = 320
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 113/275 (41%), Gaps = 6/275 (2%)
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGRED---TEVPAMDKNF--CSNASGARIAI 175
+ P ++ K V ED T VP + A +AI
Sbjct: 47 KRPEKKPEPPKVVARHKLPPRESAAEKEPVVHEDYTATVVPPPTERHVRPRPAGSGNLAI 106
Query: 176 VVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
++ +G + I+ + +T + + + +EA+++G EA++ +PM+
Sbjct: 107 IIDDMGKGMQEARSIID-IGVPVTFSIIPGLPKVRQVAQEAQRRGIEAMIHLPMEPKGYP 165
Query: 236 YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR 295
+ L ++Q+ +++ R+ + G N+ G+ NKE ++ + ++
Sbjct: 166 ERRLEENGLLLSQSNDEIVVRMNGYFKEVPQAVGANNHMGSAFTENKEKMAIVLRVLKEK 225
Query: 296 GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAI 355
GL F D +S ++ A ++ L ++LD+ D I ++++ IAR G AI
Sbjct: 226 GLFFVDSKTSAISVGESTAREMGLRTASRSVFLDNIQDVGYISKQIRQAASIARKRGSAI 285
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ +I+ ++ L + V++VP S L
Sbjct: 286 AICHPHPATIQALAAELPKLRDEGVTLVPASSLVH 320
>gi|271498745|ref|YP_003331770.1| hypothetical protein Dd586_0167 [Dickeya dadantii Ech586]
gi|270342300|gb|ACZ75065.1| protein of unknown function DUF610 YibQ [Dickeya dadantii Ech586]
Length = 309
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
++A+V+ G + + +P I++A N +A +G+E ++
Sbjct: 19 PVWAGKLALVIDDFGYRPHNENQVLA-MPTAISVAVLPNAPYAREMATKAHAQGREVLIH 77
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM + E D TL+ + +++ LR ++ + G+ N+ G+ + ++ +
Sbjct: 78 LPMAPMSKQPLERD--TLRPDMSSEEIARILRDAVNKVPYAVGLNNHMGSAMTASLPGMQ 135
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + + L F D + + A + + ++LDD + IR + E
Sbjct: 136 KVMQAMSAYHLYFLDSMTIGSSQASQAAAGTGIKVLKRKVFLDDTQNVADIRRQFSRAVE 195
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
IA+ +G AI + +I+V+ Q L D+ +V S L P
Sbjct: 196 IAQRSGYAIAIGHPHPTTIQVLQQMLPTLPA-DIVLVRPSQLLNEPEP 242
>gi|160873170|ref|YP_001552486.1| hypothetical protein Sbal195_0044 [Shewanella baltica OS195]
gi|160858692|gb|ABX47226.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS195]
gi|315265395|gb|ADT92248.1| protein of unknown function DUF610 YibQ [Shewanella baltica OS678]
Length = 251
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S + A+IA+++ +G T +A+ LP+ +TL+ + KKG E +L
Sbjct: 15 SQSHAAQIALIIDDIGYR--HTDQAVLALPSTVTLSVLPHTPLGKELANAGHKKGHEIML 72
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PMQA + L T T Q+ + ++ G N+ G++L +
Sbjct: 73 HLPMQALNGKALGLGG--LTNTMTEVQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPM 130
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + ++ L F D ++ A +L +P + L+LD+ + + + +
Sbjct: 131 LWVMETLKQKHLYFVDSMTTRFTKAGETADQLGVPLLKRQLFLDNDISAKALERQFSLMI 190
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
A T G + +A + E++ + LQ+ + +VP S L +
Sbjct: 191 SEAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPI 236
>gi|119773199|ref|YP_925939.1| hypothetical protein Sama_0057 [Shewanella amazonensis SB2B]
gi|119765699|gb|ABL98269.1| protein of unknown function DUF610, YibQ [Shewanella amazonensis
SB2B]
Length = 250
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 4/223 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A GA++AI++ +G T + LP +ITL+ + + + ++G E +L
Sbjct: 15 TAHGAQLAIIIDDIGYR--HTDEDVLSLPKDITLSVIPSSPLGVKLASKGHQRGHEIMLH 72
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PMQ+ + L Q++ ++ ++ R G N+ G+ML
Sbjct: 73 LPMQSLNARPLGQGG--LTSDMDEQEIKRKVDDAMVRIPFAKGANNHMGSMLTQLDSHML 130
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + L F D ++ + A ++ +P + ++LD+ + + ++ K + E
Sbjct: 131 WVMERLKHNNLYFVDSLTTRYSKAGAKAEQVGVPLLKRHVFLDNDTSKRGLEKQFKLMME 190
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
A G + +A +++ ++ L + +++VP S L
Sbjct: 191 QAHQQGFVVAIAHPHPATVKFLNANLHRLRDEGINLVPTSELL 233
>gi|159795367|pdb|2QV5|A Chain A, Crystal Structure Of Uncharacterized Protein Atu2773 From
Agrobacterium Tumefaciens C58
gi|159795368|pdb|2QV5|B Chain B, Crystal Structure Of Uncharacterized Protein Atu2773 From
Agrobacterium Tumefaciens C58
Length = 261
Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 104/246 (42%), Positives = 145/246 (58%)
Query: 144 LLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA 203
L VG + S A G R+AIVV GLG+SQTG+Q+AI LP +TL FA
Sbjct: 3 LGQLPVVGADGLRPMEQYARPWSGARGTRVAIVVGGLGLSQTGSQKAIRDLPPEVTLGFA 62
Query: 204 SNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRR 263
++GNSL RWM++A+++G E +LQIP++ F TL + ++RL S+ +
Sbjct: 63 ASGNSLQRWMQDARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAK 122
Query: 264 GTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMV 323
T Y GVMNY G L+ + + E + ++ KRGLLF DDGSS ++L+ +A ++ P
Sbjct: 123 ITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGF 182
Query: 324 ADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
AD+ LD +V I KL LE IAR GQAIGVA AFDESI IS+W ++ R + +V
Sbjct: 183 ADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGGRGIEIV 242
Query: 384 PLSCLA 389
+S L
Sbjct: 243 GVSALV 248
>gi|254504290|ref|ZP_05116441.1| Divergent polysaccharide deacetylase family [Labrenzia alexandrii
DFL-11]
gi|222440361|gb|EEE47040.1| Divergent polysaccharide deacetylase family [Labrenzia alexandrii
DFL-11]
Length = 372
Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 102/380 (26%), Positives = 171/380 (45%), Gaps = 20/380 (5%)
Query: 13 TPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV-----IREIA 67
+R + GL + I+IL+ G + I
Sbjct: 2 GKRRLVRLPFGLIGAGLI---SVVLTTALIWILVVDDPYGGEPFAVLPLDEVVEGITSQD 58
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
+ I + D P+ R ++ + P +I+
Sbjct: 59 IEVVEIRPTVGDDLGPNLRQQSSGDYLGPRYE--MIIRPDGLGP-----EAPVTGLAINP 111
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGT 187
P + ER G +++ V D + F S +IA+VV+GLG+S+ GT
Sbjct: 112 DPRVSERSDYGFLP--MVSDAGVRPLDAYARPIQTQFTSI---PKIAVVVTGLGLSEAGT 166
Query: 188 QRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247
Q AI+ LPA++T A A G+ LD WM++A+ KG E +LQ+P++ FD N+ +TL V+
Sbjct: 167 QNAIDSLPADVTFALAPYGSDLDLWMQQARMKGHELLLQLPLEPFDFPDNDPGPHTLLVS 226
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPR 307
+LL+RL + L R T Y GV+ GA S + S + + ++ RGL+F D+G++ R
Sbjct: 227 LQPTELLDRLAFLLTRATNYVGVIGEMGARFSSTRPSMQYLLEKLETRGLMFVDNGTTSR 286
Query: 308 NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV 367
++ +A +L +P+ D+ LD+ I KL LE +AR G A+ A ++
Sbjct: 287 SIADEVAGELRMPFSGVDVVLDEVPRESNIDAKLLQLESVARARGYAVAAGSALPVTVRQ 346
Query: 368 ISQWLQQEHVRDVSVVPLSC 387
+ +W+Q R + +VP+S
Sbjct: 347 LQEWVQDLEQRGLQLVPVSA 366
>gi|242279092|ref|YP_002991221.1| hypothetical protein Desal_1620 [Desulfovibrio salexigens DSM 2638]
gi|242121986|gb|ACS79682.1| protein of unknown function DUF610 YibQ [Desulfovibrio salexigens
DSM 2638]
Length = 418
Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 112/253 (44%), Gaps = 7/253 (2%)
Query: 136 ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLP 195
I G+ + V ++ P + ++AIV+ +G + + L
Sbjct: 169 INGVPTHKFSIFTPVVKKQKPAPVKLDP-----NAPKLAIVIDDMGEDLKLA-KGLAALD 222
Query: 196 ANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLN 255
A IT + N + + + + AKK G E ++ +PMQ + L V ++ +
Sbjct: 223 AKITFSIWPNSSHVKKTIAIAKKSGNEIMVHLPMQPKGYPKVNPGADALLVGMDADKISS 282
Query: 256 RLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAP 315
++ + G G+ N+ G+ N K+ K+ L F D ++P++ R A
Sbjct: 283 ITLAAIAKVPGATGLNNHMGSSFTENYNGMLAALKQLNKKHLFFLDSRTTPKSACRRAAS 342
Query: 316 KLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQE 375
K + + +++LD+ D I+ +L +IAR +GQAI + E+++ I QW+ +
Sbjct: 343 KAGVTFYERNIFLDNVKDVGAIKYQLSKAAKIARKSGQAIAIGHPNHETLKAIRQWVAEN 402
Query: 376 HVRDVSVVPLSCL 388
+ + +VP+S L
Sbjct: 403 KGK-IRIVPVSSL 414
>gi|329296461|ref|ZP_08253797.1| hypothetical protein Pstas_07378 [Plautia stali symbiont]
Length = 301
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 92/227 (40%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++AIV+ G + + +PA I++A N +A + G E
Sbjct: 16 FTFAAHAGKLAIVIDDFGYHPAEENKVLQ-MPAAISVAVLPNAPHARDMATKAHQGGHEV 74
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL + +++ +R + + G+ N+ G+ + S+
Sbjct: 75 LIHLPMAPLSKQPLEKD--TLTPKMSSEEIARIVRDASNKVPYAVGLNNHMGSKMTSSLP 132
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + F D + + + A + + ++LDD + IR +
Sbjct: 133 GMQKVMQVLNHYNYYFLDSMTIGNSQSVPAAQGTQVKVLKRRVFLDDSQNESAIRTQFTR 192
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++A+ G AI + ++ V+ Q L D+++V S L
Sbjct: 193 AVKLAQRDGYAISIGHPHPTTVRVLQQMLPTLPG-DITLVRPSQLLN 238
>gi|261408347|ref|YP_003244588.1| hypothetical protein GYMC10_4558 [Paenibacillus sp. Y412MC10]
gi|261284810|gb|ACX66781.1| protein of unknown function DUF610 YibQ [Paenibacillus sp.
Y412MC10]
Length = 293
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 101/238 (42%), Gaps = 5/238 (2%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
+ ++A+++ G Q GT+ +N LP IT+A + + + A +
Sbjct: 48 SDHSRSVQEKKPNKLAVIIDDFGNDQKGTEEMLN-LPVKITVAVMPFLPTSKKDAEAAHQ 106
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
+G + I+ +PM+ + + + T +++ R+ ++ G+ N+ G+ +
Sbjct: 107 QGHDVIIHMPMEPKQGRSSWLGPGAILSSLTDEEIRKRMEEAIDSVPYAVGINNHMGSKV 166
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++ ++ +RGL F D ++ ++ LA K +P + D++LDD +
Sbjct: 167 TGDERVMSIVLDVCRERGLFFVDSKTNYYSVVGKLAAKKGMPSISNDIFLDDVHTVQHVS 226
Query: 339 EKLKGLEEIARTTGQAIGVAV--AFDE-SIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++L+ + A I + + + + + + + + V V +S L + S
Sbjct: 227 KQLQTAAQHAEERTSCIAIGHVGVYGIRTAKALKGTIPELQKK-VEFVGISDLVREHS 283
>gi|311695899|gb|ADP98772.1| secreted protein containing DUF610, YibQ [marine bacterium HP15]
Length = 271
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
IAI++ +G S +R + L +TLAF D + A K+ +E +L PM
Sbjct: 30 PTIAIIIDDMGHSLVEGER-LANLDQPLTLAFLPYRPHTDSLARLAYKQHKEIMLHAPMA 88
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ L Q + LR +L+ GV N+ G++L + + + K
Sbjct: 89 --NTRNYGLGPGGLTPEMDEQSMATTLRRALQSIPHVQGVNNHMGSLLTQQLQPMDWVMK 146
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E + + F D + ++ +A +P M D++LD + + + + K L + A+
Sbjct: 147 ELFRYPVYFIDSRTIASSVAGDVAAAYRIPTMTRDVFLDHEQTEEFVDRQFKLLIKRAKE 206
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
G AIG+ +++ + + L + + +++ +S L + + +
Sbjct: 207 NGSAIGIGHPHKVTVDYLEKHLPKLDEQGIAIATVSGLWAMRNGN 251
>gi|158522465|ref|YP_001530335.1| protein of unknown function DUF610 YibQ [Desulfococcus oleovorans
Hxd3]
gi|158511291|gb|ABW68258.1| protein of unknown function DUF610 YibQ [Desulfococcus oleovorans
Hxd3]
Length = 315
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 58/308 (18%), Positives = 120/308 (38%), Gaps = 8/308 (2%)
Query: 90 TVCNQLKNDSSQHDGQIQNDISGKTVVNKP-TRSTSIDSLPTIEERLILGLSKKELLAK- 147
T K + G ++G ++ + + + + + ++ A+
Sbjct: 7 TPATARKASAPSTPGHYLKILAGALLLVGILGAAALVGLVFLPDTPPDRTAGQPDVPARR 66
Query: 148 NKVGREDTEVPAMDKNFCSNASGA----RIAIVVSGLGISQTGTQRAINLLPANITLAFA 203
D C A ++AI++ +G + R +N L +T +
Sbjct: 67 PPFEVYPETDRLPDSPPCGPAHAPSARPKVAIIIDDMGYDRALAGRFVN-LGIPLTFSIL 125
Query: 204 SNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRR 263
+ + A++KG E +L +PM+ + L + +L+ R+ +L
Sbjct: 126 PHSPRGREIARTARQKGIEIMLHLPMEPDEYPAVNPGDGVLLTSMGPDELIARMENNLND 185
Query: 264 GTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMV 323
+ GV N+ G+ + ++ +F K GL F D ++P + R A L +P+
Sbjct: 186 ISHVAGVNNHMGSKMTADSARMYQVFSVLKKHGLFFVDSRTTPESQCRPAARLLQVPFAE 245
Query: 324 ADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
D++LD+ D I ++ L +A+ G+A+ + A + + + L + V +V
Sbjct: 246 RDVFLDNDSDVAAIEAQIDRLIAVAKRNGKAVAIGHAHGSTCTALEKHLAALTQQ-VELV 304
Query: 384 PLSCLAKL 391
P S L L
Sbjct: 305 PASHLVCL 312
>gi|329929364|ref|ZP_08283112.1| divergent polysaccharide deacetylase [Paenibacillus sp. HGF5]
gi|328936451|gb|EGG32896.1| divergent polysaccharide deacetylase [Paenibacillus sp. HGF5]
Length = 293
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 100/234 (42%), Gaps = 5/234 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
++A+++ G Q GT+ +N LP IT+A + + + A ++G +
Sbjct: 52 RSAQEKKPNKLAVIIDDFGNDQKGTEEMLN-LPVKITVAVMPFLPTSKKDAEAAHQQGHD 110
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + + T +++ R+ ++ G+ N+ G+ + ++
Sbjct: 111 VIIHMPMEPKQGRSSWLGPGAILSSLTDEEIRKRMEEAIDSVPYAVGINNHMGSKVTGDE 170
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ +RGL F D ++ ++ LA + +P + D++LDD + ++L+
Sbjct: 171 RVMSIVLDVCRERGLFFVDSKTNYYSVVGKLAASMGMPSIANDIFLDDVHTVQHVSKQLQ 230
Query: 343 GLEEIARTTGQAIGVAV--AFDE-SIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ A I + + + E + + + + V V +S L + S
Sbjct: 231 TAAQHAVERTSCIAIGHVGVYGIRTAEALKGTIPELQKK-VEFVGISDLVREHS 283
>gi|260599915|ref|YP_003212486.1| hypothetical protein CTU_41230 [Cronobacter turicensis z3032]
gi|260219092|emb|CBA34447.1| Uncharacterized protein yibQ [Cronobacter turicensis z3032]
Length = 286
Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 88/215 (40%), Gaps = 4/215 (1%)
Query: 176 VVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
V+ G + T+ + +PA +++A N +A +G + ++ +PM +
Sbjct: 2 VIDDFGYRPS-TENQVLAMPAEVSVAVLPNAPHAREMATKAHNQGHDVLIHLPMAPLSKQ 60
Query: 236 YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR 295
E D TL+ + +++ +R ++ G+ N+ G+ + S+ + + A
Sbjct: 61 PLEKD--TLRPDMSSEEIARIIREAVNDVPYAIGMNNHMGSAMTSSLPGMQKVMAALAHY 118
Query: 296 GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAI 355
L F D + + A + + ++LDD + IR + +AR G AI
Sbjct: 119 NLFFLDSMTIGNSQAMRAAAGTGVKVIKRKVFLDDIQNEADIRYQFNRAVALARRNGSAI 178
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ ++ V+ Q L D+++V S L
Sbjct: 179 AIGHPHPSTVRVLQQMLYSLPA-DITLVRASSLLN 212
>gi|116750484|ref|YP_847171.1| hypothetical protein Sfum_3062 [Syntrophobacter fumaroxidans MPOB]
gi|116699548|gb|ABK18736.1| protein of unknown function DUF610, YibQ [Syntrophobacter
fumaroxidans MPOB]
Length = 430
Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats.
Identities = 66/387 (17%), Positives = 137/387 (35%), Gaps = 8/387 (2%)
Query: 14 PKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTI 73
R +S + R L + + + + + GT + + + ++
Sbjct: 38 ATRGKSFSAGMPRSRFLPLLTVWFLAVLALASLLYWNGGTEKPPPKPAANKATSTGQSSV 97
Query: 74 PLNIEDKQSPSKRDNNTVCNQ-LKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIE 132
P + + V + G + P I+ P
Sbjct: 98 PKPRMADPPAKQPEAGPVAGSRTPSPKGGEPGGKEPGTREPARTTAPAGKPLIEPPPPFH 157
Query: 133 ERLILGLSKKELLAKN------KVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTG 186
R I KE K + A A A++AIV+ G +
Sbjct: 158 SRDIPIDQPKEPARKPDSITLSALRPGVPPGTAPPPPSPVPAPVAKVAIVIDDFGQNLEV 217
Query: 187 TQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKV 246
++ ++ +P ++ A N + A +E +L +PM+ + S L
Sbjct: 218 AKKFLS-IPLPLSFAILPNQRHTAEIAELAHAHHREVLLHLPMEPQGYPKMDPGSGALLT 276
Query: 247 TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP 306
+ + +L L +L + GV N+ G+ N S V+ E R L F D ++
Sbjct: 277 SMSRGRLRRTLLAALDSTPYFIGVNNHMGSKFTENTPSMRVVMSELRHRKLFFLDSATTG 336
Query: 307 RNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
++ LA + +P D++LD + + ++ ++ L A+ G A+ + + +++
Sbjct: 337 DSVGFALAREYGIPARKRDIFLDHTLTDEAVQSQVDQLIRKAKIEGTALAIGHPHEVTLK 396
Query: 367 VISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ + + + +V+VVP S L + S
Sbjct: 397 ALIEGVDRFKEENVAVVPSSELMIVPS 423
>gi|149376054|ref|ZP_01893820.1| hypothetical protein MDG893_03710 [Marinobacter algicola DG893]
gi|149359691|gb|EDM48149.1| hypothetical protein MDG893_03710 [Marinobacter algicola DG893]
Length = 269
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
IAI++ +G + +R I L ITLAF R + A +K +E +L PM
Sbjct: 28 PTIAIIIDDMGHNLVEGERLIA-LEQPITLAFLPYRRYTTRLAELAHRKHKEIMLHAPMA 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ L + LR +L+ GV N+ G++L + + +
Sbjct: 87 --NTRNIGLGPGGLNPDMDQNSIATTLRRALQSIPHVQGVNNHMGSLLTQQLQPMDWVMS 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
E + F D + ++ +A +P + D++LD + + + ++ + L + A+
Sbjct: 145 ELDHYPVYFVDSRTIASSIAGEVAAAYRIPTLTRDVFLDHEQTEEFVDQQFELLIKRAKE 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
G AIG+ +++ + + L + + +++ +S + + + +
Sbjct: 205 NGSAIGIGHPHKVTVDYLEKRLPELDEQGIAIATVSGVWAMRNGN 249
>gi|120556079|ref|YP_960430.1| protein of unknown function DUF610, YibQ [Marinobacter aquaeolei
VT8]
gi|120325928|gb|ABM20243.1| protein of unknown function DUF610, YibQ [Marinobacter aquaeolei
VT8]
Length = 272
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 159 AMDKNFCSNASGAR---IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
+ F S + IAI++ +G ++ +R + L +TLAF K
Sbjct: 16 SPVAAFASGPGEPQQPTIAIIIDDMGHNRHEGER-LARLDQPLTLAFLPYRRHTVPLAKL 74
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + +E +L PM + L + LR +L+ GV N+ G
Sbjct: 75 AHAQSKEIMLHAPMA--NTRNFGLGPGGLTPDMDELAIATTLRRALQSIPFVSGVNNHMG 132
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
++L E + + KE + + F D + ++ +A N+P + D++LD + +
Sbjct: 133 SLLTQQLEPMDWVMKELDRYPVYFVDSRTIANSIAGSVADAYNIPSLTRDVFLDHEQTEE 192
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+ ++ K L + AR G AIG+ +++ + + L + +++ +S L + + +
Sbjct: 193 FVDKQFKLLIQTAREKGTAIGIGHPHKVTVDYLEKHLPMLDEQGIAIATVSGLWAMRNGN 252
>gi|293393596|ref|ZP_06637906.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291423931|gb|EFE97150.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 316
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 3/226 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+++IV+ +G + + A+ +P I++A N A +G+E ++ +PM
Sbjct: 24 GKLSIVIDDVGY-RPHEENAVLQMPLAISVAVLPNAPHAHLMATRAHSQGREVLIHMPMA 82
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ E D TL+ + + ++ +R ++ G+ N+ G+ + S+ + + + +
Sbjct: 83 PLSKQPLERD--TLQPSMSSDEVQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPAMQKVMQ 140
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
L F D + + A + + ++LDD IR + E+AR
Sbjct: 141 ALESYNLYFLDSMTIGNSQATRAAAGTGVKVIKRRVFLDDTASEADIRHQFNRAVELARR 200
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AI + +++V+ Q L V V P S L S S
Sbjct: 201 NGSAIAIGHPRPATVKVLRQMLATLPSDIVLVRPSSLLNAPQSGGS 246
>gi|242237635|ref|YP_002985816.1| hypothetical protein Dd703_0176 [Dickeya dadantii Ech703]
gi|242129692|gb|ACS83994.1| protein of unknown function DUF610 YibQ [Dickeya dadantii Ech703]
Length = 319
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 93/224 (41%), Gaps = 4/224 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
++++V+ G + + + +P I++A N +A +G+E ++
Sbjct: 20 PVWAGKLSLVIDDFGY-RPHNENQVLAMPVAISVAVLPNAPYARDMATKAHAQGREVLIH 78
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM + E D TL+ + +++ LR ++ + G+ N+ G+ + ++ +
Sbjct: 79 LPMAPMSKQPLERD--TLRPDMSSEEIARILRDAVGKVPYAVGLNNHMGSAMTASLPGMQ 136
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + L F D + + A + + ++LDD + IR + E
Sbjct: 137 KVMQAMTTYRLYFLDSMTIGSSQASRAAAGTGIRVLKRKVFLDDTQNTADIRRQFNRAVE 196
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + +I+V+ Q L D+ +V S L
Sbjct: 197 LARRDGVAIAIGHPHPTTIQVLQQMLPTLPP-DIELVRPSQLLN 239
>gi|260892757|ref|YP_003238854.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
gi|260864898|gb|ACX52004.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
Length = 476
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 58/295 (19%), Positives = 122/295 (41%), Gaps = 9/295 (3%)
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+++ VV S++ ++ ++ +++ + +PA K
Sbjct: 170 LEHTCMPAVVVEMGYLSSAAEAARLLDPGYQQRIAEALCAGLEAYFAQANSLPAGGK--- 226
Query: 166 SNASGARIAIVVSGL-GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
++ AR+AIV+ G S+ R L +T A N +EA K G E +
Sbjct: 227 LHSPRARVAIVIDDFAGPSEKKGTREFLSLNKPLTFAVLPNYPLSAPTAREAVKAGFEVL 286
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM+ + + V +++ R+ ++ G G+ N+ G+ ++
Sbjct: 287 VHLPMEPLKGDPSWLGPGAIYVHLNDEEIERRVERAIASVPGAVGMNNHMGSRATADPRV 346
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + L F D ++ +++ +A +L +PY L+LD D I+E+L+ L
Sbjct: 347 IRAVLRVAKRHNLFFLDSKTTNKSVIPQIAKELGVPYAEDGLFLDAVNDVGHIKEQLRKL 406
Query: 345 EEIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
++A G AI + ++ I + L + + +V +S L L P+S
Sbjct: 407 AQLALKNGSAIAIGHVGVTGPNTVRAIKEMLPEFERLGIELVYVSTL--LKHPAS 459
>gi|302187492|ref|ZP_07264165.1| hypothetical protein Psyrps6_14148 [Pseudomonas syringae pv.
syringae 642]
Length = 260
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 98/225 (43%), Gaps = 7/225 (3%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
A +++++ LG + R + LP +TLA + + +EA + G+ +
Sbjct: 25 SGKPPKAYLSLIIDDLGQNPQRDSRTLA-LPGPVTLAIMPDTPHATEFAREAHRAGKTVM 83
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L +PM Y + +L +RL +L + G+ N+ G+ + + +
Sbjct: 84 LHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHMGSRMTAEPVA 137
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ E +R L F D +S + + A ++ L + D++LDD+ + I +L+
Sbjct: 138 MTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTA 197
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+IAR G A+ + + +++V+ + L + V + L +
Sbjct: 198 IKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSMI 242
>gi|326796766|ref|YP_004314586.1| hypothetical protein Marme_3537 [Marinomonas mediterranea MMB-1]
gi|326547530|gb|ADZ92750.1| protein of unknown function DUF610 YibQ [Marinomonas mediterranea
MMB-1]
Length = 344
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 116/270 (42%), Gaps = 4/270 (1%)
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ + S P L + + +EV DK S RI+I++
Sbjct: 77 EEAPADASSPVGSGSLEPFIVPFSPFYQRVRLTPPSEVIRKDK-VKSREQLPRISIIIDD 135
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
LG ++ G + ++N LP + LA + + ++ ++ + +L PM+ ++ +
Sbjct: 136 LGYNRRGMESSLN-LPVEVALAILPHTPFGKKTALKSIEQNRVTLLHAPME--NQRELKL 192
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLF 299
L + ++ + LR L G GV N+ G++L ++ ++ + + R L F
Sbjct: 193 GPGGLYASMGEEEFKSVLRDDLASLPGIKGVNNHMGSLLTTDSQAMNWVMQVIGDRSLFF 252
Query: 300 FDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV 359
D +S ++ +A + ++ D++LD+ KI ++ L ++A G AI +
Sbjct: 253 VDSVTSADSVAYTMALRHSINTTKRDVFLDNIRSEKKIEQQFLKLIQLAHQNGHAIAIGH 312
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ E++ +S+ L V +VP+ L
Sbjct: 313 PYPETMAYLSKRLADLSKLSVRLVPIDELM 342
>gi|197286993|ref|YP_002152865.1| exported polysaccharide deacetylase [Proteus mirabilis HI4320]
gi|194684480|emb|CAR46240.1| putative exported polysaccharide deacetylase [Proteus mirabilis
HI4320]
Length = 321
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 98/231 (42%), Gaps = 5/231 (2%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ A A++AIV+ G + I LP +++A N +A +G+E ++
Sbjct: 26 APAFSAKLAIVIDDFGY-RKKEDNQILQLPTAVSIAILPNSPHGKEMATKAHAQGREILI 84
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+PM + E D TLK + ++ ++ ++ R G+ N+ G+ + S++++
Sbjct: 85 HMPMAPISKQPLEKD--TLKPSMDQAEINRIIQNAINRVPYAVGMNNHMGSAMTSDRQAM 142
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + K L F D + A +P + ++LD+ + R++L
Sbjct: 143 DRVIKALNHSDLYFLDSVTIGNTQAATAAKAAGVPSLRRHVFLDNVQTEAETRQQLNRAI 202
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+AR G AI + ++ + Q L D+ +V S L SP S
Sbjct: 203 NLARKNGFAIAIGHPHPSTVRALQQQLPLLPA-DIQLVAPSGLLT-PSPDS 251
>gi|300714671|ref|YP_003739474.1| conserved uncharacterized protein YigQ [Erwinia billingiae Eb661]
gi|299060507|emb|CAX57614.1| conserved uncharacterized protein YigQ [Erwinia billingiae Eb661]
Length = 302
Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 93/227 (40%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A +++IV+ G + + + +P NI++A N +A + G E
Sbjct: 10 MACTAHAGKLSIVIDDFGY-RPKEENQVLQMPKNISVAVLPNATHAREMATKAHQLGHEV 68
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 69 LIHLPMAPLSKQPLEKD--TLRPDMSSSEIARIIREAVADVPFAVGLNNHMGSAMTSSLP 126
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + F D + + + A ++ + ++LDD + IR++
Sbjct: 127 GMQKVMQVLDHYNFYFLDSMTIGNSQSTRAAAGTSVKVLKRRVFLDDTQNEADIRKQFTR 186
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+A+ G AI + ++ V+ + L DV++V S L
Sbjct: 187 AVRLAQRDGSAIAIGHPHPTTVRVLQEMLPTLPA-DVTLVRPSQLLN 232
>gi|39996868|ref|NP_952819.1| hypothetical protein GSU1769 [Geobacter sulfurreducens PCA]
gi|39983756|gb|AAR35146.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
Length = 290
Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 114/271 (42%), Gaps = 1/271 (0%)
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ + P + ER L + E ++ PA + +A+++
Sbjct: 21 KQPVVQQTPPPVVERHKLPPREPEQPVAHEDYTGVIHHPAEPQRAQRPTGPGTLAVIIDD 80
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
+G RA+ + +T A + R +EA+++G E ++ +PM+
Sbjct: 81 MGKGLP-EARALMDIGIPLTFAIIPGLPKVRRVAEEARQRGIEVMVHLPMEPKGYPERRL 139
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLF 299
++ L ++Q ++ R+ L G N+ G+ N++ V+ +RGL F
Sbjct: 140 EANGLLLSQGDDEIAGRVNGYLNEIPQAVGANNHMGSGFTENRQKMAVVMGVLKERGLFF 199
Query: 300 FDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV 359
D +SP ++ +A ++ + V +++LD+ + I +L+ IAR G AI +
Sbjct: 200 VDSKTSPVSVGDAVAREMGVRTAVRNVFLDNIQESGYITNQLRQAASIARKRGNAIAICH 259
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+I+ ++ L + ++ V +S L +
Sbjct: 260 PHPATIQTLAVELPRLRDEGITFVTVSRLVR 290
>gi|134299434|ref|YP_001112930.1| hypothetical protein Dred_1577 [Desulfotomaculum reducens MI-1]
gi|134052134|gb|ABO50105.1| protein of unknown function DUF610, YibQ [Desulfotomaculum reducens
MI-1]
Length = 271
Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 3/226 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+AIV+ G + T L IT+A N + +EA K+G E IL PM+
Sbjct: 41 PMLAIVIDDFGGADTHGVAQFMELKQPITVAVMPNLVNSKEHSEEAHKRGHEVILHQPME 100
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ +K + +++ +L G N+ G+ + SNK+ + +
Sbjct: 101 PLHGKDSWLGPGAIKSDMSYEEIKKVFLDNLATVPHAEGFNNHTGSKITSNKDKVAPMLE 160
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+GL D +S ++ +A + +P++ D++LD+ + I LK IA+
Sbjct: 161 VAKDKGLFVLDSRTSDKSQVIKVAKSMQVPWVKRDVFLDEVKSKAVITRNLKKACAIAKK 220
Query: 351 TGQAIGVAVAFD---ESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
G AI + + E + + L V +VPLS + KL S
Sbjct: 221 QGYAISIGHVGPGGNVTAEAVKEALPLIEKEGVKLVPLSQVVKLKS 266
>gi|298505881|gb|ADI84604.1| divergent polysaccharide deacetylase domain protein [Geobacter
sulfurreducens KN400]
Length = 295
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 114/271 (42%), Gaps = 1/271 (0%)
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ + P + ER L + E ++ PA + +A+++
Sbjct: 26 KQPVVQQTPPPVVERHKLPPREPEQPVAHEDYTGVIHHPAEPQRAQRPTGPGTLAVIIDD 85
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
+G RA+ + +T A + R +EA+++G E ++ +PM+
Sbjct: 86 MGKGLP-EARALMDIGIPLTFAIIPGLPKVRRVAEEARQRGIEVMVHLPMEPKGYPERRL 144
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLF 299
++ L ++Q ++ R+ L G N+ G+ N++ V+ +RGL F
Sbjct: 145 EANGLLLSQGDDEIAGRVNGYLNEIPQAVGANNHMGSGFTENRQKMAVVMGVLKERGLFF 204
Query: 300 FDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV 359
D +SP ++ +A ++ + V +++LD+ + I +L+ IAR G AI +
Sbjct: 205 VDSKTSPVSVGDAVAREMGVRTAVRNVFLDNIQESGYITNQLRQAASIARKRGNAIAICH 264
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+I+ ++ L + ++ V +S L +
Sbjct: 265 PHPATIQTLAVELPRLRDEGITFVTVSRLVR 295
>gi|332982318|ref|YP_004463759.1| hypothetical protein Mahau_1756 [Mahella australiensis 50-1 BON]
gi|332699996|gb|AEE96937.1| protein of unknown function DUF610 YibQ [Mahella australiensis 50-1
BON]
Length = 267
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 98/236 (41%), Gaps = 8/236 (3%)
Query: 164 FCSNASGAR---IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
F + A + IAI++ G + GT+ + L +T A N + A G
Sbjct: 29 FANAAHTPKTHYIAIIIDDFGNNGDGTKEMLE-LSIPLTAAVMPNLPYTEHDANMAHDAG 87
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
E I+ PMQ + + + ++ R+ L + G+ N+ G+
Sbjct: 88 LEVIMHTPMQPINGKPSWLGPKGITTDLPDDEIKARINEGLEQIKWAIGMNNHMGSKATQ 147
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
+K + + + +R + F D + ++ +A LN+P + D++LD+ ++ I+++
Sbjct: 148 DKRVMKSVLEIAKQRNMFFVDSKVTANSVIDEVASSLNVPCVSRDIFLDNSKNQHDIQKQ 207
Query: 341 LKGLEEIARTTGQAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
L+ L IA G AIG+ E + + I + R + +S + ++
Sbjct: 208 LEKLGNIAVEKGYAIGIGHVGPEGGVVTAKAIRTEIPLLEKRGIQFTYISKVVDIA 263
>gi|328545770|ref|YP_004305879.1| Divergent polysaccharide deacetylase family [polymorphum gilvum
SL003B-26A1]
gi|326415510|gb|ADZ72573.1| Divergent polysaccharide deacetylase family [Polymorphum gilvum
SL003B-26A1]
Length = 375
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/377 (25%), Positives = 166/377 (44%), Gaps = 12/377 (3%)
Query: 16 RKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLT--- 72
++ F+ +G LF I ++I + G +
Sbjct: 3 KRKFFRLPFGLIG-AGLFTVMITTALVWIGVVDDPFGGEPIAVIPLEKTVEGLSSRDIAV 61
Query: 73 IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIE 132
+ L E P D + Q + Q + T +
Sbjct: 62 VELKPEFADGPLGPDASRSARQGALGPRFEGAEAQG-------EAGSGEGPGVALSTTPD 114
Query: 133 ERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAIN 192
R+ L G +V A + S +IAIV+ G+G+S+ G++ A++
Sbjct: 115 SRVTERTDYGLLPKIGDNGLRPLDVYAK-RVTAELGSTPKIAIVIGGIGLSEAGSRNALD 173
Query: 193 LLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQ 252
LPA++TLA A GN ++ WM+EA++ G E +LQ+P++ FD N+ +TL V+ +
Sbjct: 174 SLPADVTLALAPYGNEIEGWMQEARQAGHELLLQLPLEPFDFPDNDPGPHTLLVSLRGAE 233
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRV 312
++RL + L R T Y GV+N+ GA S + S + + +E +RGL++ DDGSS R++ +
Sbjct: 234 FMDRLTWLLSRTTNYVGVVNFMGARFSSTEASMQYLLEEVTRRGLMYVDDGSSSRSVAQP 293
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A P+ D+ LD D+I +L LE +AR G A+ A ++ ++ W
Sbjct: 294 VASAAQTPFSKVDVVLDAVPKPDEINARLLQLEALARARGIAVAAGSALPVTVRQLADWS 353
Query: 373 QQEHVRDVSVVPLSCLA 389
+ R + +VP+S
Sbjct: 354 RDLEQRGLMLVPISATV 370
>gi|127514737|ref|YP_001095934.1| protein of unknown function DUF610, YibQ [Shewanella loihica PV-4]
gi|126640032|gb|ABO25675.1| protein of unknown function DUF610, YibQ [Shewanella loihica PV-4]
Length = 251
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
A+++I++ +G Q T A+ LP++ITL+ + +R A KG E +L +PM
Sbjct: 18 AAQVSIIIDDIGYRQ--TDEAVLALPSDITLSVLPHTPLGERLAAIAHDKGHEIMLHLPM 75
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
QA + E L + Q L + + + GV N+ G++L +
Sbjct: 76 QALNGK--EMGPGGLTNQMSEQALKRAVDDAFKSVPYAKGVNNHMGSLLTQLDAPMTWLM 133
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ ++ F D ++ + A +L +P + L+LD+ V + + L ++A
Sbjct: 134 ESLKQQDNYFVDSMTTRYSKASDAANRLGIPLLRRQLFLDNDVSPQGLERQFNQLIQLAN 193
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
GQ I +A + E+I + L + +++V S L
Sbjct: 194 KEGQLIVIAHPYPETISFLKANLSRLSDEGIALVNTSRLL 233
>gi|315127791|ref|YP_004069794.1| hypothetical protein PSM_A2729 [Pseudoalteromonas sp. SM9913]
gi|315016305|gb|ADT69643.1| hypothetical protein PSM_A2729 [Pseudoalteromonas sp. SM9913]
Length = 250
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 4/230 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S +IAIV+ +G Q + LP ++ + + + A + +E
Sbjct: 12 ATSSAVKAKQIAIVIDDIGYHQRDLE--FLSLPGQLSYSILPHTPYSQIFATLASQSNKE 69
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+L +PMQA + L + QL L +L GV N+ G+ L
Sbjct: 70 LLLHVPMQALNGKKL--GPGALTLNMDKAQLQQTLGNALASLPQVKGVNNHMGSALTQQS 127
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ + + KR L F D ++ + + A L + + ++LD+ ++++ +L+
Sbjct: 128 QAMKWTMEVLKKRQLYFLDSRTTELSQAQNAANFLGVENISRHVFLDNITTTEQLQLRLE 187
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
L+ A AI +A + E+I+ + L Q + +VP+S L +
Sbjct: 188 ELKSKATKYQFAIAIAHPYPETIDFLRHALPQLSEQGFELVPVSQLVERK 237
>gi|298530220|ref|ZP_07017622.1| protein of unknown function DUF610 YibQ [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509594|gb|EFI33498.1| protein of unknown function DUF610 YibQ [Desulfonatronospira
thiodismutans ASO3-1]
Length = 440
Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ I++ LG ++ + L +T + + + + A KK E +L +
Sbjct: 200 KGSGSLVIIIDDLGECLEFARK-LAELNFPVTYSILPYLHKTEEVAEFASKKDFEVMLHM 258
Query: 228 PMQAFDE-SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
PM+ E L V T +++ +L +SL + G+ N+ G+ + E +
Sbjct: 259 PMEPDTYHRGVEPGPGALFVDMTPREIRRQLVHSLEQVPQATGMNNHMGSAFTRHYEGMQ 318
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
V+F+E KR + F D ++P ++ R LA + L +M ++LD+ I +L+ E+
Sbjct: 319 VVFEELEKRDMFFLDSVTTPDSVARRLARETGLDFMQRHVFLDNVRSIQAITYQLQKAEQ 378
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+A G A+ + + E++E + QW + + +++ + L
Sbjct: 379 LASRHGMAVAIGHPYPETLEALQQWSKNRDAK-INMASVDELL 420
>gi|226326856|ref|ZP_03802374.1| hypothetical protein PROPEN_00716 [Proteus penneri ATCC 35198]
gi|225204693|gb|EEG87047.1| hypothetical protein PROPEN_00716 [Proteus penneri ATCC 35198]
Length = 300
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 95/230 (41%), Gaps = 4/230 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
+ A++AIV+ G + I LP +++A + A +G+E +
Sbjct: 8 STPVFAAKLAIVIDDFGY-RKKEDNQILQLPTAVSIAILPDSPHGKEIATRAHAQGREIL 66
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E D TLK + ++ +++++ G+ N+ G+ + S++++
Sbjct: 67 IHMPMAPISKQPLERD--TLKPSMDQAEINRIIQHAINNVPYAVGMNNHMGSAMTSDRQA 124
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + K L F D + A +P + ++LD+ + R++L
Sbjct: 125 MDRVIKALNHSNLYFLDSVTIGNTQAATAAKAAGVPSLRRHVFLDNVQTEAETRQQLNRA 184
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+AR G AI + ++ + Q L D+ +V S L K S
Sbjct: 185 IALARKNGSAIAIGHPHPSTVRALQQQLPLLPA-DIQLVAPSTLLKPQSE 233
>gi|150392120|ref|YP_001322169.1| protein of unknown function DUF610, YibQ [Alkaliphilus
metalliredigens QYMF]
gi|149951982|gb|ABR50510.1| protein of unknown function DUF610, YibQ [Alkaliphilus
metalliredigens QYMF]
Length = 286
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 97/225 (43%), Gaps = 5/225 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AIV+ G + +GT +N++ +T A K A K G E I+ IPM+
Sbjct: 62 VAIVIDDFGNNGSGTDEMMNII-QPLTFAVIPFLPYSQEEAKRANKAGHEVIVHIPMEPK 120
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + T +++ + + ++ G N+ G+ + +K E + +
Sbjct: 121 KGNPKWLGDRGITSNLTSEEVHSIVLEAIEDVQYAVGANNHMGSKITEDKRIMEAVMQVL 180
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ D +S ++ + +A + N+P + ++LD++ + + I+ +++ L +A +G
Sbjct: 181 KANDMYMIDSKTSQTSIVKEVADQYNVPVLERAIFLDNEKNVEAIKRQIEKLAVVALESG 240
Query: 353 QAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
A+ + E + E I Q L + + ++P S L
Sbjct: 241 SAVAIGHVGPEGGRITAEAIKQMLPYLQEKGIEIMPASKLLNKPR 285
>gi|114565173|ref|YP_752687.1| protein of unknown function DUF610, YibQ [Shewanella frigidimarina
NCIMB 400]
gi|114336466|gb|ABI73848.1| protein of unknown function DUF610, YibQ [Shewanella frigidimarina
NCIMB 400]
Length = 238
Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 99/222 (44%), Gaps = 4/222 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A+ ++AI++ +G T A LP++ITL+ + + ++ KG E +L
Sbjct: 2 PATATKLAIIIDDIGYRL--TDEAALSLPSSITLSVLPHTPLGQKLAQDGYHKGHEIMLH 59
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PMQA + L Q+ +L+ + G N+ G++L E
Sbjct: 60 LPMQALNGKAL--GPGGLTNDMNEAQIKQQLQSAFSNIPFAKGANNHMGSLLTQMDEPML 117
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + ++ L F D ++ A +L +P + ++LD+ + + + + +
Sbjct: 118 WVMQSLKQQQLFFVDSFTTKYTKASSKAMQLGVPSLRRHIFLDNDIGERALERQFQQMIT 177
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++ G+ + +A + E+I ++ L + + D+++VP S L
Sbjct: 178 QSKQQGKLVVIAHPYPETIRFLNANLARLNDNDITLVPTSQL 219
>gi|163795616|ref|ZP_02189582.1| hypothetical protein BAL199_26487 [alpha proteobacterium BAL199]
gi|159179215|gb|EDP63748.1| hypothetical protein BAL199_26487 [alpha proteobacterium BAL199]
Length = 264
Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 10/261 (3%)
Query: 139 LSKKELLAKNKVGREDTEVPAMDKNFCSNA----SGARIAIVVSGLGISQTGTQRAINLL 194
+S EL D VPA + F + A IAIV+ LGI + + RAI+ L
Sbjct: 2 VSPPELQRAPP---PDGIVPAW-RRFAAVAEPANGRPMIAIVLDDLGIDKRRSGRAID-L 56
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLL 254
PA +TLAF + N L A+ +G E ++ +PMQ + L + ++++
Sbjct: 57 PAPLTLAFLAYANELPEQTGRARSRGHELLVHLPMQP-HGHDADPGPNVLDMELGLEEVA 115
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
R+ +SL++ G+ GV N+ G++ N + ++ + GLLF D ++P+++ +A
Sbjct: 116 RRVDWSLKQFDGFVGVNNHMGSLFTENADGMRIVAEAMRNNGLLFLDSVTTPKSVGEQVA 175
Query: 315 PKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
L +P D++LD+ ++ +L E +ARTTG AI + D ++ V+ W+ +
Sbjct: 176 RSLGVPATKRDVFLDNTDTAAEVELRLAQTERLARTTGTAIAIGHPRDATLNVLEAWIPK 235
Query: 375 EHVRDVSVVPLSCLAKLSSPS 395
+VPL+ + + + S
Sbjct: 236 AKADGFVLVPLTAVLQARTGS 256
>gi|254292534|ref|YP_003058557.1| hypothetical protein Hbal_0158 [Hirschia baltica ATCC 49814]
gi|254041065|gb|ACT57860.1| protein of unknown function DUF610 YibQ [Hirschia baltica ATCC
49814]
Length = 416
Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 87/385 (22%), Positives = 159/385 (41%), Gaps = 18/385 (4%)
Query: 27 LGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL------------TIP 74
F + + ++ ++ + AP P+ IP
Sbjct: 20 AAGFAAIAVVVGLSAGFVQLTGNEDAGSPHASVGLFVDRNAPAPVLKTRLADQPLIHDIP 79
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN-----KPTRSTSIDSLP 129
+ + + ++ + + SG+ V +
Sbjct: 80 TEHHVETASHEDTEPSLPVSDPTHQAPSYAEYAETDSGEDVRITRLSQAEKIQPVSEERK 139
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG-ARIAIVVSGLGISQTGTQ 188
+ I GL + + + +D PA +G ++A++V GLGI ++ T
Sbjct: 140 ALVRAPIQGLYENGAVGRLPKIADDGRRPADIYARPHTPNGKPQVALIVGGLGIKRSLTM 199
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
+AIN LP +TL+F + L W+ A+ G E +L++PM+ +D + TL T
Sbjct: 200 QAINDLPPEVTLSFVPYSSDLQTWVNRARDAGHEVLLEVPMEPYDYPNVDTGPDTLLTTL 259
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+ Q+ RL+ L + TGYFGV+NY+GA L + I +E RGL DG++ R+
Sbjct: 260 SAQENERRLKVILGQTTGYFGVINYQGARLATESRVLSPIMREIHNRGLAMIYDGAANRS 319
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+ +A ++N+ ++ AD +D D I + L +E +A A+GV AF +++
Sbjct: 320 VFPSVAKEINMNFVEADRIVDTVPSADAIDKNLLHIEALALQNKAALGVGFAFPVTVDQF 379
Query: 369 SQWLQQEHVRDVSVVPLSCLAKLSS 393
QW ++ +VP S L + +
Sbjct: 380 KQWSDTLDMKGYELVPASVLTGIQT 404
>gi|157964031|ref|YP_001504065.1| hypothetical protein Spea_4220 [Shewanella pealeana ATCC 700345]
gi|157849031|gb|ABV89530.1| protein of unknown function DUF610 YibQ [Shewanella pealeana ATCC
700345]
Length = 251
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 47/232 (20%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
++ ++IAI++ +G Q+ +A+ LPANITL+ + +A +G E
Sbjct: 13 PSASVFASQIAIIIDDIGYRQS--DKAVLSLPANITLSILPHTPLGKDLASKAYIQGNEI 70
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQA + L T + + ++ S+ G N+ G+ L E
Sbjct: 71 LVHLPMQALNGKTI--GPGALTNTMSEIKFKAQVEDSINSVPHASGANNHMGSFLTQLNE 128
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + F D ++ ++A + +P + +++LD+ + + ++ K
Sbjct: 129 PMRWVMESLRQHNIYFIDSMTTKYTRAGIVAESMGIPILRREIFLDNDRSQSGLEKQFKH 188
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+A G+ + +A + E+I +++ LQ+ ++ +V S L SP
Sbjct: 189 AISLAHAKGKIVVIAHPYPETIAFLTKNLQRLANANIELVHTSQLV---SPH 237
>gi|288958439|ref|YP_003448780.1| hypothetical protein AZL_015980 [Azospirillum sp. B510]
gi|288910747|dbj|BAI72236.1| hypothetical protein AZL_015980 [Azospirillum sp. B510]
Length = 375
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 117/276 (42%), Gaps = 3/276 (1%)
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVV 177
+ + P ++ + IAIV+
Sbjct: 100 ASAQPQAESRPPATTVAMLPPPVPPAVAPVQPPPGNAALWRRNALPAEVPPGKPVIAIVI 159
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
+G+ + + R + L +TL++ L K A+ G E +L +PM+ +
Sbjct: 160 DDMGLDRRRSTR-MASLHGPLTLSWLPYARDLSAQSKAARANGHELMLHMPMEPSVK--A 216
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ L V+ +++ R R +L GY GV N+ G+ +++ + + E +RGL
Sbjct: 217 DPGPNALLVSLDKGEIVKRFRAALDSFDGYVGVNNHMGSRFTADRAALAPVLAELHRRGL 276
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
L+ D ++P + LA +L +P++ D++LD+Q ++ +L E++A+ G A+ +
Sbjct: 277 LWLDSRTTPNSAGIGLAQELKMPWVGRDVFLDNQETVAAVKAQLAKTEQVAKRQGYAVAI 336
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
D +IE ++ WL R +VP+S + +
Sbjct: 337 GHPHDATIEALASWLPDVQKRGFVLVPVSAVVRTHH 372
>gi|88858432|ref|ZP_01133074.1| hypothetical protein PTD2_13619 [Pseudoalteromonas tunicata D2]
gi|88820049|gb|EAR29862.1| hypothetical protein PTD2_13619 [Pseudoalteromonas tunicata D2]
Length = 251
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 95/220 (43%), Gaps = 4/220 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ +G AIN LP ++ + + ++A+ +E +L +PM
Sbjct: 15 AGQVAIVIDDIGY-HERDLDAIN-LPGEVSFSILPFTPFAKSFAQQAQLAKKEMLLHVPM 72
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
QA E + +QL + L +L G+ N+ G++L +
Sbjct: 73 QAISGK--ELGPGAITYDMNKEQLQHMLARALDDLPQVKGINNHMGSLLTQKIKPMSWTM 130
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ +R L F D ++ + + +A + + +++D+ ++ ++ L +A+
Sbjct: 131 EVLKERNLYFLDSKTTQHSQAQHMANLFGVDNISRHVFIDNIPSEKQMTFRMNQLIRLAK 190
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
AI +A + E++ + Q L + + + +VPLS L
Sbjct: 191 KNDYAIAIAHPYPETLAFLEQALPKLAEQGIKLVPLSDLV 230
>gi|66048112|ref|YP_237953.1| hypothetical protein Psyr_4888 [Pseudomonas syringae pv. syringae
B728a]
gi|63258819|gb|AAY39915.1| Protein of unknown function DUF610 [Pseudomonas syringae pv.
syringae B728a]
gi|330970736|gb|EGH70802.1| hypothetical protein PSYAR_09607 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 260
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A S A +++++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPAENSGKPSKAYLSLIIDDLGQNPQRDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+A + G+ +L +PM Y + +L +RL +L + G+ N+
Sbjct: 74 QAHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ +IAR G A+ + + +++V+ + L + V + L +
Sbjct: 188 EAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSMI 242
>gi|54307443|ref|YP_128463.1| hypothetical protein PBPRA0222 [Photobacterium profundum SS9]
gi|46911863|emb|CAG18661.1| hypothetical protein PBPRA0222 [Photobacterium profundum SS9]
Length = 271
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 113/252 (44%), Gaps = 6/252 (2%)
Query: 139 LSKKELLAKNKVGRE--DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPA 196
S+K+ + ++ + R T + +N A++AIV+ LG ++ LP
Sbjct: 20 TSRKKAIRQSTMRRNVVKTASLILLLLTSTNIHAAQLAIVIDDLGY--QAMPELLSNLPP 77
Query: 197 NITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNR 256
+T++ N +AKK+ +E +L +PM+ + E TL + Q L +
Sbjct: 78 EVTISILPNTPFDLAVAAQAKKQHRETLLHMPMEPEHLAPLEV--NTLTSAMSQQTLQHT 135
Query: 257 LRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPK 316
LR +L R + N+ G+ L + ++ I E + L + D ++ +++ + A
Sbjct: 136 LRQALTRVPNAIAINNHMGSALSQDTQAMGWIMAELKQHNLYYLDSRTTAKSIAQQQATS 195
Query: 317 LNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEH 376
++ + ++LD ++ + ++L + A+ G AI + ++ +++ L
Sbjct: 196 HHVLSLRRHVFLDHYQTKEFVTKQLMSAIKRAKQYGYAIAIGHPHPVTLSTLNELLPNLT 255
Query: 377 VRDVSVVPLSCL 388
D+++V LS L
Sbjct: 256 EEDITLVRLSTL 267
>gi|251791501|ref|YP_003006222.1| hypothetical protein Dd1591_3943 [Dickeya zeae Ech1591]
gi|247540122|gb|ACT08743.1| protein of unknown function DUF610 YibQ [Dickeya zeae Ech1591]
Length = 309
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
++A+V+ G + + +PA I++A N +A +G+E ++
Sbjct: 19 PVWAGKLALVIDDFGYRPHNENQVLA-MPAAISVAVLPNAPYAREMAMKAHAQGREVLIH 77
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM + E D TL+ + +++ LR ++ + G+ N+ G+ + ++ +
Sbjct: 78 LPMAPMSKQPLERD--TLRPDMSSEEIARILRDAVNKVPYAVGLNNHMGSAMTASLPGMQ 135
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ + L F D + + A + + ++LDD + IR + +
Sbjct: 136 KVMQAMTTYRLYFLDSMTIGSSQASRAAAGTGIKVLKRKVFLDDTQNVADIRRQFSRAVD 195
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
IA+ +G AI + +I+V+ Q L D+ +V S L P
Sbjct: 196 IAQRSGYAIAIGHPHPATIQVLQQMLPTLPA-DIVLVRPSQLLNEPEP 242
>gi|304407156|ref|ZP_07388810.1| protein of unknown function DUF610 YibQ [Paenibacillus
curdlanolyticus YK9]
gi|304344143|gb|EFM09983.1| protein of unknown function DUF610 YibQ [Paenibacillus
curdlanolyticus YK9]
Length = 284
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 91/222 (40%), Gaps = 5/222 (2%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+AIV+ G TGT + LP T+A + + A K G + I+ +PM+
Sbjct: 56 RVAIVIDDFGNGMTGTTEMM-KLPFPFTVAVMPFMPTTRADAETAHKLGHDVIVHMPMEP 114
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
L + ++ R+ ++ G+ N+ G+ + +++ ++
Sbjct: 115 NKGKREWLGPGALTTDLSDSEIRKRVEAAIDNVPYAVGMNNHMGSKVTADERVMRIVLTV 174
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+RGL F D ++ + + +A +L +P + ++LDD I +++ L +
Sbjct: 175 CKERGLFFLDSRTTYKTVVPKIANELGVPLLSNHVFLDDVYSVQHIAKQIGVLRKYLEEH 234
Query: 352 GQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ + ++ V+ Q + V +V LS L +
Sbjct: 235 ENCVAIGHVGPPGKKTAAVLLQSTPVLREKAV-IVKLSDLVQ 275
>gi|310765988|gb|ADP10938.1| conserved uncharacterized protein YigQ [Erwinia sp. Ejp617]
Length = 304
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 93/232 (40%), Gaps = 4/232 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S A +++IV+ G Q+ + +PA I++A N +A + G E
Sbjct: 15 AIASPAWAGKLSIVIDDFGYRPALEQQVLQ-MPAAISVAVLPNAPHAREMATKAHQSGHE 73
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + +++ +R + G+ N+ G+ + S+
Sbjct: 74 VLIHLPMAPLSKQPLEKD--TLRPDMSTEEIGRIIREAAAAVPYAVGLNNHMGSAMTSSL 131
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + F D + + A N+ + ++LDD + IR +
Sbjct: 132 PAMQKVMQILNHYHFYFLDSMTIGNSQATRAAEGTNVKVVKRRVFLDDSQNEADIRVQFT 191
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+A+ G AI + ++ V+ Q L D+ + S L + P
Sbjct: 192 RAVRLAQRDGSAIAIGHPHPSTVRVLQQMLPGLPA-DIILARPSQLLNAAQP 242
>gi|323697918|ref|ZP_08109830.1| protein of unknown function DUF610 YibQ [Desulfovibrio sp. ND132]
gi|323457850|gb|EGB13715.1| protein of unknown function DUF610 YibQ [Desulfovibrio
desulfuricans ND132]
Length = 410
Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
A G ++ +V+ +G + + L +T A + + ++ K + ++
Sbjct: 187 PEAKGPKLVVVIDDVGEDY-RVLKGLAGLDLPLTFAVWPHASHTRECVEWIAKTHHDLLI 245
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
PM+ + L V+ T Q+ R+ +L R GV N+ G+ ++K
Sbjct: 246 HFPMEPMGYPQVKPGDDALFVSMTPDQVRQRVADNLARIPEAIGVNNHMGSRFTADKAGM 305
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
V EF + GL F D +S +++ R A + +P+ D +LD+ D + I +L+ E
Sbjct: 306 AVALTEFKRHGLFFLDSLTSGKSVGRATAKTVGIPFYERDTFLDNVKDVNAILLQLRKTE 365
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G+AI + + ++++ + W Q + V+ LS L
Sbjct: 366 RVAQRQGRAIAIGHPYRQTLDALRAW-QDSRDPAIQVITLSKL 407
>gi|298484779|ref|ZP_07002879.1| Putative periplasmic protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160633|gb|EFI01654.1| Putative periplasmic protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 260
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A A +++++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPAENTGKPPKAYLSLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
EA + G+ +L +PM Y + +L +RL +L + G+ N+
Sbjct: 74 EAHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ +IAR G A+ + + +++V+ + L + + V + L +
Sbjct: 188 EAITRQLQTAIKIARKHGSAVVIGHPYPVTLDVLERELPKLKDQGVEWIDLRSMI 242
>gi|87120387|ref|ZP_01076282.1| hypothetical protein MED121_09348 [Marinomonas sp. MED121]
gi|86164490|gb|EAQ65760.1| hypothetical protein MED121_09348 [Marinomonas sp. MED121]
Length = 433
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 104/239 (43%), Gaps = 3/239 (1%)
Query: 147 KNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNG 206
K + ++ + N I I++ LG ++ G + +++ LP + LA +
Sbjct: 193 KTPIVVDEAVNEIAAQELVENDDRPSITIIIDDLGYNRRGMEESLD-LPVEVALAILPHT 251
Query: 207 NSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTG 266
+ + A ++ + +L +PM+ +E + L +L L+ + G
Sbjct: 252 PFSKKTARAATEQARTILLHVPME--NERELKLGPGGLYKKMDEAELKKTLQEGIESVPG 309
Query: 267 YFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADL 326
G+ N+ G++L + ES + + + L F D +SP ++ A +L D+
Sbjct: 310 ITGINNHMGSLLTQDVESMQWVMEVIQPLELFFVDSLTSPNSVALSKALSFDLTTTRRDV 369
Query: 327 YLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
+LD+ + I ++ K L IAR G+A+ + + ++ +++ L Q V ++ L
Sbjct: 370 FLDNIQEEKAIDKQFKRLLAIARKRGKALAIGHPYPATMNYLAKHLSQLEDEGVQLISL 428
>gi|104779656|ref|YP_606154.1| hypothetical protein PSEEN0377 [Pseudomonas entomophila L48]
gi|95108643|emb|CAK13337.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 254
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A ++I++ LG S R + LP +T+A + + ++A K G+
Sbjct: 15 AAQAAPGKAYMSIIIDDLGQSDERDSRTLA-LPGPVTMAIMPDTPHATDFARQAHKAGRT 73
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y +++L RL +L + G+ N+ G+ + + +
Sbjct: 74 VILHMPMDPAT------GPYAWHPGTAIEELARRLDAALAKVPYAAGINNHMGSRMTAQR 127
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + E +R L F D +S + A + L ++ D++LDD + I +L+
Sbjct: 128 EPMHWLMAELQRRHLFFVDSRTSAATVAAAEAQAVGLAHVSRDVFLDDVRTVEAINGQLQ 187
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++AR G A+ + + ++++V+S+ + + + + +V L +
Sbjct: 188 QGIDLARKQGSAVLIGHPYPQTLDVLSREIPKLKAQGIELVSLRQMI 234
>gi|330987186|gb|EGH85289.1| yibQ gene product [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 260
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A A +++++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPVESTGKPPKAYLSLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
EA + G+ +L +PM Y + +L +RL +L + G+ N+
Sbjct: 74 EAHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMAWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ +IAR G A+ + + +++V+ + L + + V + L +
Sbjct: 188 EAINRQLQSAIKIARKHGSAVVIGHPYPVTLDVLERELPKLKDQGVEWIDLRSMI 242
>gi|154251924|ref|YP_001412748.1| hypothetical protein Plav_1471 [Parvibaculum lavamentivorans DS-1]
gi|154155874|gb|ABS63091.1| protein of unknown function DUF610 YibQ [Parvibaculum
lavamentivorans DS-1]
Length = 426
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 91/362 (25%), Positives = 165/362 (45%), Gaps = 21/362 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPS---------KRDNNTVCNQLKNDS 99
A + E E A + P E + D + + ++ +
Sbjct: 65 APEEPVEEPAAPPQAEEPAGMETPAPPQDEPQGETPPLDLDPDELSPDERALLDAARDLN 124
Query: 100 SQHDGQIQNDISGKTVVNKPTR-----------STSIDSLPTIEERLILGLSKKELLAKN 148
+ D I D++ + + I P + L+ ++ L
Sbjct: 125 NGIDRGIDADVADEVKIVGAESVSGGRETPLAEPAEIKLAPVPDPALVEKTAQGPLPKIA 184
Query: 149 KVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNS 208
GR+ +V A + RIA+VVSG+GIS++ T AI++LP +TL+FA G
Sbjct: 185 ADGRKAWQVYARPVPDGTPTDR-RIALVVSGMGISESATSHAIDVLPPEVTLSFAPYGTG 243
Query: 209 LDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF 268
L W+ A+ G E +L++PM+ F N+ +TL + ++ + RL + + R +GY
Sbjct: 244 LQGWIDRARAAGHEVLLELPMEPFGYPQNDPGPHTLLTSLQPKENIERLEWLMSRFSGYA 303
Query: 269 GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYL 328
GVMNY+GA ++ + + + RGLL+ D+G+S R+L LA + +P + A +
Sbjct: 304 GVMNYQGARFTTSATALKPVVAALGARGLLYVDNGASARSLAPQLAGESRMPAVQATRII 363
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
D + + I L LE+ + TG A+GVA F +++ +++W + +VP++ +
Sbjct: 364 DPVQNPEVIATSLDMLEKTSSETGSAVGVASGFPVTVDALAEWAKTLRNDGYVLVPVTAI 423
Query: 389 AK 390
A+
Sbjct: 424 AR 425
>gi|90418832|ref|ZP_01226743.1| possible divergent polysaccharide deacetylase [Aurantimonas
manganoxydans SI85-9A1]
gi|90336912|gb|EAS50617.1| possible divergent polysaccharide deacetylase [Aurantimonas
manganoxydans SI85-9A1]
Length = 384
Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats.
Identities = 121/377 (32%), Positives = 172/377 (45%), Gaps = 19/377 (5%)
Query: 18 SFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR-EIAPIPLTIPLN 76
+ +G I G + L + P V R +A P P
Sbjct: 22 RRRRLSGASIGFACAATMIIAGSTAIALF--------GQPQPRMVDRFAVAASPEPAPTV 73
Query: 77 IEDKQSPSKRDN-NTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERL 135
+ +P R+ V + G G V + + + + ++ L
Sbjct: 74 VPASPAPVVREQLPVVISGSDTAPPPRGG------VGFRVEDPQSLRQNPSTAHMPDDAL 127
Query: 136 ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLP 195
I + L A+ GR +V A S G RIAIVV GLGISQTGT AI LP
Sbjct: 128 IEDSAYGPLPARAPDGRRPYDVYA---GAWSGKPGTRIAIVVGGLGISQTGTLNAIGSLP 184
Query: 196 ANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLN 255
+T F+ +GNSLDRWM+EA++ G E +LQ+P++ + TL V L+
Sbjct: 185 PGVTFGFSPSGNSLDRWMQEARRSGHELVLQVPLEPVGYPQVDPGEDTLTVDDAAAGDLS 244
Query: 256 RLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAP 315
L SL T Y G+MNY G ++ + E + E +RGL+FFDD SS R++ A
Sbjct: 245 ALHASLATITNYVGIMNYMGGRFVAEPAAMEALIAELGRRGLMFFDDASSLRSVAADTAQ 304
Query: 316 KLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQE 375
++P V+DL +D D IR +L LE IAR G AIG A AFD S+ I++W+ +
Sbjct: 305 LQSVPAAVSDLSIDRSQDPADIRSQLDTLERIARAEGTAIGFASAFDVSVATIAKWIGEA 364
Query: 376 HVRDVSVVPLSCLAKLS 392
R + +VPLS LA
Sbjct: 365 RGRGIEIVPLSALANDP 381
>gi|312170645|emb|CBX78908.1| Uncharacterized protein yibQ precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 308
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G Q+ + +PA I++A + +A + G E ++ +PM
Sbjct: 24 KLSIVIDDFGYRPAQEQQVLQ-MPAAISVAVLPHAPHAREMATKAHQSGHEVLIHLPMAP 82
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + +++ +R + G+ N+ G+ + S+ + + +
Sbjct: 83 LSKQPLEKD--TLRPDMSTEEIGRIIREAAATVPYAVGLNNHMGSAMTSSLPGMQKVMRV 140
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
F D + + A ++ + ++LDD + IR + +A+
Sbjct: 141 LNHYQFYFLDSMTIGNSQATRAAAGTSVKVVKRRVFLDDSQNEADIRVQFTRAVRLAQRD 200
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + ++ V+ Q L D+++V S L
Sbjct: 201 GSAIAIGHPHPSTVRVLQQMLTTLPA-DITLVRPSQLLN 238
>gi|83593228|ref|YP_426980.1| hypothetical protein Rru_A1893 [Rhodospirillum rubrum ATCC 11170]
gi|83576142|gb|ABC22693.1| Protein of unknown function DUF610, YibQ [Rhodospirillum rubrum
ATCC 11170]
Length = 432
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 20/344 (5%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN-----DSSQHDGQIQND 109
+P P+P + ++ +PS+ S ++
Sbjct: 82 PPPLPRPA-ETAPPLPADVAPPVQTAPAPSETPAGEKGALPAEFRDLLASDGPGFVMEER 140
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA- 168
+ V+KP ++ + + + E + +P +
Sbjct: 141 LPDDAYVHKPQVKPTVKTAALA-----------PVPRFPEGPAESSGLPWKTYGVAAGKW 189
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S IA+V+ +G+ + T++ + L +TLA+ + + L M+ +K G E ++ +P
Sbjct: 190 SKPAIALVIDDMGLDRVRTEK-VRKLAGPLTLAYLAYADGLAGQMRGGRKAGHEILMHMP 248
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ D N LKV + ++L RLR +L G + G+ N+ G+ ++ ++
Sbjct: 249 MEPLDAKVN-PGPGALKVGLSDDEILTRLRRNLDGGAEFVGINNHMGSRFTADSRGMTLV 307
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
E KRGLL+ D +S ++ LA +P++ ++LD+ D+ + +L LE A
Sbjct: 308 MGELKKRGLLWLDSMTSANSVGLTLAEMAGVPHIGRTVFLDNLNDQAAVARQLAKLEAAA 367
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
R G A+G+ D +I +S WL + +++VP+S L
Sbjct: 368 RQHGVAVGIGHPRDGTIGALSVWLPALAAKGITLVPISALVTTK 411
>gi|330807031|ref|YP_004351493.1| hypothetical protein PSEBR_a348 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375139|gb|AEA66489.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 260
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+++++ LG + +R + LP +T A + + +EA + G+ +L +PM
Sbjct: 33 LSLIIDDLGQNLPRDRRVLA-LPGPVTTAIMPDTPHAAEFAREAHRAGKLVMLHMPMDPA 91
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ +++L RL + G+ N+ G+ + + ++ +
Sbjct: 92 T------GPFAWHPELPIEELGKRLDAAFAAVPYTSGINNHMGSRMTAQPQAMAWLMANL 145
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R F D +S + + A K+ L + D++LDD+ I +L+ ++AR G
Sbjct: 146 QQRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFLDDERTEAAIARQLQTAIDLARQQG 205
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
A+ + + +++ V+ + L + + V + + + L S
Sbjct: 206 SAVMIGHPYPQTLAVLERELPKLKAQGVEWIDIKSMISLRS 246
>gi|269140804|ref|YP_003297505.1| hypothetical protein ETAE_3463 [Edwardsiella tarda EIB202]
gi|267986465|gb|ACY86294.1| hypothetical protein ETAE_3463 [Edwardsiella tarda EIB202]
gi|304560564|gb|ADM43228.1| Putative periplasmic protein [Edwardsiella tarda FL6-60]
Length = 309
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 91/223 (40%), Gaps = 4/223 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
IV+ G + + + +P +T+A N A +G+E ++ +PM +
Sbjct: 28 IVIDDFGY-RPREESQVLEMPLPVTIAVLPNAPHAREMALRAHAQGREILIHLPMAPISK 86
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
E D TL+ T + ++ +R ++ G+ N+ G+ + S+ + + + +
Sbjct: 87 QPLERD--TLQPTMSEAEIQRIIRQAVGNVPYAVGMNNHMGSAMTSSLSGMQKVMRALEQ 144
Query: 295 RG-LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQ 353
L F D + + A + + ++LDD + IR + +AR G
Sbjct: 145 YHFLYFLDSMTIGHSQVSNAALGTGIKVIKRKVFLDDAQNESAIRTQFNRAITLARRNGS 204
Query: 354 AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
AI + ++ V+ Q L+ V V P + L + + P S
Sbjct: 205 AIAIGHPHPATVRVLQQMLRTLPPDIVLVRPSALLNEATRPDS 247
>gi|94499747|ref|ZP_01306283.1| hypothetical protein RED65_14537 [Oceanobacter sp. RED65]
gi|94427948|gb|EAT12922.1| hypothetical protein RED65_14537 [Oceanobacter sp. RED65]
Length = 293
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 6/235 (2%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S+ S A++AI++ +G S AI LP NIT A + + + A + G+E +
Sbjct: 22 ASSPSVAQLAIIIDDIGNSWQKGLDAIA-LPGNITFAVMPHRKHSIQLAERAGRLGKEVM 80
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L PM + E + L + RLR+++ G+ N+ G+ L ++ +
Sbjct: 81 LHAPMATMNNR--ELGAGALHENLGEKLFKLRLRFAIDNIPYVRGINNHMGSRLTTSTNA 138
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ L F D + ++ A + L D++LD + D + + K
Sbjct: 139 MGWVMDVLKEKQLFFVDSRTHANSIAFEQAQQYGLASAKRDVFLDHERTLDAVHRQFKLA 198
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK---LSSPSS 396
IA+ G AI + + ++ + + Q + + +S L K S P++
Sbjct: 199 VTIAKEYGNAIAIGHPHNVTLRYLEHVIPQLEQHHIETIFVSALLKTGNQSRPNT 253
>gi|209963454|ref|YP_002296369.1| hypothetical protein RC1_0107 [Rhodospirillum centenum SW]
gi|209956920|gb|ACI97556.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 240
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 6/237 (2%)
Query: 157 VPAMDKNFCSNASG---ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
+PA +N RI IV+ +G+ + R + LP +TLA+ L
Sbjct: 1 MPAWQRNAVPTPPAEGRPRIVIVIDDMGLDHRRSGRVVA-LPGPLTLAWLPYARDLPIQT 59
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
++A ++G E I+ +PM+ + L V Q+ +++ +RLR +L +GY G+ N+
Sbjct: 60 RQAHQRGHELIVHMPMEPAGSG--DPGPNALLVRQSPEEIRSRLRTNLDAFSGYVGINNH 117
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ ++ ++ V+ +E A+RGLL D ++ + R A + ++P D++LD
Sbjct: 118 MGSRFTADAAASAVVVEELARRGLLVLDSRTTADSRLRDEAVRRHVPSASRDVFLDHVQT 177
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ L+ +E AR G AI + D + E +++WL + +VPLS + +
Sbjct: 178 PAAVSAALEKVEATARRQGLAIAIGHPHDVTTEALARWLPTLAGKGFQLVPLSAVVR 234
>gi|189424978|ref|YP_001952155.1| hypothetical protein Glov_1919 [Geobacter lovleyi SZ]
gi|189421237|gb|ACD95635.1| protein of unknown function DUF610 YibQ [Geobacter lovleyi SZ]
Length = 334
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 58/312 (18%), Positives = 123/312 (39%), Gaps = 22/312 (7%)
Query: 81 QSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLS 140
Q P++++ TV S + + + K N +++ + + + +
Sbjct: 45 QKPAQQNKATVQQLPVPQSPRSSSTVSP-STQKPAENATSQTQTKNDYYSGDIHPA--QL 101
Query: 141 KKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITL 200
+ + + GR A +A++V +G S R++ + I
Sbjct: 102 PSQTVQRPTAGR------------------AELAVIVDDMGSSLQ-EARSLAAIGLPINF 142
Query: 201 AFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYS 260
A A KG E +L +PMQ + + L + Q+ ++L +R+R
Sbjct: 143 AIIPGLRHDREVALFATGKGIEVLLHMPMQPKEYPQRRLEPNGLLLDQSDEELRSRVRGY 202
Query: 261 LRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP 320
L G N+ G+ N + V+ + GL F D ++P+ +A ++ L
Sbjct: 203 LELLPQAVGANNHMGSGFTENADKMRVVLNVLKEHGLFFVDSITTPKTTGLKVAAEIKLA 262
Query: 321 YMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDV 380
D++LD++ + + IR +L AR G+AI + ++ +++ L + + +
Sbjct: 263 SARRDVFLDNEQNEEYIRGQLNQAVARARKNGRAIAICHPHPVTVATLTKALPELQSKGI 322
Query: 381 SVVPLSCLAKLS 392
S+V ++ L
Sbjct: 323 SLVKVTRLITAK 334
>gi|71736710|ref|YP_277009.1| yibQ gene product [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483742|ref|ZP_05637783.1| yibQ gene product [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|71557263|gb|AAZ36474.1| yibQ gene product [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320326473|gb|EFW82525.1| YibQ [Pseudomonas syringae pv. glycinea str. B076]
gi|320331766|gb|EFW87704.1| YibQ [Pseudomonas syringae pv. glycinea str. race 4]
gi|330872598|gb|EGH06747.1| YibO protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|331012105|gb|EGH92161.1| YibO protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 260
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
PA D A +++++ LG + R + LP +TLA + + +E
Sbjct: 19 AAPAED---NGKPPKAYLSLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFARE 74
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + G+ +L +PM Y + +L +RL +L + G+ N+ G
Sbjct: 75 AHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHMG 128
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ + + + + E +R L F D +S + + A ++ L + D++LDD+ +
Sbjct: 129 SRMTAEPVAMAWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAE 188
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
I +L+ +IAR G A+ + + +++V+ + L + + V + L +
Sbjct: 189 AINRQLQSAIKIARKHGSAVVIGHPYPVTLDVLERELPKLKDQGVEWIDLRSMI 242
>gi|167621981|ref|YP_001672275.1| hypothetical protein Shal_0040 [Shewanella halifaxensis HAW-EB4]
gi|167352003|gb|ABZ74616.1| protein of unknown function DUF610 YibQ [Shewanella halifaxensis
HAW-EB4]
Length = 230
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ LG Q+ +A+ LPANITL+ + +EA +G E ++ +PMQA
Sbjct: 1 MAIIIDDLGYRQS--DKAVLSLPANITLSILPHTPLGQSLAREAYLQGNEVLVHLPMQAL 58
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ L T + +L ++ S+ G N+ G++L + +
Sbjct: 59 NGKAI--GPGALTNTMSETELKTQIADSINSVPNASGANNHMGSLLTQLNSPMRWVMESL 116
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ L F D ++ +A + +P + +++LD+ + ++ +A T
Sbjct: 117 QQHNLYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAGLEKQFNYAISLAHTKR 176
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+ +A + E+IE +++ L + ++ +VP S L
Sbjct: 177 NIVVIAHPYPETIEFLNENLHRLQSSNIDLVPTSQLLPQR 216
>gi|148263945|ref|YP_001230651.1| protein of unknown function DUF610, YibQ [Geobacter uraniireducens
Rf4]
gi|146397445|gb|ABQ26078.1| protein of unknown function DUF610, YibQ [Geobacter uraniireducens
Rf4]
Length = 313
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 101/274 (36%), Gaps = 1/274 (0%)
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+ + E + + A + +AI
Sbjct: 40 TKRGASEKPAEKPQVSERLKMPSHPAPQAAKHAAYSAAVVAPVARVRPKPHPTGSGTVAI 99
Query: 176 VVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
+V +G S R++ + +T + + A G E ++ +PM+
Sbjct: 100 IVDDMGSSMQEV-RSLMAIDIPVTFSIIPGLAKSKGVAEAAHGNGGEVMVHMPMEPKGYP 158
Query: 236 YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR 295
+ L ++++ +++ +++ L+ G N+ G+ N+E + + K R
Sbjct: 159 KQRMEKNGLLLSESDEEIAAKVKAYLQAVPYAVGANNHMGSRFTENEEKMQSVLKVLKGR 218
Query: 296 GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAI 355
+ F D +SP ++ LA K+ L ++LD+ + I+ +L+ + + AR G AI
Sbjct: 219 EMFFVDSKTSPASVGYSLARKMGLKAGTRQVFLDNVQNVAAIKAQLQQVADTARKRGSAI 278
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ +I+ +S L ++ V S L
Sbjct: 279 AICHPHQTTIQALSSMLPALKKDGITFVYASQLV 312
>gi|188581495|ref|YP_001924940.1| hypothetical protein Mpop_2243 [Methylobacterium populi BJ001]
gi|179344993|gb|ACB80405.1| protein of unknown function DUF610 YibQ [Methylobacterium populi
BJ001]
Length = 399
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 98/390 (25%), Positives = 166/390 (42%), Gaps = 12/390 (3%)
Query: 5 LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
L PL + + S +V L+ I ++ G IR
Sbjct: 9 LTKPLGVADKAARRRLALRPSAGVAAGAAALALVLLAGGIALTGDPRGGEPRASATIEIR 68
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNN-TVCNQLKNDSSQHDGQIQNDISGKT-VVNKPTRS 122
E P +P +++ S + + V+ + +
Sbjct: 69 E-------TPAPRVADAAPPAPKGPVQSAGEVEQASGVSVYRPDGSTAPDAPVIIRVPNT 121
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGI 182
T + P + RL L + +V A +G RIA++VSGLGI
Sbjct: 122 TQVKLAPAPDPRLTERGRHGPLPRLGEGRLRPLDVYA---RPDEPGTGPRIAVLVSGLGI 178
Query: 183 SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
+ T AI LPA ++LA + G+ L++ A++ G E +LQ+PM+ FD ++
Sbjct: 179 GENATLGAIARLPAAVSLALSPYGSDLEKTAARAREAGHEVLLQLPMEPFDYPDSDPGPQ 238
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
TL + + L+R +++ R G+ G +N+ GA L+S+ + E + K+ A RGL F DD
Sbjct: 239 TLLASSRPGENLDRTAWAMSRFPGFVGAVNFMGAKLMSDPTALEPVLKDLAARGLGFVDD 298
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
G++ + +A K LP AD+ +D D I +L LE +AR G + A A
Sbjct: 299 GAASASQVAGVAAKTKLPTARADIVVDAVARPDAIDAELARLETLARRNGLVLASASASP 358
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
SI+ +S+W + R + +VP+S + +
Sbjct: 359 LSIDRLSRWSRDLEARGIRLVPVSAVLRRP 388
>gi|70733871|ref|YP_257511.1| polysaccharide deacetylase family protein [Pseudomonas fluorescens
Pf-5]
gi|68348170|gb|AAY95776.1| polysaccharide deacetylase family protein [Pseudomonas fluorescens
Pf-5]
Length = 268
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 43/230 (18%), Positives = 102/230 (44%), Gaps = 7/230 (3%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A A +++++ LG + +R + LP +T A + + +EA + G+
Sbjct: 32 PTAAAPKAYLSLIIDDLGQNLPRDRRVLA-LPGPVTTAIMPDTPHAAEFAREAHRAGKIV 90
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
IL +PM + +++L RL + + G+ N+ G+ + + +
Sbjct: 91 ILHMPMDPAT------GPFAWHPELPIEELQKRLEAAFQAVPYTSGINNHMGSRMTAQPQ 144
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + +R F D +S + + A K+ L + D++LDD+ I ++L+
Sbjct: 145 AMAWLMADLQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFLDDERTEAAISQQLQT 204
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++AR G A+ + + +++ V+ + L + + + + + + L S
Sbjct: 205 AIKLARKQGSAVMIGHPYPQTLAVLERELPRLKAQGIEWIDIKSMISLRS 254
>gi|254420794|ref|ZP_05034518.1| Divergent polysaccharide deacetylase family [Brevundimonas sp.
BAL3]
gi|196186971|gb|EDX81947.1| Divergent polysaccharide deacetylase family [Brevundimonas sp.
BAL3]
Length = 396
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 82/361 (22%), Positives = 140/361 (38%), Gaps = 12/361 (3%)
Query: 31 LLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNT 90
L + ++++ + E AP P + + T
Sbjct: 41 LSGLFLLSATALFLTVLGDPRAGTPSARIALHREEAAPAPAPTGFEAFSMGAMGLYQDLT 100
Query: 91 VCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV 150
+ + G TV + S + + + + I GLS+ +
Sbjct: 101 GTGDPSGAAG--GEAVITLPDGATVAGGASYSAPVQAASPLAKAPIAGLSQPGASGPLPM 158
Query: 151 GREDTEVPA--MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNS 208
D VPA + F SN R+A++V GLG++ T+ AI LP +TL+F ++
Sbjct: 159 IAPDGRVPAQAYARPFRSNGK-PRVALIVGGLGLNAVTTRAAIERLPPEVTLSFVPYADN 217
Query: 209 LDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF 268
L W+ +A+ +G E +L++PM+ N+ YTL + T + ++ + L R GYF
Sbjct: 218 LQSWIDQARAQGHEVMLEMPMEPTGYPDNDPGPYTLLASGTPDDVQAKMDWLLGRAVGYF 277
Query: 269 GVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYL 328
GV NY G ++ +RG+ F DDGS R AD +
Sbjct: 278 GVTNYLGDRFATSDTGMSAFLSTLRQRGIAFLDDGSFQRRPGAWA-------RASADKVI 330
Query: 329 DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
D I L LE A+ G A+G ++ ++E ++W R + + P S +
Sbjct: 331 DQTQSPAAIIAALNSLEAQAKLRGSALGTGFSYPVTVEAAARWTAGLEQRGLQLAPASAM 390
Query: 389 A 389
Sbjct: 391 T 391
>gi|289649391|ref|ZP_06480734.1| yibQ gene product [Pseudomonas syringae pv. aesculi str. 2250]
Length = 260
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
PA D A +++++ LG + R + LP +TLA + + +E
Sbjct: 19 AAPAED---NGKPPKAYLSLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFARE 74
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + G+ +L +PM Y + +L +RL +L + G+ N+ G
Sbjct: 75 AHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHMG 128
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ + + + + E +R L F D +S + + A ++ L + D++LDD+ +
Sbjct: 129 SRMTAEPVAMAWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAE 188
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
I +L+ +IAR G A+ + + +++V+ + L + + V + L +
Sbjct: 189 AINRQLQSAIKIARKHGSAVVIGHPYPVTLDVLERELPKLKDQGVEWIDLRSMI 242
>gi|126665725|ref|ZP_01736706.1| hypothetical protein MELB17_04132 [Marinobacter sp. ELB17]
gi|126629659|gb|EBA00276.1| hypothetical protein MELB17_04132 [Marinobacter sp. ELB17]
Length = 281
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 100/254 (39%), Gaps = 3/254 (1%)
Query: 142 KELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA 201
K L+ + T + M N IAI++ +G + +R + L ITL+
Sbjct: 2 KPRLSNTSIRILLTMLVGMVSNIALAGPPPTIAIIIDDMGHDRLEGER-LARLEQPITLS 60
Query: 202 FASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSL 261
F K + +E +L PM + + L QL LR +L
Sbjct: 61 FLPYRRHTVELAKLSHSLNKEIMLHAPMA--NTQHFGLGPGGLTEDMDQAQLTRTLRRAL 118
Query: 262 RRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY 321
+ GV N+ G++L + + + E + L F D + ++ +A +P
Sbjct: 119 QSVPHVQGVNNHMGSLLTQRLQPMDWVMTELGQYPLYFVDSRTIASSIAGDVARAHRIPS 178
Query: 322 MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVS 381
D++LD + + + + K L + AR G AI + +++ + + L + ++
Sbjct: 179 FTRDVFLDHEQTEEFVDRQFKLLIQRARQQGTAIAIGHPHKITVDYLEKHLPLLDEQGIA 238
Query: 382 VVPLSCLAKLSSPS 395
+ +S + + + +
Sbjct: 239 IATVSGVWAIRNGN 252
>gi|28872442|ref|NP_795061.1| hypothetical protein PSPTO_5330 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213971178|ref|ZP_03399296.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301382306|ref|ZP_07230724.1| hypothetical protein PsyrptM_06718 [Pseudomonas syringae pv. tomato
Max13]
gi|302058523|ref|ZP_07250064.1| hypothetical protein PsyrptK_00941 [Pseudomonas syringae pv. tomato
K40]
gi|302132190|ref|ZP_07258180.1| hypothetical protein PsyrptN_12399 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28855697|gb|AAO58756.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213924047|gb|EEB57624.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 260
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A + S A +++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPVDHAEKTSKAYFTLIIDDLGQNPVRDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
EA + G+ IL +PM Y + +L +RL +L + G+ N+
Sbjct: 74 EAHRAGKTVILHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ ++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 188 EAITRQLQTAIKLAQKHGSAVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSMI 242
>gi|331017072|gb|EGH97128.1| hypothetical protein PLA106_13587 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 260
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 101/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A + S A + +++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPVDHAEKTSKAYLTLIIDDLGQNPVRDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
EA + G+ IL +PM Y + +L +RL +L + G+ N+
Sbjct: 74 EAHRAGKTVILHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRICLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ ++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 188 EAITRQLQTAIKLAQKHGSAVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSMI 242
>gi|90414915|ref|ZP_01222879.1| hypothetical protein P3TCK_22160 [Photobacterium profundum 3TCK]
gi|90323971|gb|EAS40567.1| hypothetical protein P3TCK_22160 [Photobacterium profundum 3TCK]
Length = 241
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
A++AI++ LG ++ LP +T++ N +AKK+ +E +L +P
Sbjct: 22 HAAQLAIIIDDLGY--QAMPELLSKLPPEVTISILPNTPYDLTVAAQAKKQHRETLLHMP 79
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M+ + E TL T + Q L + LR +L R + N+ G+ L N ++ I
Sbjct: 80 MEPEHLAPLEV--NTLTSTMSQQTLQHTLRQALTRVPDAIAINNHMGSALSQNIQAMGWI 137
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
E + L + D ++ +++ + A ++ + ++LD ++ + ++L + A
Sbjct: 138 MAELKQHNLYYLDSRTTAKSIAQQQATSHSVLSLRRHVFLDHYQTKEFVTKQLTSAIKRA 197
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+T G AI + ++ +++ L ++++V LS L
Sbjct: 198 KTYGYAIAIGHPHPITLSTLNELLPNLTEEEITLVRLSTL 237
>gi|330874211|gb|EGH08360.1| hypothetical protein PSYMP_06329 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 260
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 101/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A + S A + +++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPVDHAEKTSKAYLTLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
EA + G+ IL +PM Y + +L +RL +L + G+ N+
Sbjct: 74 EAHRAGKTVILHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ ++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 188 EAITRQLQTAIKLAQKQGSAVVIGHPYPVTLDVLERELPRLKAQGVEWIDLRSMI 242
>gi|302391080|ref|YP_003826900.1| hypothetical protein Acear_0286 [Acetohalobium arabaticum DSM 5501]
gi|302203157|gb|ADL11835.1| protein of unknown function DUF610 YibQ [Acetohalobium arabaticum
DSM 5501]
Length = 380
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 107/239 (44%), Gaps = 4/239 (1%)
Query: 153 EDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRW 212
+D E+ AR+A ++ LG ++ GT + + +T+A
Sbjct: 145 KDKELTLYHLKMTQPKVKARMAFIIDDLGFNRDGTAE-LMEIDRPLTVAVLPFRPYSTSD 203
Query: 213 MKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGT-GYFGVM 271
++A + G E +L +PM+ + +++ ++ L GV
Sbjct: 204 AEKAVQAGHEILLHLPMEPSS--PVSPGEGAIYTDMAPEEIRTTIQKGLASLGVEVAGVN 261
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ + ++ ++ V+ ++ L F D ++PR++ A ++ Y V L++D+
Sbjct: 262 NHMGSKVTADNKTMSVVLDYLHQQDLFFIDSSTAPRSVVPAAAREVGESYAVNHLFIDNI 321
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
D+++I ++++ L ++A G+ I + +I+ I + + + + + +V +S L K
Sbjct: 322 DDKERINKQIQYLADVALKQGELITIGHIKPNTIQAIKELIPKLEEKGIQLVYVSELVK 380
>gi|292486586|ref|YP_003529454.1| hypothetical protein EAMY_0096 [Erwinia amylovora CFBP1430]
gi|292897823|ref|YP_003537192.1| exported polysaccharide deacetylase [Erwinia amylovora ATCC 49946]
gi|291197671|emb|CBJ44766.1| putative exported polysaccharide deacetylase [Erwinia amylovora
ATCC 49946]
gi|291552001|emb|CBA19038.1| Uncharacterized protein yibQ precursor [Erwinia amylovora CFBP1430]
Length = 308
Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 90/219 (41%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+++IV+ G Q+ + +PA I++A + +A + G E ++ +PM
Sbjct: 24 KLSIVIDDFGYRPAQEQQVLQ-MPAAISVAVLPHAPHAREMATKAHQSGHEVLIHLPMAP 82
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ E D TL+ + +++ +R + G+ N+ G+ + S+ + + +
Sbjct: 83 LSKQPLEKD--TLRPDMSTEEIGRIIREAAAAVPYAVGLNNHMGSAMTSSLPGMQKVMRV 140
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
F D + + A ++ + ++LDD + IR + +A+
Sbjct: 141 LNHYQFYFLDSMTIGNSQATRAAAGTSVKVVKRRVFLDDSQNEADIRVQFTRAVRLAQRD 200
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + ++ V+ Q L DV++V S L
Sbjct: 201 GSAIAIGHPHPSTVRVLQQMLTTLPA-DVTLVRPSQLLN 238
>gi|315648451|ref|ZP_07901550.1| divergent polysaccharide deacetylase [Paenibacillus vortex V453]
gi|315276145|gb|EFU39491.1| divergent polysaccharide deacetylase [Paenibacillus vortex V453]
Length = 295
Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 44/225 (19%), Positives = 98/225 (43%), Gaps = 5/225 (2%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++A+++ G Q GTQ ++ LP IT+A + + + A K G + I+ +PM+
Sbjct: 63 KLAVIIDDFGNGQKGTQEMLS-LPVKITVAVMPFLPTSKKDAESAHKMGHDVIIHMPMEP 121
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + + T +++ R+ ++ G+ N+ G+ + ++ ++
Sbjct: 122 KQGRASWLGPGAILSSLTDEEIRKRMEEAIDSVPYAIGINNHMGSKVTGDERIMSIVLDV 181
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+RGL F D ++ R++ LA + +P + D++LDD + ++L + A
Sbjct: 182 CKERGLFFMDSKTNYRSVVGKLAAEKGMPAIANDIFLDDVHTVQHVSKQLVTAAQHAEER 241
Query: 352 GQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I + + E + + + + V V +S L + S
Sbjct: 242 TSCIAIGHVGVFGTRTAEALKVSIPELQKK-VEFVGISDLVRERS 285
>gi|259906778|ref|YP_002647134.1| hypothetical protein YigQ [Erwinia pyrifoliae Ep1/96]
gi|224962400|emb|CAX53855.1| conserved uncharacterized protein YigQ [Erwinia pyrifoliae Ep1/96]
gi|283476564|emb|CAY72392.1| Uncharacterized protein yibQ precursor [Erwinia pyrifoliae DSM
12163]
Length = 304
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 4/232 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
S A +++IV+ G Q+ + +PA I++A N +A + G E
Sbjct: 15 AIASPAWAGKLSIVIDDFGYRPALEQQVLQ-MPAAISVAVLPNAPHAREMATKAHQSGHE 73
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ +++ +R + G+ N+ G+ + S+
Sbjct: 74 VLIHLPMAPLSKQPLEKD--TLRPDMPTEEIGRIIREAAAAVPYAVGLNNHMGSAMTSSL 131
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + F D + + A N+ + ++LDD + IR +
Sbjct: 132 PAMQKVMQILNHYHFYFLDSMTIGNSQATRAAEGTNVKVVKRWVFLDDSQNEADIRVQFT 191
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+A+ G AI + ++ V+ Q L D+ + S L + P
Sbjct: 192 RAVRLAQRDGSAIAIGHPHPSTVRVLQQMLPGLPA-DIILERPSQLLNATQP 242
>gi|330961870|gb|EGH62130.1| hypothetical protein PMA4326_25287 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 258
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 43/223 (19%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ A +++++ LG + R + LP +TLA + + ++A + G+ +L
Sbjct: 27 KPAKAYLSLIIDDLGQNPERDSRTLA-LPGPVTLAIMPDTPHATDFARQAHRAGKTVMLH 85
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PM Y + +L +RL +L + G+ N+ G+ + + +
Sbjct: 86 MPMDPAT------GPYAWHPELPLAELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMA 139
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E +R L F D +S + + A + L + D++LDD+ + I +L+ +
Sbjct: 140 WLMAELQRRHLFFVDSRTSAKTVAAAEAQRAGLASVSRDVFLDDERTAEAITRQLQTAVK 199
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+A G A+ + + +++V+ + L + + V + L +
Sbjct: 200 LAHKQGSAVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSMI 242
>gi|192359430|ref|YP_001984003.1| Divergent polysaccharide deacetylase family [Cellvibrio japonicus
Ueda107]
gi|190685595|gb|ACE83273.1| Divergent polysaccharide deacetylase family [Cellvibrio japonicus
Ueda107]
Length = 290
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 3/227 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
++AI++ +G + +RA L + TLA + A ++G+E +L P
Sbjct: 33 QAGQLAIIIDDIGYNLDAGRRA-ADLSGDYTLAVLPFTPHGRELAERAYRRGKEIMLHAP 91
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
M +E + L+ + + L L +L GV N+ G+ L +E +
Sbjct: 92 MS--NEQHLPLGKGGLESGMSRETFLQVLERNLADIPHVRGVNNHTGSQLTQEEEPMRWL 149
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
E +RGL F D ++ + + +A LP D++LDD+ + + +L+ A
Sbjct: 150 MAELKQRGLYFVDSRTTAKTRAQAMAEAAGLPNRKRDVFLDDRPEPAHVASQLELAMATA 209
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
R G A+ + + ++ + + +++V S L S PS
Sbjct: 210 RRQGSAVAIGHPYPSTLAALEKIAPLLEKYAITLVKASLLMPSSRPS 256
>gi|26991735|ref|NP_747160.1| hypothetical protein PP_5059 [Pseudomonas putida KT2440]
gi|148550134|ref|YP_001270236.1| hypothetical protein Pput_4932 [Pseudomonas putida F1]
gi|24986840|gb|AAN70624.1|AE016705_4 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148514192|gb|ABQ81052.1| protein of unknown function DUF610, YibQ [Pseudomonas putida F1]
Length = 255
Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 99/230 (43%), Gaps = 7/230 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A+ A ++I++ LG S R + LP +T+A + + ++A K G+
Sbjct: 16 AQAAPANKAYMSIIIDDLGQSPERDSRTLA-LPGPVTMAIMPDTPHATDFARQAHKAGKT 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y + ++L RL +L + G+ N+ G+ + + +
Sbjct: 75 VILHMPMDPATGPYAWHPGIAI------EELARRLDAALVKVPYAAGINNHMGSRMTAQR 128
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + E +R L F D +S + A ++ ++ D++LDD + I +L+
Sbjct: 129 EPMAWLMGELQRRHLFFVDSRTSAATVAAAEAQAHDVAHVSRDVFLDDVRTPEAIDAQLQ 188
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+AR G A+ + + +++ V+ + + + +V L +
Sbjct: 189 QGIALARKQGSAVLIGHPYPQTLAVLESQIPRLKQLGIELVTLQQMIATR 238
>gi|222055713|ref|YP_002538075.1| protein of unknown function DUF610 YibQ [Geobacter sp. FRC-32]
gi|221565002|gb|ACM20974.1| protein of unknown function DUF610 YibQ [Geobacter sp. FRC-32]
Length = 314
Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 130 TIEERLILGLSKKELLAKNKV--GREDTEVPAMDKNFCSNASGAR------IAIVVSGLG 181
++ + ++++ A+ G+ D A + + +AI++ +G
Sbjct: 47 PGKQERQGSVERQKMPARPAAKPGKHDIYTAAKARPVPQARTRPHLTGPGTVAIIIDDMG 106
Query: 182 ISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDS 241
S T ++ + IT A + A +G E ++ IPM+ + +
Sbjct: 107 RS-TREADSLLAINLPITFAIIPGYAKARAVAEIAHGRGGEVMVHIPMEPQGYPEKKMEK 165
Query: 242 YTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFD 301
L + ++ +Q+ ++++ L+ G N+ G+ ++E + + + ++GL F D
Sbjct: 166 NGLLLGESNEQIASKVKGYLQEIPYAVGANNHMGSRFTESEEKMQPVLQILQEKGLFFVD 225
Query: 302 DGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAF 361
+SP++ LA K+ L ++LD+ + I +L+ + + AR G AI +
Sbjct: 226 SMTSPKSAGFRLARKMGLKSGTRQVFLDNVQNVQAINAQLQQVADAARRRGSAIAICHPH 285
Query: 362 DESIEVISQWLQQEHVRDVSVVPLSCLA 389
+I+ +S + Q + ++ V S +
Sbjct: 286 RTTIQALSGMMPQLKKQGITFVYASQIV 313
>gi|197117641|ref|YP_002138068.1| divergent polysaccharide deacetylase domain-containing protein
[Geobacter bemidjiensis Bem]
gi|197087001|gb|ACH38272.1| divergent polysaccharide deacetylase domain protein [Geobacter
bemidjiensis Bem]
Length = 317
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 98/274 (35%), Gaps = 2/274 (0%)
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA-RIAI 175
+P + L L + + + P A G R+AI
Sbjct: 44 KEPAPAAPAKVEAPAVTSPHLPLPEHAKPVQQNLSTAQAPAPKPHVAVVPRAHGPGRVAI 103
Query: 176 VVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
++ +G S Q + + IT + + + A G E ++ +PM+
Sbjct: 104 IIDDMGSSMQELQ-TLQSIGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEGYP 162
Query: 236 YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR 295
+ +S L VT ++ R+ R G N+ G+ + + E ++
Sbjct: 163 KQKMESIGLLVTMDDAEIAKRVSDYFSRVPHAVGANNHMGSRFTQHADKMEAALGVLKEK 222
Query: 296 GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAI 355
G+ F D +SP ++ A L + ++LD+ D I ++L +AR G AI
Sbjct: 223 GVFFIDSRTSPASVGYQTARALGIKAGTRQVFLDNVQDEGAIGKQLLEAAAVARKRGGAI 282
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ ++ + +L + ++ V S L
Sbjct: 283 AICHPHPATLRALKAYLPELAKTGITFVYASALT 316
>gi|319652983|ref|ZP_08007088.1| hypothetical protein HMPREF1013_03703 [Bacillus sp. 2_A_57_CT2]
gi|317395332|gb|EFV76065.1| hypothetical protein HMPREF1013_03703 [Bacillus sp. 2_A_57_CT2]
Length = 257
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 99/230 (43%), Gaps = 5/230 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ + +AIV+ LG + GT + LP +T+A + + A + G E
Sbjct: 20 SISAAPLKPELAIVIDDLGNNMKGTAEMME-LPVTLTVAIMPFMPTTKEDAELASENGHE 78
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + T +++ +R+ +++ G+ ++ G+ N+
Sbjct: 79 VIVHMPMEPKRGKRSWLGPGAITTDLTDEEIRSRVESAIKEVPHAVGMNHHMGSRATENE 138
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
++ K + GL + D ++ +++ LA ++ +PY+ +++ DD I ++
Sbjct: 139 RVMRIVLKVCKEHGLFYLDSKTTGKSVVGKLAKEIGVPYVENNIFFDDIYTTAHITKQAD 198
Query: 343 GLEEIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLA 389
L E + I + + + V+ +++ + +VPLS L
Sbjct: 199 RLAEKLVKNERIIAIGHVGITGTKMVNVLKEYIP-VYKEKAEIVPLSELI 247
>gi|289624111|ref|ZP_06457065.1| yibQ gene product [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330868929|gb|EGH03638.1| YibO protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 260
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 101/234 (43%), Gaps = 10/234 (4%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
PA D A +++++ LG + R + LP +TLA + + +E
Sbjct: 19 AAPAED---NGKPPKAYLSLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFARE 74
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + + +L +PM Y + +L +RL +L + G+ N+ G
Sbjct: 75 AHRAAKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHMG 128
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ + + + + E +R L F D +S + + A ++ L + D++LDD+ +
Sbjct: 129 SRMTAEPVAMAWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAE 188
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
I +L+ +IAR G A+ + + +++V+ + L + + V + L +
Sbjct: 189 AINRQLQSAIKIARKHGSAVVIGHPYPVTLDVLERELPKLKDQGVEWIDLRSMI 242
>gi|254788252|ref|YP_003075681.1| polysaccharide deacetylase family protein [Teredinibacter turnerae
T7901]
gi|237685753|gb|ACR13017.1| polysaccharide deacetylase family protein [Teredinibacter turnerae
T7901]
Length = 275
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 4/228 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A+ +AI++ LG + I LP +T A + A G+E ++
Sbjct: 41 ANAPEVAIIIDDLGYKRKLGTE-ILALPWPLTAAIIPFTPYATTLAESAHVAGKEVMVHA 99
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ E L ++Q + R L G+ N+ G+ L ++ +
Sbjct: 100 PMEPVAPRPWEQG---LAISQDETEFRERCGAMLDAVPYAVGLNNHGGSRLTASSDHMHW 156
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ E + F D +S ++ +A + L +++LD+ D + I +L LE I
Sbjct: 157 LMAELDAKRFYFIDSRTSADSIAEDIAQTMGLATASRNVFLDNTRDPEAILAQLGKLETI 216
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
AR G AIG+ + E+++ + L R +++VP+S L S +
Sbjct: 217 ARQHGYAIGIGHPYPETLQALQLGLGAMANRGITLVPVSRLLAQKSAA 264
>gi|224368263|ref|YP_002602426.1| hypothetical protein HRM2_11500 [Desulfobacterium autotrophicum
HRM2]
gi|223690979|gb|ACN14262.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 349
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 76/336 (22%), Positives = 132/336 (39%), Gaps = 34/336 (10%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
M RE AP+ T P E + SK+ V
Sbjct: 47 MGRPVAKREAAPVARTTPDRPEPEPVQSKKR---------------------------VS 79
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
KP S D T + + + K E VP + ++ R+AI+
Sbjct: 80 IKPEPSRKPDKKATTSRKHPVFEVFDDSDETPKQRPEPAAVPPVLQD-----KTPRVAII 134
Query: 177 VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESY 236
+ +G + + AI+ L +ITL+ ++G E +L +PM+ +
Sbjct: 135 IDDIGFDKKISL-AISGLDPHITLSILPYAPHAKAIALLLHQRGTETLLHLPMEPMEYPK 193
Query: 237 NEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRG 296
+ L T T +LL++LR L GV N+ G+ + S IF +R
Sbjct: 194 IDPGPGALLSTMTPDELLDQLRLDLDIIPFVAGVNNHMGSRMTSLSPQMNQIFTVLKQRN 253
Query: 297 LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIG 356
L F D ++ +L R A L +P+ D++LD+ D D I+++L L +A+ G AIG
Sbjct: 254 LFFIDSLTAKGSLCRQSARLLRIPFAQRDVFLDNVQDADYIKKQLAQLLAVAQRHGTAIG 313
Query: 357 VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+ + + + +++ + + +VP S L +
Sbjct: 314 IGHPYRATYLTLKSEMERLKKK-IRIVPASALVAIP 348
>gi|330891664|gb|EGH24325.1| YibO protein [Pseudomonas syringae pv. mori str. 301020]
Length = 260
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 10/234 (4%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
PA D A + +++ LG + R + LP +TLA + + +E
Sbjct: 19 AAPAED---NGKPPKAYLNLIIDDLGQNPARDSRTLA-LPGPVTLAIMPDTPHATEFARE 74
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A + G+ +L +PM Y + +L +RL +L + G+ N+ G
Sbjct: 75 AHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHMG 128
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ + + + + E + L F D +S + + A ++ L + D++LDD+ +
Sbjct: 129 SRMTAEPVAMAWLMAELQRCHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAE 188
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
I +L+ +IAR G A+ + + +++V+ + L + + V + L +
Sbjct: 189 AINRQLQSAIKIARKHGSAVVIGHPYPVTLDVLERELPKLKDQGVEWIDLRSMI 242
>gi|228990430|ref|ZP_04150395.1| hypothetical protein bpmyx0001_11920 [Bacillus pseudomycoides DSM
12442]
gi|228768956|gb|EEM17554.1| hypothetical protein bpmyx0001_11920 [Bacillus pseudomycoides DSM
12442]
Length = 255
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F + A ++AIV+ G + GT+R ++ LP +T+A S + A +KG E
Sbjct: 18 PFQTYAHTNKVAIVIDDFGNNMKGTERMLS-LPIPLTVAVMPFLPSTKQDAVAAHQKGHE 76
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + ++ +R+ +++ G+ N+ G+ + +++
Sbjct: 77 VIIHMPMEPIKGKKEWLGPKAITTDLSDHEIESRVEQAIQEVPHAIGMNNHMGSKVTADE 136
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K GL + D ++P ++ + +L +P + L+ DD I ++ +
Sbjct: 137 RIMRIILSVCKKHGLFYLDSKTNPNSVVPKIGKELGVPIVENQLFFDDVYTSSHITKQAQ 196
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
L + + + + + + VI + + + LS L P S
Sbjct: 197 LLLQKIKEKPVVVAIGHVGPPGEITSRVIESTIPKVREHA-DFIFLSDLVLSPPPVS 252
>gi|317153225|ref|YP_004121273.1| hypothetical protein Daes_1513 [Desulfovibrio aespoeensis Aspo-2]
gi|316943476|gb|ADU62527.1| protein of unknown function DUF610 YibQ [Desulfovibrio aespoeensis
Aspo-2]
Length = 413
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
G +AIV+ +G + IN L +TLA N + ++ + G++ I+
Sbjct: 190 PTGKGPMLAIVIDDIGEDLHVLKGLIN-LNFPVTLAVWPNASQSRESVRLIQASGRDLII 248
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
PM+ S L T + + + R+ S+ R GV N+ G+ ++
Sbjct: 249 HFPMEPMGYPAYNPGSDALFTTMSEEAIRKRVADSVARIPEAIGVNNHMGSKFTAHTPGM 308
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
EF +RGL F D +S R++ R +A + P+ D++LD+ D I +L+ E
Sbjct: 309 TTALSEFRQRGLFFLDSLTSARSVARSVARQTGTPFYQRDIFLDNVKDVSAITLQLRKAE 368
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A G AI + + E++ + W + ++ V+PLS L
Sbjct: 369 NVALKNGVAIAIGHPYPETLAALKSWHAR-KNPNIRVLPLSLL 410
>gi|188532247|ref|YP_001906044.1| Putative periplasmic protein of unknown function [Erwinia
tasmaniensis Et1/99]
gi|188027289|emb|CAO95132.1| Putative periplasmic protein of unknown function [Erwinia
tasmaniensis Et1/99]
Length = 310
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 7/239 (2%)
Query: 160 MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
M S A ++IV+ G T Q+ + +PA I++A N +A +
Sbjct: 14 MAIAITSPAWAGNLSIVIDDFGYRPTQEQQVLQ-MPAAISVAVLPNAPHAREMATKAHQS 72
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
G E ++ +PM + E D TL+ + +++ +R + G+ N+ G+ +
Sbjct: 73 GHEVLIHLPMAPLSKQPLEKD--TLRPDMSAEEIARIIREAAAAVPYAVGLNNHMGSAMT 130
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
S+ + + + + F D + + A + + ++LDD + IR
Sbjct: 131 SSLPGMQKVMQVLSHYNFYFLDSMTIGNSQASRAAAGTGVKVVKRRVFLDDSQNEADIRV 190
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL---AKLSSPS 395
+ +A+ G AI + ++ V+ Q L D+++V S L A+L +P+
Sbjct: 191 QFARAVHLAQRDGSAIAIGHPHPSTVRVLQQMLPTLPA-DITLVRPSQLLNEAQLVNPA 248
>gi|109899910|ref|YP_663165.1| protein of unknown function DUF610, YibQ [Pseudoalteromonas
atlantica T6c]
gi|109702191|gb|ABG42111.1| protein of unknown function DUF610, YibQ [Pseudoalteromonas
atlantica T6c]
Length = 255
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A A+IAI++ +G + A+ LP N+ ++ + + ++ A ++ +E
Sbjct: 19 PTSAALSAQIAIIIDDVGNNSHRDAAALG-LPINVAISILPHKHLSQKYALMAHEQHREF 77
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+L +PM++ E S L + + ++++ L + G+ N+ G+ L +
Sbjct: 78 LLHMPMESMAGIKQE--SNVLLASMSDKRIVQTLNDAFASVPNALGLNNHMGSRLTQLET 135
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ GL+F D ++ +A + +P + ++LD+ + KI +
Sbjct: 136 PMRTTMSYLHRHGLIFVDSRTTALTRAEAIAKQTKVPALRRHVFLDNDLSEAKIERQFNI 195
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
L + AR G+++ + ++I + + L DV ++PLS +
Sbjct: 196 LVKRARKYGRSLAIGHPHMQTIAYLKKRLPTLAQDDVQLIPLSAML 241
>gi|228996531|ref|ZP_04156170.1| hypothetical protein bmyco0003_11180 [Bacillus mycoides Rock3-17]
gi|229004182|ref|ZP_04161983.1| hypothetical protein bmyco0002_11470 [Bacillus mycoides Rock1-4]
gi|228757043|gb|EEM06287.1| hypothetical protein bmyco0002_11470 [Bacillus mycoides Rock1-4]
gi|228763163|gb|EEM12071.1| hypothetical protein bmyco0003_11180 [Bacillus mycoides Rock3-17]
Length = 255
Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats.
Identities = 45/237 (18%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F + A ++AIV+ G + GT+R ++ LP +T+A S + A +KG E
Sbjct: 18 PFQTYAHTNKVAIVIDDFGNNMKGTERMLS-LPIPLTVAVMPFLPSTKQDAVAAHQKGHE 76
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + ++ +R+ +++ G+ N+ G+ + +++
Sbjct: 77 VIIHMPMEPIKGKKEWLGPKAITTDLSDHEIESRVEQAIQEVPHAIGMNNHMGSKVTADE 136
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K GL + D ++P ++ + +L +P + L+ DD I ++ +
Sbjct: 137 RIMRIILSVCKKHGLFYLDSKTNPNSIVPKIGKELGVPIVENQLFFDDVYTSSHITKQAQ 196
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
L + + + + + + VI + + + LS L P S
Sbjct: 197 LLLQKIKEKPVVVAIGHVGPPGEITSRVIESTIPKVREHA-DFIFLSDLVLSPPPVS 252
>gi|312958445|ref|ZP_07772965.1| protein of unknown function DUF610 [Pseudomonas fluorescens WH6]
gi|311286988|gb|EFQ65549.1| protein of unknown function DUF610 [Pseudomonas fluorescens WH6]
Length = 257
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 44/231 (19%), Positives = 95/231 (41%), Gaps = 7/231 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
A + +++ LG + +R + LP +T A + + +EA K G+
Sbjct: 20 TPAGEPHKAYLTLIIDDLGQNLPRDRRVLA-LPGPVTTAIMPDTPHAAEFAREAHKAGKI 78
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM + +V+ L RL + G+ N+ G+ + +
Sbjct: 79 VILHMPMDPAT------GPFAWHPELSVEDLGKRLDAAFTAVPYTAGINNHMGSRMTAQP 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R F D +S + + A K+ L + D++LDD+ I +L+
Sbjct: 133 AAMAWLMAELQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFLDDERTEAAITTQLQ 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++A G A+ + + +++ V+ + L + + V + + + + S
Sbjct: 193 TAIKLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGVEWIDIKLMISVRS 243
>gi|330967509|gb|EGH67769.1| hypothetical protein PSYAC_23214 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 260
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 47/235 (20%), Positives = 101/235 (42%), Gaps = 7/235 (2%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A + S A + +++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPVDHAEKPSKAYLTLIIDDLGQNPVRDSRTLA-LPGPVTLAIMPDTPHATDFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
EA + G+ IL +PM Y + +L +RL +L + G+ N+
Sbjct: 74 EAHRAGKTVILHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 128 GSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTA 187
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ ++A+ G A+ + + +++V+ + L + + V + L +
Sbjct: 188 EAITRQLQTAIKLAQKQGSAVVIGHPYPVTLDVLERELPRLKAQSVEWIDLRSMI 242
>gi|323137511|ref|ZP_08072588.1| protein of unknown function DUF610 YibQ [Methylocystis sp. ATCC
49242]
gi|322397137|gb|EFX99661.1| protein of unknown function DUF610 YibQ [Methylocystis sp. ATCC
49242]
Length = 413
Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 99/394 (25%), Positives = 167/394 (42%), Gaps = 9/394 (2%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M+ +LN PL + K ++ G I L++Y+ G +
Sbjct: 1 MTDELNAPLGSGASRPKPAVAKPRRAFGAAAGGLVAIGALALYLA-PRDPYGGEPHAVAR 59
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSK-----RDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
+ +P R+ + ++ + S + G
Sbjct: 60 IEPAKAPEPAPPLPPVAVAAAGEPAPPPAGREQISTVSEFEQLSGVKVTRSGASEGGTAR 119
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD--KNFCSNASGARI 173
+ + + + P + R++ L G +V A A RI
Sbjct: 120 IIRIEPPSGVRLTPAPDRRVVEKGRYGLLPKIGADGARPMDVYARPFVTAPSLKADAPRI 179
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
A+V+ GLG++ + AI+ LP +TLAFA G LDR + A+ +G EA+LQ PM+ FD
Sbjct: 180 ALVIGGLGLNAATSADAIDQLPEGVTLAFAPYGAELDRLVASARARGHEALLQAPMEPFD 239
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
N +TL + L++ + R +GY GVMNY G +++++ E A
Sbjct: 240 YPQNNPGPHTLVTG-APDGGADDLQWLMSRFSGYAGVMNYLGGRYTADEQALSGALAEIA 298
Query: 294 KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQ 353
+RGL F DD ++P++L LAPK +LP+ D+ +D + I L LE AR G
Sbjct: 299 QRGLFFLDDRAAPQSLITALAPKFSLPHAKVDVVIDARNTPQSIDAALAQLETQARDKGV 358
Query: 354 AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
AIG A A +I ++++ + R +++ P+S
Sbjct: 359 AIGFANAVPATISRVARFARDLERRGIALAPVSA 392
>gi|85710828|ref|ZP_01041889.1| hypothetical protein OS145_02335 [Idiomarina baltica OS145]
gi|85695232|gb|EAQ33169.1| hypothetical protein OS145_02335 [Idiomarina baltica OS145]
Length = 235
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 2/200 (1%)
Query: 190 AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
A LP +IT A + +A +G++ + +PMQA + L +
Sbjct: 22 AAADLPGDITFAILPFTPYGRSFALKAHHQGKQIMAHVPMQALAGNALGLG--ALTADMS 79
Query: 250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNL 309
++ +LR L G+ N+ G+ L + + + + L F D ++ +
Sbjct: 80 SAEIKLKLRQVLDDIPYVAGINNHMGSQLTQLTQPMQAVMESLKNHDLYFIDSRTTEYTV 139
Query: 310 TRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVIS 369
+A +P +++D++ D + E+ L +IA G AI + + E+I+ +
Sbjct: 140 AEKMAQSYQVPVARRHVFIDNETDEQYLTEQFDELIQIAHAHGSAIAIGHPYPETIKFLK 199
Query: 370 QWLQQEHVRDVSVVPLSCLA 389
Q L+ DV +V S L
Sbjct: 200 QRLKSLKEDDVQLVFASELT 219
>gi|253701628|ref|YP_003022817.1| hypothetical protein GM21_3030 [Geobacter sp. M21]
gi|251776478|gb|ACT19059.1| protein of unknown function DUF610 YibQ [Geobacter sp. M21]
Length = 316
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 99/272 (36%), Gaps = 2/272 (0%)
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVV 177
P +++ L + K + K + P ++ G R+AI++
Sbjct: 46 APAAPAKVEAPAVTSPHLPIPEHAKPVQQKLSTAQVPAPKPHAAALPKAHGPG-RVAIII 104
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
+G S Q + + IT + + + A G E ++ +PM+
Sbjct: 105 DDMGSSMQELQ-TLQSIGLPITYSIIPSLPRARQVADSAHAAGAEVMVHMPMEPEGYPKQ 163
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ +S L V ++ R+ R G N+ G+ + + E ++G+
Sbjct: 164 KMESIGLLVAMDDAEIAKRVSGYFSRVPHAVGANNHMGSRFTQHGDKMEAALGVLKEKGV 223
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
F D +SP ++ A L + ++LD+ D I +L +AR G AI +
Sbjct: 224 FFIDSRTSPASVGYRTARALGMKAGTRQVFLDNVQDEGAIGRQLFEAAAVARKRGGAIAI 283
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++ + +L + ++ V S L
Sbjct: 284 CHPHPATLRALKAYLPELAKTGITFVYASALT 315
>gi|240138873|ref|YP_002963348.1| hypothetical protein MexAM1_META1p2287 [Methylobacterium extorquens
AM1]
gi|240008845|gb|ACS40071.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 409
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 98/393 (24%), Positives = 171/393 (43%), Gaps = 8/393 (2%)
Query: 5 LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
L PL + ++ S + + L+ I ++ G IR
Sbjct: 17 LTKPLGVADKAARPRFALRPSAGAAAGVGALVVALLAGGIALTGDPRGGEPRAQALIEIR 76
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT-VVNKPTRST 123
E AP + I D P+ + ++++ S + + V+ + +
Sbjct: 77 E-APASV---PRIADAAPPAAKGPAQSASEVEQASGVSVFRPDGSTAPDAPVIIRVPNAA 132
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
+ P + RL L + +V A +G RIA++VSGLGI
Sbjct: 133 QVKLAPAPDARLTERGRHGPLPRIGEGRLRPLDVYA---RPDEPGTGPRIAVLVSGLGIG 189
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
+ T AI LPA ++LA + G L++ A++ G E +LQ+PM+ FD ++ T
Sbjct: 190 EMATLGAIARLPAAVSLALSPYGTDLEKTATRAREAGHEILLQLPMEPFDYPDSDPGPQT 249
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
L + + L+R +++ R G+ G +N+ GA L+S + E + K+ + RGL F DDG
Sbjct: 250 LLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPVLKDLSARGLGFVDDG 309
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDE 363
++P +A K LP A++ +D D I +L LE +AR G + + A
Sbjct: 310 AAPGTQVATVAAKTKLPSARAEIVIDAVARPDAIDAELARLETLARQKGLVLASSSASPL 369
Query: 364 SIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+IE +S+W + R + +VP+S + + S
Sbjct: 370 TIERLSRWSRDLEARGIRLVPVSAILRRPGGVS 402
>gi|114321714|ref|YP_743397.1| protein of unknown function DUF610, YibQ [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228108|gb|ABI57907.1| protein of unknown function DUF610, YibQ [Alkalilimnicola ehrlichii
MLHE-1]
Length = 264
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 4/221 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+A+V+ LG QR ++ LP +T + + R + + G+E +L +PMQA
Sbjct: 38 RVAVVIDDLGDHLASGQRTVD-LPGPVTCSVLPHTPHARRLAEACHRSGKEVMLHMPMQA 96
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + + + +T + +R L GV N+ G++ + + +
Sbjct: 97 KNGADRGPGGVDIHMDRTAVEAA--VRKDLDAVPHARGVNNHMGSLYTRHPGNLRWVMDA 154
Query: 292 FAKRG-LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
G F D ++ R++ +A + +P ++LD D + IR L+ L AR
Sbjct: 155 LRGEGDYYFVDSRTTARSVAEQVAREAGVPATRRHVFLDHDRDPEMIRHHLERLVRHARR 214
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
G + + + E++ V+ + L + + +VP S L +L
Sbjct: 215 HGYGLAIGHPYPETLAVLEEVLPEWARAGIKLVPASRLVEL 255
>gi|114571337|ref|YP_758017.1| hypothetical protein Mmar10_2797 [Maricaulis maris MCS10]
gi|114341799|gb|ABI67079.1| protein of unknown function DUF610, YibQ [Maricaulis maris MCS10]
Length = 445
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 92/397 (23%), Positives = 163/397 (41%), Gaps = 10/397 (2%)
Query: 6 NHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIRE 65
+ LR P + + L + I G++++ A I + P V +
Sbjct: 3 SAILRHAQPLLTLRAP-LFAGLAAAAMLSLMIGGVALFGNGDIALPRAIGGVQPAPVEEQ 61
Query: 66 IAP-IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ------NDISGKTVVNK 118
+A + + + + V + + +
Sbjct: 62 VASDMRGDTGDHGAAIRFLEPEGDGEVSLSGVREDFHAPAAATSREIAADTSGSDPADAE 121
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP--AMDKNFCSNASGARIAIV 176
+ + + + + I+GL++ V + P A + + + IA+V
Sbjct: 122 ARVAAAATNPNALAQAPIVGLTEPGPGGPLPVIAANGTRPSRAYARPYHGDPGAPTIAVV 181
Query: 177 VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESY 236
V G+G++ T TQ AI+ LP + L+FA+ L W+ A+ G E +++ PM+ FD
Sbjct: 182 VGGMGLNSTVTQAAIDELPPEVALSFAAYARDLQVWIDRARAAGHEVLIEAPMEPFDYPN 241
Query: 237 NEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRG 296
N+ +TL T ++ RL + L R TGYFGV NY GA +++++ +F RG
Sbjct: 242 NDPGPHTLLADGTAEENSRRLAWVLSRATGYFGVTNYLGARFSASQDAMRQVFGTLEGRG 301
Query: 297 LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIG 356
+ F DG+ R+ A ++ Y VAD LD+ + D I E+L LE +A G A+G
Sbjct: 302 VAFLHDGAGRRSTIEAAAGATDIEYAVADRILDEDLSPDAIDERLLALEALAIQNGSALG 361
Query: 357 VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
A+ ++E I W +R + P S +
Sbjct: 362 TGFAYPATVEQIRDWAVSLDLRGYQLAPPSAVMARRR 398
>gi|170718741|ref|YP_001783929.1| protein of unknown function DUF610 YibQ [Haemophilus somnus 2336]
gi|168826870|gb|ACA32241.1| protein of unknown function DUF610 YibQ [Haemophilus somnus 2336]
Length = 285
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G I LP +++A + + ++AK++ ++ ++ +PMQ
Sbjct: 32 KLAIVIDDIGYRLK-EDNQIYSLPKEVSVAIIPSAPHAKQRDQQAKQQNRDILIHLPMQP 90
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
++ ED +K+ + ++ R+R + G+ N+ G+ ++K+ +
Sbjct: 91 LNQQKIEDGG--IKLGMSQPEVYQRVRNAKSILPNAIGMNNHMGSAATADKDLMNKLMTA 148
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + R++ +A + +P + ++LDD ++ + + AR
Sbjct: 149 LLQQNLFFLDSRTIGRSVAGKIAREFGIPTLERHIFLDDSDKLSDVQRQWNAAIQYARKR 208
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ ++Q +D+ +V + L +
Sbjct: 209 GTAIVIGHPRKNTIAVLQMGIKQLP-KDIQLVGIGSLWR 246
>gi|254561481|ref|YP_003068576.1| hypothetical protein METDI3068 [Methylobacterium extorquens DM4]
gi|254268759|emb|CAX24720.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 409
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 98/393 (24%), Positives = 172/393 (43%), Gaps = 8/393 (2%)
Query: 5 LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
L PL + ++ S + + L+ I ++ G IR
Sbjct: 17 LTKPLGVADKAARPRFALRPSAGAAAGVGALVVALLAGGIALTGDPRGGEPRAQALIEIR 76
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT-VVNKPTRST 123
E AP + I + P+ + ++++ S + + V+ + +T
Sbjct: 77 E-APASV---PRIAEAAPPAAKGPAQSASEVEQASGVSVFRPDGSTAPDAPVIIRVPNAT 132
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
+ P + RL L + +V A +G RIA++VSGLGI
Sbjct: 133 QVKLAPAPDARLTERGRHGPLPRIGEGRLRPLDVYA---RPDEPGTGPRIAVLVSGLGIG 189
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
+ T AI LPA ++LA + G L++ A++ G E +LQ+PM+ FD ++ T
Sbjct: 190 EMATLGAIARLPAAVSLALSPYGTDLEKTAARAREAGHEILLQLPMEPFDYPDSDPGPQT 249
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
L + + L+R +++ R G+ G +N+ GA L+S + E + K+ + RGL F DDG
Sbjct: 250 LLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPVLKDLSARGLGFVDDG 309
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDE 363
++P +A K LP A++ +D D I +L LE +AR G + + A
Sbjct: 310 AAPGTQVATVAAKSKLPSARAEIVIDAVARPDAIDAELARLETLARQKGLVLASSSASPL 369
Query: 364 SIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+IE +S+W + R + +VP+S + + S
Sbjct: 370 TIERLSRWSRDLEARGIRLVPVSAILRRPGGVS 402
>gi|170719593|ref|YP_001747281.1| hypothetical protein PputW619_0406 [Pseudomonas putida W619]
gi|169757596|gb|ACA70912.1| protein of unknown function DUF610 YibQ [Pseudomonas putida W619]
Length = 259
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
++I++ LG S R + LP +T+A + + ++A K G+ IL +PM
Sbjct: 30 MSIIIDDLGQSTERDSRTLA-LPGPVTMAIMPDTPHASEFARQAHKAGKTVILHMPMDPA 88
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y L +L RL +L + G+ N+ G+ + + + + + E
Sbjct: 89 TGPYAWHPDIAL------PELARRLDAALAKVPYAAGINNHMGSRMTAQRGAMTWLMGEL 142
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R L F D +S + A L ++ D++LDD + I +L+ +AR G
Sbjct: 143 QRRHLFFVDSRTSAATVAAAEAQAQALGHVSRDVFLDDVRTTEAITTQLQQGVALARRQG 202
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
A+ + + ++++V+ Q + + + + +V L+ +
Sbjct: 203 SAVLIGHPYPQTLQVLEQEMPRLRSQGIELVTLTQMI 239
>gi|218530515|ref|YP_002421331.1| hypothetical protein Mchl_2561 [Methylobacterium chloromethanicum
CM4]
gi|218522818|gb|ACK83403.1| protein of unknown function DUF610 YibQ [Methylobacterium
chloromethanicum CM4]
Length = 401
Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats.
Identities = 97/393 (24%), Positives = 171/393 (43%), Gaps = 8/393 (2%)
Query: 5 LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
L PL ++ S + + L+ I ++ G IR
Sbjct: 9 LTKPLGVADKAAHPRFALRPSAGAAAGVGALVVALLAGGIALTGDPRGGEPRAQALIEIR 68
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT-VVNKPTRST 123
E AP + I + P+ + ++++ S + + V+ + +
Sbjct: 69 E-APASV---PRIAEAAPPAAKGPAQSASEVEQASGVSVFRPDGSTAPDAPVIIRVPNAA 124
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
+ P + RL L + +V A +G RIA++VSGLGI
Sbjct: 125 QVKLAPAPDARLTERGRHGPLPRIGEGRLRPLDVYA---RPDEPGTGPRIAVLVSGLGIG 181
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
+ T AI LPA ++LA + G L++ A++ G E +LQ+PM+ FD ++ T
Sbjct: 182 EMATLGAIARLPAAVSLALSPYGTDLEKTAARAREAGHEILLQLPMEPFDYPDSDPGPQT 241
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
L + + L+R +++ R G+ G +N+ GA L+S + E + K+ + RGL F DDG
Sbjct: 242 LLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPVLKDLSARGLGFVDDG 301
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDE 363
++P +A K LP + A++ +D D I +L LE +AR G + + A
Sbjct: 302 AAPGTQVATVAAKTKLPSVRAEIVIDAVARPDAIDAELARLETLARQKGLVLASSSASPL 361
Query: 364 SIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+IE +S+W + R + +VP+S + + S
Sbjct: 362 TIERLSRWSRDLEARGIRLVPVSAILRRPGGVS 394
>gi|258514447|ref|YP_003190669.1| hypothetical protein Dtox_1161 [Desulfotomaculum acetoxidans DSM
771]
gi|257778152|gb|ACV62046.1| protein of unknown function DUF610 YibQ [Desulfotomaculum
acetoxidans DSM 771]
Length = 293
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 3/233 (1%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
D++ A++AIV+ G S + + +T A N + + AK+KG
Sbjct: 61 DQSASKKVKKAQVAIVIDDFGQSNREGVMEMLSINRPLTFAVMPNLENSVKDAAMAKEKG 120
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
E I+ +PMQ + V+Q+ R+ + G N+ G+++ S
Sbjct: 121 FEIIVHLPMQPISGKSRWMGPGGITFDMGVEQIRQRVLQDFDQVPFAVGFNNHMGSLITS 180
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
++ I + ++G D ++ + ++ L +P D++LD+ + + ++++
Sbjct: 181 KEKLMSPILEVAKEKGFFVLDSRTTEDSKVVSISKSLGIPCAKRDVFLDEVKNYEHMKKQ 240
Query: 341 LKGLEEIARTTGQAIGVAVAF---DESIEVISQWLQQEHVRDVSVVPLSCLAK 390
LK L IA T G AIG+ + IS+ + + + V LS L
Sbjct: 241 LKVLSTIALTKGTAIGIGHVGQGDKKMALAISEMIPVMEEQGIEFVYLSKLVH 293
>gi|163851709|ref|YP_001639752.1| protein of unknown function DUF610 YibQ [Methylobacterium
extorquens PA1]
gi|163663314|gb|ABY30681.1| protein of unknown function DUF610 YibQ [Methylobacterium
extorquens PA1]
Length = 418
Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats.
Identities = 98/393 (24%), Positives = 170/393 (43%), Gaps = 8/393 (2%)
Query: 5 LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
L PL + + S + + L+ I ++ G IR
Sbjct: 26 LTKPLGVADKATRPRLALRPSAGAAAGVGALVVALLAGGIALTGDPRGGEPRAQALIEIR 85
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT-VVNKPTRST 123
E AP + I D P+ + ++++ S + + V+ + +
Sbjct: 86 E-APASV---PRIADAAPPAAKGPAQSASEVEQASGVSVFRPDGSTAPDAPVIIRVPNAA 141
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
+ P + RL L + +V A +G RIA++VSGLGI
Sbjct: 142 QVKLAPAPDARLTERGRHGPLPRIGEGRLRPLDVYA---RPDEPGTGPRIAVLVSGLGIG 198
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
+ T AI LPA ++LA + G L++ A++ G E +LQ+PM+ FD ++ T
Sbjct: 199 EMATLGAIARLPAAVSLALSPYGTDLEKTATRAREAGHEILLQLPMEPFDYPDSDPGPQT 258
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
L + + L+R +++ R G+ G +N+ GA L+S + E + K+ + RGL F DDG
Sbjct: 259 LLASARPGENLDRAAWAMSRFPGFVGAVNFMGAKLMSEAGALEPVLKDLSARGLGFVDDG 318
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDE 363
++P +A K LP A++ +D D I +L LE +AR G + + A
Sbjct: 319 AAPGTQVATVAAKTKLPSARAEIVIDAVARPDAIDAELARLETLARQKGLVLASSSASPL 378
Query: 364 SIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+IE +S+W + R + +VP+S + + S
Sbjct: 379 TIERLSRWSRDLEARGIRLVPVSAILRRPGGVS 411
>gi|239995835|ref|ZP_04716359.1| hypothetical protein AmacA2_15321 [Alteromonas macleodii ATCC
27126]
Length = 302
Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 89/214 (41%), Gaps = 4/214 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
I I++ LG + A LP IT + A+++G+ +L +PMQA
Sbjct: 28 IIIILDDLGYRPSDV--AAFSLPKEITFSILPQTPLASEIALRAEQEGRAVMLHMPMQAQ 85
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ L + LR +++ GV N+ G+ ++ E + KE
Sbjct: 86 SGK--DMGPLGLTTDMFAGAITYNLRKAMKSVPNAVGVNNHMGSAFTGQQKGMEALLKEV 143
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
++GL F D ++ +A +L +P ++LD +++ + ++ ++ IA+ G
Sbjct: 144 KRQGLFFVDSRTTVLTKGEEIAQRLGVPSASRQVFLDHKLEPAFLLKQFNHMKRIAKKNG 203
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
+ + E+++ + + +++ ++
Sbjct: 204 HVVVIGHPHPETVDFLKTHIPSLEKEGLTLTSVT 237
>gi|229587895|ref|YP_002870014.1| hypothetical protein PFLU0334 [Pseudomonas fluorescens SBW25]
gi|229359761|emb|CAY46611.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 262
Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 96/230 (41%), Gaps = 7/230 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
A + +++ LG + +R + LP +T A + + +EA K G+
Sbjct: 20 TPAGEPQKAYLTLIIDDLGQNLPRDRRVLA-LPGPVTTAIMPDTPHAAEFAREAHKAGKI 78
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM + +++L RL + + G+ N+ G+ + +
Sbjct: 79 VILHMPMDPAT------GPFAWHPELPIEELGKRLDAAFQAVPYTAGINNHMGSRMTAQP 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R F D +S + + A K+ L ++ D++LDD+ I +L+
Sbjct: 133 AAMAWLMAELQRRNKFFVDSRTSAQTVAAAEAQKIGLAHVSRDVFLDDERTEAAITTQLQ 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
++A G A+ + + +++ V+ + L + + V + + + +
Sbjct: 193 TAIKLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGVDWIDIKLMISVR 242
>gi|313501034|gb|ADR62400.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 255
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 7/231 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A+ A ++I++ LG S R + LP +T+A + + ++A K G+
Sbjct: 16 AQAAPANKAYMSIIIDDLGQSAERDNRTLA-LPGPVTMAIMPDTPHATDFARQAHKAGKT 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y L +L RL +L + G+ N+ G+ + + +
Sbjct: 75 VILHMPMDPATGPYAWHPEVPLT------ELARRLDTALAKVPYAAGINNHMGSRMTAQR 128
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + E +R L F D +S + A L ++ D++LDD + I +L
Sbjct: 129 QPMAWLMGELQQRHLFFVDSRTSAATVAAAEAQAQGLAHVSRDVFLDDVRTTEAITRQLH 188
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+A G + + + +++EV+ + L + ++++ L+ + S
Sbjct: 189 QGIALASKQGSVVLIGHPYPQTLEVLERELPGLKRQGITLIGLNQMIAERS 239
>gi|94987564|ref|YP_595497.1| hypothetical protein LI1122 [Lawsonia intracellularis PHE/MN1-00]
gi|94731813|emb|CAJ55176.1| uncharacterized protein conserved in bacteria [Lawsonia
intracellularis PHE/MN1-00]
Length = 445
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 88/222 (39%), Gaps = 3/222 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
C RI IV+ +G S + I L ITL+ + + G E +
Sbjct: 208 CPIDEKPRITIVIDDIGESIEAANQLI-KLDFPITLSILPHTHYAKSIAMLTHSTGNEVL 266
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ PM++ Y + + +++ N L ++ + G+ N+ G+ N++
Sbjct: 267 IHQPMESIQSPYVSAGPGEIHTKMSAEEISNILCKNIEKIPYASGLNNHMGSCFTCNEKG 326
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLKG 343
+ K A +GL D + P + +A LP ++D I +LK
Sbjct: 327 NHTVCKILASKGLFVLDSKTHPSSSFYNIAKGKGLPAYYRTHFIDHGHHTESSILNQLKK 386
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
E+ A GQAI + + E+I + +W+ + +VPL
Sbjct: 387 AEKYAIEKGQAIVIGHPYPETISALKKWI-SLRDTSIHIVPL 427
>gi|77456558|ref|YP_346063.1| hypothetical protein Pfl01_0330 [Pseudomonas fluorescens Pf0-1]
gi|77380561|gb|ABA72074.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
Length = 258
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 98/235 (41%), Gaps = 7/235 (2%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A + A + +++ LG + +R + LP +T A + + +EA +
Sbjct: 17 AHAEPARPTPQKAYLTLIIDDLGQNLPRDRRVLA-LPGPVTTAIMPDTPHATEFAREAHR 75
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G+ IL +PM + +++L RL + + G+ N+ G+ +
Sbjct: 76 AGKVVILHMPMDPAT------GPFAWHPELPIEELEKRLNAAFKMVPYTAGINNHMGSRM 129
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
+ + + E +R F D +S + + A K++L + D++LDD+ I
Sbjct: 130 TAQPVAMAWLMGELQRRHKFFVDSRTSAQTVAAQQAQKIDLASVSRDVFLDDERTEAAIL 189
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+L+ +A G A+ + + +++ V+ + L + + + + + + + S
Sbjct: 190 TQLQTAISLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGIEWIDIKQMISVRS 244
>gi|260914710|ref|ZP_05921175.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631214|gb|EEX49400.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 280
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 103/223 (46%), Gaps = 4/223 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G Q I +P I++A + + ++AK++G++ ++ +
Sbjct: 25 AQSAKLAIVIDDIGYHQK-EDAQIYAMPTEISVAIIPSAPHARQRNEQAKQQGRDVLIHM 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + E LK+ + ++ +R++ + R + G+ N+ G+ S+
Sbjct: 84 PMQPLGQQKIETGG--LKLGLSQDEVNDRVQTAKRIVSHAIGMNNHMGSAATSDSALMTK 141
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + ++ L F D + R++ +A + + + ++LDD ++ + +
Sbjct: 142 LMRSLKEQHLFFLDSRTIGRSVAGKIAKEYGVKSLDRHIFLDDSDLYADVQRQFQNAVRY 201
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ G AI + ++ V+ L+ +DV +V + L +
Sbjct: 202 AQKNGTAIVIGHPRKNTVAVLQAGLKNLP-KDVQLVGIGSLWR 243
>gi|229016679|ref|ZP_04173614.1| hypothetical protein bcere0030_12500 [Bacillus cereus AH1273]
gi|228744615|gb|EEL94682.1| hypothetical protein bcere0030_12500 [Bacillus cereus AH1273]
Length = 256
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 5/237 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+NA ++AIV+ G + GT R ++ LP +T+A S + A KKG E
Sbjct: 21 PIQANAHTNKVAIVIDDFGNNMKGTDRMLS-LPIPLTIAVMPFLPSTKQDAIAAHKKGHE 79
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 80 VIIHMPMEPIRGKKEWLGPKAITTDLSDEEINNRLEQAIQEIPHAIGMNNHMGSKVTADE 139
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K GL + D ++P ++ + +L +P + L+ DD I + +
Sbjct: 140 RIVRLILSACKKHGLFYLDSKTNPNSVVPKIGKELGVPVIENQLFFDDVYTASHISRQAQ 199
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
L + + + + + + VI + + + LS L P S
Sbjct: 200 LLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKVREHA-DFIFLSDLVLSPPPVS 255
>gi|167036099|ref|YP_001671330.1| hypothetical protein PputGB1_5110 [Pseudomonas putida GB-1]
gi|166862587|gb|ABZ00995.1| protein of unknown function DUF610 YibQ [Pseudomonas putida GB-1]
Length = 259
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
++I++ LG S R + LP +T+A + + ++A + G+ IL +PM
Sbjct: 30 LSIIIDDLGQSSERDNRTLA-LPGPVTMAIMPDTPHASDFARQAHRAGKTVILHMPMDPA 88
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
Y L +L +RL+ +L + G+ N+ G+ + + +E + E
Sbjct: 89 TGPYAWHPGAPL------PELASRLQAALAKVPYAAGINNHMGSRMTAQREPMVWLMGEL 142
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+R L F D +S + A ++ L ++ D++LDD + I +L+ +AR G
Sbjct: 143 QQRHLFFVDSRTSAATVAAAEAQRIGLAHVSRDVFLDDVRTPEAIAAQLQQGVALARKQG 202
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
A+ + + ++++V+ + + + ++PL + S
Sbjct: 203 SAVLIGHPYPQTLQVLESAMPGLKHQGIELIPLRQMIAERS 243
>gi|117625892|ref|YP_859215.1| polysaccharide deacetylase [Escherichia coli APEC O1]
gi|115515016|gb|ABJ03091.1| predicted polysaccharide deacetylase [Escherichia coli APEC O1]
Length = 277
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRMQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|229102031|ref|ZP_04232744.1| hypothetical protein bcere0019_11960 [Bacillus cereus Rock3-28]
gi|228681418|gb|EEL35582.1| hypothetical protein bcere0019_11960 [Bacillus cereus Rock3-28]
Length = 256
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ L + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKALTTDLSDEEINNRLEQAIKEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILTACKKHGLFYLDSKTNPNSVVPQIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA LS
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLA-LSP 251
Query: 394 PS 395
P+
Sbjct: 252 PA 253
>gi|311030007|ref|ZP_07708097.1| divergent polysaccharide deacetylase [Bacillus sp. m3-13]
Length = 257
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
K+ S ++AIV+ G + GT+ I LP +T+A ++ ++ + A +
Sbjct: 18 PSVKSSAEVHSSNKVAIVIDDFGNNMKGTEE-ILHLPVPLTVAVMPFLSTTEQDAEMAHR 76
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G E IL +PM+ + + T +++ R+ ++ G+ N+ G+ +
Sbjct: 77 LGHEVILHLPMEPLKGKSSWLGPGAITSNLTDKEIYKRVNDAIDSVPYAVGINNHMGSKI 136
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++K +I +R L + D ++ +++ LA +L +P++ +L+ D+ + I
Sbjct: 137 TADKRIMRIILGICKERNLYYLDSKTTKKSVVAELATELGVPFLENELFFDEVYSTNHIV 196
Query: 339 EKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++ L + I + +++ V+ Q++ + + +V LS +
Sbjct: 197 KQTNHLIKKTEVDDSIIAIGHVGVVGEKTAGVLKQYIPKLQEKA-EIVTLSNIL 249
>gi|229084421|ref|ZP_04216701.1| hypothetical protein bcere0022_10610 [Bacillus cereus Rock3-44]
gi|228698961|gb|EEL51666.1| hypothetical protein bcere0022_10610 [Bacillus cereus Rock3-44]
Length = 253
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A ++AIV+ G + GT+R ++ LP +T+A S + A +KG E
Sbjct: 18 PLQTYAHTNKVAIVIDDFGNNMKGTERMLS-LPIPLTVAVMPFLPSTKQDAVAAHQKGHE 76
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM+ + + Q++ R+ +++ G+ N+ G+ + +++
Sbjct: 77 VILHMPMEPIKGKKEWLGPKAITTDLSDQEIEKRIEQAIQDVPHAIGMNNHMGSKVTADE 136
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K L + D ++P ++ + +L +P + L+ DD I ++ +
Sbjct: 137 RIMRIILSVCKKHNLFYLDSKTNPNSVVPKIGKELGVPIVENQLFFDDVYTSSHITKQAQ 196
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
L + + + + + + +VI + + + LS LA P S
Sbjct: 197 VLLQRIQEKPVVVAIGHVGPPGEITSQVIQSSIPKVREHA-DFIFLSDLALSPPPVS 252
>gi|15603373|ref|NP_246447.1| hypothetical protein PM1508 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721894|gb|AAK03592.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 280
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 100/229 (43%), Gaps = 4/229 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G Q I LP I++A + + ++A ++G++ ++ +
Sbjct: 25 AQPAKLAIVIDDIGYHQK-EDAQIYALPKEISVAIIPSAPHARQRNEQAYQQGRDILIHM 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ E L V + + R++ + + G+ N+ G+ ++ E
Sbjct: 84 PMQPLSHQRIEAGG--LHVGMRQEDVQQRVQTAKAIVSHAIGMNNHMGSAATADAELMHK 141
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +E + L F D + R++ +A + + + ++LDD+ + + +
Sbjct: 142 LMQELKVQDLFFLDSRTIGRSVAGKIAKEYGVQSLDRHIFLDDKDTYADVERQFQRAVHY 201
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
A+ G AI + ++ V+ L+ +V +V + L + + ++
Sbjct: 202 AQKHGTAIAIGHPRKNTVAVLQAGLKHLP-DNVQLVGMGRLWRSETETA 249
>gi|85060169|ref|YP_455871.1| hypothetical protein SG2191 [Sodalis glossinidius str. 'morsitans']
gi|84780689|dbj|BAE75466.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 317
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 93/227 (40%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
C A ++AIV+ G + T+ + +P N+++A + +A ++ +E
Sbjct: 17 ACPVAQAGKLAIVIDDFGY-RPATENQVLAMPVNVSIAVLPDAPYAREMALKAHRQRREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E TL + Q+ + ++ + ++ G+ N+ G+ + S+
Sbjct: 76 LIHLPMAPLSKQPLER--NTLTPAMSRDQVSDIIQQATQKVPYAVGLNNHMGSAMTSSLS 133
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + + F D + + + + + ++LDD + IR +
Sbjct: 134 GMQHVMQALSHYSYYFLDSVTIGNSQAVPASAGTGVRVLKRQVFLDDTANEADIRHQFNR 193
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+AR G AI + ++ V+ Q L D+ +V S L
Sbjct: 194 AVALARRNGFAIAIGHPHPATVRVLQQMLPSLPG-DIVLVRPSMLLN 239
>gi|229095918|ref|ZP_04226896.1| hypothetical protein bcere0020_11690 [Bacillus cereus Rock3-29]
gi|229114870|ref|ZP_04244283.1| hypothetical protein bcere0017_11670 [Bacillus cereus Rock1-3]
gi|228668562|gb|EEL23991.1| hypothetical protein bcere0017_11670 [Bacillus cereus Rock1-3]
gi|228687542|gb|EEL41442.1| hypothetical protein bcere0020_11690 [Bacillus cereus Rock3-29]
Length = 256
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+NA ++AIV+ G + GT + ++ LP +T+A S A KKG E
Sbjct: 21 PIQANAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAAHKKGHE 79
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ L + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 80 VIIHMPMEPIKGKKEWLGPKALTTDLSDEEINNRLEQAIKEVPHAIGMNNHMGSKVTADE 139
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K GL + D ++P ++ + +L +P + L+ DD I ++ +
Sbjct: 140 RIVRLILTACKKHGLFYLDSKTNPNSVVPQIGKELGVPIIENQLFFDDVYTAGHISKQAQ 199
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
L + + + + + + VI + + + LS LA LS P+
Sbjct: 200 LLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLA-LSPPA 253
>gi|254360760|ref|ZP_04976908.1| hypothetical protein MHA_0322 [Mannheimia haemolytica PHL213]
gi|153091330|gb|EDN73304.1| hypothetical protein MHA_0322 [Mannheimia haemolytica PHL213]
Length = 281
Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A++AIV+ +G + R I LP +++A K+A + ++
Sbjct: 21 FTPLVQAAQMAIVIDDVGY-RIKEDREILALPKAVSVAIIPVAPYATERAKDAYNQKRDI 79
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM+ + E+ + + +++ + S + G+ N+ G+ S+
Sbjct: 80 LIHLPMEPKSKQPIEEGG--IHIGDNEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSA 137
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + K + L F D + ++ A + + + D++LDD ++++
Sbjct: 138 TMQHLLKVLKENTLFFLDSKTIGSSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFAH 197
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G A+ + +I V+ Q L Q +D+ +V + L +
Sbjct: 198 AINHARKNGVAVVIGHPRKNTISVLKQNLAQLP-QDIELVSVGNLWR 243
>gi|74314149|ref|YP_312568.1| hypothetical protein SSON_3791 [Shigella sonnei Ss046]
gi|73857626|gb|AAZ90333.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 277
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|283787753|ref|YP_003367618.1| polysaccharide deacetylase [Citrobacter rodentium ICC168]
gi|282951207|emb|CBG90900.1| putative polysaccharide deacetylase [Citrobacter rodentium ICC168]
Length = 270
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 3/197 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A N +A G E ++ +PM + E D TL+ + ++
Sbjct: 1 MPDAISVAVLPNAPHAREMAAKAHSSGHEVLIHLPMAPLSKQPLEKD--TLRPEMSSDEI 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ + G+ N+ G+ + S+ + + + + L F D + +
Sbjct: 59 ERIIREAVSKVPYAVGLNNHMGSAMTSSLFGMQKVMQALERYELYFLDSMTIGNSQAMRA 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A + + ++LDD + IR + E+AR+ G AI + ++ V+ Q +
Sbjct: 119 ASGTGVKVIKRKVFLDDTQNEADIRRQFNRAIELARSNGSAIAIGHPHPSTVRVLQQMVY 178
Query: 374 QEHVRDVSVVPLSCLAK 390
D+++V S L
Sbjct: 179 NLPA-DITLVRPSSLLN 194
>gi|75759334|ref|ZP_00739431.1| Hypothetical exported protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218896364|ref|YP_002444775.1| hypothetical protein BCG9842_B3959 [Bacillus cereus G9842]
gi|228900013|ref|ZP_04064249.1| hypothetical protein bthur0014_12220 [Bacillus thuringiensis IBL
4222]
gi|74493166|gb|EAO56285.1| Hypothetical exported protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218540741|gb|ACK93135.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228859627|gb|EEN04051.1| hypothetical protein bthur0014_12220 [Bacillus thuringiensis IBL
4222]
Length = 256
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|229043173|ref|ZP_04190897.1| hypothetical protein bcere0027_12270 [Bacillus cereus AH676]
gi|228726180|gb|EEL77413.1| hypothetical protein bcere0027_12270 [Bacillus cereus AH676]
Length = 256
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAIMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|253573367|ref|ZP_04850710.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846895|gb|EES74900.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 307
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 47/260 (18%), Positives = 105/260 (40%), Gaps = 9/260 (3%)
Query: 144 LLAKNKVGREDTEVPAMDKNFCSNASGA--RIAIVVSGLGISQTGTQRAINLLPANITLA 201
L + + D A ++A+++ LG GT+ +N LP +T+A
Sbjct: 39 LAENPGTESSELKSETQDHKAALKPRSASHKVAVIIDDLGNGMAGTEEILN-LPIKLTVA 97
Query: 202 FASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSL 261
+ + A + G + I+ +PM+ + + T +++ R+ ++
Sbjct: 98 VMPFLETTQEDARRAHEYGHDVIIHMPMEPKQGKAEWLGPGAILSSMTDEEIRQRVEAAI 157
Query: 262 RRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY 321
+ G+ N+ G+ + ++ VI + +RGL F D ++ R++ L+ K+ LP
Sbjct: 158 DQVPYAIGMNNHMGSKVTEDERVMSVILEVCRERGLFFIDSKTNSRSVVPRLSEKMGLPR 217
Query: 322 MVADLYLDDQVDRDKIREKLKGLEEIAR--TTGQAIGVAVA---FDESIEVISQWLQQEH 376
+ D++LDD + ++L+ + I + + ++ + + +
Sbjct: 218 LENDIFLDDVGSEAHVTKQLRQVLNILNKGKRNSCVTIGHVGVQGKKTAAALQKNIPILQ 277
Query: 377 VRDVSVVPLSCLA-KLSSPS 395
V + S L + SPS
Sbjct: 278 AVGVQFIGTSELVWEQISPS 297
>gi|209754798|gb|ACI75711.1| hypothetical protein ECs4492 [Escherichia coli]
Length = 277
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|239906405|ref|YP_002953146.1| hypothetical protein DMR_17690 [Desulfovibrio magneticus RS-1]
gi|239796271|dbj|BAH75260.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 390
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 60/340 (17%), Positives = 111/340 (32%), Gaps = 4/340 (1%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
VG + + + P + +P + L SQ Q +
Sbjct: 49 VGQQAARKKPEPPKPASKPSPAAPEAATPQGAPPAPTDEHDALTLARALSQAQAQAKGTP 108
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKK--ELLAKNKVGREDTEVPAMDKNFCSNA 168
+ + + + PA
Sbjct: 109 PPVHFEEHLPPQAASPENGNGNGNGNGNGPHEVRGKVEPPAGAQPPPPEPAAPPVARDEG 168
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
R+ +V+ +G + + LP ++TLA N A + E IL P
Sbjct: 169 KNPRMVVVIDDIG-DHPVMAKNLTELPFSVTLAILPNRPRTRSVEAMAASQHVEIILHQP 227
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQ L +++ L +L + G+ N+ G+ S+ + +
Sbjct: 228 MQPGTYPRVNPGPGALFTDMEPERVKEILADNLSQVPHVKGINNHMGSAFTSDPAGMDAV 287
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
++GL F D +S + A K +P+ ++LD+ + I +LK E A
Sbjct: 288 MAVLKQKGLFFLDSVTSAVSAAPEAARKHGVPFYRRAVFLDNVRNVRTILGQLKTAERNA 347
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G+AI + + E++E + W ++ R V VV L+ L
Sbjct: 348 LKNGRAIAIGHPYGETLEALKIWAKERDGR-VDVVTLTEL 386
>gi|219870484|ref|YP_002474859.1| hypothetical protein HAPS_0219 [Haemophilus parasuis SH0165]
gi|219690688|gb|ACL31911.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
Length = 281
Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++ IV+ +G + AI LP + +A + +AK++G+E
Sbjct: 21 FAPLAYANKLVIVIDDIGY-RIKEDNAIYTLPKEVNVAIIPSAPYATARANKAKEQGREI 79
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ + E L V ++ + + ++ + N+ G+ ++K
Sbjct: 80 LIHLPMQPKVKQPIEAG--ALLVGMGESEVSELIHQAQQQVPYAIALNNHMGSKATADKT 137
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + K +++GL F D ++ ++ A L + ++LD+ ++ + +
Sbjct: 138 TMQHLMKALSQQGLGFLDSKTAGDSVAYQTAKAYGLNALERHIFLDNSDVFADVQRQFQH 197
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ AR G AI + SI V+ Q + D+ +V LS L K
Sbjct: 198 AVQYARKHGIAIMIGHPRKHSIAVLEQGIANLPA-DIQLVSLSSLWK 243
>gi|82779107|ref|YP_405456.1| hypothetical protein SDY_4047 [Shigella dysenteriae Sd197]
gi|81243255|gb|ABB63965.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 277
Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|30019484|ref|NP_831115.1| hypothetical protein BC1334 [Bacillus cereus ATCC 14579]
gi|206967544|ref|ZP_03228500.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228907064|ref|ZP_04070928.1| hypothetical protein bthur0013_12370 [Bacillus thuringiensis IBL
200]
gi|228951813|ref|ZP_04113911.1| hypothetical protein bthur0006_12270 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228957703|ref|ZP_04119448.1| hypothetical protein bthur0005_12190 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229068983|ref|ZP_04202276.1| hypothetical protein bcere0025_11910 [Bacillus cereus F65185]
gi|229078617|ref|ZP_04211174.1| hypothetical protein bcere0023_12820 [Bacillus cereus Rock4-2]
gi|229126748|ref|ZP_04255760.1| hypothetical protein bcere0015_12050 [Bacillus cereus BDRD-Cer4]
gi|229144036|ref|ZP_04272452.1| hypothetical protein bcere0012_11990 [Bacillus cereus BDRD-ST24]
gi|229177839|ref|ZP_04305212.1| hypothetical protein bcere0005_12030 [Bacillus cereus 172560W]
gi|229189514|ref|ZP_04316530.1| hypothetical protein bcere0002_11930 [Bacillus cereus ATCC 10876]
gi|296502013|ref|YP_003663713.1| hypothetical protein BMB171_C1177 [Bacillus thuringiensis BMB171]
gi|29895028|gb|AAP08316.1| hypothetical Exported Protein [Bacillus cereus ATCC 14579]
gi|206736464|gb|EDZ53611.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228593959|gb|EEK51762.1| hypothetical protein bcere0002_11930 [Bacillus cereus ATCC 10876]
gi|228605630|gb|EEK63078.1| hypothetical protein bcere0005_12030 [Bacillus cereus 172560W]
gi|228639433|gb|EEK95847.1| hypothetical protein bcere0012_11990 [Bacillus cereus BDRD-ST24]
gi|228656688|gb|EEL12514.1| hypothetical protein bcere0015_12050 [Bacillus cereus BDRD-Cer4]
gi|228704687|gb|EEL57116.1| hypothetical protein bcere0023_12820 [Bacillus cereus Rock4-2]
gi|228714095|gb|EEL65977.1| hypothetical protein bcere0025_11910 [Bacillus cereus F65185]
gi|228801975|gb|EEM48847.1| hypothetical protein bthur0005_12190 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228807736|gb|EEM54257.1| hypothetical protein bthur0006_12270 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228852568|gb|EEM97358.1| hypothetical protein bthur0013_12370 [Bacillus thuringiensis IBL
200]
gi|296323065|gb|ADH05993.1| hypothetical protein BMB171_C1177 [Bacillus thuringiensis BMB171]
Length = 256
Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|152974861|ref|YP_001374378.1| protein of unknown function DUF610 YibQ [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023613|gb|ABS21383.1| protein of unknown function DUF610 YibQ [Bacillus cytotoxicus NVH
391-98]
Length = 256
Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P + +A ++AIV+ G + GT+ ++ LP +T+A S + A
Sbjct: 14 IPFLIFPINIHAHTNKVAIVIDDFGNNMKGTKEMLS-LPIPLTVAVMPFLPSTKQDAIAA 72
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + + ++ +R+ ++ G+ N+ G+
Sbjct: 73 HKKGHEVIIHMPMEPINGKKEWLGPKAITTDLSDDEIKHRIEQAIEAVPYAIGMNNHMGS 132
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++ ++ + +L++P + ++ DD
Sbjct: 133 KVTADERIMRIILTVCKKHGLFYLDSKTNSNSVVSRIGKELDVPIIENQMFFDDIYTSSH 192
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + R T + + + + I + + + LS L LS
Sbjct: 193 ILKQAQFLLQKTRKTPVVVAIGHVGPPGETTSRAIQSTIPKVREHA-DFIFLSDLV-LSP 250
Query: 394 PSS 396
P S
Sbjct: 251 PVS 253
>gi|113461585|ref|YP_719654.1| hypothetical protein HS_1442 [Haemophilus somnus 129PT]
gi|112823628|gb|ABI25717.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 270
Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G I LP +++A + + ++AK++ ++ ++ +PMQ
Sbjct: 17 KLAIVIDDIGYRLK-EDNQIYSLPKEVSVAIIPSAPHAKQRDQQAKQQDRDILIHLPMQP 75
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ ED +K+ + ++ +R+R + G+ N+ G+ ++K+ +
Sbjct: 76 LNLQKIEDGG--IKLGMSQPEVYHRVRNAKSILPNAIGMNNHMGSAATADKDLMNKLMTA 133
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + R++ +A + +P + ++LDD ++ + + AR
Sbjct: 134 LLQQDLFFLDSRTIGRSVAGKIAREFGIPTLERHIFLDDSDKLSDVQRQWNAAIQYARKR 193
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ ++Q +D+ +V + L +
Sbjct: 194 GTAIVIGHPRKNTIAVLQMGIKQLP-KDIQLVGIGSLWR 231
>gi|229108888|ref|ZP_04238492.1| hypothetical protein bcere0018_11640 [Bacillus cereus Rock1-15]
gi|228674544|gb|EEL29784.1| hypothetical protein bcere0018_11640 [Bacillus cereus Rock1-15]
Length = 256
Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KITADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|251797981|ref|YP_003012712.1| hypothetical protein Pjdr2_3996 [Paenibacillus sp. JDR-2]
gi|247545607|gb|ACT02626.1| protein of unknown function DUF610 YibQ [Paenibacillus sp. JDR-2]
Length = 275
Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 95/242 (39%), Gaps = 5/242 (2%)
Query: 152 REDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDR 211
M S + AIV+ G GT+ + LPA T+A + +
Sbjct: 22 MPAGAGRVMAAEEEQAKSARQFAIVIDDFGNGMNGTEEMLQ-LPAKFTVAIMPFMPTTKK 80
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
+EA + G + I+ +PM+ N + + +++ R+ ++ G+
Sbjct: 81 DAEEAHRLGHDVIVHMPMEPNKGQKNWLGPGAITADLSDEEIKKRVEDAIDDVPYAVGMN 140
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ + +++ ++ +RGL F D ++ + + + +L +P + +++LDD
Sbjct: 141 NHMGSKITADERIMRIVLSVCKERGLFFLDSRTTFKTVVPKVTEELGVPALANNVFLDDV 200
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRD-VSVVPLSC 387
+ +++ ++ + I + ++ V+ + V V LS
Sbjct: 201 YTEQHVSKQMTIAKKHLESHDTCIVIGHVGPPGKKTAAVLKASIPAMQSDGQVQFVKLSE 260
Query: 388 LA 389
L
Sbjct: 261 LV 262
>gi|323179414|gb|EFZ64981.1| divergent polysaccharide deacetylase family protein [Escherichia
coli 1180]
Length = 277
Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|228920144|ref|ZP_04083493.1| hypothetical protein bthur0011_11610 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839600|gb|EEM84892.1| hypothetical protein bthur0011_11610 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 256
Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTARH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|82545982|ref|YP_409929.1| hypothetical protein SBO_3620 [Shigella boydii Sb227]
gi|81247393|gb|ABB68101.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 277
Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|332139955|ref|YP_004425693.1| hypothetical protein MADE_1002730 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549977|gb|AEA96695.1| hypothetical protein MADE_1002730 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 313
Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
I I++ LG + A LP +T + + A+K+G+ +L +PMQA
Sbjct: 28 IIIILDDLGYRPSDI--AAFSLPKEVTFSILPQTPLASEIAQRAEKEGRAVMLHMPMQAQ 85
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ L + + +R +++ G+ N+ G+ +E+ E + KE
Sbjct: 86 NGK--NMGPLGLSTDMYAGAITHNVRRAMKSVPNAVGINNHMGSAFTGQREAMEALLKEV 143
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
++GL F D ++ + + +A +L +P ++LD +++ + ++ ++ IA+ G
Sbjct: 144 KRQGLFFVDSRTTVLSKGKEIAEQLGVPNASRQVFLDHRLEPAFLLQQFNEMKRIAKREG 203
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
+ + + +I+ + L S+ +
Sbjct: 204 RVLVIGHPHPATIDFLQTHLPLLEKEGFSLASV 236
>gi|229149633|ref|ZP_04277864.1| hypothetical protein bcere0011_11920 [Bacillus cereus m1550]
gi|228633843|gb|EEK90441.1| hypothetical protein bcere0011_11920 [Bacillus cereus m1550]
Length = 256
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|15804158|ref|NP_290197.1| hypothetical protein Z5041 [Escherichia coli O157:H7 EDL933]
gi|30065110|ref|NP_839281.1| hypothetical protein S4115 [Shigella flexneri 2a str. 2457T]
gi|56480388|ref|NP_709393.2| hypothetical protein SF3653 [Shigella flexneri 2a str. 301]
gi|12518367|gb|AAG58761.1|AE005589_1 hypothetical protein Z5041 [Escherichia coli O157:H7 str. EDL933]
gi|13363967|dbj|BAB37915.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|30043371|gb|AAP19092.1| hypothetical protein S4115 [Shigella flexneri 2a str. 2457T]
gi|56383939|gb|AAN45100.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|209754800|gb|ACI75712.1| hypothetical protein ECs4492 [Escherichia coli]
gi|209754802|gb|ACI75713.1| hypothetical protein ECs4492 [Escherichia coli]
gi|209754804|gb|ACI75714.1| hypothetical protein ECs4492 [Escherichia coli]
gi|209754806|gb|ACI75715.1| hypothetical protein ECs4492 [Escherichia coli]
gi|313647513|gb|EFS11963.1| divergent polysaccharide deacetylase family protein [Shigella
flexneri 2a str. 2457T]
Length = 277
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|302381253|ref|YP_003817076.1| hypothetical protein Bresu_0138 [Brevundimonas subvibrioides ATCC
15264]
gi|302191881|gb|ADK99452.1| protein of unknown function DUF610 YibQ [Brevundimonas
subvibrioides ATCC 15264]
Length = 399
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 80/372 (21%), Positives = 141/372 (37%), Gaps = 14/372 (3%)
Query: 25 SRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIED--KQS 82
+ + + +++++ + ++ AP+ P +E
Sbjct: 36 PPVAVGAAGLLLLGTVALFLTVLGDPRA--GTPSARVALKREAPVAPPAPSGLEAFSMGG 93
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
+ + + G +V + + I GLS+
Sbjct: 94 FGAWQGLSGAPVDPATGAAGGDALITLPDGASVAGGSAIAAPPQPAQPLVAAPIAGLSQP 153
Query: 143 ELLAKNKVGREDTEVPA--MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITL 200
V D VPA + F N +A++V GLG++ T+ AI LPA++TL
Sbjct: 154 GPQGFLPVIASDGRVPAQAYARPFRPNGK-PTVALIVGGLGLNAVTTRAAIERLPADVTL 212
Query: 201 AFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYS 260
+F L W+ A+ +G E +++IPM+ + YTL T + ++ +
Sbjct: 213 SFVPYAEGLQGWINLARAQGHEVMIEIPMEPTGYPNTDPGPYTLLNNATPDDVQAKMAWL 272
Query: 261 LRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP 320
L R TGYFGV NY G +++ +RG+ F DDG S R A
Sbjct: 273 LGRATGYFGVTNYLGDRFVTSDTGMSAFLGILRQRGIAFLDDG-SARRRPGAWAR----- 326
Query: 321 YMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDV 380
AD +D+ I L LE A++ G A+G A+ ++E ++W R +
Sbjct: 327 -ASADSIIDETQTPAAIIGALNMLEATAKSRGAALGTGFAYPVTVEAAARWTAGLDARGL 385
Query: 381 SVVPLSCLAKLS 392
+ P S + +
Sbjct: 386 QLAPASAMTQRP 397
>gi|912478|gb|AAB18591.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
Length = 277
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P+ I++A + +A G E ++ +PM + E TL+ +
Sbjct: 1 MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
++ +R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 DEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + ++AR G I + ++ V+ Q
Sbjct: 119 MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAK 390
+ D+++V S L
Sbjct: 179 MVYNLPP-DITLVKASSLLN 197
>gi|228938547|ref|ZP_04101155.1| hypothetical protein bthur0008_12120 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971426|ref|ZP_04132052.1| hypothetical protein bthur0003_12060 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978039|ref|ZP_04138418.1| hypothetical protein bthur0002_12430 [Bacillus thuringiensis Bt407]
gi|228781700|gb|EEM29899.1| hypothetical protein bthur0002_12430 [Bacillus thuringiensis Bt407]
gi|228788293|gb|EEM36246.1| hypothetical protein bthur0003_12060 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228821145|gb|EEM67162.1| hypothetical protein bthur0008_12120 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939056|gb|AEA14952.1| hypothetical protein CT43_CH1264 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 256
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|226310991|ref|YP_002770885.1| hypothetical protein BBR47_14040 [Brevibacillus brevis NBRC 100599]
gi|226093939|dbj|BAH42381.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 260
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 107/244 (43%), Gaps = 7/244 (2%)
Query: 155 TEVPAMDKNFCSNASGAR--IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRW 212
+P + + A + +A V+ G + GT+ I +P +T+A S +
Sbjct: 18 GAIPVTANSTPAPAPVVKKLMAFVIDDFGNNMQGTEE-ILAMPVPLTVAVMPFMPSTKQD 76
Query: 213 MKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMN 272
+ A +KG + ++ +PM+ + + + ++ +R+ ++ G+ N
Sbjct: 77 AELAHQKGHDVLVHMPMEPMKGKRSWLGPGAITADLSDDEIRSRVEKAIDDVPHAIGMNN 136
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ + +++ +I K +RGL + D ++ +++ +A ++ +P+ V ++LDD
Sbjct: 137 HMGSKITADERIMRIIMKVVKERGLFYLDSKTTDKSVAAKVAAEMGVPHAVNQIFLDDVY 196
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
I ++++ + + I + ++ ++ Q++ + V +S L
Sbjct: 197 SVPHITKQMELVCKKIHNHPLCIAIGHVGPPGKKTASLLRQYIPRIQKEA-EFVTISKLI 255
Query: 390 KLSS 393
+ ++
Sbjct: 256 QQTT 259
>gi|229154999|ref|ZP_04283113.1| hypothetical protein bcere0010_11930 [Bacillus cereus ATCC 4342]
gi|228628557|gb|EEK85270.1| hypothetical protein bcere0010_11930 [Bacillus cereus ATCC 4342]
Length = 256
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTTDERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|229172071|ref|ZP_04299636.1| hypothetical protein bcere0006_11850 [Bacillus cereus MM3]
gi|228611414|gb|EEK68671.1| hypothetical protein bcere0006_11850 [Bacillus cereus MM3]
Length = 256
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|110807708|ref|YP_691228.1| hypothetical protein SFV_3915 [Shigella flexneri 5 str. 8401]
gi|110617256|gb|ABF05923.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 274
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 78/197 (39%), Gaps = 3/197 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P+ I++A + +A G E ++ +PM + E TL+ + ++
Sbjct: 1 MPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEK--NTLRPEMSSDEI 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + SN + + + + L F D +
Sbjct: 59 ERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRA 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A + + ++LDD + IR + ++AR G I + ++ V+ Q +
Sbjct: 119 AQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVY 178
Query: 374 QEHVRDVSVVPLSCLAK 390
D+++V S L
Sbjct: 179 NLPP-DITLVKASSLLN 194
>gi|229160384|ref|ZP_04288382.1| hypothetical protein bcere0009_11780 [Bacillus cereus R309803]
gi|228623108|gb|EEK79936.1| hypothetical protein bcere0009_11780 [Bacillus cereus R309803]
Length = 244
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 48/237 (20%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+NA ++AIV+ G + GT + ++ LP +T+A S A KKG E
Sbjct: 9 PIQANAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAAHKKGHE 67
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 68 VIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADE 127
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K GL + D ++P ++ + +L +P + L+ DD I ++ +
Sbjct: 128 RIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGHISKQAQ 187
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
L + + + + + + VI + + + LS LA P S
Sbjct: 188 LLIKKIQEKPIMVAIGHVGPPGEITSNVIETSIPKIREHA-DFIFLSDLALSPPPVS 243
>gi|218235875|ref|YP_002366115.1| hypothetical protein BCB4264_A1385 [Bacillus cereus B4264]
gi|218163832|gb|ACK63824.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 256
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 101/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQATAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|49479759|ref|YP_035558.1| divergent polysaccharide deacetylase [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331315|gb|AAT61961.1| conserved hypothetical protein, possible divergent polysaccharide
deacetylase [Bacillus thuringiensis serovar konkukian
str. 97-27]
Length = 259
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPVKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|163939239|ref|YP_001644123.1| protein of unknown function DUF610 YibQ [Bacillus
weihenstephanensis KBAB4]
gi|229010728|ref|ZP_04167925.1| hypothetical protein bmyco0001_11830 [Bacillus mycoides DSM 2048]
gi|229166266|ref|ZP_04294025.1| hypothetical protein bcere0007_12400 [Bacillus cereus AH621]
gi|163861436|gb|ABY42495.1| protein of unknown function DUF610 YibQ [Bacillus
weihenstephanensis KBAB4]
gi|228617211|gb|EEK74277.1| hypothetical protein bcere0007_12400 [Bacillus cereus AH621]
gi|228750402|gb|EEM00231.1| hypothetical protein bmyco0001_11830 [Bacillus mycoides DSM 2048]
Length = 256
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+NA ++AIV+ G + GT + ++ LP +T+A S + A KKG E
Sbjct: 21 PIQANAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKQDAIAAHKKGHE 79
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
I+ +PM+ + + +++ NRL +++ G+ N+ G+ + +++
Sbjct: 80 VIIHMPMEPIRGKKEWLGPKAITTDLSDEEINNRLEQAIQEIPHAIGMNNHMGSKVTADE 139
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+I K GL + D ++P ++ + +L +P + L+ DD I ++ +
Sbjct: 140 RIVRLILSACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTVSHISKQAQ 199
Query: 343 GLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
L + + + + + + +I + + + LS LA LS PS
Sbjct: 200 LLIKKIQDKPIMVAIGHVGAPGEITSRIIETSIPKIREHA-DFIFLSDLA-LSPPS 253
>gi|317051484|ref|YP_004112600.1| hypothetical protein Selin_1309 [Desulfurispirillum indicum S5]
gi|316946568|gb|ADU66044.1| protein of unknown function DUF610 YibQ [Desulfurispirillum indicum
S5]
Length = 426
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 49/257 (19%), Positives = 103/257 (40%), Gaps = 9/257 (3%)
Query: 146 AKNKVGREDTEVPAMDKNFCSN-------ASGARIAIVVSGLGISQTGTQRAINLLPANI 198
V ++ VP ARIAI++ G + ++A+ + P +
Sbjct: 155 EPEGVPMDEIPVPPRPGTPLEPLQVEEPWEKPARIAIILDDAGDNFQLAKQAVQIHP-AV 213
Query: 199 TLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLR 258
TL+ + + G E +L PM+A + L T +++ +
Sbjct: 214 TLSILPKRPFSREISQLLDRMGLEYMLHQPMEAQN-PLINPGWAALLTTMDEEEIRSTFT 272
Query: 259 YSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLN 318
+L G G+ N+ G+ + + ++ + A+R L F D ++ + +A +
Sbjct: 273 AALESLPGVAGINNHMGSRFTQDPDRLRIVMEMIAERDLYFIDSYTTSDSQAYAVATEFQ 332
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVR 378
+ D+++D++ D + I +L L A+ G AIG+ +IE + ++ +
Sbjct: 333 VSSGFRDVFIDNESDVEAILRQLDILVRDAQRYGSAIGIGHVRSRTIEALEEFTGRLEEM 392
Query: 379 DVSVVPLSCLAKLSSPS 395
+V +V S + P+
Sbjct: 393 NVELVTPSVIVSHRKPA 409
>gi|324325449|gb|ADY20709.1| divergent polysaccharide deacetylase [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 256
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVEAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPLKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|30261433|ref|NP_843810.1| hypothetical protein BA_1349 [Bacillus anthracis str. Ames]
gi|47777922|ref|YP_017970.2| hypothetical protein GBAA_1349 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184267|ref|YP_027519.1| hypothetical protein BAS1250 [Bacillus anthracis str. Sterne]
gi|52144005|ref|YP_082824.1| divergent polysaccharide deacetylase [Bacillus cereus E33L]
gi|65318702|ref|ZP_00391661.1| COG2861: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|118476904|ref|YP_894055.1| divergent polysaccharide deacetylase [Bacillus thuringiensis str.
Al Hakam]
gi|165870470|ref|ZP_02215125.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167639335|ref|ZP_02397607.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686852|ref|ZP_02878072.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706221|ref|ZP_02896682.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177651538|ref|ZP_02934327.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568129|ref|ZP_03021039.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196035274|ref|ZP_03102679.1| conserved hypothetical protein [Bacillus cereus W]
gi|196040679|ref|ZP_03107978.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196046501|ref|ZP_03113726.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|218902539|ref|YP_002450373.1| hypothetical protein BCAH820_1422 [Bacillus cereus AH820]
gi|225863295|ref|YP_002748673.1| hypothetical protein BCA_1386 [Bacillus cereus 03BB102]
gi|227815821|ref|YP_002815830.1| hypothetical protein BAMEG_3245 [Bacillus anthracis str. CDC 684]
gi|228932713|ref|ZP_04095586.1| hypothetical protein bthur0009_11890 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228945030|ref|ZP_04107391.1| hypothetical protein bthur0007_11960 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229090385|ref|ZP_04221628.1| hypothetical protein bcere0021_12140 [Bacillus cereus Rock3-42]
gi|229602452|ref|YP_002865845.1| hypothetical protein BAA_1418 [Bacillus anthracis str. A0248]
gi|254682505|ref|ZP_05146366.1| hypothetical protein BantC_01448 [Bacillus anthracis str.
CNEVA-9066]
gi|254726167|ref|ZP_05187949.1| hypothetical protein BantA1_27540 [Bacillus anthracis str. A1055]
gi|254733921|ref|ZP_05191635.1| hypothetical protein BantWNA_01941 [Bacillus anthracis str. Western
North America USA6153]
gi|254753779|ref|ZP_05205814.1| hypothetical protein BantV_14988 [Bacillus anthracis str. Vollum]
gi|254758876|ref|ZP_05210903.1| hypothetical protein BantA9_11259 [Bacillus anthracis str.
Australia 94]
gi|301052972|ref|YP_003791183.1| divergent polysaccharide deacetylase [Bacillus anthracis CI]
gi|30255287|gb|AAP25296.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47551627|gb|AAT30445.2| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178194|gb|AAT53570.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|51977474|gb|AAU19024.1| conserved hypothetical protein; possible divergent polysaccharide
deacetylase [Bacillus cereus E33L]
gi|118416129|gb|ABK84548.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|164713965|gb|EDR19487.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512774|gb|EDR88148.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170128755|gb|EDS97621.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669375|gb|EDT20118.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172082816|gb|EDT67879.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560863|gb|EDV14838.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195991951|gb|EDX55914.1| conserved hypothetical protein [Bacillus cereus W]
gi|196022685|gb|EDX61367.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196028469|gb|EDX67077.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|218538662|gb|ACK91060.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|225786406|gb|ACO26623.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|227004833|gb|ACP14576.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228692968|gb|EEL46686.1| hypothetical protein bcere0021_12140 [Bacillus cereus Rock3-42]
gi|228814699|gb|EEM60959.1| hypothetical protein bthur0007_11960 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228826971|gb|EEM72732.1| hypothetical protein bthur0009_11890 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229266860|gb|ACQ48497.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|300375141|gb|ADK04045.1| conserved hypothetical divergent polysaccharide deacetylase
[Bacillus cereus biovar anthracis str. CI]
Length = 256
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|206977562|ref|ZP_03238456.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217958908|ref|YP_002337456.1| hypothetical protein BCAH187_A1488 [Bacillus cereus AH187]
gi|229138118|ref|ZP_04266716.1| hypothetical protein bcere0013_12420 [Bacillus cereus BDRD-ST26]
gi|206744280|gb|EDZ55693.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217063675|gb|ACJ77925.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645463|gb|EEL01697.1| hypothetical protein bcere0013_12420 [Bacillus cereus BDRD-ST26]
Length = 256
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVEAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|332703283|ref|ZP_08423371.1| protein of unknown function DUF610 YibQ [Desulfovibrio africanus
str. Walvis Bay]
gi|332553432|gb|EGJ50476.1| protein of unknown function DUF610 YibQ [Desulfovibrio africanus
str. Walvis Bay]
Length = 505
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ AR+AIV+ LG S ++ L + A + ++ R A+K E +L
Sbjct: 216 GAKARLAIVIDDLGESVEFASN-LSRLGIPVAFAIWPSASNSQRIAALARKAHMEVLLHQ 274
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ ++ + ++ + + +L G+ N+ G+ ++ V
Sbjct: 275 PMEPRSYPEDDPGKGAMFISMNEAAIRAVIMENLAHFPMAVGLNNHMGSRFTEDRRGMSV 334
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ E RGL + D +S +++ + K P + D++LD+ D D I +L+ E +
Sbjct: 335 VMDELRSRGLFYLDSMTSAKSVGTSVGKKAGTPVLRRDVFLDNVADVDAIFLQLRKAENV 394
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
A G+A+ + + E+++ + W+ Q R V V LS L +
Sbjct: 395 ALKHGKAVAIGHPYPETLQALRTWVAQRDTR-VEAVTLSSLLHPA 438
>gi|325275726|ref|ZP_08141608.1| hypothetical protein G1E_20175 [Pseudomonas sp. TJI-51]
gi|324099130|gb|EGB97094.1| hypothetical protein G1E_20175 [Pseudomonas sp. TJI-51]
Length = 259
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 100/231 (43%), Gaps = 7/231 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A ++I++ LG S R + LP +T+A + + ++A K G+
Sbjct: 20 AQAAPAGKTYMSIIIDDLGQSPNRDSRTLA-LPGPVTMAIMPDTPHATDFARQAHKAGKT 78
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL +PM Y ++L RL +L + G+ N+ G+ + + +
Sbjct: 79 VILHMPMDPAT------GPYAWHPGIAGEELARRLDSALLKVPYAAGINNHMGSRMTAQR 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E + E +R L F D +S + A L ++ D++LDD + I +L+
Sbjct: 133 EPMAWLMGELQRRHLFFVDSRTSAATVAAAEAQAQGLAHVSRDVFLDDVRTTEAIAGQLQ 192
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+A G A+ + + +++EV+++ L + + ++++ L + S
Sbjct: 193 QGVALAHKQGSAVLIGHPYPQTLEVLARELPRLKSQGITLLGLPQMIAERS 243
>gi|283850893|ref|ZP_06368179.1| protein of unknown function DUF610 YibQ [Desulfovibrio sp. FW1012B]
gi|283573816|gb|EFC21790.1| protein of unknown function DUF610 YibQ [Desulfovibrio sp. FW1012B]
Length = 378
Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 65/378 (17%), Positives = 133/378 (35%), Gaps = 9/378 (2%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
K P + ++ + + L F ++ L + V + P+ + P P
Sbjct: 5 KGPGKAPARAKAGEKRHIVLPGKPFYAVVAGLALAASLVVLVLVLFGPFPPLPTDHPSPA 64
Query: 72 TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTI 131
+I + + + ++ + + + + T + P
Sbjct: 65 AKAGDIRHLAAAASKPRRPAGEHGPARLAESTPRQAELPFEEHLAGRETPPP--NPAPAS 122
Query: 132 EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA-SGARIAIVVSGLGISQTGTQRA 190
E R+++ + + +A G R+ +V+ +G R
Sbjct: 123 EVRVVM----EAAPPAGTAAPGPADTEPDAHPVPGDAGKGPRMVVVIDDIG-DHPVMARN 177
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ LP +TLA N +A + G E IL PMQ L
Sbjct: 178 LMELPIPVTLAILPNRPRTRSIAAQAAEHGLEIILHQPMQPGSYPRVNPGPGALFPDMDE 237
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+++ L +L + G+ N+ G+ S+ + +GL F D +S +
Sbjct: 238 KRIQATLTDNLSQLPHVVGINNHMGSAFTSDGPGMAAVMPILKAKGLFFMDSVTSATSAA 297
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + +P+ ++LD+ + I +LK E A G+AI + + E+ E +
Sbjct: 298 PEAARRAGVPFYRRAVFLDNVRNTRTILGQLKTAERHALKHGRAIAIGHPYGETYEALKI 357
Query: 371 WLQQEHVRDVSVVPLSCL 388
W ++ R +++V L+ L
Sbjct: 358 WAKERDPR-IALVTLTEL 374
>gi|229029103|ref|ZP_04185201.1| hypothetical protein bcere0028_12050 [Bacillus cereus AH1271]
gi|228732201|gb|EEL83085.1| hypothetical protein bcere0028_12050 [Bacillus cereus AH1271]
Length = 244
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 101/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 3 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 61
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 62 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 121
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 122 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 181
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + LS LA
Sbjct: 182 ISKQAQLLIKKIQEKPIMVAIGHVGPPGEITSRVIETSIPNIREHA-DFIFLSDLALSPP 240
Query: 394 PSS 396
P S
Sbjct: 241 PVS 243
>gi|222095065|ref|YP_002529125.1| hypothetical protein BCQ_1405 [Bacillus cereus Q1]
gi|221239123|gb|ACM11833.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 256
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+PA + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPAFLFPIETKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|167634468|ref|ZP_02392789.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|254740389|ref|ZP_05198080.1| hypothetical protein BantKB_05133 [Bacillus anthracis str. Kruger
B]
gi|167530356|gb|EDR93082.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
Length = 256
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSAKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|229195628|ref|ZP_04322394.1| hypothetical protein bcere0001_11950 [Bacillus cereus m1293]
gi|228587877|gb|EEK45929.1| hypothetical protein bcere0001_11950 [Bacillus cereus m1293]
Length = 256
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+PA + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPAFLFPIEAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|42780521|ref|NP_977768.1| hypothetical protein BCE_1447 [Bacillus cereus ATCC 10987]
gi|42736441|gb|AAS40376.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 256
Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVEAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|228926462|ref|ZP_04089534.1| hypothetical protein bthur0010_11810 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228833286|gb|EEM78851.1| hypothetical protein bthur0010_11810 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 256
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVLKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|229183625|ref|ZP_04310848.1| hypothetical protein bcere0004_11970 [Bacillus cereus BGSC 6E1]
gi|228599868|gb|EEK57465.1| hypothetical protein bcere0004_11970 [Bacillus cereus BGSC 6E1]
Length = 244
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 3 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 61
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 62 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 121
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 122 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVPKIGKELGVPIIENQLFFDDVYTAAH 181
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 182 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 240
Query: 394 PSS 396
P S
Sbjct: 241 PVS 243
>gi|323141912|ref|ZP_08076773.1| divergent polysaccharide deacetylase [Phascolarctobacterium sp. YIT
12067]
gi|322413659|gb|EFY04517.1| divergent polysaccharide deacetylase [Phascolarctobacterium sp. YIT
12067]
Length = 423
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G ++ +N + A ++ K KG+ +L +PM
Sbjct: 204 RGKVAIVIDDCGYDMAPVRKLLNTG-LPFSYAILPYKQYSSDVLEMVKAKGRVPMLHLPM 262
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ D S + + T++ + + L+ R +L G GV N++G+ ++K++ V+
Sbjct: 263 EPIDRSAMSEGAATIRTDLSAAEKLSLTRRALNSLPGVMGVNNHQGSKATADKDTMRVVL 322
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+E ++ L F D ++ ++ R +A +L++ D++LD+ D IR+++ +A
Sbjct: 323 QELRRQKLFFVDSRTNSASVARNMAQQLDVSTARNDIFLDNSSDVQAIRQQIYKAFAMAE 382
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G I + A + + + + ++ VP++ L
Sbjct: 383 KNGSVIAICHARPNTAKCWEMYAAEFKRTGITFVPVTELL 422
>gi|229120971|ref|ZP_04250213.1| hypothetical protein bcere0016_12800 [Bacillus cereus 95/8201]
gi|228662631|gb|EEL18229.1| hypothetical protein bcere0016_12800 [Bacillus cereus 95/8201]
Length = 256
Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSIVPKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|228914003|ref|ZP_04077625.1| hypothetical protein bthur0012_12400 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845608|gb|EEM90637.1| hypothetical protein bthur0012_12400 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 256
Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 101/243 (41%), Gaps = 5/243 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ + A ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPVQAKAHTNKVAIVIDDFGNNMKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL ++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIHEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P+++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPKSVVLKIGKELGVPIIENQLFFDDVYTAAH 193
Query: 337 IREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
I ++ + L + + + + + + VI + + + LS LA
Sbjct: 194 ISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRVIETSIPKIREHA-DFIFLSDLALSPP 252
Query: 394 PSS 396
P S
Sbjct: 253 PVS 255
>gi|16127669|ref|NP_422233.1| hypothetical protein CC_3439 [Caulobacter crescentus CB15]
gi|221236488|ref|YP_002518925.1| hypothetical protein CCNA_03552 [Caulobacter crescentus NA1000]
gi|13425155|gb|AAK25401.1| hypothetical protein CC_3439 [Caulobacter crescentus CB15]
gi|220965661|gb|ACL97017.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 394
Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats.
Identities = 86/359 (23%), Positives = 143/359 (39%), Gaps = 13/359 (3%)
Query: 35 TFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQ 94
F+ ++ +LI+ + + +I E + + +
Sbjct: 45 LFLASVATLVLITSDP--HAGSPVIRLELTKIGATKNAPEGWREALGGDPAHEAGLLPGE 102
Query: 95 LKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLS---KKELLAKNKVG 151
L ++ + S V + +I P + + + GLS L
Sbjct: 103 LGLSANPFGPIMAKAESEAPVAEGLENAPAIPQGPGLPQAPLAGLSAPGPGGGLLPIIAA 162
Query: 152 REDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDR 211
T A + F N +++IV+ GLG++ T+ AI LP +TL+FA L
Sbjct: 163 DGRTAAEAYARPFTPNGR-PKVSIVIGGLGLNAQTTRAAIETLPGEVTLSFAPYAEGLQG 221
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
W+ A+ G E +L+ PM+ D N+ YTL + +L + + R TGYFG+
Sbjct: 222 WIDLARAHGHEVLLETPMEPADYPANDPGPYTLIAANRPDDTVRKLEWLMSRATGYFGLS 281
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
NY GA + N ++ RGL F DDG + R +P AD +DD+
Sbjct: 282 NYLGARFVDNDQAMNTFNATLKARGLAFIDDGLAARRAGP-------IPRASADRVIDDE 334
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ I +L+ LE A GQ++G A+ +I + W R + + P S LA
Sbjct: 335 LSASAIDAQLRALETGAAARGQSLGSGFAYPVTINQVRAWAAGLQARGIQLAPASALAH 393
>gi|301155117|emb|CBW14581.1| predicted polysaccharide deacetylase [Haemophilus parainfluenzae
T3T1]
Length = 280
Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++AIV+ +G I +P I++A ++AK + + ++ +PMQ
Sbjct: 28 GKLAIVIDDIGYHPKEDAE-ILAMPKEISVAIIPAAPYAKIRNQQAKAQNHDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
E+ TL + Q+ R++ + G+ N+ G+ ++ +
Sbjct: 87 PVSNIKIEEGGLTL--GLSEAQVNERVKKAKSIVPNAIGMNNHMGSAATADTTLMTYLMS 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + + + AR
Sbjct: 145 ALREQHLFFLDSRTIGKSVAGKIAKEQGVRVLDRHIFLDDSDNLVDVQRQFQNAIQYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + ++ V+ ++ D+ +V + L +
Sbjct: 205 HGTAIAIGHPRPNTVAVLKSGIKNLP-DDIQLVGMGSLWR 243
>gi|118580822|ref|YP_902072.1| hypothetical protein Ppro_2408 [Pelobacter propionicus DSM 2379]
gi|118503532|gb|ABL00015.1| protein of unknown function DUF610, YibQ [Pelobacter propionicus
DSM 2379]
Length = 342
Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats.
Identities = 66/377 (17%), Positives = 127/377 (33%), Gaps = 40/377 (10%)
Query: 14 PKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTI 73
P RK+ + I+ + Y+L++ + + V + + +
Sbjct: 6 PNRKNQSRGGGPTYAALAILAVVILAVIGYLLLT--PRKRPFQPLSPPVAGKESRPKVHR 63
Query: 74 PLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEE 133
P D +P + T+ + + KP + P E
Sbjct: 64 PGQRADLPAPPRVTPETLPATPPSVPPETP-------------VKPPLKPEYPAEPPSE- 109
Query: 134 RLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL 193
E +PA R+AI++ +G R++
Sbjct: 110 ------------------VEKAPLPA-----VVPGGKGRLAIIIDDMGAGM-REARSLAA 145
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+ +T A S A G E ++ +PMQ+ +S L V +
Sbjct: 146 IGVPLTFAIIPGLRSCREVAAFAAGNGIETMIHLPMQSKGWPQQRLESNGLLVAMEEADI 205
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
R+ R G N+ G+ ++ + RGL F D ++PR++ + L
Sbjct: 206 RERMEGFARDVPHAVGANNHMGSEFTEHEPQMSTVLGVLKGRGLFFIDSVTTPRSVGQRL 265
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A ++ + ++LD++ + IR +L AR G AI + +I ++ L
Sbjct: 266 AREMGVRSGRRSVFLDNEQNGAYIRGQLNQAVRQARKNGGAIAICHPHPATIATLAAALP 325
Query: 374 QEHVRDVSVVPLSCLAK 390
+ V++VP S L +
Sbjct: 326 TLQQQGVTLVPASRLVR 342
>gi|332994651|gb|AEF04706.1| hypothetical protein ambt_15995 [Alteromonas sp. SN2]
Length = 280
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+ I++ LG ++ A LP+ +T + ++A+++G+ +L +PM
Sbjct: 31 KPRVIIILDDLGYRKSDM--AAFALPSEVTFSILPRTPLAQTISRKAEQQGRAVMLHMPM 88
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q+ L + + LR +L+ GV N+ G+ + + + I
Sbjct: 89 QSTSGKA--MGPLGLSTDMYPAAITHTLRAALKSVPNAVGVNNHMGSAFTVEEPAMQTIM 146
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+E ++GL F D +S + +A ++ +P ++LD+ + ++ + + +A+
Sbjct: 147 EEIKRQGLFFVDSRTSVNTTAQQVADRVGVPNASRQVFLDNDRSEASLSKQFEYTKRLAK 206
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
G + +A + E+I ++ L +++ +
Sbjct: 207 RNGTVVVIAHPYPETITFLAHTLPSLATEGIALASV 242
>gi|220936444|ref|YP_002515343.1| protein of unknown function DUF610 YibQ [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997754|gb|ACL74356.1| protein of unknown function DUF610 YibQ [Thioalkalivibrio sp.
HL-EbGR7]
Length = 279
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
IAI++ LG QR + LP +T+A + EA +G+E +L +
Sbjct: 32 PPRPFIAIIIDDLGNQPGPGQRTLA-LPGPVTVAVLPHTPFARPLANEAHAQGKEVMLHL 90
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQA + + V + L +L GV N+ G++L + +
Sbjct: 91 PMQATE--ALPLGPGGITVDMEREALRETFLAALASVPHVRGVNNHMGSLLTRHIGHMDW 148
Query: 288 IFKEFAKR-GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD-RDKIREKLKGLE 345
E A + GL F D ++ ++ + +A LP D++LD D + + ++ L
Sbjct: 149 FMAELAAQSGLYFVDSRTTALSVAQRVALHHGLPATRRDVFLDTLPDNEEFVEAQMDQLI 208
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+A+ G A+ + + +++V+ + L H + +VP+S
Sbjct: 209 SLAQRRGHALAIGHPYGATLDVLERRLATLHEAGIELVPVSE 250
>gi|295687690|ref|YP_003591383.1| hypothetical protein Cseg_0245 [Caulobacter segnis ATCC 21756]
gi|295429593|gb|ADG08765.1| protein of unknown function DUF610 YibQ [Caulobacter segnis ATCC
21756]
Length = 393
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 84/378 (22%), Positives = 146/378 (38%), Gaps = 12/378 (3%)
Query: 15 KRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIP 74
+ K + +G C F+ L+ +L++ + + +I
Sbjct: 25 RGKLGAALANPYIGAGGAACLFLASLATLVLVTSDP--HAGNPVVRLELTKIGATKNAPE 82
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEER 134
E + S + ++L+ + + +
Sbjct: 83 GWREALTAESPHEAPLKPSELQLSRAPFPAAGAEAGEKPAFEGEQPPPPVQQGPGLPQAP 142
Query: 135 LILGLSKKELLAKNKVGREDTE--VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAIN 192
+ + A + D A + F N ++++V+ GLG++ T+ AI
Sbjct: 143 IAGLTAPGPGGAPLPIIAPDGRTAADAYARPFTPNGR-PKVSVVIGGLGLNAQTTRAAIE 201
Query: 193 LLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQ 252
LPA ITL+FA L W+ A++ G E +L+ PM+ D N+ YTL +
Sbjct: 202 TLPAEITLSFAPYAEGLQGWIDLAREHGHEVLLETPMEPADYPANDPGPYTLIAANRPED 261
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRV 312
+ +L + + R TGYFG+ NY GA + N ++ RGL F DDG + R
Sbjct: 262 TVRKLEWLMSRATGYFGLANYLGARFVDNDQAMATFNTVLKTRGLAFIDDGLAARRSGP- 320
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+P AD +DD++ I +L+ LE A GQ++G A+ +I + W
Sbjct: 321 ------IPRASADRVIDDELSASAIDAQLRALENGASARGQSLGSGFAYPVTINQVRLWA 374
Query: 373 QQEHVRDVSVVPLSCLAK 390
R + + P S LA
Sbjct: 375 AGLQARGLQLAPASALAH 392
>gi|78356483|ref|YP_387932.1| hypothetical protein Dde_1438 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218888|gb|ABB38237.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 488
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 56/316 (17%), Positives = 109/316 (34%), Gaps = 13/316 (4%)
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQ-----IQNDISGKTVVNKPTRSTSIDSLPTIEERLIL 137
P+ + + + + V+ R TS P E +
Sbjct: 178 PAATLQQAAGGAWRISLDGVVTHALAFAVLQEQEPQLPVDGQHRGTSEAGTPLPEAQDDA 237
Query: 138 GLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
G + + + G T++ + + R+AIV+ +G S +R + L
Sbjct: 238 GSPDAAVTGRPESGAAATQIQERENDL------PRLAIVIDDIGESMRAVERLVA-LEYP 290
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
+TL+ R + G E ++ PM+ L V+ T Q+ L
Sbjct: 291 VTLSIWPRATYARRAADYGWQHGCEIMIHQPMEPVGYPRVNPGPGALFVSMTPDQIHTVL 350
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
+L G+ N+ G+ + + + E R L D + ++ A
Sbjct: 351 GENLGMVPHAVGINNHMGSRFTQDDAGVQAVVDELRGRKLFVLDSVTHGGSVLYRKAAAA 410
Query: 318 NLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHV 377
L ++LD D+ I +L +A G AI + E++ + +W Q+
Sbjct: 411 GLHAFRRSVFLDVVRDKKSIMHQLDKAAGVALRQGTAIAIGHPTPETLAALEEW-QRVRS 469
Query: 378 RDVSVVPLSCLAKLSS 393
R + +V ++ L K+
Sbjct: 470 RKIQIVSVAGLDKVRH 485
>gi|297570178|ref|YP_003691522.1| protein of unknown function DUF610 YibQ [Desulfurivibrio
alkaliphilus AHT2]
gi|296926093|gb|ADH86903.1| protein of unknown function DUF610 YibQ [Desulfurivibrio
alkaliphilus AHT2]
Length = 359
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 129/285 (45%), Gaps = 9/285 (3%)
Query: 112 GKTVVNKPTRSTSIDSLPTIE---ERLILGLSKKELLAKNKVGREDTEVPAMD---KNFC 165
G + +P T + P E G ++ A ++ T P +
Sbjct: 73 GDSFRAEPPGVTDSEPDPREERLAAPPDQGFPERGTTAADQAAATTTPTPQPITETRPAP 132
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
++ R+A+++ +G S ++ + L +T +F + + + +G+ +L
Sbjct: 133 ADDPRPRLALIIDDMGYSPEIEEKMLG-LDLELTFSFIPFAPQRQQILNRTRAQGRAILL 191
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+P++A D+ +N+ L + ++++ +L GV N+ G+ +++ +
Sbjct: 192 HLPLEALDDKWNKA-PGLLATGMSEEEIVTGFTAALNEIPMATGVSNHMGSRFTADRRAM 250
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+V+ + + L F D ++P ++ +A +L +P++ D+++D + ++IR ++ L
Sbjct: 251 QVLLAQLPRYDLYFLDSLTTPDSVGAEIAAELGIPFLRRDIFIDHHREPEQIRTQIDRLL 310
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IA G A+G+ + E++ V+ + + + R V +V L L K
Sbjct: 311 NIAEKRGWAVGLGHPYPETLRVLQEKEGELNRR-VRLVKLDQLVK 354
>gi|167854745|ref|ZP_02477524.1| hypothetical protein HPS_10725 [Haemophilus parasuis 29755]
gi|167854159|gb|EDS25394.1| hypothetical protein HPS_10725 [Haemophilus parasuis 29755]
Length = 281
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A ++ IV+ +G + AI LP + +A + +AK++G+E
Sbjct: 21 FAPLAYANKLVIVIDDIGY-RIKEDNAIYTLPKEVNVAIIPSAPYATARANKAKEQGREI 79
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ + E L V ++ + + ++ + N+ G+ ++K
Sbjct: 80 LIHLPMQPKVKQPIEAG--ALLVGMGESEVSELIHQAQQQVPYAIALNNHMGSKATADKT 137
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + K +++GL F D ++ ++ A L + ++LD+ ++ + +
Sbjct: 138 TMQHLMKALSQQGLGFLDSKTAGDSVAYQTAKAYGLNALERHIFLDNSDVFADVQRQFQH 197
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ AR G AI + SI V+ + D+ + LS L K
Sbjct: 198 AVQYARKHGIAIMIGHPRKHSIAVLELGIANLPA-DIQLASLSSLWK 243
>gi|303246510|ref|ZP_07332789.1| protein of unknown function DUF610 YibQ [Desulfovibrio
fructosovorans JJ]
gi|302492220|gb|EFL52095.1| protein of unknown function DUF610 YibQ [Desulfovibrio
fructosovorans JJ]
Length = 374
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 70/380 (18%), Positives = 135/380 (35%), Gaps = 21/380 (5%)
Query: 12 KTPKR---KSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAP 68
K+P R ++ + ++ +S+ +L F G + V+R
Sbjct: 9 KSPARAKAGGKRKVVLPGRPYIAVIAGLVLAISLGVLAMLLF-GPFPPLPLDHVVRNAKA 67
Query: 69 IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSL 128
+ P+ K + + + ++ S +T P + +
Sbjct: 68 GHVRQPVAATVKPRHPSKPPHEARAVAHDAQPAALPFEEHLPSTET----PPNGSQV--- 120
Query: 129 PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQ 188
R+ + + T+ P + A G R+ +V+ +G + +
Sbjct: 121 -----RIKVEPAAPAAPPSPPAAEPATQSP---QPAEDTAKGPRMVVVIDDIGDNPVMAR 172
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
R + LP +TLA N E G E IL PMQ L
Sbjct: 173 R-LMELPFPVTLAILPNRPHTRSLAAEIAAHGNETILHQPMQPISYPRVNPGPGALFTDM 231
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+++ L ++ + G+ N+ G+ S++ + + GL F D +SP +
Sbjct: 232 DTRRIQTTLSENIAQLPHIVGINNHMGSAFTSDQAGMDAVMPVLKAHGLFFMDSVTSPAS 291
Query: 309 LTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
A K + Y ++LD+ + I +LK E A G+AI + ++E+ E +
Sbjct: 292 AAAEAARKAGVHYYRRAVFLDNVRNVRTILGQLKTAERHALKHGRAIAIGHPYNETYEAL 351
Query: 369 SQWLQQEHVRDVSVVPLSCL 388
W ++ VS+V L+ L
Sbjct: 352 LLWAKERDPH-VSLVTLTEL 370
>gi|256830630|ref|YP_003159358.1| hypothetical protein Dbac_2867 [Desulfomicrobium baculatum DSM
4028]
gi|256579806|gb|ACU90942.1| protein of unknown function DUF610 YibQ [Desulfomicrobium baculatum
DSM 4028]
Length = 433
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 144 LLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA 203
L + + A R+ I++ LG S +R + LP ++ +
Sbjct: 190 LGEPTHHIFLPLALVPESEPEVQTAKAPRLVIIIDDLGESMAVAKR-LAALPFAVSFSVL 248
Query: 204 SNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN-EDDSYTLKVTQTVQQLLNRLRYSLR 262
+ + A+++ E +L +P + TL+V T L L +L
Sbjct: 249 PHNTKARQVSNLARQENLELLLHLPCEPEGYPKTANSGPGTLRVNMTPADLEQTLADNLA 308
Query: 263 RGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYM 322
R GV N+ G+ L +K++ ++ +G F D ++P++ R ++ L + Y
Sbjct: 309 RLPDVDGVNNHMGSRLTQDKKAMTIVLGHLQGQGKFFVDSLTTPKSCVRDVSNTLGMRYY 368
Query: 323 VADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
++LD+ + +LK E +A+ TG A+ + + ++ + W RD++V
Sbjct: 369 RRHIFLDNTAKEHAVLLQLKKAESLAKRTGLAVAIGHPYPATLSALESWA---KSRDMNV 425
Query: 383 V 383
V
Sbjct: 426 V 426
>gi|322418639|ref|YP_004197862.1| hypothetical protein GM18_1111 [Geobacter sp. M18]
gi|320125026|gb|ADW12586.1| protein of unknown function DUF610 YibQ [Geobacter sp. M18]
Length = 318
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 2/262 (0%)
Query: 129 PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA-RIAIVVSGLGISQTGT 187
P+ L + + + K+ A G R+AI++ +G S
Sbjct: 57 PSASAPKHLPVPPRPAPVQQKLSTASAPAQKTHPAALPKAQGPGRLAIIIDDMGTS-VQE 115
Query: 188 QRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247
+ + + +T + + + + A G E ++ +PM+ + +S + V
Sbjct: 116 LKTLQSIGLPLTYSVIPSLAHARQIAEGAHAAGAEVMIHMPMEPEGYPKQKLESIGVLVA 175
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPR 307
++ +R++ R G N+ G+ + + +V+ + ++GL F D +SP
Sbjct: 176 MNDGEIADRIKSYFRTVPYAVGANNHMGSRFTQHADKMQVVLQVLKEKGLFFVDSKTSPA 235
Query: 308 NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV 367
++ A + L ++LD+ D I +L IAR G AI + ++
Sbjct: 236 SVGYSEARGMGLKCASRQVFLDNVQDEAAIGRQLAQAAAIARKKGAAIAICHPHPATLRA 295
Query: 368 ISQWLQQEHVRDVSVVPLSCLA 389
+ ++ + ++ V S L
Sbjct: 296 LKLYMPELAKSGITFVHASDLT 317
>gi|325576789|ref|ZP_08147404.1| divergent polysaccharide deacetylase [Haemophilus parainfluenzae
ATCC 33392]
gi|325160995|gb|EGC73113.1| divergent polysaccharide deacetylase [Haemophilus parainfluenzae
ATCC 33392]
Length = 280
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++AIV+ +G + +P I++A +EAK + + ++ +PMQ
Sbjct: 28 GKLAIVIDDIGYHPKEDAEVLA-MPKEISVAIIPAAPYAKIRNQEAKAQNHDILIHMPMQ 86
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
E+ TL + Q+ R++ + G+ N+ G+ ++ +
Sbjct: 87 PVSNIKIEEGGLTL--GLSEAQVNERVKKAKAIVPNAIGMNNHMGSAATADATLMTYLMT 144
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
++ L F D + +++ +A + + + ++LDD + ++ + + + AR
Sbjct: 145 ALREQHLFFLDSRTIGKSVAGKIAKEQGVRVLDRHIFLDDSDNLVDVQRQFQSAIQYARK 204
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + ++ V+ ++ D+ +V + L +
Sbjct: 205 HGTAIAIGHPRPNTVAVLKSGIKNLP-DDIQLVGMGSLWR 243
>gi|116053282|ref|YP_793605.1| hypothetical protein PA14_67820 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115588503|gb|ABJ14518.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 257
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
++ + +V+ LG + +R ++ LP +TLA +EA ++G+
Sbjct: 22 QDPVPYQRPPLLTVVIDDLGQNLARDRRVLD-LPPGVTLAIIPETPHAAELAREAHQRGR 80
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
IL +PM Y + T ++ RL +L + G+ N+ G+ + +
Sbjct: 81 TVILHMPMDPAG------GPYAWRPELTQEERARRLDAALAKVPFVQGLNNHEGSRMTAV 134
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + +E +RGL D +S + A ++ L + D++LD++ + + +L
Sbjct: 135 RPAMAWLAEELQRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQL 194
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ +AR G A+ + +++V+++ L + + + +VP L
Sbjct: 195 QAGIALARKQGSALLIGHPHKATLDVLARELPKLRAQGIELVPPQMLI 242
>gi|94264377|ref|ZP_01288168.1| Protein of unknown function DUF610, YibQ [delta proteobacterium
MLMS-1]
gi|93455206|gb|EAT05422.1| Protein of unknown function DUF610, YibQ [delta proteobacterium
MLMS-1]
Length = 359
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 113/271 (41%), Gaps = 3/271 (1%)
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ + S P E + A + + + + R+A++V
Sbjct: 90 PPTEADASAPATHEPAAAPEPEPRATAVDPLEPAPLLPITPPQPPLAEDPRPRLALIVDD 149
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
+G + T+ + +T +F + L ++ A+ + +E +L +P++A DE +NE
Sbjct: 150 MGY-RPATELQLLARDWELTFSFIPFADHLYEVLETARLQEREILLHLPLEAQDERWNEA 208
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLF 299
L + +L + GV N+ G+ ++ + E + + A L F
Sbjct: 209 -PGMLLTAMDDAAIATGFADALAQVPMAVGVNNHMGSRFTADARAMEALMAQVAHYDLFF 267
Query: 300 FDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV 359
D ++ ++ A + +P++ DL+LD+ D KI LK L EIA G A+G+
Sbjct: 268 LDSLTTANSVADQAAARHQVPFLKRDLFLDNDQDPGKIIANLKRLLEIAEERGYAVGICH 327
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ ++ + + + V +VPLS L +
Sbjct: 328 PYPATVTALQDFYPRL-AEKVRLVPLSVLYE 357
>gi|303239963|ref|ZP_07326485.1| protein of unknown function DUF610 YibQ [Acetivibrio cellulolyticus
CD2]
gi|302592442|gb|EFL62168.1| protein of unknown function DUF610 YibQ [Acetivibrio cellulolyticus
CD2]
Length = 282
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S+ +IAIV+ G + G + ++ + ++T A K+A +KG E I
Sbjct: 54 QSDKPAGKIAIVIDDFGQDRNGVKEMMS-INRHLTFAVMPFLTYSQSDAKDAFEKGFEVI 112
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM+ + + T + ++ +L G + G+ + +N
Sbjct: 113 VHLPMEPVSGKISWLGPKPILSTLSDTEVYEITSEALTNVPYAVGANIHMGSKISTNDRI 172
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + G+ F D +S +++ + +A + + + +++LD Q ++ ++E+L+
Sbjct: 173 MSDVLDIIKQNGIYFLDSKTSAKSVAKKIAAEKAVAFYERNVFLDGQTSKEHVKEQLRKA 232
Query: 345 EEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCL 388
IA G++I + + + I + L + +++ +V +S L
Sbjct: 233 GAIALKDGKSIAIGHVGIEGGKVTAQAIIEMLPEFDEKNIQLVFVSEL 280
>gi|228964394|ref|ZP_04125508.1| hypothetical protein bthur0004_12430 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795251|gb|EEM42743.1| hypothetical protein bthur0004_12430 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 221
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+P+ +NA ++AIV+ G + GT + ++ LP +T+A S A
Sbjct: 15 LPSFLFPIQANAHTNKVAIVIDDFGNNMKGTNQMLS-LPIPLTVAVMPFLPSTKEDAIAA 73
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
KKG E I+ +PM+ + + +++ NRL +++ G+ N+ G+
Sbjct: 74 HKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGS 133
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ +++ +I K GL + D ++P ++ + +L +P + L+ DD
Sbjct: 134 KVTADERIVRLILAACKKHGLFYLDSKTNPNSVVPKIGKELGVPIIENQLFFDDVYTAGH 193
Query: 337 IREKLKGLEE 346
I ++ + L +
Sbjct: 194 ISKQAQLLIK 203
>gi|310641393|ref|YP_003946151.1| protein [Paenibacillus polymyxa SC2]
gi|309246343|gb|ADO55910.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 311
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 94/229 (41%), Gaps = 5/229 (2%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
N R+A+++ LG + GT+ +N LP IT+A + + EA +G + I
Sbjct: 65 QQNQQQKRVAVIIDDLGNNMKGTKEILN-LPVKITVAVMPFLPTTKQDAMEAHNRGHDVI 123
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM+ +K T +++ ++ +++ G+ N+ G+ + S+K
Sbjct: 124 VHLPMEPKQGKPEWLGPGAIKANMTDEEVRAKVTAAIKDVPYAIGMNNHMGSKVTSDKRI 183
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
++ + GL F D ++ ++ LA K +P + D++LDD + +L +
Sbjct: 184 MSIVLDVCKEHGLFFVDSRTNYWSVVPELAAKKGMPPVRNDVFLDDVHTLAHVNRQLSKV 243
Query: 345 EEIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E + + + + + + V +S L +
Sbjct: 244 VEWLAEHNTCVTIGHVGVSGMYTSSGLHSSVPKLKEHA-QFVGISDLVR 291
>gi|317128473|ref|YP_004094755.1| hypothetical protein Bcell_1761 [Bacillus cellulosilyticus DSM
2522]
gi|315473421|gb|ADU30024.1| protein of unknown function DUF610 YibQ [Bacillus cellulosilyticus
DSM 2522]
Length = 266
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 5/230 (2%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
N S R AI++ G + G + +N IT+A + K A + G E I+
Sbjct: 27 NHSVYRAAIIIDDFGGNTGGVKEFMNA-DVPITMAIMPFLDESTEQAKRANELGFEVIIH 85
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P++ + + ++ R+ ++ G+ N+ G+ ++ N+
Sbjct: 86 MPLEPKKGKRSWLGPLPITADLETDEVKRRVEKAIENVPHAKGINNHMGSKIVGNERIVR 145
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ-VDRDKIREKLKGLE 345
I + K GL D G+S ++ +A +LN+PY + D +LDD R+ + +++ L
Sbjct: 146 AILEVAKKHGLYVIDSGTSGDSVVPEIAEELNIPYGIRDTFLDDSFSSRNHVYKQMIKLC 205
Query: 346 EIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+I + GQAI + +++ I L +++ +VP+S L
Sbjct: 206 DIVKKHGQAIAIGHVGVKGNDTFNGIQDALPHLEEKNIQIVPMSHLLNTK 255
>gi|15600328|ref|NP_253822.1| hypothetical protein PA5135 [Pseudomonas aeruginosa PAO1]
gi|218894234|ref|YP_002443103.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa LESB58]
gi|254243986|ref|ZP_04937308.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296391985|ref|ZP_06881460.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa PAb1]
gi|313110177|ref|ZP_07796076.1| hypothetical protein PA39016_002260002 [Pseudomonas aeruginosa
39016]
gi|9951434|gb|AAG08520.1|AE004926_10 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126197364|gb|EAZ61427.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218774462|emb|CAW30279.1| putative divergent polysaccharide deacetylas [Pseudomonas
aeruginosa LESB58]
gi|310882578|gb|EFQ41172.1| hypothetical protein PA39016_002260002 [Pseudomonas aeruginosa
39016]
Length = 257
Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
++ + +V+ LG + +R ++ LP +TLA +EA ++G+
Sbjct: 22 QDPVPYQRPPLLTVVIDDLGQNLARDRRVLD-LPPGVTLAIIPETPHAAELAREAHQRGR 80
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
IL +PM Y + T ++ RL +L + G+ N+ G+ + +
Sbjct: 81 TVILHMPMDPAG------GPYAWRPELTQEERARRLDAALAKVPFVQGLNNHEGSRMTAV 134
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + +E +RGL D +S + A ++ L + D++LD++ + + +L
Sbjct: 135 RPAMAWLAEELQRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQL 194
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ +AR G A+ + +++V+++ L + + + +VP L
Sbjct: 195 QAGVALARKQGSALLIGHPHKATLDVLARELPKLRAQGIELVPPQMLI 242
>gi|167945841|ref|ZP_02532915.1| hypothetical protein Epers_04577 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 240
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
G +RA+ L +T +F + + +A + +E +L +PM++ +
Sbjct: 6 GNLMQRGERALA-LRGKVTYSFLPHTPYARQQADQAYRLEREVMLHLPMESLE--ALPLG 62
Query: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
L T Q+ L ++ G+ N+ G+M+ ++ + + GL F
Sbjct: 63 EGALLTGMTSQEQAEVLAAAVSSVPHLAGINNHMGSMMTADGVAMQQFMALIRDTGLFFL 122
Query: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
D ++ + L A + + D++LD+ + IR + K L +AR+ G AIG+A
Sbjct: 123 DSRTTDKTLAEQSAQENLVATGRRDVFLDNLRQPEAIRAQFKRLLALARSQGHAIGIAHP 182
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E++EV+ L + + + +VP+S L
Sbjct: 183 HPETLEVLEALLPELEQQGIRLVPVSQLIN 212
>gi|107104231|ref|ZP_01368149.1| hypothetical protein PaerPA_01005304 [Pseudomonas aeruginosa PACS2]
gi|254238163|ref|ZP_04931486.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126170094|gb|EAZ55605.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 257
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
++ + +V+ LG + +R ++ LP +TLA +EA ++G+
Sbjct: 22 QDPAPYQRPPLLTVVIDDLGQNLARDRRVLD-LPPGVTLAIIPETPHAAELAREAHQRGR 80
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
IL +PM Y + T ++ RL +L + G+ N+ G+ + +
Sbjct: 81 TVILHMPMDPAG------GPYAWRPELTQEERARRLDAALAKVPFVQGLNNHEGSRMTAV 134
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + +E +RGL D +S + A ++ L + D++LD++ + + +L
Sbjct: 135 RPAMAWLAEELQRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQL 194
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ +AR G A+ + +++V+++ L + + + +VP L
Sbjct: 195 QAGVALARKQGSALLIGHPHKATLDVLARELPKLRAQGIELVPPQMLI 242
>gi|319956136|ref|YP_004167399.1| hypothetical protein Nitsa_0380 [Nitratifractor salsuginis DSM
16511]
gi|319418540|gb|ADV45650.1| protein of unknown function DUF610 YibQ [Nitratifractor salsuginis
DSM 16511]
Length = 340
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 113/273 (41%), Gaps = 8/273 (2%)
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
TV P + + + E+R+ GL ++L+ K + + K +S
Sbjct: 66 STVTVAPKQPSLVGEEYPKEDRVGFGL--EDLIEKTRKRAKGKNESPSTKATPKKSSSPE 123
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+ +++ + SQ AI LP +T + +++ + K + ++ P+++
Sbjct: 124 LVLIIDDV--SQPRQLAAIRKLPFPVTPSIFPPS-QMNKHTPKLAKGLRHYMIHFPLESG 180
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ N + TL V ++ R+ + N+ G++ SN + ++
Sbjct: 181 SKKMNRFE-KTLFVRDDPAKVRKRVEEIRHLFPSARFLNNHTGSVFTSNYRAMYRLYGFL 239
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
K G +F D +S + R +A + ++PY+ D++LD+ +R +LK +A+ G
Sbjct: 240 KKEGFIFLDSRTSGHSKVRKIAAEYHMPYLGRDVFLDNVQIPQAVRTQLKRAVRLAKKRG 299
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
AI + ++ V+ Q + V V L
Sbjct: 300 YAIAIGHPHPVTLRVLKQAASLL--KGVKAVYL 330
>gi|315497340|ref|YP_004086144.1| hypothetical protein Astex_0295 [Asticcacaulis excentricus CB 48]
gi|315415352|gb|ADU11993.1| protein of unknown function DUF610 YibQ [Asticcacaulis excentricus
CB 48]
Length = 410
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/376 (23%), Positives = 147/376 (39%), Gaps = 26/376 (6%)
Query: 30 FLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDN- 88
+ FI G ++++ +S + + P + S
Sbjct: 45 LMALGLFIGGGALFLSLS-DPEAGNPTIQIAAATTAAPKADAHAPDIATADDAASGLQAF 103
Query: 89 ---------NTVCNQLK---NDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLI 136
+ +Q I S V + S + I
Sbjct: 104 TLDSLGLFKDASADQFNANGEAGPADGTAIITLPSDGAPVTVGSASKL--PASPLAPAPI 161
Query: 137 LGLSKKELLAKNKVGREDTEVPA--MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL 194
GLS+ D VPA + F SN ++++V GLG++ T T+ AI L
Sbjct: 162 AGLSQNGPNGPLPAIATDGRVPASAYARPFKSNGK-PMVSLIVGGLGLNPTTTKAAIEQL 220
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLL 254
PA +TL+F + L W+ A+ +G E +++IPM+ + + TL V Q +
Sbjct: 221 PAEVTLSFVPHAEGLQGWIDAARAQGHEVLIEIPMEPTNYPDTDPGPRTLLVGQRPDDMN 280
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
L + + R TGYFGVMNY+G+ L +K S RGL F DDG R++
Sbjct: 281 ASLNWLMARATGYFGVMNYQGSAYLRDKGSMTAFLNVMKARGLAFIDDGQ-ARDVGG--- 336
Query: 315 PKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
AD +D Q++ I +L +E A+ G+A+G A+ ++ V +W Q
Sbjct: 337 ---GWTRASADRVIDAQINSQSINAQLAAIEAQAKARGRALGSGFAYPVTLAVAIKWTQS 393
Query: 375 EHVRDVSVVPLSCLAK 390
+ + + P S + +
Sbjct: 394 LEQKGLQLAPASAIMR 409
>gi|308068509|ref|YP_003870114.1| hypothetical protein PPE_01740 [Paenibacillus polymyxa E681]
gi|305857788|gb|ADM69576.1| Polysacc_deac_2 domain containing protein [Paenibacillus polymyxa
E681]
Length = 311
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+A+++ LG + GT++ +N LP IT+A + + EA K+G + I+ +PM+
Sbjct: 73 VAVIIDDLGNNMKGTEQILN-LPVKITVAVMPFLPTTKQDAMEAHKRGHDVIVHLPMEPK 131
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+K T +++ ++ +++ G+ N+ G+ + S+K ++
Sbjct: 132 QGKPEWLGPGAIKANMTDEEVRAKVTAAIKDVPYAIGMNNHMGSKVTSDKRIMSIVLDVC 191
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ GL F D ++ ++ LA K +P + D++LDD + +L + E
Sbjct: 192 KEHGLFFVDSRTNYWSVVPELAAKKGMPPVRNDVFLDDVHTLAHVNRQLTKVVEWLDEHN 251
Query: 353 QAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ + + + + + V +S L +
Sbjct: 252 TCVTIGHVGVSGMYTSSALHSSVPKLKEHA-KFVGISDLVR 291
>gi|329122701|ref|ZP_08251279.1| divergent polysaccharide deacetylase superfamily protein
[Haemophilus aegyptius ATCC 11116]
gi|327472575|gb|EGF18005.1| divergent polysaccharide deacetylase superfamily protein
[Haemophilus aegyptius ATCC 11116]
Length = 280
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 ISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|83644204|ref|YP_432639.1| hypothetical protein HCH_01349 [Hahella chejuensis KCTC 2396]
gi|83632247|gb|ABC28214.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 286
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 3/229 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
IAI++ +G Q +RAI +PA +TL+F + + A G+E +
Sbjct: 31 AGEDHPPTIAIIIDDMGNYQNMGERAIR-IPAPLTLSFLPFRPHTNSQARLAYAAGKEIM 89
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
L IPM+ + + L + Q ++ R +++ GV N+ G+ L N+ +
Sbjct: 90 LHIPME--NVKRIPLGASGLTSDMSSQNMVATFRQAIKAIPYVSGVNNHMGSALTQNRAA 147
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
++ E L F D ++ ++ +A +P + D++LD + I + K L
Sbjct: 148 MNLVMGELQGYPLYFVDSRTTASSVAHAVAANHAIPTLNRDVFLDHVITTKAIDFQFKRL 207
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+IAR G AI + E+IE + + L + V++ + L + +
Sbjct: 208 LDIARKKGTAIAIGHPHRETIEYLEKVLPSLGEQGVAIATIKGLWAIRN 256
>gi|229844623|ref|ZP_04464762.1| hypothetical protein CGSHi6P18H1_03404 [Haemophilus influenzae
6P18H1]
gi|229812337|gb|EEP48027.1| hypothetical protein CGSHi6P18H1_03404 [Haemophilus influenzae
6P18H1]
Length = 280
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARVRNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 ISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + I+ + K AR
Sbjct: 146 LQEKHLFFLDSRTVGKSVAGKVAKEQGVRSLDRHIFLDDSNEFADIQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GTAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|254282675|ref|ZP_04957643.1| Divergent polysaccharide deacetylase superfamily [gamma
proteobacterium NOR51-B]
gi|219678878|gb|EED35227.1| Divergent polysaccharide deacetylase superfamily [gamma
proteobacterium NOR51-B]
Length = 252
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 4/236 (1%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A C+ S R+AI++ LG S A N LPA +TL+ + +
Sbjct: 14 APIATACNEVSHPRLAIIIDDLGYSLNRGLDAAN-LPAPLTLSIIPHTPHAHSIATVGVE 72
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
+G+E ++ +PM++ + D L + +L G GV N+ G+ L
Sbjct: 73 QGKEIMVHMPMESTKVPPS--DPVVLTTALADDDFEATIDAALLSVPGATGVNNHMGSKL 130
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
+N+ E + F D ++ ++ +A + +P ++LD+ D +I
Sbjct: 131 TTNRPLMERFMARVLDNSMFFIDSRTTAESVAADVATAMAVPNTERSVFLDNTRDPVQIE 190
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+L IA G A+ + + E+++V++Q L + V +VP S L P
Sbjct: 191 NQLLEAVSIALHAGDAVAIGHPYPETLKVLAQALPRLPSA-VQLVPASALTGCRLP 245
>gi|308051460|ref|YP_003915026.1| hypothetical protein Fbal_3759 [Ferrimonas balearica DSM 9799]
gi|307633650|gb|ADN77952.1| protein of unknown function DUF610 YibQ [Ferrimonas balearica DSM
9799]
Length = 263
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
Query: 164 FCSNAS-GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
FC A G R+++++ +G + RA LP +TLAF + +A ++ +E
Sbjct: 27 FCGLAHAGPRLSLIIDDIGAREA--DRAALTLPTEVTLAFLPHTPWGRELALQAWRQDRE 84
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+L +PM + ++ Q Q+ R++ +L GV N+ G+ + +
Sbjct: 85 LMLHLPM--GTTGPKSPGPWAIEPGQDRWQVQYRVKKALADIPFVTGVNNHMGSAVTPDP 142
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + + +GL F D ++ + A + D++LD + ++
Sbjct: 143 DRMAWVMEVLSLKGLYFVDSVTTSDSRAYEQALAWGVATKKRDVFLDPDRAEGTLEKQWA 202
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A G+ + + + E++ + L +++ +VPLS L
Sbjct: 203 EALRQADKFGEVVVIGHPYPETLTFLEATLPTLAEQNIQLVPLSTL 248
>gi|218888242|ref|YP_002437563.1| hypothetical protein DvMF_3159 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759196|gb|ACL10095.1| protein of unknown function DUF610 YibQ [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 543
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 2/228 (0%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
GAR+AIV+ +G S + + + L +T + + A K +E
Sbjct: 318 PVAVAPGGARLAIVIDDIGESMSAARD-LAALDYPVTFSVWPRSTHAREAAELAHKARRE 376
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM+ + + Q Q++ +R ++RR G+ N+ G+ N
Sbjct: 377 VMIHLPMEPVRYPQVKPGPGAILSGQQPQEMAALVRDAVRRVPYAVGLNNHMGSRATQNA 436
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + G+ D + P + A + LP +++LD D+ I +L
Sbjct: 437 AAMRTVCEALDGTGMFVLDSMTHPASKLYFEAKRAGLPAYKRNVFLDVIADKRNIMFQLD 496
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IA+ GQAI + E++ + +W + R V++V + L+
Sbjct: 497 KAARIAQAEGQAIAIGHPLPETVAALKEWART-RDRTVTIVTVRQLSH 543
>gi|1074506|pir||C64158 hypothetical protein HI0755 - Haemophilus influenzae (strain Rd
KW20)
Length = 284
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 33 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 91
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 92 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 149
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 150 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 209
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 210 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 247
>gi|319897746|ref|YP_004135943.1| hypothetical protein HIBPF15550 [Haemophilus influenzae F3031]
gi|317433252|emb|CBY81627.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 280
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARVRNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 ISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GTAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|260579846|ref|ZP_05847676.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260093130|gb|EEW77063.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 281
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 30 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 88
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 89 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 146
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 147 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 206
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 207 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 244
>gi|30995399|ref|NP_438914.2| hypothetical protein HI0755 [Haemophilus influenzae Rd KW20]
gi|1176306|sp|P44863|Y755_HAEIN RecName: Full=Uncharacterized protein HI_0755; Flags: Precursor
Length = 280
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|145636690|ref|ZP_01792357.1| hypothetical protein CGSHiHH_03778 [Haemophilus influenzae PittHH]
gi|229845802|ref|ZP_04465914.1| hypothetical protein CGSHi7P49H1_03098 [Haemophilus influenzae
7P49H1]
gi|145270216|gb|EDK10152.1| hypothetical protein CGSHiHH_03778 [Haemophilus influenzae PittHH]
gi|229810806|gb|EEP46523.1| hypothetical protein CGSHi7P49H1_03098 [Haemophilus influenzae
7P49H1]
Length = 280
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|301169472|emb|CBW29073.1| predicted polysaccharide deacetylase [Haemophilus influenzae 10810]
Length = 280
Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|145630498|ref|ZP_01786278.1| hypothetical protein CGSHi22421_04483 [Haemophilus influenzae
R3021]
gi|144983888|gb|EDJ91330.1| hypothetical protein CGSHi22421_04483 [Haemophilus influenzae
R3021]
Length = 280
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 44/219 (20%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPHARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + L + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGLRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|261866855|ref|YP_003254777.1| divergent polysaccharide deacetylase superfamily protein
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|293391508|ref|ZP_06635842.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261412187|gb|ACX81558.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290952042|gb|EFE02161.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 275
Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ LG I LP +++A + ++A ++G++ ++ +
Sbjct: 21 AYSAKLAIVIDDLGYHPK-EDAQILALPKAVSVAIIPAAPYAKQRNQQAHQQGRDILIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + E L + +++ +R++ + + + G+ N+ G+ ++
Sbjct: 80 PMETVSKMKIEGGG--LHLGMNQEEVNHRVQTAKKIVSHAIGMNNHMGSAATADVPLMTK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +R L F D + R++ +A + + ++LDD D ++ + + +
Sbjct: 138 LMTALRERHLFFLDSRTIGRSVAGKIAKAQGVLALDRHIFLDDSNDLADVQRQFRAAVQY 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ G AI + +I V+ + DV +V + L +
Sbjct: 198 AQKHGTAIAIGHPRKNTIAVLQAGIINLPS-DVQLVSMGSLWR 239
>gi|307133063|ref|YP_003885079.1| putative periplasmic protein [Dickeya dadantii 3937]
gi|306530592|gb|ADN00523.1| Putative periplasmic protein [Dickeya dadantii 3937]
Length = 268
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ +P I++A N +A +G+E ++ +PM + E D TL+ +
Sbjct: 1 MLAMPTAISVAVLPNAPYARDMATKAHAQGREVLIHLPMAPMSKQPLERD--TLRPDMSS 58
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+++ LR ++ + G+ N+ G+ + ++ + + + L F D + +
Sbjct: 59 EEIARILRDAVNKVPYAVGLNNHMGSAMTASLPGMQKVMQAMTAYRLYFLDSMTIGSSQA 118
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
A + + ++LDD + IR + EIA+ +G AI + +I+V+ Q
Sbjct: 119 SRAAAGTGIKVLKRKVFLDDTQNVADIRRQFSRAVEIAQRSGYAIAIGHPHPTTIQVLQQ 178
Query: 371 WLQQEHVRDVSVVPLSCLAKLSSP 394
L D+ +V S L P
Sbjct: 179 MLPTLPA-DIVLVRPSQLLNEPEP 201
>gi|304322188|ref|YP_003855831.1| yibQ gene product [Parvularcula bermudensis HTCC2503]
gi|303301090|gb|ADM10689.1| yibQ gene product [Parvularcula bermudensis HTCC2503]
Length = 323
Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 13/296 (4%)
Query: 108 NDISGKTVV--NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-----EVPAM 160
G VV P R + + E G + K+ G D P+
Sbjct: 23 GSALGTMVVLSTSPARPSPEPLRNLVVEARAAGQAASPHAPKDDAGSIDLGEVHLRSPSP 82
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
+ RIA+V+ +G S R +N LP +T+AF M +A
Sbjct: 83 PWRRVDFHARPRIALVIDDMGYSWAAYDR-LNDLPVPLTMAFLPFSADAQE-MIDALWPR 140
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
+AI+ +PM+ E++ L + L +L + GY GV N+ G+ +
Sbjct: 141 HDAIVHLPMEPIAETHL-AGPGMLSTDMDADAIKWGLLAALSQLRGYSGVNNHTGSRFTA 199
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKI 337
++ V+ E +RGL F D ++PR + ++A + +++LD D + ++
Sbjct: 200 DRARMAVVLGELNRRGLFFLDSITTPRPVAHLIAEAEGFSVLERNVFLDSDYDTLTSQQV 259
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
R +L LE IA++ GQAIG+ + +++V+ +W + R S+V + LA
Sbjct: 260 RTQLAKLERIAQSEGQAIGIGHPYAITLDVVERWAEDVEARGFSLVLVKDLAPRPR 315
>gi|223041917|ref|ZP_03612102.1| hypothetical protein AM202_0513 [Actinobacillus minor 202]
gi|223017271|gb|EEF15698.1| hypothetical protein AM202_0513 [Actinobacillus minor 202]
Length = 282
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G S QR + LP I++A + + A + ++ ++ +
Sbjct: 25 AQAAKLAIVIDDIGYSVREDQR-VYQLPKEISVAIIPSAPYAKVRAENAFAQKRDILIHL 83
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + + L V ++ + L + +R G+ N+ G+ ++K +
Sbjct: 84 PMQPQNAQQAIEKP-ALLVGDDFEKARSLLENARQRVPYAIGLNNHMGSGATADKATMRH 142
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ A++ L F D + P ++ +A + + + ++LDD + + + + +
Sbjct: 143 FMQALAEQKLFFLDSKTGP-SVATKVAVEFGISALERHVFLDDSNEYHDVLHQFQQAKAY 201
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
AR G AI + SI+V+ + L+ D+ +V + L +
Sbjct: 202 ARKHGVAILIGHPRKNSIDVLEKELKTLPA-DIQLVSMGSLWRH 244
>gi|68249351|ref|YP_248463.1| hypothetical protein NTHI0914 [Haemophilus influenzae 86-028NP]
gi|145632108|ref|ZP_01787843.1| hypothetical protein CGSHi3655_06634 [Haemophilus influenzae 3655]
gi|68057550|gb|AAX87803.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
gi|144987015|gb|EDJ93545.1| hypothetical protein CGSHi3655_06634 [Haemophilus influenzae 3655]
Length = 280
Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRQNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|288555887|ref|YP_003427822.1| putative polysaccharide de-acetylase [Bacillus pseudofirmus OF4]
gi|288547047|gb|ADC50930.1| putative polysaccharide de-acetylase [Bacillus pseudofirmus OF4]
Length = 271
Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 6/233 (2%)
Query: 163 NFCSNASG-ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
F + A ++AIV+ G + G + + IT A +EA G
Sbjct: 26 PFTAQADEWKKVAIVIDDFGGNVKGVESFL-KGDIPITAAVMPFLEYSTEQAEEAHHAGL 84
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
E I+ +P++ + + + +++ R+ ++ G+ N+ G+ ++ +
Sbjct: 85 EVIIHLPLEPKKGKASWLGPKGITSDLSNEEVRKRVEEAIEDVPHAVGLNNHMGSKIVED 144
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV-DRDKIREK 340
+ VI + GL D G+S +++ LA + +PY + D++LDD + R + ++
Sbjct: 145 RRIMGVILDVVKEHGLYVIDSGTSNKSVISELAEERRIPYSIRDVFLDDSLSSRSHVAKQ 204
Query: 341 LKGLEEIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++ L+++A G AIG+ +E+ I L+ V +VP S + +
Sbjct: 205 MRLLQKVAAVEGDAIGIGHVGVKGEETAAGILSSLRDLEKNKVQIVPASHIIE 257
>gi|46143439|ref|ZP_00204471.1| COG2861: Uncharacterized protein conserved in bacteria
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208306|ref|YP_001053531.1| hypothetical protein APL_0830 [Actinobacillus pleuropneumoniae L20]
gi|307247817|ref|ZP_07529853.1| hypothetical protein appser2_8060 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250063|ref|ZP_07532027.1| hypothetical protein appser4_8510 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307256881|ref|ZP_07538659.1| hypothetical protein appser10_8850 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307261313|ref|ZP_07542988.1| hypothetical protein appser12_8790 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126097098|gb|ABN73926.1| hypothetical protein APL_0830 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306855619|gb|EFM87786.1| hypothetical protein appser2_8060 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857923|gb|EFM90015.1| hypothetical protein appser4_8510 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306864615|gb|EFM96520.1| hypothetical protein appser10_8850 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306869044|gb|EFN00846.1| hypothetical protein appser12_8790 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 282
Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A ++AIV+ +G +T AI LP +++A ++A ++ ++
Sbjct: 22 ISPLAQAGKLAIVIDDIGY-RTKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDV 80
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ + + +S L V + + + ++ + + G+ N+ G+ ++++
Sbjct: 81 LIHLPMQPKN-RHQPIESGALMVGASKENVARLIQAARNQVPYAIGLNNHMGSGATADRQ 139
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + E +K+ L F D + P ++ +A +L + + +L+LDD +++ +
Sbjct: 140 TMEHLMTELSKQQLFFLDSKTGP-SVAAKVARELGVNALERNLFLDDNDALHEVQNQFHL 198
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G AI + SIEV+ + L D+ +V + L +
Sbjct: 199 ALHYARKHGSAILIGHPRKNSIEVLEKGLANLP-EDIQLVSMGSLWR 244
>gi|319775305|ref|YP_004137793.1| hypothetical protein HICON_06450 [Haemophilus influenzae F3047]
gi|317449896|emb|CBY86108.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 280
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 ISAIKIEDGG--LHLGMSAAQVNDRVNTAKSIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFSDVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRQNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|332307949|ref|YP_004435800.1| hypothetical protein Glaag_3602 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175278|gb|AEE24532.1| protein of unknown function DUF610 YibQ [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 273
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
+G + A+ LP N+ ++ + + ++ A ++ +E +L +PM++
Sbjct: 45 DDVGNNHHRDAAALT-LPVNVAISILPHKHFSQKYALLAHEQRREYLLHMPMESMAGLKQ 103
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
E + L + + ++ L + G+ N+ G+ L + + GL
Sbjct: 104 E--ANVLLASMNDKTIVQTLHAAFASVPNALGMNNHMGSRLTQLETPMRTTMDYLHRHGL 161
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
+F D +S + +A + N+P + ++LD+ + DKI + L AR G++I +
Sbjct: 162 IFVDSRTSAQTQAEAIAKQQNVPALRRHVFLDNVLAEDKIALQFNLLVRKARKYGRSIAI 221
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++I + + L +V +VPLS +
Sbjct: 222 GHPHKQTIAYLQKRLPTLAQENVQLVPLSAML 253
>gi|83944752|ref|ZP_00957118.1| hypothetical protein OA2633_08994 [Oceanicaulis alexandrii
HTCC2633]
gi|83851534|gb|EAP89389.1| hypothetical protein OA2633_08994 [Oceanicaulis alexandrii
HTCC2633]
Length = 405
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 94/376 (25%), Positives = 152/376 (40%), Gaps = 11/376 (2%)
Query: 19 FYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIE 78
+ L + I+G++ ++ + + IE
Sbjct: 8 RFPLKAPLLAGLGVAAALIIGVAALT-----WLAGGPAPTISASADIAGQPEVLASAPIE 62
Query: 79 DKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILG 138
D L D +D G T LP + E G
Sbjct: 63 GDHGAPFSDGQADEVSLPGVRDTADALSAHDAGGHTTAQPAAPQAPPAPLPGLYENGPGG 122
Query: 139 LSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANI 198
L + G + A D F + ++++V GLG+SQ+ T+RAI +LPA +
Sbjct: 123 ----PLPVISASGERPDQAYAHD--FPGAENVPTVSVIVGGLGLSQSLTERAIEVLPAEV 176
Query: 199 TLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLR 258
TL+FA ++L W+ A+ G E +L++PM+ FD N+ +TL V + Q+ RL
Sbjct: 177 TLSFAPYADNLQDWINRARADGHEVLLELPMEPFDYPNNDPGPHTLLVDASSQENTRRLV 236
Query: 259 YSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLN 318
+ L R GY GV NY GA L + + IF E RGL F DG+ R + + +
Sbjct: 237 WLLSRAAGYTGVANYLGARLGAAEGPLSEIFSELEARGLSIFHDGAGRRAVLEQAGRQAH 296
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVR 378
+AD +D I +L LE +A G A+G A+ +++ I+ W + R
Sbjct: 297 ARMTIADRVVDSDPTPRAIDGRLLELEALALQNGSALGSGFAYPATVDTIAAWAEGLDGR 356
Query: 379 DVSVVPLSCLAKLSSP 394
+ P S + ++ SP
Sbjct: 357 GYQLAPASFVMQIRSP 372
>gi|148827945|ref|YP_001292698.1| hypothetical protein CGSHiGG_07270 [Haemophilus influenzae PittGG]
gi|148719187|gb|ABR00315.1| hypothetical protein CGSHiGG_07270 [Haemophilus influenzae PittGG]
Length = 280
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + A+ +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAVFAMPREISVAIIPAAPYARVRNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 ISAIKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRPNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|145628360|ref|ZP_01784161.1| hypothetical protein CGSHi22121_04945 [Haemophilus influenzae
22.1-21]
gi|144980135|gb|EDJ89794.1| hypothetical protein CGSHi22121_04945 [Haemophilus influenzae
22.1-21]
Length = 280
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSEAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L D+ +V + L +
Sbjct: 206 GSAIAIGHPRANTIAVLQAGLNNLP-EDIQLVGMGNLWR 243
>gi|205373558|ref|ZP_03226361.1| hypothetical protein Bcoam_09870 [Bacillus coahuilensis m4-4]
Length = 258
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 46/220 (20%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
AIV+ LG + GT+ I LP +T+A + + ++A K G E I+ +P++
Sbjct: 30 AIVIDDLGNNMKGTEE-ILQLPTILTVAVMPHLETSKEDAEKAHKLGHEVIIHLPLEPVR 88
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
+ ++ + +++ R+R +++ G+ ++ G+ +++ +I +
Sbjct: 89 GKKSWLGPGSITTDLSDEEIRKRVRLAIKSVPHAVGMNHHLGSKASADERVMRIILEVCK 148
Query: 294 KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE-EIARTTG 352
+ L + D +S +++ LA +L + Y+ +++LD + + K K LE +AR
Sbjct: 149 ENNLYYLDSKTSTQSVIPKLANELGVSYLENEIFLDHVGTIEHMVGKAKLLEKRLAREN- 207
Query: 353 QAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I + D+ +V+ +++ + VPLS L
Sbjct: 208 ELIAIGHVGITGDKMADVLREFIPEFEEIG-DAVPLSKLL 246
>gi|320354673|ref|YP_004196012.1| hypothetical protein Despr_2585 [Desulfobulbus propionicus DSM
2032]
gi|320123175|gb|ADW18721.1| protein of unknown function DUF610 YibQ [Desulfobulbus propionicus
DSM 2032]
Length = 294
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 51/301 (16%), Positives = 110/301 (36%), Gaps = 8/301 (2%)
Query: 90 TVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK 149
T + + +G P + E+ L K
Sbjct: 2 TAALATSLAGCRSPDAPERLPAGSVPTAAPPTRVLVSPTSLSEQFPSSA----SLSTKTP 57
Query: 150 VGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSL 209
R E A D N + A IAI++ +G ++ + L N+T +F
Sbjct: 58 PPRSAHERTA-DGNASTTAGRPEIAIIIDDMGNDLKMGRKFLE-LDDNLTFSFLPGAPHT 115
Query: 210 DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFG 269
++A + G+ ++ +PM+ D ++ + L + T + + + L G
Sbjct: 116 QELAEQAFQAGRTVLVHLPMEPKDTRWS-PGTEALHIADTEEGIRTKTETMLAAVPHAVG 174
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
N+ G+ + + +R L F D ++ + A +L +P ++LD
Sbjct: 175 TNNHMGSRFTEHGLGMHRVLTVLKERALFFVDSYTTAGSQGLATARRLAVPATRRHVFLD 234
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++ KI ++L L +AR G A+G+ +++ + ++ +++V + L
Sbjct: 235 NEKTPSKICDQLDQLALLARQQGHAVGIGHPNQAMFTALARCGPE-NMHHINLVSVQRLT 293
Query: 390 K 390
+
Sbjct: 294 R 294
>gi|149180684|ref|ZP_01859187.1| hypothetical protein BSG1_12141 [Bacillus sp. SG-1]
gi|148851474|gb|EDL65621.1| hypothetical protein BSG1_12141 [Bacillus sp. SG-1]
Length = 262
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 102/234 (43%), Gaps = 5/234 (2%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
+ + S+ ++IV+ G + GT+ + LP ++T+A ++ A +
Sbjct: 20 SAKEPEPSSLKKRSLSIVIDDFGNNMEGTKEMLE-LPISLTVAVMPLMDTTKEDADLAHR 78
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G E I+ +PM+ + + + +++ R+ ++ G+ ++ G+
Sbjct: 79 LGHEVIVHMPMEPLKGKRSWLGPGAITTDLSNEEIRKRVEAAIDSVPFAVGMNHHMGSRA 138
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
+++ V+ +RGL + D ++P+++ LA ++ +P + +++ DD I
Sbjct: 139 SADERVMRVVLTVCKERGLYYLDSRTTPKSVIPELAEEIGVPLLENEMFFDDIYTTRHIV 198
Query: 339 EKLKGLEEIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLA 389
++ + + + I + + + V+ +++ ++ + VPLS L
Sbjct: 199 KQANRVVKRLEKDDEVIAIGHVGITGTKMVNVLREYIP-VYLNEAKAVPLSELI 251
>gi|260581569|ref|ZP_05849366.1| conserved hypothetical protein [Haemophilus influenzae NT127]
gi|260095162|gb|EEW79053.1| conserved hypothetical protein [Haemophilus influenzae NT127]
Length = 281
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 30 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 88
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 89 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 146
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 147 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 206
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 207 GSAIAIGHPRQNTIAVLQAGLRNLP-EDIQLVGMGNLWR 244
>gi|327395759|dbj|BAK13181.1| periplasmic protein YibQ [Pantoea ananatis AJ13355]
Length = 258
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A + + +A + G+E ++ +PM + E TL + ++
Sbjct: 1 MPQAISVAVLPDAPYARQMAIKAHQGGREVLIHLPMAPLSKQPLEK--NTLTPEMSRAEI 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R ++ G+ N+ G+ + S+ + + + + L F D + + +
Sbjct: 59 DRIIRSAVNNVPYAVGLNNHMGSKMTSSLPGMQKVMQALNQYNLYFLDSMTIGNSQSLQA 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A ++ + ++LDD D + IR++ +A+ G AI + ++ V+ Q L
Sbjct: 119 AQGTHVRVLKRRVFLDDSQDINAIRQQFNRAVTLAQRDGYAIAIGHPHPNTVRVLQQMLP 178
Query: 374 QEHVRDVSVVPLSCLAK 390
D+++V L
Sbjct: 179 SLPA-DITLVTPGQLLN 194
>gi|145634834|ref|ZP_01790542.1| hypothetical protein CGSHiAA_04498 [Haemophilus influenzae PittAA]
gi|145640840|ref|ZP_01796422.1| hypothetical protein CGSHiR3021_07222 [Haemophilus influenzae
R3021]
gi|148826600|ref|YP_001291353.1| hypothetical protein CGSHiEE_08325 [Haemophilus influenzae PittEE]
gi|145268000|gb|EDK07996.1| hypothetical protein CGSHiAA_04498 [Haemophilus influenzae PittAA]
gi|145274354|gb|EDK14218.1| hypothetical protein CGSHiR3021_07222 [Haemophilus influenzae
22.4-21]
gi|148716760|gb|ABQ98970.1| hypothetical protein CGSHiEE_08325 [Haemophilus influenzae PittEE]
gi|309973749|gb|ADO96950.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 280
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G + AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGY-HSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L D+ +V + L +
Sbjct: 206 GSAIAIGHPRANTIAVLQAGLNNLP-EDIQLVGMGNLWR 243
>gi|190150156|ref|YP_001968681.1| hypothetical protein APP7_0887 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251312|ref|ZP_07337490.1| hypothetical protein APP6_0513 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252454|ref|ZP_07534350.1| hypothetical protein appser6_9710 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307263494|ref|ZP_07545109.1| hypothetical protein appser13_9100 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915287|gb|ACE61539.1| hypothetical protein APP7_0887 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649854|gb|EFL80032.1| hypothetical protein APP6_0513 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860046|gb|EFM92063.1| hypothetical protein appser6_9710 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306871137|gb|EFN02866.1| hypothetical protein appser13_9100 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 282
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A ++AIV+ +G + AI LP +++A ++A ++ ++
Sbjct: 22 ISPLAQAGKLAIVIDDIGY-RAKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDV 80
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ + + +S L V + + + ++ + + G+ N+ G+ ++++
Sbjct: 81 LIHLPMQPKN-RHQPIESGALMVGASKENVARLIQAARNQVPYAIGLNNHMGSGATADRQ 139
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + E +K+ L F D + P ++ +A +L + + +L+LDD +++ +
Sbjct: 140 TMEHLMTELSKQQLFFLDSKTGP-SVAAKVARELGVNALERNLFLDDNDALHEVQNQFHL 198
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G AI + SIEV+ + L D+ +V + L +
Sbjct: 199 ALHYARKHGSAILIGHPRKNSIEVLEKGLANLP-EDIQLVSMGSLWR 244
>gi|145638449|ref|ZP_01794059.1| hypothetical protein CGSHiII_06744 [Haemophilus influenzae PittII]
gi|145272778|gb|EDK12685.1| hypothetical protein CGSHiII_06744 [Haemophilus influenzae PittII]
gi|309751584|gb|ADO81568.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 280
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRQNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|52426374|ref|YP_089511.1| hypothetical protein MS2319 [Mannheimia succiniciproducens MBEL55E]
gi|52308426|gb|AAU38926.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 281
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 98/224 (43%), Gaps = 4/224 (1%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
A A++AIV+ LG AI +P I++A + + + A ++G++ ++
Sbjct: 25 PAFSAKLAIVIDDLGY-HPREDAAILAMPKEISVAIIPSAPYARQRNQLAYEQGRDILIH 83
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+PMQ + E L + QQ+ + ++ + + G+ N+ G+ +++
Sbjct: 84 MPMQPISQMNIEAGG--LSIGMDAQQVAHNVQQAKNIVSHAIGMNNHMGSAATADRPLMT 141
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ E K+ L F D + R++ +A + + + ++LDD ++ + +
Sbjct: 142 ELMAELRKQHLFFLDSRTIGRSVAEKIAKESGVRALQRHIFLDDSDVYGDVQRQFQQAIH 201
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G AI + ++ V+ Q L D+ +V + L +
Sbjct: 202 YARKHGTAIVIGHPRKNTVAVLRQGLANLPP-DIQLVSMGSLWR 244
>gi|152985938|ref|YP_001351189.1| hypothetical protein PSPA7_5870 [Pseudomonas aeruginosa PA7]
gi|150961096|gb|ABR83121.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 258
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ + +V+ LG + +R ++ LP+ +TLA +EA ++G+
Sbjct: 23 QESAPYQRPPLLTVVIDDLGQNLARDRRVLD-LPSGVTLAIIPETPHAAELAREAHQRGR 81
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
IL +PM Y + T ++ RL +L + G+ N+ G+ + +
Sbjct: 82 TVILHMPMDPAG------GPYAWRPELTQEERARRLDAALAKVPFVQGLNNHEGSRMTAV 135
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + +E +RGL D +S + A ++ L + D++LD++ + + +L
Sbjct: 136 RPAMAWLAEELQRRGLYLVDSRTSAATVAASEAQRIGLASVSRDVFLDNEATPEAVSAQL 195
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ +AR G A+ + +++V+++ L + + + +VP L
Sbjct: 196 QAGVALARRQGSALLIGHPHKATLDVLARELPKLRAQGIELVPPQMLI 243
>gi|152978251|ref|YP_001343880.1| protein of unknown function DUF610 YibQ [Actinobacillus
succinogenes 130Z]
gi|150839974|gb|ABR73945.1| protein of unknown function DUF610 YibQ [Actinobacillus
succinogenes 130Z]
Length = 294
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 103/234 (44%), Gaps = 5/234 (2%)
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
V A F + ++AIV+ +G I +P +++A + ++A
Sbjct: 29 VSAQPARFVAAQPH-KLAIVIDDIGYHPK-EDAQILAMPKAVSVAIIPVAPYAAQRNRQA 86
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
++G++ ++ +PMQ + E+ L V + Q++ R++ + + + G+ N+ G+
Sbjct: 87 WQQGRDILIHMPMQPVNNMKIEEGG--LSVGMSQQEVEQRVQRAKQIVSHAIGMNNHMGS 144
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ + + ++GL F D + +++ +A + + ++LDD +
Sbjct: 145 AATADPTLMTRLMRILQRQGLFFLDSRTIGKSVAGKIAKLEGVSVLERHVFLDDSDNFGD 204
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
++ + + + AR G AI + +I V+ L+ D+ +V + L +
Sbjct: 205 VQRQFQRALQHARQHGVAIVIGHPRKNTIAVLQAELRHLPA-DIQLVGMGQLWR 257
>gi|48243737|gb|AAT40842.1| hypothetical protein [Haemophilus influenzae]
Length = 280
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++AIV+ +G AI +P I++A +EAK +G++ ++ +PMQ
Sbjct: 29 KLAIVIDDVGYHLK-EDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQP 87
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
ED L + + Q+ +R+ + G+ N+ G+ ++ + +
Sbjct: 88 VSAVKIEDGG--LHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTA 145
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
++ L F D + +++ +A + + + ++LDD + ++ + K AR
Sbjct: 146 LQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKH 205
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G AI + +I V+ L+ D+ +V + L +
Sbjct: 206 GSAIAIGHPRQNTIAVLQAGLRNLP-EDIQLVGMGNLWR 243
>gi|307245693|ref|ZP_07527779.1| hypothetical protein appser1_8960 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254662|ref|ZP_07536490.1| hypothetical protein appser9_9020 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259107|ref|ZP_07540837.1| hypothetical protein appser11_9050 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853395|gb|EFM85614.1| hypothetical protein appser1_8960 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862335|gb|EFM94301.1| hypothetical protein appser9_9020 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866774|gb|EFM98632.1| hypothetical protein appser11_9050 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 282
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A ++AIV+ +G + AI LP +++A ++A ++ ++
Sbjct: 22 ISPLAQAGKLAIVIDDIGY-RAKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDV 80
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ + + +S L V + + + ++ + + G+ N+ G+ ++++
Sbjct: 81 LIHLPMQPKN-RHQPIESGALMVGASKENVARLIQAARNQVPYAIGLNNHMGSGATADRQ 139
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + E +K+ L F D + P ++ +A +L + + +L+LDD +++ +
Sbjct: 140 TMEHLMTELSKQQLFFLDSKTGP-SVAAKVARELGVNALERNLFLDDNDALHEVQNQFHL 198
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G AI + SIEV+ + L D+ +V + L +
Sbjct: 199 ALHYARKHGSAILIGHPRKNSIEVLEKGLANLP-EDIQLVSMGSLWR 244
>gi|325289668|ref|YP_004265849.1| protein of unknown function DUF610 YibQ [Syntrophobotulus
glycolicus DSM 8271]
gi|324965069|gb|ADY55848.1| protein of unknown function DUF610 YibQ [Syntrophobotulus
glycolicus DSM 8271]
Length = 282
Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 98/236 (41%), Gaps = 7/236 (2%)
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
D+ + +IA+++ G ++ G I + ++T A EA K+G
Sbjct: 48 DEAVNAGKGKPKIAVIIDDFGEARDGVNE-IMKIKKHLTFAVMPFLTYTTSDATEAHKRG 106
Query: 221 QEAILQIPMQAFD-ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
E I+ +PMQ+ ++ N + + + ++ + S+ GV + G++
Sbjct: 107 YEVIVHMPMQSQTVDNINWLGRRPIMLKTSNDEIKKIAKESIDSVPHAVGVNIHMGSLAS 166
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD-QVDRDKIR 338
N+ + + R L F D ++P + + +A + + ++ +++L+ + I
Sbjct: 167 QNERVISNVMEVVKARNLYFVDSRTTPNTVCKAVAKRFGVKFLQRNIFLEHSSKTKGYIE 226
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCLAK 390
+L E+A G A+ + E + +V+ + + + + + V S L K
Sbjct: 227 GQLVEAGELALKEGYAVVIGHVGAEGGAITAQVLEEMIPKLESKGIEFVYASELLK 282
>gi|332289073|ref|YP_004419925.1| Divergent polysaccharide deacetylase [Gallibacterium anatis UMN179]
gi|330431969|gb|AEC17028.1| Divergent polysaccharide deacetylase [Gallibacterium anatis UMN179]
Length = 273
Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 105/222 (47%), Gaps = 4/222 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+ A++AIV+ +G + AI LP + +A + + K+A ++G++A++ +P
Sbjct: 20 NAAQLAIVIDDIGY-RAHEDNAIFALPLAVNVAIIPSAPYAQQRAKQAHQQGRDALIHMP 78
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQ E + L T Q+ +R+ + G+ N+ G+ S+ ++
Sbjct: 79 MQPKSNIKLEANGLVL--GLTPAQVSHRIDLAQNIVPNAIGMNNHMGSAATSDSGLMHIL 136
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
++ A+RGL F D + ++ +A + + + +++LDD + I+++ + + A
Sbjct: 137 MQQLAQRGLSFLDSKTIGSSVAGKIAKQYGVSALERNIFLDDNNEYANIQQQFQQAIQYA 196
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
R AI + +I V+ Q L Q D+ +V +S L +
Sbjct: 197 RKHQTAIVIGHPRKNTIAVLQQQLSQLPA-DIELVKISRLWQ 237
>gi|167648681|ref|YP_001686344.1| hypothetical protein Caul_4726 [Caulobacter sp. K31]
gi|167351111|gb|ABZ73846.1| protein of unknown function DUF610 YibQ [Caulobacter sp. K31]
Length = 395
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTE--VPAMDKNFCSNASGARIAIVVSGLGISQT 185
P L + V D A + F ++ ++A+V+ GLG++
Sbjct: 138 GPLPAAPLAGFYTPGPGGGVLPVIAPDGRTAAEAYARPFTADGR-PKVALVIGGLGLNPQ 196
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
T+ AI LP ITL+FA L W+ A+ G E +L+ PM+ D N+ YTL
Sbjct: 197 TTRAAIETLPPEITLSFAPYAEGLQGWIDLARSHGHEVLLEAPMEPVDYPANDPGPYTLI 256
Query: 246 VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS 305
+ + +L + + R TGYFG+ NY G+ +++ + RGL F DDG +
Sbjct: 257 TANRPEDTVRKLEWLMSRATGYFGLTNYLGSRFVTSDTAMTTFTLALKSRGLAFIDDGQA 316
Query: 306 PRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESI 365
+P AD +DD++ I +LK LE A GQA+G A+ +I
Sbjct: 317 SLRGGP-------IPRASADRIIDDELAAGSIDGQLKMLETGAAGRGQALGSGFAYPVTI 369
Query: 366 EVISQWLQQEHVRDVSVVPLSCLAK 390
+ W R + + P S +AK
Sbjct: 370 TQVRLWAAGLSGRGLQLAPASAMAK 394
>gi|291086413|ref|ZP_06571498.1| YibQ protein [Citrobacter youngae ATCC 29220]
gi|291068178|gb|EFE06287.1| YibQ protein [Citrobacter youngae ATCC 29220]
Length = 247
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
+A G E ++ +PM + E D TL+ + +++ +R ++ + G+
Sbjct: 1 MAMKAHNSGHEVLIHLPMAPLSKQPLEKD--TLRPEMSSEEIERIIRDAVSKVPNAVGLN 58
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ + S+ + + + + L F D + + A + + ++LDD
Sbjct: 59 NHMGSAMTSSLFGMQKVMQALERYDLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDT 118
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ IR + E+AR G AI + ++ V+ Q L D+++V S L
Sbjct: 119 QNEADIRRQFNRAVELARRNGSAIAIGHPHPSTVRVLQQMLYSLPA-DITLVRPSSLLN 176
>gi|332531758|ref|ZP_08407643.1| hypothetical protein PH505_aa00630 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038734|gb|EGI75176.1| hypothetical protein PH505_aa00630 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 208
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 199 TLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLR 258
+ + + + A + +E +L +PMQA + E L + +QL L
Sbjct: 2 SYSILPHTPYSQIFATLASQSNKELLLHVPMQALNGK--ELGPGALTLNMNKEQLQQTLG 59
Query: 259 YSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLN 318
+L GV N+ G+ L ++ + + KR L F D ++ + + A L
Sbjct: 60 TALASLPQVKGVNNHMGSALTQKSQAMKWTMEVLKKRHLYFLDSRTTDLSQAQNAANFLG 119
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVR 378
+ + ++LD+ ++++ +L+ L+++A + AI +A + E+IE + L + +
Sbjct: 120 VANISRQVFLDNITTPEQLQLRLEELKQLAISHSFAIAIAHPYPETIEFLRHALPELTKQ 179
Query: 379 DVSVVPLSCLAKLS 392
+VP+S L +
Sbjct: 180 GFELVPVSQLVERK 193
>gi|157149233|ref|YP_001456552.1| hypothetical protein CKO_05073 [Citrobacter koseri ATCC BAA-895]
gi|157086438|gb|ABV16116.1| hypothetical protein CKO_05073 [Citrobacter koseri ATCC BAA-895]
Length = 258
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
+A G E ++ +PM + E D TL+ + ++ +R ++ + G+
Sbjct: 1 MATKAHNSGHEVLIHLPMAPLSKQPLEKD--TLRPEMSSDEIERIIRDAVNKVPYAVGLN 58
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G+ + S+ + + + + L F D + + A + + ++LDD
Sbjct: 59 NHMGSAMTSSLFGMQKVMQALERYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDT 118
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ IR + E+AR G AI + ++ V+ Q + D+++V S L
Sbjct: 119 QNEADIRRQFNRAIELARRNGSAIAIGHPHPSTVRVLQQMVYNLPA-DITLVRPSSLLN 176
>gi|322514546|ref|ZP_08067579.1| divergent polysaccharide deacetylase [Actinobacillus ureae ATCC
25976]
gi|322119485|gb|EFX91572.1| divergent polysaccharide deacetylase [Actinobacillus ureae ATCC
25976]
Length = 282
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A ++AIV+ +G AI LP +++A K+A ++ ++
Sbjct: 22 ITPLAHAGKLAIVIDDIGYRMKK-DNAIYALPKEVSVAIIPVAPYATARAKKAYEQKRDV 80
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ ++ +S L + + ++ ++ + + G+ N+ G+ +++
Sbjct: 81 LIHLPMQPKNKQ-QPIESGALMIGASEVKVAQLIQAARNQVPYAIGLNNHMGSGATADRT 139
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + K A++ L F D + P ++ +A + + + +L+LDD ++ +
Sbjct: 140 TMSHLMKVMAQQQLFFLDSKTGP-SVAAKVAREYGVKALERNLFLDDSDALSDVQRQFNA 198
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E AR G AI + S+ V+ Q + +D+ +V + L +
Sbjct: 199 AIEYARKHGSAILIGHPRKNSVAVLEQGIANLP-QDIQLVSMGSLWR 244
>gi|197103709|ref|YP_002129086.1| hypothetical protein PHZ_c0243 [Phenylobacterium zucineum HLK1]
gi|196477129|gb|ACG76657.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 379
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/322 (24%), Positives = 132/322 (40%), Gaps = 17/322 (5%)
Query: 74 PLNIEDKQSPSKRDNNTVCNQLKNDS-SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIE 132
P + P++ + ++ + + +
Sbjct: 72 PPGWREALRPAQGPLVVQPDVVRLSERPLAPLAATGWNAPA------APPVRALAGGALP 125
Query: 133 ERLILGLSKKELLAKNKVGREDTEVPA--MDKNFCSNASGARIAIVVSGLGISQTGTQRA 190
I G + +D PA + F SN +I +VV GLG++ T++A
Sbjct: 126 AAPIAGFFAPGPGGPLPIIAQDGRTPAEVYARPFTSNGR-PKIGLVVGGLGLNARATRQA 184
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
I L ITL+F L W+ A+ G E +L+ P++ D N+ YTL +
Sbjct: 185 IETLRPEITLSFVVYAEGLQGWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMTDASP 244
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+ +L + L R +GYFG+ NY G+ L++ + E + RGL F DDG++ R
Sbjct: 245 PETAKKLEWILSRASGYFGLTNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAAR--- 301
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQ 370
N+P A+ +DDQ+ I ++L LE A GQA+G A+ ++E +++
Sbjct: 302 ----RGGNVPRATAERVIDDQLSAGAIDQQLLALEAGALQRGQALGSGFAYPVTLETVAR 357
Query: 371 WLQQEHVRDVSVVPLSCLAKLS 392
W + R + P S L
Sbjct: 358 WANEVEQRGYQLAPASALMARR 379
>gi|254447505|ref|ZP_05060971.1| polysaccharide deacetylase family protein [gamma proteobacterium
HTCC5015]
gi|198262848|gb|EDY87127.1| polysaccharide deacetylase family protein [gamma proteobacterium
HTCC5015]
Length = 270
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
AI++ +G + T + R I +P +T A + +R + +E +L +PMQ
Sbjct: 29 AIIIDDIGYN-TVSARRIAAMPWPLTCAVLPEAVASERAAQILADADKELMLHLPMQGRL 87
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
E + L + + L R G+ N++G++L + ++ + E +
Sbjct: 88 GEARE--PHVLNINMDRHHFRQEVLRQLDRFPRVVGINNHQGSVLTTRQQPMNWLMDELS 145
Query: 294 K-RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
D ++ +L + A LP D++LD Q + I ++ +A+ +G
Sbjct: 146 TIENFYVVDSRTASDSLLQASAQHYQLPNSTRDVFLDHQRNEAYIARQVLEFVRVAKASG 205
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AI + + E++ V+ + L V ++P+S L +
Sbjct: 206 SAIAIGHPYPETLNVLEKALPYFESEGVRLLPVSQLIR 243
>gi|329847637|ref|ZP_08262665.1| divergent polysaccharide deacetylase family protein [Asticcacaulis
biprosthecum C19]
gi|328842700|gb|EGF92269.1| divergent polysaccharide deacetylase family protein [Asticcacaulis
biprosthecum C19]
Length = 405
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 87/374 (23%), Positives = 147/374 (39%), Gaps = 32/374 (8%)
Query: 37 IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQ-- 94
+ S +IL+ AF+ + S + + +P K P +
Sbjct: 43 LTAGSAFILVVIAFLNLAGDPDAASQ-----SVRIKMPKTTAAKAPPPRSGAGEAAEGET 97
Query: 95 -------LKNDSSQHDGQIQNDIS---GKTVVNKP--TRSTSIDSLPTIEERLILGLSKK 142
L D+ + G V+ P +T+ ++ P +
Sbjct: 98 FTLDSLGLFGDTPVEGFNLDPAAEAEPGHAVITLPGDETATAAEAGPRAARIPLAQSPIA 157
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNAS------GARIAIVVSGLGISQTGTQRAINLLPA 196
L+ G PA + A +A++V GLG++ T T++AI+ LP
Sbjct: 158 GLVQTTNSGPLPMISPAGLTPASAYARPFRSDGRPYVALIVGGLGLNPTATRQAIDQLPP 217
Query: 197 NITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNR 256
+TL+F L W+ A+ G E I+++PMQ + + TL +L N+
Sbjct: 218 EVTLSFVPYTQGLQGWIDLARASGHEVIVEVPMQPTNYPDTDPGPQTLMANAKSDELQNK 277
Query: 257 LRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPK 316
L +SL R TG+F V NY+G+ L +K A+ RG+ F DDG +
Sbjct: 278 LAWSLSRATGFFAVSNYQGSAFLKDKAGAQTFMSVLKSRGVAFIDDGQARGLQGAWS--- 334
Query: 317 LNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEH 376
AD +D Q++ I+ +L GLE A+ G A+G + ++ V +W Q
Sbjct: 335 ----RASADRVIDSQINAQAIQAQLIGLETTAKNRGSALGTGFGYPVTLAVALRWTQSLE 390
Query: 377 VRDVSVVPLSCLAK 390
+ + + P S L
Sbjct: 391 AKGIQLAPASALLH 404
>gi|303252828|ref|ZP_07338987.1| hypothetical protein APP2_1780 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648258|gb|EFL78455.1| hypothetical protein APP2_1780 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 264
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A ++AIV+ +G +T AI LP +++A ++A ++ ++
Sbjct: 4 ISPLAQAGKLAIVIDDIGY-RTKEDNAIYALPKEVSVAIIPVAPYATARAQKAYEQKRDV 62
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PMQ + + +S L V + + + ++ + + G+ N+ G+ ++++
Sbjct: 63 LIHLPMQPKN-RHQPIESGALMVGASKENVARLIQAARNQVPYAIGLNNHMGSGATADRQ 121
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ E + E +K+ L F D + P ++ +A +L + + +L+LDD +++ +
Sbjct: 122 TMEHLMTELSKQQLFFLDSKTGP-SVAAKVARELGVNALERNLFLDDNDALHEVQNQFHL 180
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G AI + SIEV+ + L D+ +V + L +
Sbjct: 181 ALHYARKHGSAILIGHPRKNSIEVLEKGLANLP-EDIQLVSMGSLWR 226
>gi|296445175|ref|ZP_06887135.1| protein of unknown function DUF610 YibQ [Methylosinus trichosporium
OB3b]
gi|296257349|gb|EFH04416.1| protein of unknown function DUF610 YibQ [Methylosinus trichosporium
OB3b]
Length = 402
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 106/397 (26%), Positives = 175/397 (44%), Gaps = 17/397 (4%)
Query: 1 MSIDLNHPLR--KKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMI 58
M+ +LN PL + P+R + G L + +++ + +G +
Sbjct: 1 MTDELNQPLGVGGEEPRRAPGRGR-----GALLAVAGTLGAVAVAAALVAPRIGGDGQPF 55
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRD----NNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ I I P + +E N +++ S + +
Sbjct: 56 AVARIETIEPPKIVEAPPVEPVAPAPPPTEAERNAAAIAEMERFSGVKVTRGGGGDAPGA 115
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS--NASGAR 172
+V K S + P ++RL+ S L G + +V A + + A R
Sbjct: 116 LVIKIEESGP-ELAPAPDKRLVEKTSDGLLPRIGADGAKPMDVYARPADLSARLPAGAPR 174
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IA+VV G+G++ + RAI+ LPA +TLA A G +++ A+ +G E +L PM+ +
Sbjct: 175 IALVVGGVGLNARLSDRAIDELPAAVTLALAPYGAAVEATAARARARGHEILLHAPMEPY 234
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
D +TL+ L L + + R TGY GV+N+ GA + + + +
Sbjct: 235 DFPVENPGPHTLRAGSDA---LGDLHWLMSRFTGYVGVVNFLGARFTAEAGALRPVLADI 291
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
A RGLL+ DDG+SPR+L LA L L AD +D + +I +L LE +AR G
Sbjct: 292 AARGLLYIDDGASPRSLAPSLASGLGLASARADAAIDARAKPQEIDAQLTQLEALARRNG 351
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
QAI VA A I +S + + R +++VP+S LA
Sbjct: 352 QAIAVAEALPGVIARLSHFARDLERRGIALVPVSALA 388
>gi|121997999|ref|YP_001002786.1| hypothetical protein Hhal_1209 [Halorhodospira halophila SL1]
gi|121589404|gb|ABM61984.1| protein of unknown function DUF610, YibQ [Halorhodospira halophila
SL1]
Length = 272
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAF 202
LA++ G E P + + + A+++ +G R+I+ L +T++
Sbjct: 19 PALAQDPGGAEWMPFPTPEVDPPAGRPA---ALIIDDIGDDWAAGVRSID-LAEGVTISV 74
Query: 203 ASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLR 262
+ + A ++G E +L +PM+A + + L + +Q+ + +L+
Sbjct: 75 LPHTPHGRSLAERAHERGHEVMLHLPMEAKNG--ADPGPGALFLDMDEEQVRKTIARALK 132
Query: 263 RGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR-GLLFFDDGSSPRNLTRVLAPKLNLPY 321
GV N+ G+++ + + +E A R L F D +S R++ + +A + +
Sbjct: 133 SVPHAAGVNNHMGSLITRHPGHMTWLMEELAAREDLYFIDSRTSARSVAQQMAEEHGVDN 192
Query: 322 MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVS 381
V ++LD + D + I E+ + +A+ AI + + E+++++ + L + R V+
Sbjct: 193 AVRHVFLDPRRDTEVIAEQFERFVTLAQQGDGAIAIGHPYPETLDLLEEELPRLRERGVA 252
Query: 382 VVPLSCLA 389
+VP S L
Sbjct: 253 LVPASELV 260
>gi|302338309|ref|YP_003803515.1| protein of unknown function DUF610 YibQ [Spirochaeta smaragdinae
DSM 11293]
gi|301635494|gb|ADK80921.1| protein of unknown function DUF610 YibQ [Spirochaeta smaragdinae
DSM 11293]
Length = 314
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 61/328 (18%), Positives = 125/328 (38%), Gaps = 20/328 (6%)
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
+ E P T P + + + Q G +
Sbjct: 1 MTEKKRPPKTKPTQLYLLLGVIIVLLLAALLLFP---GKTGSRKQELSEG-----RDDSP 52
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGI 182
+ ++ P E + + E L P + + S +AI++ +G
Sbjct: 53 SQQEAPPDSETAPVAVQNPAEDL--------KGGKPLPGQKVPAKPSRGELAIIIDDVGY 104
Query: 183 SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
S R + P IT A +KE + G+EAIL PM+A N+
Sbjct: 105 SLK-ELRPLLAFPGPITFAILPGVTYSKEALKEILQAGKEAILHQPMEAIGG--NDPGPG 161
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
+ + +L +L+ G G+ N+ G+ + S+ EV+ ++ ++ L+F D
Sbjct: 162 AIYTWMDTAAVREQLDKNLKELRGVKGINNHMGSKVTSDPRVMEVVLEDLKEKNLMFIDS 221
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
++ ++R +A +L++PY ++LD+ +R++I + + + A G+AI + +
Sbjct: 222 RTTAETVSRGIAQRLHIPYQERSVFLDNTQEREEILQAFQEGLQKAEKNGRAIMIGHVWC 281
Query: 363 ESI-EVISQWLQQEHVRDVSVVPLSCLA 389
+ E++ + Q + +S L
Sbjct: 282 HELAEILLEVYPQALEEGFEFLSVSDLI 309
>gi|114799786|ref|YP_761883.1| hypothetical protein HNE_3208 [Hyphomonas neptunium ATCC 15444]
gi|114739960|gb|ABI78085.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 429
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 1/285 (0%)
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
I+G+ V + P L+ +K + F ++
Sbjct: 121 INGRLVQPGQSFGEVASGTPAGAGEAGAQLTLNTAEQVSK-PASKAPADIYARPFSNSGG 179
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+++V+ GLGI+ T T+ AI+ LPA++TL+FA + LD W+K A++ G E ++++PM
Sbjct: 180 QPVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPDAKRLDYWIKTAREDGHEVLIEVPM 239
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+AF+ TL + L +L L R +GY+GV+NY+GA ++ S IF
Sbjct: 240 EAFEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRASGYYGVINYQGAKFGADAGSIAPIF 299
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
A+RGL F DDGS + +A L + A +D + I + LE IAR
Sbjct: 300 DVLAERGLAFVDDGSVHKAFFGQVADTKGLRFARAAGPIDTRQSPQDIAAEFMELETIAR 359
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
G AIG AF +IE S W+ + + + P+S L ++P
Sbjct: 360 QHGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPVSFLVPDAAP 404
>gi|312898727|ref|ZP_07758116.1| divergent polysaccharide deacetylase [Megasphaera micronuciformis
F0359]
gi|310620158|gb|EFQ03729.1| divergent polysaccharide deacetylase [Megasphaera micronuciformis
F0359]
Length = 425
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 116/313 (37%), Gaps = 13/313 (4%)
Query: 87 DNNTVCNQLKNDSSQHDGQIQNDI--SGKTVVNKPTR-STSIDSLPTIEERLILGLSKKE 143
D + +L+ + D+ +G TV S+D L L + K
Sbjct: 116 DKEKLTKELEKSDGKAVLYRTEDVKKNGDTVTEYDIALCESVDGDTVSMVALKLYVPPKG 175
Query: 144 ----LLAKNKV---GREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPA 196
L + KV D E + + AR+A+V+ G + N LP
Sbjct: 176 KAAALAKELKVDKNSPSDGESGEDGRIRHPSQIKARLAVVIDDCGSNME-VLEGYNALPI 234
Query: 197 NITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNR 256
++T A + + G + I+ +PM+ + + + ++++
Sbjct: 235 HLTYAVMPFKSHTIDSAESGHNAGNKIIVHLPMEPLNT--VSSEEIFISSDMGDKKVIAT 292
Query: 257 LRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPK 316
+ + G+ N++G+ ++ + + RGL+F D ++ ++ A
Sbjct: 293 TNELIDQVPYAVGINNHQGSKSTADTRLMKDVMSVLKSRGLVFLDSRTTAASVAEQTAAS 352
Query: 317 LNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEH 376
+ + +L++D+ I+E+++ +A G A+ + +++ + + ++
Sbjct: 353 MGVGTTRNNLFIDNDPSVSAIKERIRQAGRLALKNGTAVTIGHCRPATLQALKETYKELL 412
Query: 377 VRDVSVVPLSCLA 389
+ V ++ +
Sbjct: 413 DEGIDFVFVTQVM 425
>gi|258645566|ref|ZP_05733035.1| polysaccharide deacetylase [Dialister invisus DSM 15470]
gi|260402924|gb|EEW96471.1| polysaccharide deacetylase [Dialister invisus DSM 15470]
Length = 375
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 58/303 (19%), Positives = 115/303 (37%), Gaps = 13/303 (4%)
Query: 96 KNDSSQHDGQIQNDI-SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED 154
++ + G+++ ++++ + L+K+E KN
Sbjct: 77 RDGKGKSGGRVEEVKKEPQSIIKEFMNRLKGGENKGNNGDGNNILTKRE--EKNPSDTRL 134
Query: 155 TEVPAMDKNFCSNASGA-------RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGN 207
A + +G R+A+V+ G+ +QR + +TLA N
Sbjct: 135 KASAAKQREPAEKKAGGNSSSVTGRLAVVIDDAGLDLE-SQRIYEEIGVPLTLAVMPNKM 193
Query: 208 SLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
E + G IL PM+ S E+ T+ + + + + L+ SL +
Sbjct: 194 YTSEAAAEWSRYGMPVILHQPMEPVSGSGMEE--KTILTSMSDEAIRYMLKESLEQIPQA 251
Query: 268 FGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
G+ N++G+ ++ V+ E + RGL FFD ++ A +PY DL+
Sbjct: 252 VGINNHQGSRATTDARVMRVVMNELSHRGLFFFDSRTNTTTAADSAAASYGVPYARNDLF 311
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+D+ D +IR ++ A+ G I + + V + Q + + V +S
Sbjct: 312 VDNSADEGEIRAMIQEGANRAKARGSYIIIGHCRPHTAAVFRDIVPQLQAQGIEFVYVSS 371
Query: 388 LAK 390
L +
Sbjct: 372 LLR 374
>gi|114569952|ref|YP_756632.1| hypothetical protein Mmar10_1402 [Maricaulis maris MCS10]
gi|114340414|gb|ABI65694.1| protein of unknown function DUF610, YibQ [Maricaulis maris MCS10]
Length = 350
Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A S + +I +V+ +G+ +R + LP +T+A + A+
Sbjct: 100 APADPQLSAIARPQIVLVIDDVGLDVAAAERVVA-LPIPLTVAILPYAEASAELAALARL 158
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G + +L +PM+ + L++ + L R+R+ + R G G+ N+ G+
Sbjct: 159 NGHDVLLHMPMEPVG--LADPGPNALRIGLSDVDLQTRVRWGMARVPGAIGLNNHMGSRF 216
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++ + V + LF D ++ + R +A L L + D++LD + I
Sbjct: 217 TADPRALRVALSAVSHTNPLFLDSLTTGESRGRAVAAGLGLRALERDIFLDHDRSAEAIE 276
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+L E+AR G A+ + +++ ++ WL+ + + V LA
Sbjct: 277 ARLADAAELARQDGFAVVIGHPHTLTLDTLTAWLESPAAQGIDFVTAGTLA 327
>gi|240949054|ref|ZP_04753405.1| hypothetical protein AM305_09111 [Actinobacillus minor NM305]
gi|240296527|gb|EER47152.1| hypothetical protein AM305_09111 [Actinobacillus minor NM305]
Length = 264
Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 98/223 (43%), Gaps = 4/223 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ +G S QR + LP I++A + + A + ++ ++ +
Sbjct: 7 AQAAKLAIVIDDIGYSVREDQR-VYQLPKEISVAIIPSAPYAKVRAENAFAQKRDILIHL 65
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + + L V + + L + + G+ N+ G+ ++K +
Sbjct: 66 PMQPQNAQQAIEKP-ALLVGDDFAKAQSLLENARQHVPYAIGLNNHMGSGATADKATMRH 124
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ A + L F D + P ++ +A + + + ++LDD + + + + + +
Sbjct: 125 FMQALAAQKLFFLDSKTGP-SVATKVAAEFGINALERHVFLDDSNEYNDVMHQFQQAKAY 183
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AR G AI + SI+V+ + L+ D+ +V + L +
Sbjct: 184 ARKHGVAILIGHPRKNSIDVLEKELKTLPA-DIQLVSMGSLWR 225
>gi|167463615|ref|ZP_02328704.1| hypothetical protein Plarl_13849 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381594|ref|ZP_08055567.1| hypothetical protein PL1_0781 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154430|gb|EFX46733.1| hypothetical protein PL1_0781 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 281
Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 103/259 (39%), Gaps = 9/259 (3%)
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL 194
+ S L + + + + PA+ + R AIV+ G GT+ + L
Sbjct: 24 METAFSTPSLYSAIRRVDDPGQSPALPEPSTQK----RAAIVIDDFGNKMGGTEDMLA-L 78
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLL 254
P IT+A + + A G+E I+ +PM+ + + ++
Sbjct: 79 PFPITVAVMPFLQTTKADAEAAHAAGKEVIIHLPMEPKIARKSWLGPGVISTDLKNDEIR 138
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
R+ ++ G+ N+ G+ ++ +++ + +RGL F D ++ ++ A
Sbjct: 139 KRVHAAIDEVPHAIGINNHMGSKATGDERVMKLVLEVCKERGLFFLDSHTNYWSIACRKA 198
Query: 315 PKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD---ESIEVISQW 371
++ +P + L+LDD + I ++++ L++ + + + + V+ +
Sbjct: 199 KEVGVPCIENHLFLDDIHTKKHISQQVRLLDKHLKEHSTCVTIGHVGRYGSLTAAVLREQ 258
Query: 372 LQQE-HVRDVSVVPLSCLA 389
+ + +V +S L
Sbjct: 259 IPALTEKSGIRIVRISELV 277
>gi|330900944|gb|EGH32363.1| hypothetical protein PSYJA_26750 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 199
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
Query: 203 ASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLR 262
+ + ++A + G+ +L +PM Y + +L +RL +L
Sbjct: 1 MPDTPHATEFARQAHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALL 54
Query: 263 RGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYM 322
+ G+ N+ G+ + + + + E +R L F D +S + + A ++ L +
Sbjct: 55 KVPYAAGINNHMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASV 114
Query: 323 VADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
D++LDD+ + I +L+ +IAR G A+ + + +++V+ + L + V
Sbjct: 115 SRDVFLDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEW 174
Query: 383 VPLSCLA 389
+ L +
Sbjct: 175 IDLRSMI 181
>gi|152990904|ref|YP_001356626.1| hypothetical protein NIS_1160 [Nitratiruptor sp. SB155-2]
gi|151422765|dbj|BAF70269.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 334
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 120/297 (40%), Gaps = 11/297 (3%)
Query: 94 QLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRE 153
+ ++ +++ +P R T + + ++ LS+ E +N +
Sbjct: 49 GYEQAKEKYTKRVEQTKIKTLQKKRPKRKTVRN----VAKKHQAVLSEIEDYKRNSERMK 104
Query: 154 DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
+ + + ++AI++ + + I L I +F +
Sbjct: 105 EPSILQQKHEKAIDTDKPKLAIIIDDVAYGYQA--KTIKNLGIPINPSFFPPSPRHPKTP 162
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
+ A ++ +PM+A + E D TL++T ++Q + + + + N+
Sbjct: 163 QYAAMFSH-YMIHLPMEANHYLHEEPD--TLRITSSLQTIERVIAKIRKEFPKAKVINNH 219
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ ++ E+ + ++K K +F D ++ + + L +L PY+ +++LD++ +
Sbjct: 220 TGSRFTADYEAMKRLYKVLDKYHFVFLDSRTTAQTVVPKLDKELGRPYLARNVFLDNEQN 279
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
I+ +L+ +A+ G AI + +++ + + + V ++ + L K
Sbjct: 280 VAYIKNQLRQAVALAKKRGVAIAIGHPHPATLKALRKSKDILNQ--VQLIYVDSLLK 334
>gi|268679505|ref|YP_003303936.1| hypothetical protein Sdel_0870 [Sulfurospirillum deleyianum DSM
6946]
gi|268617536|gb|ACZ11901.1| protein of unknown function DUF610 YibQ [Sulfurospirillum
deleyianum DSM 6946]
Length = 381
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 64/374 (17%), Positives = 142/374 (37%), Gaps = 12/374 (3%)
Query: 16 RKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPL 75
+KS S +GL L F +G+ Y ++H+ + +E + + L
Sbjct: 19 KKSKISFKPFLIGLALCFIALGIGIGGYWYVNHSLPFLKHQKAVP--TKEESVSTDALML 76
Query: 76 NIEDKQSPSKRDNNTVCNQLKNDSSQHDGQ-IQNDISGKTVVNKPTRSTSIDSLPTIEER 134
++ K T+ L + +++ I V + T+ ++ +++
Sbjct: 77 KMQQMLESEKLRQATLP-PLPETNVSKPAPLVESAIVPSKVEENSSLETTQNNEALVQKA 135
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL 194
L E K + + + + + ++AI++ + S R + +
Sbjct: 136 PELS-EVHEYQQSLKESKSSHKPHTVVRKEYPQGTTPKLAIIIDDV--SFPWQTRLMKEI 192
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLL 254
P +T AF ++ + + A++ +P++A S E+D TL T ++ +
Sbjct: 193 PYKVTPAFFPPTKGHPETVRLSHEFPF-AMVHLPLEAKYYSRPEED--TLNTTDSLDVIE 249
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
R++ N+ G ++ + + + K L F D + + +
Sbjct: 250 KRIKRIKAWFPHIHYYNNHTGGYFTADYAAMDRLIKVMKDHNLSFVDSRTVGNSKAPEVM 309
Query: 315 PKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQ 374
K + D++LD+ +++ IR++LK A+ G AI + ++EV+ Q
Sbjct: 310 KKYGMFLYSRDVFLDNSLEKSAIRKQLKEAVFKAKKYGYAIAIGHPHKNTLEVLRD--SQ 367
Query: 375 EHVRDVSVVPLSCL 388
+ V +V L L
Sbjct: 368 VLLEGVEMVYLKEL 381
>gi|289523286|ref|ZP_06440140.1| polysaccharide deacetylase family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502978|gb|EFD24142.1| polysaccharide deacetylase family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 315
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 142 KELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA 201
L + + + TE P+ K+ GA +AIVV LG S + + L +T A
Sbjct: 67 GRLSEREEEKQALTEEPSKAKSL----KGAYLAIVVDDLGFSYARAEE-LAGLKIPLTWA 121
Query: 202 FASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSL 261
S + A+ KG ++ +PM+AF NE + + ++ + + +R +L
Sbjct: 122 IIPFQRSSKATAELARNKGIPFLVHVPMEAFG--DNESQMHLVALSMDDETIRRNVREAL 179
Query: 262 RRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY 321
G GV N+RG+ S+ + + +E + ++F D ++ ++ + A K +
Sbjct: 180 ESLPGAIGVNNHRGSAATSDMRAMRALMEELRQDNMIFLDSRTAASSVAAIEARKAGIFA 239
Query: 322 MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVS 381
+ ++D D + +L+ A+ G A+ + A ++ ++Q L V
Sbjct: 240 LENGAFIDHLEDIKFMWSQLERAAGQAQRRGYAVAICHARPVTLTFLNQ-LDSNPDIGVK 298
Query: 382 VVPLSCLAKLSSPS 395
+V + L ++ S S
Sbjct: 299 LVTVDELVRILSQS 312
>gi|46580740|ref|YP_011548.1| hypothetical protein DVU2335 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450160|gb|AAS96808.1| conserved domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234454|gb|ADP87308.1| protein of unknown function DUF610 YibQ [Desulfovibrio vulgaris
RCH1]
Length = 516
Score = 219 bits (557), Expect = 9e-55, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 89/227 (39%), Gaps = 2/227 (0%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ GA +AIV+ +G S G R + L +T A + + A + G+E
Sbjct: 284 RPGTPVEGALLAIVIDDIGESM-GAVRDLLKLDYPVTFAVWPRSSHAREAAEAAHRAGRE 342
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ PM+ + + V ++ LR +L R G+ N+ G+ +
Sbjct: 343 VMIHQPMEPLKYPSVKPGPGAIYVRMGSDEIEATLRDNLARVPHAVGLNNHMGSRFTQDT 402
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ +GL D + ++ A K LP +++LD D+ I +L
Sbjct: 403 RGVRAVCDALEGKGLFVLDSVTHSGSVFYREARKAGLPAGKRNVFLDVIHDKRNIMFQLD 462
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+A G A+ + E++ + +W Q+ + V +V + L
Sbjct: 463 KAARVAHEQGVAVAIGHPLAETVAALKEW-QRTRDKSVRIVTMRQLL 508
>gi|315633408|ref|ZP_07888699.1| exported polysaccharide deacetylase [Aggregatibacter segnis ATCC
33393]
gi|315477908|gb|EFU68649.1| exported polysaccharide deacetylase [Aggregatibacter segnis ATCC
33393]
Length = 275
Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A A++AIV+ LG I +P +++A + ++A ++G++ ++ +
Sbjct: 21 AYSAKLAIVIDDLGY-HAKEDAQILAMPKAVSVAIIPAAPYAKQRNQQAFQQGRDILIHM 79
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM+ + ED L + + ++ +R++ + + G+ N+ G+ ++
Sbjct: 80 PMETQSKMKIEDGG--LHLGMSQGEVNHRVQTAHNIVSNAIGMNNHMGSAATADGPLMTK 137
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ +R L F D + R++ +A + + + ++LDD ++ + + +
Sbjct: 138 LMTALRERHLSFLDSRTIGRSVAGKMAKEQGVRTLDRHIFLDDSDAFADVQRQFQAAVQY 197
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ G AI + +I V+ + DV +V + L +
Sbjct: 198 AQKHGIAIAIGHPRKNTIAVLQAGIANLPA-DVQLVSMGSLWR 239
>gi|302343200|ref|YP_003807729.1| hypothetical protein Deba_1768 [Desulfarculus baarsii DSM 2075]
gi|301639813|gb|ADK85135.1| protein of unknown function DUF610 YibQ [Desulfarculus baarsii DSM
2075]
Length = 360
Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats.
Identities = 60/348 (17%), Positives = 121/348 (34%), Gaps = 11/348 (3%)
Query: 44 ILISHAFVGTISEMIPYSVIRE--IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQ 101
I A + + + + +++ +
Sbjct: 21 IAFEEAPRRQGGDRAAERLTDAMLAGLARGGLDPARVGLSMAGEPWGQVAQMKVELAPGE 80
Query: 102 HDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
G+I++ + R I E + G L+ + + P
Sbjct: 81 DAGKIRSAVESALAGLSAPRRWRQRGRAWIMELSLAGRPSHRLIITAQAAPDGPAPPPDR 140
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ + AIV+ +G G + + L ++T + + + AK +G+
Sbjct: 141 REALA-------AIVIDDMGY-LLGPAKELLELDLDLTFSILPFSPHGRQVARMAKARGR 192
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
+ +L +PM+ L V Q L + L GV N+ G+ +
Sbjct: 193 QVLLHLPMEPKSFPRLSPGPGALLVEADEQALARQTAADLDFLPEAVGVNNHMGSRFTED 252
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + +RGL F D +SPR+ +A +L L D++LD +VD IR ++
Sbjct: 253 ATALRPVMTQIGRRGLFFVDSLTSPRSAAYDVAGQLGLRRARRDMFLDHEVDEQAIRRQI 312
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+GL +AR I + +I+ + + ++ V + P+S L
Sbjct: 313 EGLIHLARGGHPVIAIGHPHQATIKALRHYQERLRQE-VRLRPVSELL 359
>gi|78777856|ref|YP_394171.1| hypothetical protein Suden_1659 [Sulfurimonas denitrificans DSM
1251]
gi|78498396|gb|ABB44936.1| Protein of unknown function DUF610, YibQ [Sulfurimonas
denitrificans DSM 1251]
Length = 364
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 70/377 (18%), Positives = 151/377 (40%), Gaps = 23/377 (6%)
Query: 10 RKKTPKRKS-FYSQIISRLG-LFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIA 67
+K +PK+ S F S + L + ++ +F+ G I H + + +E
Sbjct: 5 KKASPKKSSNFLSYTVWSLAFVAIVLSSFVAGY----YIGHDSAKD--DALKKEQSKEKT 58
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
+ L E + S D +V ++LK + + NK S S
Sbjct: 59 KQSMIKKLEQESIKKKSLEDEQSVSDRLKEVLKKEPAVAETLKDSNE-SNKSNDSNVTSS 117
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTEVP-AMDKNFCSNASGARIAIVVSGLGISQTG 186
LP E E+ +P A+++ + ++AI++ + S
Sbjct: 118 LPIKEVVSEY--------ENASHEIEEAVLPKAVERKIVKSLKRPKLAIIIDDV--SVKS 167
Query: 187 TQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKV 246
AI L IT++F + A ++ ++ +PM+A E TL+V
Sbjct: 168 HVNAIKGLHLPITMSFLPPSKARPSSHILASQESF-YMVHLPMEAQSFKSEE--PLTLRV 224
Query: 247 TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP 306
+ ++++ R+ + + N+ G+ +++ + + + K ++F D ++
Sbjct: 225 DDSNEKIVQRVVEIKKLFPKVKYINNHTGSKFTADEAAMDRLISALKKSDIIFVDSRTTG 284
Query: 307 RNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
+ + ++ K L Y+ D++LD ++D+ I ++K E+A+ G AI + +I
Sbjct: 285 ESKAQKISKKYALEYIGRDVFLDHKMDKAYILSQIKKAIEVAKKHGSAIAIGHPHANTIA 344
Query: 367 VISQWLQQEHVRDVSVV 383
I++ + D+ +V
Sbjct: 345 AINESKKLFADVDLVLV 361
>gi|120601972|ref|YP_966372.1| hypothetical protein Dvul_0924 [Desulfovibrio vulgaris DP4]
gi|120562201|gb|ABM27945.1| protein of unknown function DUF610, YibQ [Desulfovibrio vulgaris
DP4]
Length = 461
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 45/227 (19%), Positives = 90/227 (39%), Gaps = 2/227 (0%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ GA +AIV+ +G S G R + L +T A + + A + G+E
Sbjct: 229 RPGTPVEGALLAIVIDDIGESM-GAVRDLLKLDYPVTFAVWPRSSHAREAAEAAHRAGRE 287
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ PM+ + + V ++ LR +L R G+ N+ G+ +
Sbjct: 288 VMIHQPMEPLKYPSVKPGPGAIYVRMGRDEIEATLRDNLARVPHAVGLNNHMGSRFTQDV 347
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + +GL D + ++ A + LP +++LD D+ I +L
Sbjct: 348 RGVRAVCEALEGKGLFVLDSVTHSGSVFYREARRAGLPAGKRNVFLDVIHDKRNIMFQLD 407
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+A G A+ + E++ + +W Q+ + V +V + L
Sbjct: 408 KAARVAHEQGVAVAIGHPLAETVAALKEW-QRTRDKSVRIVTMRQLL 453
>gi|15614055|ref|NP_242358.1| hypothetical protein BH1492 [Bacillus halodurans C-125]
gi|10174109|dbj|BAB05211.1| BH1492 [Bacillus halodurans C-125]
Length = 273
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 7/227 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R AI++ G G + +T+A + + A+ G E I+ +P++
Sbjct: 33 RAAIIIDDFGGDVKGVDDFLTGE-IPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEP 91
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + +V ++ +R+R + G+ N+ G+ ++ N++ I +
Sbjct: 92 KKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEV 151
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV-DRDKIREKLKGLEEIART 350
++ D G+SP +L LA +L +PY ++LD+ R ++ + ++ L + A+
Sbjct: 152 VKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQ 211
Query: 351 TGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+ IG+ DE+ I L + + +VP+S L L SP
Sbjct: 212 GSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQL--LPSP 256
>gi|315185549|gb|EFU19318.1| protein of unknown function DUF610 YibQ [Spirochaeta thermophila
DSM 6578]
Length = 311
Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 4/209 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+++ G S ++ LP +T++ + ++ G+ L +PM+ E
Sbjct: 96 LIIDDAGYSLDQVAPFLS-LPFPLTVSVLPGLPLSKEVALKVQEAGKTLFLHLPMEP--E 152
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
+ L V+ + ++ + L G GV N+ G+ + E I A
Sbjct: 153 GDEDPGPGALYVSMSWNEIEKVIAEDLASVPGVQGVNNHMGSRFTKDPLRMEWILSILAA 212
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
GLLF D ++ ++ R A +L +P M D++LD++ + + +IAR G+A
Sbjct: 213 GGLLFVDSRTTAESVVRETALRLGVPVMERDVFLDNEQTEAYVEQAFMHAVQIARRRGRA 272
Query: 355 IGVAVAFDESIE-VISQWLQQEHVRDVSV 382
+ + + + V+ + + V +
Sbjct: 273 VAIGHVWTRVLPGVLDRMADRARNEGVIL 301
>gi|327482780|gb|AEA86090.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 263
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 90/225 (40%), Gaps = 7/225 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A+ + +++ LG + +R + LP + LA + ++A + G+ +L +
Sbjct: 31 AARPSLTLIIDDLGQNPARDRRVLQ-LPGPVALAILPDTRHAAELAEQAHRAGKTVMLHM 89
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + +L RL +L G+ N+ G+ + ++
Sbjct: 90 PMAPAG------GRFAWHPQLPHDELARRLDAALAAVPHVRGLNNHMGSAMTEQPQAMTW 143
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ E +R L F D +SPR + A + L + D++LDD + E+ + +
Sbjct: 144 LMGELQRRHLFFLDSRTSPRTVAAASAQRTALASLSRDIFLDDDPSPAAVAERFQAAIAL 203
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
AR G + + + ++ ++ + L + + + V + +
Sbjct: 204 ARKQGSVVIIGHPHESTLALLERELPRLPAQGIEWVDVGQMIATR 248
>gi|119505488|ref|ZP_01627560.1| hypothetical protein MGP2080_04180 [marine gamma proteobacterium
HTCC2080]
gi|119458597|gb|EAW39700.1| hypothetical protein MGP2080_04180 [marine gamma proteobacterium
HTCC2080]
Length = 255
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
C + +A+++ LG + T + +PA +T++ K+G+E
Sbjct: 17 ATCPLHNHGNLAVIIDDLGYNLD-TAQVAAAIPAPLTMSIIPGTPYALEVADLGAKRGKE 75
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+L +PM A + D L V + R++ +L+ G G+ N+ G+ L +N+
Sbjct: 76 VMLHMPMAAVRTRVS--DPLVLDGQLPVADIGQRVQQALQSVPGAAGMNNHMGSALTTNR 133
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
E+ + + E A + + F D ++ + R A +P ++LD++ + + ++K
Sbjct: 134 EAMDALMSELAAQDMFFIDSRTTAETVARDAAKARGVPSASRTVFLDNKPELAAVEIQIK 193
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A G AI + ++ +S+ L + DV+VV S +A+
Sbjct: 194 EAVRRALVEGYAIAIGHPHPATLTALSRALPRLPA-DVTVVSASQIAR 240
>gi|146284395|ref|YP_001174548.1| hypothetical protein PST_4083 [Pseudomonas stutzeri A1501]
gi|145572600|gb|ABP81706.1| putative exported protein [Pseudomonas stutzeri A1501]
Length = 263
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 89/225 (39%), Gaps = 7/225 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
A+ + +++ LG + +R + LP + LA ++A + G+ +L +
Sbjct: 31 AARPSLTLIIDDLGQNPARDRRVLQ-LPGPVALAILPGTRHAAELAEQAHRAGKTVMLHM 89
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PM + +L RL +L G+ N+ G+ + ++
Sbjct: 90 PMAPAG------GRFAWHPQLPHDELARRLDAALAAVPHVRGLNNHMGSAMTEQPQAMTW 143
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ E +R L F D +SPR + A + L + D++LDD + E+ + +
Sbjct: 144 LMGELQRRHLFFLDSRTSPRTVAAASAQRTALASLSRDIFLDDDPSPAAVAERFQAAIAL 203
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
AR G + + + ++ ++ + L + + + V + +
Sbjct: 204 ARKQGSVVIIGHPHESTLALLERELPRLTAQGIEWVDVGQMIATR 248
>gi|315635656|ref|ZP_07890919.1| divergent polysaccharide deacetylase superfamily protein
[Arcobacter butzleri JV22]
gi|315479953|gb|EFU70623.1| divergent polysaccharide deacetylase superfamily protein
[Arcobacter butzleri JV22]
Length = 359
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 131 IEERLILGLSKKELLAKNKVGRE------DTEVPAMDKNFCSNAS-GARIAIVVSGLGIS 183
+E+ + +KKE ++G E + P + N +IAI++ +
Sbjct: 98 LEKVKEIKNNKKEYEQTTEIGEENIPLVEEKAAPIKKDTYVYNKKDKPKIAIIIDDVVSD 157
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
++ I+ + IT+AF N+ K A+ ++ P+QA ++ ++ T
Sbjct: 158 SQKSK--ISNIGYPITMAFLPPTNTHKDSAKIAQNVPF-YMIHFPLQA-SSAFKGEEINT 213
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
LK+T + + + NR++ N+ G++ N E+ + +FK K +F D
Sbjct: 214 LKITDSYETIENRVKQLRSWYPNAKYTNNHTGSVFTENDEAMDKLFKALVKYNFIFVDSK 273
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDE 363
+S +++ + A K NLPY+ +++LD++ + I+ +L E+A+ G A+ + +D
Sbjct: 274 TSAKSVGQKYANKYNLPYISRNIFLDNEKSYEYIKSQLIKTVELAKKHGYAVAIGHPYDI 333
Query: 364 SIEVISQ 370
+++V+ +
Sbjct: 334 TLKVLKE 340
>gi|157736497|ref|YP_001489180.1| hypothetical protein Abu_0236 [Arcobacter butzleri RM4018]
gi|157698351|gb|ABV66511.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 359
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 131 IEERLILGLSKKELLAKNKVGRE------DTEVPAMDKNFCSNAS-GARIAIVVSGLGIS 183
+E+ + +KKE ++G E + P + N +IAI++ +
Sbjct: 98 LEKVKEIKDNKKEYEQTTEIGEENIPLVEEKAAPIKKDTYVYNKKDKPKIAIIIDDVVSD 157
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
++ I+ + IT+AF N+ K A+ ++ P+QA ++ ++ T
Sbjct: 158 SQKSK--ISNIGYPITMAFLPPTNTHKDSAKIAQNVPF-YMIHFPLQA-SSAFKGEEINT 213
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
LK+T + + + NR++ N+ G++ N E+ + +FK K +F D
Sbjct: 214 LKITDSYETIENRVKQLRNWYPNAKYTNNHTGSVFTENDEAMDKLFKALVKYNFIFVDSK 273
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDE 363
+S +++ + A K NLPY+ +++LD++ + I+ +L E+A+ G A+ + +D
Sbjct: 274 TSAKSVGQKYANKYNLPYISRNIFLDNEKSYEYIKAQLIKTVELAKKHGYAVAIGHPYDI 333
Query: 364 SIEVISQ 370
+++V+ +
Sbjct: 334 TLKVLKE 340
>gi|119390469|pdb|2NLY|A Chain A, Crystal Structure Of Protein Bh1492 From Bacillus
Halodurans, Pfam Duf610
Length = 245
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 7/227 (3%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R AI++ G G + +T+A + + A+ G E I+ +P++
Sbjct: 5 RAAIIIDDFGGDVKGVDDFLTGE-IPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEP 63
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
+ + +V ++ +R+R + G+ N+ G+ ++ N++ I +
Sbjct: 64 KKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEV 123
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV-DRDKIREKLKGLEEIART 350
++ D G+SP +L LA +L +PY ++LD+ R ++ + ++ L + A+
Sbjct: 124 VKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQ 183
Query: 351 TGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
+ IG+ DE+ I L + + +VP+S L L SP
Sbjct: 184 GSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQL--LPSP 228
>gi|212632982|ref|YP_002309507.1| hypothetical protein swp_0073 [Shewanella piezotolerans WP3]
gi|212554466|gb|ACJ26920.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 247
Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 87/211 (41%), Gaps = 4/211 (1%)
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
G Q+ +A+ LP ++TL+ +A ++G E ++ +PMQA +
Sbjct: 28 GYRQS--DKAVLALPPSVTLSVLPLTPLGKAVATKAHQQGSEILVHLPMQALNGKTI--G 83
Query: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
L + Q +L ++ G N+ G++L + + +R + F
Sbjct: 84 PGALTNAMSEQDFKLQLEQAIDSVPFASGANNHMGSLLTQLDKPMHWVMDTLLQRDIYFI 143
Query: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA 360
D ++ +A + +P + ++LD+ + + + + +T + +A
Sbjct: 144 DSVTTKFTQAGAVAESVGVPLLKRTIFLDNDKTDAGLELQFQKAIALTKTQTDVVVIAHP 203
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
+ E++ ++ L + ++++VP S L +
Sbjct: 204 YPETLTFLNNNLHRLAQANIALVPPSKLLPI 234
>gi|149193944|ref|ZP_01871042.1| hypothetical protein CMTB2_02628 [Caminibacter mediatlanticus TB-2]
gi|149135897|gb|EDM24375.1| hypothetical protein CMTB2_02628 [Caminibacter mediatlanticus TB-2]
Length = 332
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 107/240 (44%), Gaps = 10/240 (4%)
Query: 154 DTEVPAMDKNFCS---NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
+ +P K + ++ I++ + S I +P IT +F N
Sbjct: 99 EKIIPPTIKTEPKKIKHNHKPKLVIIIDDV--SFKYQTNLIKQIPYKITPSFFPPTNRHP 156
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
+ AK ++ +P++A + + T+ ++ T Q++ NR+ Y + +
Sbjct: 157 NTIYLAKSFSH-YMVHLPLEAKNYHK--PEPNTITISSTYQEIYNRIVYLKKIFPKAKFM 213
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
N+ G+ S+KES + +FK F K L F D +S ++ N+P+ +++LD+
Sbjct: 214 NNHTGSTFTSDKESMKKLFKVFKKENLGFVDSVTSANTKGELVDKIYNIPFYKRNIFLDN 273
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
D++ IR++L +A+ G AI + ++ + ++ +++V VV + L K
Sbjct: 274 IQDKNYIRKQLLKAVMLAKKHGYAIAIGHPHKITLITLKN--SKDILKNVDVVYIDELNK 331
>gi|42528003|ref|NP_973101.1| hypothetical protein TDE2503 [Treponema denticola ATCC 35405]
gi|41819048|gb|AAS13020.1| conserved domain protein [Treponema denticola ATCC 35405]
Length = 390
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 58/362 (16%), Positives = 138/362 (38%), Gaps = 10/362 (2%)
Query: 27 LGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR 86
+ FL C ++ + ++I+ S V E + I + +K +
Sbjct: 34 IAGFLAVCIIMLAVFLFIIPS---VKNKDETTNKTQIAKEQEKIEEEKPKTTEKPPIESK 90
Query: 87 DNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLA 146
+ + K +Q + + + KT+ +KP S E + +
Sbjct: 91 AKDKRTEKTKEAETQASKNLPKEAAKKTLHDKPKESEKAG----RENKAKKPENPIITGK 146
Query: 147 KNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNG 206
+E ++ S ++ V G + Q ++ LP T+A
Sbjct: 147 PKPQEQEPDVSAYPIQDLPELPSKGKLIFVFDDAGHNLEQLQYFLD-LPFPCTIAVLPKL 205
Query: 207 NSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTG 266
+ + + G+E IL PMQA + +K +++ + ++
Sbjct: 206 PNSRETARRIRAAGKELILHQPMQALN-PNINPGDGAVKPGMDREEIKKIVASNVEEIGP 264
Query: 267 YFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADL 326
G+ N+ G+++ S++++ E + + ++ + F D +S +++ +A KLN+ +
Sbjct: 265 IAGMNNHEGSLITSDEKAMEAVLELCREKNIYFLDSRTSSKSVVPQVAKKLNMNIWERAV 324
Query: 327 YLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV-ISQWLQQEHVRDVSVVPL 385
+LD++ D+ +++++ EIA G+AI + F + + + + + +
Sbjct: 325 FLDNKKDKAYMKKQIIEGLEIASQRGEAIMIGHVFTVDLAILLKEMYSDLTQEGYTFSTI 384
Query: 386 SC 387
S
Sbjct: 385 SK 386
>gi|307718431|ref|YP_003873963.1| hypothetical protein STHERM_c07330 [Spirochaeta thermophila DSM
6192]
gi|306532156|gb|ADN01690.1| hypothetical protein STHERM_c07330 [Spirochaeta thermophila DSM
6192]
Length = 271
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 88/209 (42%), Gaps = 4/209 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+++ G S + ++ LP + ++ + ++ G+ L +PM+ E
Sbjct: 56 LIIDDAGYSLEQVEPFLS-LPFPLAVSVLPGLPLSGEVARRVREAGKTLFLHLPMEP--E 112
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
+ L V+ + ++ + + L G GV N+ G+ + E I A
Sbjct: 113 GNEDPGPGALYVSMSRAEIEHVIAEDLASVPGVQGVNNHMGSRFTKDPLRMEWILSILAA 172
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
GLLF D ++P ++ R A +L +P M D++LD++ + + +IAR G+A
Sbjct: 173 GGLLFVDSRTTPESVVRETAFRLGVPVMERDVFLDNEQTAVYVEQAFMHAVQIARRRGRA 232
Query: 355 IGVAVAFDESIE-VISQWLQQEHVRDVSV 382
+ + + + V+ + + V +
Sbjct: 233 VAIGHVWTRVLPGVLGRMADRARDEGVIL 261
>gi|83592567|ref|YP_426319.1| hypothetical protein Rru_A1231 [Rhodospirillum rubrum ATCC 11170]
gi|83575481|gb|ABC22032.1| Protein of unknown function DUF610, YibQ [Rhodospirillum rubrum
ATCC 11170]
Length = 582
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 127/305 (41%), Gaps = 9/305 (2%)
Query: 88 NNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK 147
+ V L + G+T + P++ + L +
Sbjct: 275 PSEVAVALPR--GSSPPLEEGFRPGRTPSYNDLPAPGTFPAPSLGDAPSSDLLRSSEHGL 332
Query: 148 NKVGREDTEVP--AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN 205
V D +P + F +A+ R+AI+VSGLG+ + TQ AI LP ++TLAF
Sbjct: 333 LPVIAADGRMPWRTYARPFTGDATRPRVAIIVSGLGMREAATQAAITRLPPDVTLAFDPY 392
Query: 206 GNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGT 265
+L WM +A++ G E +L++P++ + L + + +RL L R
Sbjct: 393 APALPAWMGKARQSGHETLLELPVEPTGYPAIDPGPLALLSGLSEIENRSRLETVLGRSG 452
Query: 266 GYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS-SPRNLTRVLAPKLNLPYMVA 324
GY GV+ S + RGLL+ GS + N+ AP +N+
Sbjct: 453 GYVGVLATAAGRFTDTPASLRGLLDALKSRGLLYVHRGSPTAVNVNGDAAPPVNIVTAR- 511
Query: 325 DLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVP 384
+DD ++ I +L+ L ++AR G AIGV A ++ +++WL + + P
Sbjct: 512 ---IDDTPNQRAIDARLEYLGQVARAQGYAIGVVGASPVALYRLNRWLGGLEGEGLVLAP 568
Query: 385 LSCLA 389
S +
Sbjct: 569 ASAVM 573
>gi|85858725|ref|YP_460927.1| polysaccharide deacetylase [Syntrophus aciditrophicus SB]
gi|85721816|gb|ABC76759.1| polysaccharide deacetylase [Syntrophus aciditrophicus SB]
Length = 334
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 91/240 (37%), Gaps = 9/240 (3%)
Query: 148 NKVGREDTEVPAMDKNFCSNASGA-------RIAIVVSGLGISQTGTQRAINLLPANITL 200
+ + VP + RIAI++ +G + + + + A I+
Sbjct: 85 TEAPGTEKPVPPPTEKATPTTKAPKERVSGLRIAILIDDIGADLSPVKN-LLKIEAPISF 143
Query: 201 AFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYS 260
A + K G++ +L +PM+ + L T +L L +
Sbjct: 144 AVLPHMPRGAAAADMIHKAGRDVLLHLPMEPRSYPKEKPGPGALLTTMDDSELRKVLTGN 203
Query: 261 LRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP 320
L GV N+ G++ ++E ++ E KRGL F D ++P + ++ + +P
Sbjct: 204 LDAVPHISGVNNHMGSLFTEDEEKLAIVMAELEKRGLFFIDSRTTPYSKAAKVSQDIGIP 263
Query: 321 YMVADLYLDDQVDRDKIREKLKGLEEIART-TGQAIGVAVAFDESIEVISQWLQQEHVRD 379
+ +++D+ D K + L + + + + + ++ +++ + + R
Sbjct: 264 FASRRIFIDNGQDYTKTCQILLDVLNKTKDGNSTLLLIGHPYPNTVSALAKIVPELKSRG 323
>gi|251793608|ref|YP_003008337.1| divergent polysaccharide deacetylase superfamily protein
[Aggregatibacter aphrophilus NJ8700]
gi|247535004|gb|ACS98250.1| divergent polysaccharide deacetylase superfamily [Aggregatibacter
aphrophilus NJ8700]
Length = 301
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 105/258 (40%), Gaps = 6/258 (2%)
Query: 133 ERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAIN 192
L+ + K ++ K V E T + A++AIV+ LG I
Sbjct: 14 SSLVRLFTPKRVVGKANV--EKTLFFLTALLLSPSVYSAKLAIVIDDLGYHPK-EDAQIL 70
Query: 193 LLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQ 252
LP +++A ++A ++G++ ++ +PM+ ++ E L + T +
Sbjct: 71 ALPQAVSVAIIPAAPHAKARNQQAHQQGRDILIHMPMETLSKTKIEGGG--LHLGMTQDE 128
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRV 312
+ R++ + + G+ N+ G+ ++ + + L F D + R++
Sbjct: 129 VKQRVQTAKHIVSNAIGMNNHMGSAATADVPLMTKLMTALREHHLFFLDSRTIGRSVAGK 188
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
+A + + + ++LDD ++++ + + A+ G AI + +I V+ +
Sbjct: 189 MAKEQGVRALDRHIFLDDSDAFADVQQQFQAAVQYAQKHGTAIAIGHPRKNTIAVLQAGI 248
Query: 373 QQEHVRDVSVVPLSCLAK 390
DV +V + L +
Sbjct: 249 ANLPS-DVQLVSMGSLWR 265
>gi|34558176|ref|NP_907991.1| putative periplasmic protein [Wolinella succinogenes DSM 1740]
gi|34483895|emb|CAE10891.1| PUTATIVE PERIPLASMIC PROTEIN [Wolinella succinogenes]
Length = 366
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 62/379 (16%), Positives = 136/379 (35%), Gaps = 16/379 (4%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
K P+ S ++ +LF I L + I +A S P + P
Sbjct: 3 KNPRTASNPKNSPRKIDKGILFAIIISALLLGIFGGYALFNAFSAPAPKEKLEHPKFPPA 62
Query: 72 TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTI 131
P + SP + T + ++ ++ S +P S+ + P
Sbjct: 63 -TPPKAQISPSPLAPEPKT-----EQLIDKNLALLEELASKNLPKEEPHTPPSLSNEPDK 116
Query: 132 EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAI 191
L K + + + + + S R+AI++ +G + I
Sbjct: 117 LALLTPAPPPKVSEPQTLLAPKKPKAAPLALPL---GSKPRLAIIIDDVGFMPQAEE--I 171
Query: 192 NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQ 251
LP +T + G + + A K+ ++ +P++A + E + L++ +
Sbjct: 172 KKLPFRVTPSIFPKGKFNPKSHEIA-KEFDFFMVHLPLEAREFYQKEHEW--LRIEDKEE 228
Query: 252 QLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTR 311
++ +++ R + N+ G+ N + K + L F D ++P +
Sbjct: 229 KIEAKIKALKRDFPRLTHLNNHTGSKFTENLPAMRRFLKVLEEENLTFVDSRTTPYSKAP 288
Query: 312 VLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQW 371
+ + + D++LD++ I+++L+ +IA+ G AI + E+ + + +
Sbjct: 289 QIFEEEGKLLLSRDVFLDNERSISYIKKQLQEAVKIAKKRGYAIAIGHPHAETFQAL-RG 347
Query: 372 LQQEHVRDVSVVPLSCLAK 390
V V + L K
Sbjct: 348 SSHLKEE-VEFVYVKDLFK 365
>gi|282858015|ref|ZP_06267216.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584169|gb|EFB89536.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 323
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 7/282 (2%)
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-EDTEVPAMDKNFCSNA 168
V++ R + P++E+ L K L+A + V R + +P K + A
Sbjct: 38 AENAVVLSAEERLWRPGAFPSLEKTLS-STKKTILVAASWVARLQSAALPKKGKP--AAA 94
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S +A+V+ G + +R I L T A + + A K+GQ +L +P
Sbjct: 95 SRPGLALVIDDFGYNYGMAER-IARLKLRATWAIIPGTPHSLKIAEYAAKQGQPFLLHVP 153
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQA + N +Y + + +++ L + G+ N+RG+ S+ +
Sbjct: 154 MQALGDP-NGGRNYVIGIDVPEKKMAEYLASLQKDFPRAIGINNHRGSKATSDAPTMRRF 212
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
K + F D +S + + + +A + +P + +++D D ++ + +A
Sbjct: 213 MKALSATRWGFLDSHTSGKTVAQKVALEYRIPVVQNKVFIDGTTDLSAMKAQFNAALRLA 272
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
R G A+ + A + ++ ++ +L + + V +V + +
Sbjct: 273 RKYGNAVAICHAREGTLPFLA-YLSKLDLNPVKLVTVDEIWN 313
>gi|223039675|ref|ZP_03609961.1| divergent polysaccharide deacetylase family [Campylobacter rectus
RM3267]
gi|222879058|gb|EEF14153.1| divergent polysaccharide deacetylase family [Campylobacter rectus
RM3267]
Length = 549
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 108/270 (40%), Gaps = 9/270 (3%)
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVS 178
+S E++ + + NK G++ A K S R+ I++
Sbjct: 288 TPQSAEPSEKEKDEKKKAKKEGEAKFAGSNKSGKKAG---AEIKAAVKAGSKPRLVIIID 344
Query: 179 GLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
+ AI + +T +F + ++ A++ ++ +PMQA +
Sbjct: 345 DVAYRHQA--DAIRSVNLKLTPSFFPSTSAHPETPILARR-FSFYMIHLPMQALGG-FKG 400
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
+ TL + +++ +L+ R + N+ G+ S+ + + + + L+
Sbjct: 401 AEIGTLTINDDYEKIAKKLQSIKRDFPDLKYINNHTGSRFTSDAAAMDRLMRAVRDENLI 460
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
F D ++ A K ++PY+ D++LD + +R++LK E+A+ AI +
Sbjct: 461 FVDSKTTSPTKVYGAAKKYSMPYIARDVFLDHDGSKAAVRKQLKYAVELAKKRSYAIAIG 520
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++EV+ + + V +V L L
Sbjct: 521 HPHKNTLEVLRESAKLLQE--VEIVYLKDL 548
>gi|325474776|gb|EGC77962.1| hypothetical protein HMPREF9353_00809 [Treponema denticola F0402]
Length = 390
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 59/362 (16%), Positives = 138/362 (38%), Gaps = 10/362 (2%)
Query: 27 LGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR 86
+ FL C ++ + ++I+ S V E + I + I +K +
Sbjct: 34 IAGFLAVCVIMLAVFLFIIPS---VKNKDETTNKTQIAKEQEKIKEEKPKIAEKPPIESK 90
Query: 87 DNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLA 146
+ + K +Q + + + KT+ +KP P E + +
Sbjct: 91 AKDKRTEKTKETETQAAKNLPKEAAKKTLQDKPKEI----EKPNRENKAKKPENPIITDK 146
Query: 147 KNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNG 206
+E ++ S ++ V G + Q ++ LP T+A
Sbjct: 147 PKPQEQEPDVSAYPIQDLPELPSKGKLIFVFDDAGHNLEQLQYFLD-LPFPCTIAVLPKL 205
Query: 207 NSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTG 266
+ + + G+E IL PMQA + +K +++ + ++
Sbjct: 206 PNSRETARRIRAAGKELILHQPMQALN-PNINPGDGAVKPGMDREEIKKIVASNVEEIGP 264
Query: 267 YFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADL 326
G+ N+ G+++ S++++ E + + ++ + F D +S +++ +A KLN+ +
Sbjct: 265 IAGMNNHEGSLITSDEKAMEAVLELCKEKNIYFLDSRTSSKSVVPQVAKKLNMNIWERAV 324
Query: 327 YLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV-ISQWLQQEHVRDVSVVPL 385
+LD++ D+ +++++ EIA G+AI + F + + + + +
Sbjct: 325 FLDNKKDKAYMKKQIIEGLEIASQRGEAIMIGHVFTVDLAILLKEMYSDLTQEGYIFSTI 384
Query: 386 SC 387
S
Sbjct: 385 SK 386
>gi|291287716|ref|YP_003504532.1| hypothetical protein Dacet_1812 [Denitrovibrio acetiphilus DSM
12809]
gi|290884876|gb|ADD68576.1| protein of unknown function DUF610 YibQ [Denitrovibrio acetiphilus
DSM 12809]
Length = 399
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 43/219 (19%), Positives = 89/219 (40%), Gaps = 2/219 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
IA V+ G S+ ++ + P +T+A + + + A K G+ L PMQ
Sbjct: 181 IAFVIDDCGYSEELAEK-LAAFPYPMTMAIIPHTEYAKKTAEIAYKAGKVVFLHQPMQPL 239
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYF-GVMNYRGAMLLSNKESAEVIFKE 291
+ + + + + L ++ G G N+ G+ + ++E + +FK
Sbjct: 240 SYPKTDPGKGAVLLNMPEKIIQTSLNSNVASLGGKIDGFNNHMGSAITQDREKMKQVFKV 299
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
K F D +S + + + ++D++ D IR K+ EIART
Sbjct: 300 MKKYTDTFLDSYTSRDTVAFDQCKAEGMKCAINRKFIDNESDYSYIRSKIIEGAEIARTD 359
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G I + + ++ + + L + ++VP++ L +
Sbjct: 360 GSVIMIGHLRESTVHALEKILPELEKAGYNIVPVTELTQ 398
>gi|242309714|ref|ZP_04808869.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523715|gb|EEQ63581.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 338
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 47/257 (18%), Positives = 104/257 (40%), Gaps = 15/257 (5%)
Query: 142 KELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA 201
+++ + T++P+ K C ++AI++ + S + I +P IT +
Sbjct: 86 PPPISQESKPTKPTQIPSKPKTQCQ-KPKPQLAIIIDDI--SNFYQYQKIQEIPYKITPS 142
Query: 202 FASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSL 261
+ + AKK ++ +P++A + S E L T + Q + ++
Sbjct: 143 LFPRSIASQNTPEIAKKADF-YMVHLPLEALNFSQKEH--KYLLSTDSKQTIQETIQNLK 199
Query: 262 RRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTR---------V 312
+ + N+ G+ ++ + + + + F D ++P TR
Sbjct: 200 KDFPNLTYLNNHTGSKFTQTPQAMYFLLEILNENNISFVDSRTTPHTKTRNYYQQNPTTP 259
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
L N P++ D++LD+++D KI + L +IA+T G AI + ++I +
Sbjct: 260 LNQCQNQPFLERDIFLDNELDITKITQNLIQAVKIAKTKGYAIAIGHPHQQTILALKNAT 319
Query: 373 QQEHVRDVSVVPLSCLA 389
+ +V ++ L
Sbjct: 320 NYLQNSGIELVYINELV 336
>gi|224373177|ref|YP_002607549.1| putative periplasmic protein [Nautilia profundicola AmH]
gi|223588750|gb|ACM92486.1| putative periplasmic protein [Nautilia profundicola AmH]
Length = 330
Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 10/237 (4%)
Query: 157 VPAMDK---NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
+P K F + ++ I++ + S G + I +P IT +F N
Sbjct: 99 LPPKTKEKPAFIPLSKKPKLVIIIDDV--SFKGQVKKIKKIPYKITPSFFPPTNRHPNTA 156
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
AK+ ++ +PMQA + TL + + +L+R+ + + N+
Sbjct: 157 VYAKEFSH-YMVHLPMQAIHFKK--PEPKTLNINDSYLTILSRIDEIKKMFPKAKFINNH 213
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ SNKE+ +F+ + F D ++P + + + +P +++LD++ +
Sbjct: 214 TGSTFTSNKEAMIKLFRALKTENMGFVDSKTTPNSKAKEAQKEFYIPLYSRNIFLDNEEN 273
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IR +LK +IA+ G AI + ++E + + ++++ VV + L+K
Sbjct: 274 PTYIRNQLKKAVKIAQKRGYAIAIGHPHSITLETLKN--STDILKNIDVVYIDELSK 328
>gi|83309401|ref|YP_419665.1| skin secretory protein xP2 precursor [Magnetospirillum magneticum
AMB-1]
gi|82944242|dbj|BAE49106.1| Skin secretory protein xP2 precursor [Magnetospirillum magneticum
AMB-1]
Length = 479
Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 73/347 (21%), Positives = 145/347 (41%), Gaps = 18/347 (5%)
Query: 52 GTISEMIPYSVIREIAP-IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG----QI 106
G+ E P + + + P +T+P + P + +
Sbjct: 139 GSKPEAKPDAKVAALPPDGKVTLPPGGDYVAEPESPVSKAFAPKPPPAVDSSGMPTQPNP 198
Query: 107 QNDISGKTVVNKPTRSTSIDSLPT-IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
++ + P + +LP + + + +L + G++ +V A + +
Sbjct: 199 RSAEKPPSYEGLPAHKGEVKALPPAPNKEMQKRTAIGDLPVPSPDGKQPWQVYA--RPWS 256
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
A ++A+VV +G+ + T+ AI LP +TLAF+ LD+W+K+A+ G E ++
Sbjct: 257 GPADRGKVAVVVMDMGLDKAATEAAIAKLPPEVTLAFSPYAQGLDKWVKKARDYGHEVMM 316
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+P A + + + + L RL + RG Y G+++ G ++++
Sbjct: 317 VLPADASGAQPRDPGPLGMTNSVPPESNLARLEGVMARGGAYTGLIS-LGDKFAASEQIV 375
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ + K GLL+ G++P + T LAP + ADL+ R+ I + +
Sbjct: 376 QTLGK-LRDHGLLYVGPGAAPADRTPALAPVTAV--ADADLF------REAIEMRFNQVS 426
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
ART G+A+ V S + + WL + + +VP+S L +
Sbjct: 427 IAARTKGKALVVINPRPLSFDRLLPWLNDFDGQKLVIVPVSTLVQPP 473
>gi|307721625|ref|YP_003892765.1| hypothetical protein Saut_1709 [Sulfurimonas autotrophica DSM
16294]
gi|306979718|gb|ADN09753.1| protein of unknown function DUF610 YibQ [Sulfurimonas autotrophica
DSM 16294]
Length = 328
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 118/273 (43%), Gaps = 15/273 (5%)
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGRE------DTEVPAMDKNFCSNASGARIAIV 176
I P + + + KKE A E A K S ++AI+
Sbjct: 63 AKIPKAPVSVNKRLKEVLKKETKAYASAAHEIDDETLANPPKAKAKKVEIYTSKPKLAII 122
Query: 177 VSGLGISQTGTQ-RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
+ + QT +Q RA+ L N+T++F + K A + + ++ +PM+A S
Sbjct: 123 IDDM---QTTSQVRAVKSLHLNVTMSFLPPRAARPNSAKLASHE-KFYMVHLPMEAMHFS 178
Query: 236 YNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKR 295
E +TL++ + Q++ +++ + + N+ G+ +N+ + +
Sbjct: 179 AEE--PHTLRIYDSQQKISAKIKDIKKLFPKVGYINNHTGSKFTANEVAMNRLIFALNTN 236
Query: 296 GLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAI 355
+ F D ++ + + + L Y+ D++LD +D+ I +++K +A++ G AI
Sbjct: 237 HIHFIDSRTTAKTMAPKVLKNFGLKYVSRDVFLDHHMDKPYILKQIKKAIAVAKSHGSAI 296
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ +++ + + ++ +DV +V ++ +
Sbjct: 297 AIGHPHKNTLQAL--YESKDLFKDVELVQVNKI 327
>gi|23015121|ref|ZP_00054907.1| COG2861: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 474
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 72/342 (21%), Positives = 140/342 (40%), Gaps = 21/342 (6%)
Query: 55 SEMIPYSVIREIAPIPLT---IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
+ A P P + K K + + +
Sbjct: 144 PPAEAKPDTKTAALPPGDYVAEPESPVSKAFAPKPPPAVDSSGMPTQP-----NPRAADK 198
Query: 112 GKTVVNKPTRSTSIDSLPT-IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ P R + +LP + + + +L + G++ +V A + + A
Sbjct: 199 PPSYEGLPERKGEVKALPPAPNKEMQKRTAIGDLPVPSPDGKQPWQVYA--RPWSGPADR 256
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++A+VV +G+ + T+ AI LP +TLAF+ LD+W+K+A+ G E ++ +P
Sbjct: 257 GKVAVVVMDMGLDKVATEAAIAKLPPEVTLAFSPYAQGLDKWVKKARDYGHEVMMVLPAD 316
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ + + + + L RL + RG Y G+++ G ++++ + +
Sbjct: 317 SNGTQPRDPGPLGMTNSVPPESNLARLEGVMSRGAAYTGLIS-LGDKFAASEQVVQ-MLG 374
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ RGLL+ G++P + T LAP + ADL+ R+ I +L + ART
Sbjct: 375 QLRDRGLLYVGPGAAPADRTPALAPVTAV--ADADLF------REAIEMRLNQVSIAART 426
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
G+A+ V S + + WL + + +VP+S L +
Sbjct: 427 KGKALVVINPRPLSFDRLLPWLNDFDGQKLVIVPVSTLVQPP 468
>gi|255321385|ref|ZP_05362545.1| ferric-uptake regulator [Campylobacter showae RM3277]
gi|255301538|gb|EET80795.1| ferric-uptake regulator [Campylobacter showae RM3277]
Length = 545
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 93/227 (40%), Gaps = 6/227 (2%)
Query: 162 KNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
K R+ I++ + AI + +T +F ++ A++
Sbjct: 324 KAAVKAGYKPRLVIIIDDVAY--KHQADAIKAVNLKLTPSFFPATSAHPETPVLARR-FS 380
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSN 281
++ +PMQA + + TL V +++ +L+ R + N+ G+ S+
Sbjct: 381 FYMIHLPMQALGG-FKGAEIGTLTVDDDYEKIAKKLQSIKRDFPNLKYINNHTGSRFTSD 439
Query: 282 KESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + + + L+F D ++ A K ++PY+ D++LD + +R++L
Sbjct: 440 AAAMDRMMRAVRDENLIFVDSKTTSPTKVYGAAKKYSMPYIARDVFLDHDGSKAAVRKQL 499
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
K ++A+ AI + ++EV+ + + V VV L L
Sbjct: 500 KYAVKLAKNRSYAIAIGHPHKNTLEVLQESAKLLQE--VEVVYLKDL 544
>gi|89100427|ref|ZP_01173290.1| hypothetical protein B14911_20563 [Bacillus sp. NRRL B-14911]
gi|89084856|gb|EAR63994.1| hypothetical protein B14911_20563 [Bacillus sp. NRRL B-14911]
Length = 259
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLL 254
IT A + + + A + G E ++ +PM+ + + + +++
Sbjct: 50 DIPITAAVMPFTDQTAQHAEWAHENGFEVMVHLPMEPKRGKKSWLGPKPITTNLSSEEVR 109
Query: 255 NRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
R+ ++ G+ N+ G+ + ++ I K +R L D G+SP + ++A
Sbjct: 110 KRVNEAIDSVPYAKGLNNHMGSRAVEDEGIVREIVKIAKERKLYIVDSGTSPESKFPIIA 169
Query: 315 PKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV----ISQ 370
+L +P + D++LDD +R ++K L I G+ I + + +V I Q
Sbjct: 170 KELGVPLIKRDVFLDDISSVSHVRRQMKKLALITEQQGRGIAIGHVG-VTGKVCSAGILQ 228
Query: 371 WLQQEHVRDVSVVPLSCLA 389
+ + + P+S +
Sbjct: 229 EKGYFEEKGIRIAPVSEII 247
>gi|228984507|ref|ZP_04144684.1| hypothetical protein bthur0001_12120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775210|gb|EEM23599.1| hypothetical protein bthur0001_12120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 215
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 89/216 (41%), Gaps = 5/216 (2%)
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
GT + ++ LP +T+A S A KKG E I+ +PM+
Sbjct: 1 MKGTDKMLS-LPIPLTVAVMPFLPSTKEDAIAAHKKGHEVIIHMPMEPIKGKKEWLGPKA 59
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
+ + +++ NRL +++ G+ N+ G+ + +++ +I K GL + D
Sbjct: 60 ITTDLSDEEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSK 119
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV---A 360
++P+++ + +L +P + L+ DD I ++ + L + + + +
Sbjct: 120 TNPKSVVPKIGKELGVPIIENQLFFDDVYTAAHISKQAQLLIKKLQEKPIMVAIGHVGPP 179
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+ + VI + + + LS LA P S
Sbjct: 180 GEITSRVIETSIPKIREHA-DFIFLSDLALSPPPVS 214
>gi|229022892|ref|ZP_04179412.1| hypothetical protein bcere0029_12380 [Bacillus cereus AH1272]
gi|228738427|gb|EEL88903.1| hypothetical protein bcere0029_12380 [Bacillus cereus AH1272]
Length = 209
Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 4/209 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ LP +T+A S + A KKG E I+ +PM+ + +
Sbjct: 1 MLSLPIPLTIAVMPFLPSTKQDAIAAHKKGHEVIIHMPMEPIRGKKEWLGPKAITTDLSD 60
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+++ NRL +++ G+ N+ G+ + +++ +I K GL + D ++P ++
Sbjct: 61 EEINNRLEQAIQEIPHAIGMNNHMGSKVTADERIVRLILSACKKHGLFYLDSKTNPNSVV 120
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEV 367
+ +L +P + L+ DD I + + L + + + + + + V
Sbjct: 121 PKIGKELGVPVIENQLFFDDVYTASHISRQAQLLIKKIQEKPIMVAIGHVGPPGEITSRV 180
Query: 368 ISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
I + + + LS L P S
Sbjct: 181 IETSIPKVREHA-DFIFLSDLVLSPPPVS 208
>gi|296274361|ref|YP_003656992.1| hypothetical protein Arnit_2837 [Arcobacter nitrofigilis DSM 7299]
gi|296098535|gb|ADG94485.1| protein of unknown function DUF610 YibQ [Arcobacter nitrofigilis
DSM 7299]
Length = 388
Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 141 KKELLAKNKVGREDTEVPA-MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANIT 199
+K LL + G EV +K +++ +++IV+ + + I + I
Sbjct: 142 QKPLLPALEEGMIHKEVEKNKEKIVTKSSNKPKLSIVIDDV--TLQSQINRIKDIGYTIN 199
Query: 200 LAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRY 259
++ + AK A++ P+QA S ++ TLKV + +++ R+
Sbjct: 200 ISLMPPTKGHKNSARIAKNLPF-ALVHFPLQAGITSIKFEEQNTLKVGDSYEKIEKRVAQ 258
Query: 260 SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNL 319
+ N+ G++ S+K S E + K K F D ++ ++ R + + +
Sbjct: 259 IRKWYPKIKYTNNHTGSVFTSDKTSMEYLIKALKKYNFQFIDSRTTSHSVVREVTKEFGM 318
Query: 320 PYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRD 379
PY+ +++LD+ D + I+ +LK IA+ TG AI + + ++EV+ + + ++D
Sbjct: 319 PYIARNIFLDNNKDFNYIQNQLKKAIRIAKKTGSAIAIGHPYPITMEVLKK--SKYLLKD 376
Query: 380 VSVVPLSCL 388
+ +V ++ L
Sbjct: 377 LDLVYINKL 385
>gi|229065441|ref|ZP_04200691.1| hypothetical protein bcere0026_54560 [Bacillus cereus AH603]
gi|229132227|ref|ZP_04261084.1| hypothetical protein bcere0014_11660 [Bacillus cereus BDRD-ST196]
gi|228651275|gb|EEL07253.1| hypothetical protein bcere0014_11660 [Bacillus cereus BDRD-ST196]
gi|228715835|gb|EEL67605.1| hypothetical protein bcere0026_54560 [Bacillus cereus AH603]
Length = 215
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYT 243
GT + ++ LP +T+A S + A KKG E I+ +PM+
Sbjct: 1 MKGTDKMLS-LPIPLTVAVMPFLPSTKQDAIAAHKKGHEVIIHMPMEPIRGKKEWLGPKA 59
Query: 244 LKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303
+ + +++ NRL +++ G+ N+ G+ + +++ +I K GL + D
Sbjct: 60 ITTDLSDEEINNRLEQAIQEIPHAIGMNNHMGSKVTADERIVRLILSACKKHGLFYLDSK 119
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV---A 360
++P ++ + +L +P + L+ DD I ++ + L + + + +
Sbjct: 120 TNPNSVVPKIGKELGVPIIENQLFFDDVYTVSHISKQAQLLIKKIQDKPIMVAIGHVGAP 179
Query: 361 FDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
+ + +I + + + LS LA LS PS
Sbjct: 180 GEITSRIIETSIPKIREHA-DFIFLSDLA-LSPPS 212
>gi|291288857|ref|YP_003505673.1| hypothetical protein Dacet_2967 [Denitrovibrio acetiphilus DSM
12809]
gi|290886017|gb|ADD69717.1| protein of unknown function DUF610 YibQ [Denitrovibrio acetiphilus
DSM 12809]
Length = 431
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 13/255 (5%)
Query: 148 NKVGREDTEVPAMDKNFCSNASG---ARIAIVVSGLGISQTGTQRAINLLPANITLAFAS 204
V + P+ + A A++A+V+ G S + ++ + L T A
Sbjct: 178 TTVQKRKPAAPSKPEPVIPPAKKTFKAKLAVVIDDCGYSMSLAKQ-LAALQYPATFAVIP 236
Query: 205 NGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRG 264
A+K G+ L PMQ + L + + + +
Sbjct: 237 FTPYGKETALLARKAGKPVFLHFPMQPRSYPKFDPGKGALFLNMPETVIAAVTKANFDYF 296
Query: 265 T-GYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMV 323
G N+ G+ ++E E KE +K F D +S + + + L
Sbjct: 297 PIKLDGANNHTGSAFTESREKMEQALKEISKYTPGFLDSHTSRATVAYDVCKETTLKCGR 356
Query: 324 ADLYLDDQV--------DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQE 375
D++LD++ R+ + + L + A G AI + ++I V+ +Q
Sbjct: 357 NDIFLDNEEPGLVTKSAKRNHVHDVLMQAAKKALANGSAIAIGHLRKDTISVLENSFRQI 416
Query: 376 HVRDVSVVPLSCLAK 390
V +VP++ L
Sbjct: 417 EEMGVEIVPVTSLMN 431
>gi|1573763|gb|AAC22414.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
Length = 231
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
+P I++A +EAK +G++ ++ +PMQ ED L + + Q+
Sbjct: 1 MPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQPVSAVKIEDGG--LHLGMSAAQV 58
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
+R+ + G+ N+ G+ ++ + + ++ L F D + +++ +
Sbjct: 59 NDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKI 118
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
A + + + ++LDD + ++ + K AR G AI + +I V+ L+
Sbjct: 119 AKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLR 178
Query: 374 QEHVRDVSVVPLSCLAK 390
D+ +V + L +
Sbjct: 179 NLP-EDIQLVGMGNLWR 194
>gi|56963524|ref|YP_175255.1| hypothetical protein ABC1759 [Bacillus clausii KSM-K16]
gi|56909767|dbj|BAD64294.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 266
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 85/219 (38%), Gaps = 5/219 (2%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ G + G A +T+A N A + G E I+ +P++
Sbjct: 32 VAIIIDDFGGNVKGVD-AFLQGDIPVTVAIMPNMPYTTEQAIAAHENGLEVIIHLPLEPK 90
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + + V + +++ RLR + + G+ N+ G+ + +K +I +
Sbjct: 91 NGKASWLGPNGITVDLSNEEINKRLREAYEQIPYAVGLNNHMGSKAMEDKRIVGLIVEFA 150
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV-DRDKIREKLKGLEEIARTT 351
GL D ++P ++ LA K +P L+LDD + +++ K++
Sbjct: 151 KTNGLYLVDSKTTPHSVMPELALKAQIPCFENKLFLDDTLSTTQQVQAKMQTFAAKGNMH 210
Query: 352 GQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSC 387
I + +++ I L + +V S
Sbjct: 211 QHPIAIGHVGVKGEQTYAGIKAGLPHLKKQGYKLVFPSA 249
>gi|227824417|ref|ZP_03989249.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904916|gb|EEH90834.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 333
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 146 AKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN 205
+E + A R+AIV+ G Q G R + LP +T A
Sbjct: 92 VPPAAKKESAKADENSLGLAPGAYKGRLAIVIDDCGY-QLGPVRTLTSLPLKMTFAVIPF 150
Query: 206 GNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGT 265
+ + + G A+L +PM+ +E + + V QT Q+ + ++ ++
Sbjct: 151 KPNSAAALSIIRNSGHTAMLHLPMEPVSGGSSE--TRFVGVGQTKAQIASFVQEAIDSLP 208
Query: 266 GYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVAD 325
G GV N++G+ ++ + + GL F D ++ + A L +P
Sbjct: 209 GISGVNNHQGSKATAHGPTIRAALSVIGENGLFFIDSRTNSATVAEREAGNLGIPTGHNS 268
Query: 326 LYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
L+LD+ D I EK+ ++A G I + A + E + + +++VP
Sbjct: 269 LFLDNSSDIGAIEEKIAQAVKLADRYGSVIVICHARPNTAEAWKRSYKAVIQSGITLVPA 328
Query: 386 SCLAK 390
+ L +
Sbjct: 329 ASLLQ 333
>gi|47566220|ref|ZP_00237248.1| hypothetical protein exported protein [Bacillus cereus G9241]
gi|47556773|gb|EAL15104.1| hypothetical protein exported protein [Bacillus cereus G9241]
Length = 209
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 85/209 (40%), Gaps = 4/209 (1%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+ LP +T+A S A KKG E I+ +PM+ + +
Sbjct: 1 MLSLPIPLTVAVMPFLPSTKEDAIAAHKKGHEVIIHMPMEPIKGKKEWLGPKAITTDLSD 60
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+++ NRL +++ G+ N+ G+ + +++ +I K GL + D ++P+++
Sbjct: 61 EEINNRLEQAIQEVPHAIGMNNHMGSKVTADERIVRLILAACKKHGLFYLDSKTNPKSVV 120
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEV 367
+ +L +P + L+ DD I ++ + L + + + + + + V
Sbjct: 121 PKIGKELGVPIIENQLFFDDVYTAAHISKQAQLLIKKLQEKPIMVAIGHVGPPGEITSRV 180
Query: 368 ISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
I + + + LS LA P S
Sbjct: 181 IETSIPKIREHA-DFIFLSDLALSPPPVS 208
>gi|154148192|ref|YP_001405976.1| polysaccharide deacetylase family protein [Campylobacter hominis
ATCC BAA-381]
gi|153804201|gb|ABS51208.1| divergent polysaccharide deacetylase family [Campylobacter hominis
ATCC BAA-381]
Length = 354
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 53/383 (13%), Positives = 138/383 (36%), Gaps = 36/383 (9%)
Query: 11 KKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIP 70
KK K + + + + +LFC + +IL F G I P
Sbjct: 2 KKISKGRHKKRPELLKFTIIILFCIVCIAFGYWIL--ELFFGRI-------------PTE 46
Query: 71 LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPT 130
++ +Q+ S N ++ I+ V S +
Sbjct: 47 ISKTAPKAVEQNISSPKKNDEILTIEEIVKYKPNNIE--SKNVEVAKSAENSKIVGGTEI 104
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRA 190
++ L + + + + + + ++ ++ ++AI++ + S +
Sbjct: 105 SDQNLDVNTTNEISGLEGVNSQTNEKIFVKPRS-----KKPKLAIIIDDM--SNENDAKN 157
Query: 191 INLLPANITLAFAS---NGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247
+ + +T +F + K + ++ +P++A + + T+ +
Sbjct: 158 LKAVGLKLTPSFFPRSKFTPHTPQIA----KNFKHFMIHLPLEALNYKD---ELDTILIG 210
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPR 307
+ ++ ++R + N+ G+ SN+++ E ++ + F D +
Sbjct: 211 DSALRIEAKIRSIRSDFPNARFINNHTGSKFTSNQKAMERLYNVLSIYNFDFVDSLTVGN 270
Query: 308 NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEV 367
+ + +A Y+ D++LD+ + +IR+ LK ++A G AI + E+ +
Sbjct: 271 SKVQKVAQNRGKRYIYRDVFLDNIQNVAEIRKMLKKAVKVAHEKGFAIAIGHPKKETFKA 330
Query: 368 ISQWLQQEHVRDVSVVPLSCLAK 390
+ + + DV +V + + +
Sbjct: 331 LG--TSGDILGDVEIVYVDEIYE 351
>gi|149922796|ref|ZP_01911220.1| hypothetical protein PPSIR1_33531 [Plesiocystis pacifica SIR-1]
gi|149816339|gb|EDM75841.1| hypothetical protein PPSIR1_33531 [Plesiocystis pacifica SIR-1]
Length = 312
Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 106/273 (38%), Gaps = 12/273 (4%)
Query: 128 LPTIEERLILGLSKK---ELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQ 184
P E + K+ + E+ + D + + +AIV+ +G
Sbjct: 39 GPPPEPAAVDPKDKEIRARMAQWAVRDAEEWQRDEGDHRIPWDQANGHLAIVIDDVGREL 98
Query: 185 TGTQRAINLLPANITLAFAS---NGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDS 241
+ + L ++ + + ++ ++ +E +L +PM+ D + +
Sbjct: 99 DAFDKLLA-LRYPLSFSVLPNSVYTAGVQDRLRADHRRPREILLHLPMEPLDARHMSEGE 157
Query: 242 YTL----KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ + L ++ +L GV N+ G+ L ++ + + +R L
Sbjct: 158 ELGEEFLRAGDSPASLRVKVLAALGNVPHAVGVNNHMGSKLTADNRAMAALMPVLREREL 217
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
F D ++P + + A + +P + ++LD + + IR L E AR + +
Sbjct: 218 YFLDSRTNPETVAAIEARRAGVPTISRKVFLDHEPGKAAIRRSLFEAAEFARDQPT-VAI 276
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A + +EV+ + L Q H + V + P+S L +
Sbjct: 277 AHPSMDVVEVLREELPQLHTQGVGIYPVSQLLR 309
>gi|206900827|ref|YP_002250509.1| divergent polysaccharide deacetylase family [Dictyoglomus
thermophilum H-6-12]
gi|206739930|gb|ACI18988.1| divergent polysaccharide deacetylase family [Dictyoglomus
thermophilum H-6-12]
Length = 389
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+IA VV + T +N P + ++ ++ K+G E ++ +PM+
Sbjct: 155 PKIAFVVDDVVEDNFWTHELLN-FPYTLNISIIP-TRKTKDIAEKVSKRGWEVLMHLPME 212
Query: 231 AFDESYNEDD--SYTLKVTQTVQQLLNRLRYSLRRGTGYF--GVMNYRGAMLLSNKESAE 286
+ + S + V ++ N ++ L R V N+ G+ + + E+ E
Sbjct: 213 SISYPRDAKYLVSEAIMVGMDEVEIENIIKTHLERFGNVKISWVNNHMGSKVTQDSETME 272
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ K F K L F D + ++ +A + +P + L++D + D ++I+ +
Sbjct: 273 RVIKVFKKYNLAFLDSRTILNSVGYKMANRSGIPALENMLFIDHENDEERIKARFIQAVN 332
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
IA+ G + + ++I+V+++ ++ D+ +V +S L ++ S S
Sbjct: 333 IAKKRGWGVFILHLRPKTIKVLNELDKEGFFNDLDLVRISDLYEVISEHS 382
>gi|294102438|ref|YP_003554296.1| protein of unknown function DUF610 YibQ [Aminobacterium colombiense
DSM 12261]
gi|293617418|gb|ADE57572.1| protein of unknown function DUF610 YibQ [Aminobacterium colombiense
DSM 12261]
Length = 343
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 102/265 (38%), Gaps = 4/265 (1%)
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQT 185
S P + + K + + A +N IAIV+ G S +
Sbjct: 74 QSEPAFGSASSGDIVTHSNFDREKEINTEIKAEAEGENRDEGEPLPVIAIVIDDFGFSYS 133
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
++ I + +T A + A K ++ +PM+A + + +
Sbjct: 134 LAEK-IAAIDLPVTWAIIPYQRFTHETARLAASKNIPYLVHMPMEALADKSQ--GASLIG 190
Query: 246 VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS 305
V + L +R G G+ N+RG+ S+K++ E + + +F D +S
Sbjct: 191 VGMSAPALSKVVRDVFALLPGAVGMNNHRGSKATSDKKTMEALMETLRPLEKVFVDSRTS 250
Query: 306 PRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESI 365
++ +A +P + ++LD + D + +R++ + IA+ G + + ++I
Sbjct: 251 SCSVAYDMALCYGIPAVYNSVFLDHEKDIEFMRKQFQRAITIAKRRGWVLAICHNRPDTI 310
Query: 366 EVISQWLQQEHVRDVSVVPLSCLAK 390
+ + L ++ V V + L +
Sbjct: 311 PFLQE-LCDSNINVVKFVTVPELLE 334
>gi|88798902|ref|ZP_01114484.1| hypothetical protein MED297_12627 [Reinekea sp. MED297]
gi|88778382|gb|EAR09575.1| hypothetical protein MED297_12627 [Reinekea sp. MED297]
Length = 259
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 6/228 (2%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
R+ +V+ LG AI LP+ T+A + A G+E I+ PM
Sbjct: 27 SGRLVLVMDDLGNQYRLGLDAIA-LPSVTTVAIMPGRPYTRELAEYAHSLGKEVIIHAPM 85
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
L + + LL LR ++ G+ N+ G+ L + E+ I
Sbjct: 86 ANLT--DFPLGPMGLTREKGPESLLKNLRDAIDSVPYAVGLSNHMGSRLTQDGEAMGWIM 143
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+E ++ L FFD + ++ +A +P+ ++LD I + +
Sbjct: 144 QELKRQNLYFFDSKTIASSIAWQVAQNHFIPWSSRQVFLDHYQTEAFIASQWRLALAQVD 203
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV-VPLSCLAKLSSPSS 396
+A + E++ ++E +D + VPLS + +S
Sbjct: 204 QGQTVTVIAHPYPETLAFFQN--RREMTQDTAFSVPLSHVLNYPVMTS 249
>gi|283954085|ref|ZP_06371610.1| hypothetical protein C414_000080075 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794364|gb|EFC33108.1| hypothetical protein C414_000080075 [Campylobacter jejuni subsp.
jejuni 414]
Length = 361
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAK 217
A D N N+ ++AI++ + +Q +A+NL + +F + K A
Sbjct: 136 AEDINLNKNSKKPKLAIIIDDMANANQVRGLKALNL---KLNPSFFPPDKNHSETPKLAL 192
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
K ++ +P+ A + N+ + TL + +++L +++ + + N+ G++
Sbjct: 193 K-FDFYMVHLPLAAINY--NKPELDTLNPNDSKERILKKIKQIKKDFKNLRYINNHTGSL 249
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
SN+E+ +++ + + F D + + +A +L++PY+ D++LD++ D + +
Sbjct: 250 FTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELSIPYIQRDVFLDNEDDVNYV 309
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+++LK E+A+ G AI + + + + Q V +V LS +
Sbjct: 310 KKQLKSAVELAQKKGFAIAIGHPRKNTFKALEQSKDLLKS--VELVYLSEI 358
>gi|51892007|ref|YP_074698.1| hypothetical protein STH869 [Symbiobacterium thermophilum IAM
14863]
gi|51855696|dbj|BAD39854.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 252
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 89/245 (36%), Gaps = 4/245 (1%)
Query: 148 NKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGN 207
+D +AIV+ L G + + LP +T A +
Sbjct: 3 AAFAPQDGYGSVFCNARPVPGQPPLLAIVIDDLTTGAPGLEEMLR-LPYPLTFAILPDRP 61
Query: 208 SLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
+ G E IL +PM A + + Q+ +++ + L
Sbjct: 62 DAGALARRIAALGHEVILHLPMDAGEVDPQWYVGRPISSRQSDEEIQQLVSEWLAAVPEA 121
Query: 268 FGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
G+ N+ G + ++ + + + G D ++ + A ++ +P M L+
Sbjct: 122 RGMNNHMGTVATQDERVVRAVLEVARRHGKYILDSMTTENTVVPRTAVEMGVPCMQRSLF 181
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAV---AFDESIEVISQWLQQEHVRDVSVVP 384
LD + + + +L L E A T G AIG+ + + +++ L + R + +V
Sbjct: 182 LDHENGEEVVAAQLYKLAEWAETHGAAIGIGHVGVGREGTAAALAEVLPELEARGIRLVT 241
Query: 385 LSCLA 389
LS L
Sbjct: 242 LSQLL 246
>gi|327398190|ref|YP_004339059.1| hypothetical protein Hipma_0017 [Hippea maritima DSM 10411]
gi|327180819|gb|AEA33000.1| protein of unknown function DUF610 YibQ [Hippea maritima DSM 10411]
Length = 247
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 90/214 (42%), Gaps = 1/214 (0%)
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
R+AIV+ +G R L + AF + K+ K G ++ +P Q
Sbjct: 33 RLAIVIDDMGYDVALANR-FESLKMPLAFAFLPDAPFSGELSKKLSKDGFIVMIHMPSQP 91
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
D + + + + + + L ++ ++ G+ N+ G+ +L +K + I +
Sbjct: 92 IDYPKDNPGKHAIYLWTSKAETFRLLNWAYKKIPNAMGLNNHMGSAILRDKTHLDYIMEF 151
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
K L F D + +L + A K + ++LD++ + I+ +++ ++ +
Sbjct: 152 LKKHDLFFIDSATVKDSLGCIEAEKFGVMCAKRRVFLDNKKNVAYIKGQIRQALKMLKKR 211
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
+ + +++ E ++Q +Q VSVV +
Sbjct: 212 NNVVAIGHCNEKTYEALAQMKKQLKPYLVSVVFV 245
>gi|170746547|ref|YP_001752807.1| protein of unknown function DUF610 YibQ [Methylobacterium
radiotolerans JCM 2831]
gi|170653069|gb|ACB22124.1| protein of unknown function DUF610 YibQ [Methylobacterium
radiotolerans JCM 2831]
Length = 411
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 87/349 (24%), Positives = 142/349 (40%), Gaps = 9/349 (2%)
Query: 42 IYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIED----KQSPSKRDNNTVCNQLKN 97
+L G + +RE A P + P +++
Sbjct: 53 GLVLALGDPHGGEPRVQVAITMREPAARPAAQAPAAQQPQVITTEPGTAPLQRSAEEVET 112
Query: 98 DSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
S + + VV + ++ + R+ + K+G
Sbjct: 113 ASGVTVVRPAGSGPSEAVVIRVPPPSAPRLAQAPDPRISESGRHGLM---PKLGEGRIRA 169
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAK 217
+ SG RIAIVV+GLG+ Q T A LPA ++LAF G ++R A+
Sbjct: 170 LDVYARSEEAGSGPRIAIVVTGLGVGQAATAGATARLPAAVSLAFLPYGGEVERAAARAR 229
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
G E LQ+PM+ FD ++ TL + +R +++ R GY GV+NY G+
Sbjct: 230 DAGHEVFLQLPMEPFDYPDSDPGPQTLLTALKGLENADRQAWAMARFPGYVGVVNYMGSK 289
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
L+++ + E + +E RGL F DDG++ + A K P A++ LD D I
Sbjct: 290 LMAD-AAFEPVLREIGARGLGFLDDGTASKP-AVAPANKGKTPVARAEIVLDATPRADAI 347
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
L E AR G A+ A S++ I++W ++ R + +VP S
Sbjct: 348 DAALAQAEARARANGFALVSATGTPLSVDRIARWAKEIESRGLRLVPAS 396
>gi|224417738|ref|ZP_03655744.1| putative periplasmic protein [Helicobacter canadensis MIT 98-5491]
gi|253827082|ref|ZP_04869967.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141280|ref|ZP_07803473.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510488|gb|EES89147.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130311|gb|EFR47928.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 367
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 21/279 (7%)
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ DS P I+ + + ++ E + ++AI++
Sbjct: 99 STPKQQDSQPKIKSSPTIP-------QTTPIQPKEQETNTAKTTPICQKTKPQLAIIIDD 151
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
+ S R + +P IT +F + K A ++ +P++A + E
Sbjct: 152 V--SNYEQYRRLQEIPYKITPSFFPKTIASKNTPKIAATAPF-YMVHLPLEALNFYQKEH 208
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLF 299
L + Q + +R++ + + N+ G+ N ++ + + + + F
Sbjct: 209 --LWLFSDDSKQTIQDRIQAIKKDFPNLTYINNHTGSKFTQNLQAMQNLLTILNENNITF 266
Query: 300 FDDGSSPRNLTR---------VLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
D ++P+ T L P N P++ +++LD+++D KI + L E A+
Sbjct: 267 VDSRTTPKTKTALYYKNNPTKSLNPCQNTPFLERNVFLDNELDISKITQNLIKAIETAKI 326
Query: 351 TGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G AI + E+I + + + V ++ L
Sbjct: 327 KGYAIAIGHPHKETILALKNASEYLQKSGIEAVYINELI 365
>gi|220904168|ref|YP_002479480.1| hypothetical protein Ddes_0895 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868467|gb|ACL48802.1| protein of unknown function DUF610 YibQ [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 490
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 83/224 (37%), Gaps = 7/224 (3%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+A+V+ +G S L +T A + + A ++ + ++ +P
Sbjct: 246 PRPALALVIDDMGQSLEAAGALAALP-YAVTPAIWPHAPHATSTAELAAQRRMDVLVHVP 304
Query: 229 MQAF---DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
M+A D + LKV ++ L +L G+ N+ G+ + +
Sbjct: 305 MEALPRKDGTIPNPGQGALKVGMEPHRIQAILEANLASLPTAVGMNNHMGSAFTGDAAAC 364
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
++ A G D ++P +L A L L D++LD I + L
Sbjct: 365 RIVCARLAGTGFFLLDSLTTPGSLLAQQARALGLVSASRDVFLDTYRQTPAILKALDQAA 424
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
AR G AI + + E++ + W V++VPL L
Sbjct: 425 VRARIRGYAIAIGHPYAETLSALRAWQNS---EGVALVPLRRLI 465
>gi|78044631|ref|YP_360224.1| putative N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996746|gb|ABB15645.1| putative N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 448
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 93/236 (39%), Gaps = 6/236 (2%)
Query: 160 MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
K +++ I++ G + + L T A N+ + K +
Sbjct: 211 QKKQISQLKGESKLLIIIDDFGNNSDSLVDFL-KLKLPFTAAVMPFLNNTHQEAKALYQS 269
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
G + I+ +PM+ + + V T Q++ + L +L+ G+ N+ G+
Sbjct: 270 GNDIIIHLPMEPKSYKRSWLGPRPIMVNLTPQEITSLLIAALKENPWAIGINNHTGSRAC 329
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-DQVDRDKIR 338
+++ + + K L F D ++P +L +L + + + D++L+ + + I
Sbjct: 330 EDEKIVKTVLSFCQKNNLAFIDSQTTPNSLFPLLGSEFGVVVLKRDIFLEVNGKEEKNII 389
Query: 339 EKLKGLEEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
E+LK L+ IA+ I + + + + L + + + LS L K
Sbjct: 390 EQLKKLQSIAQKKNLGIAIGHVGYEGGKPTANALKKVLPELQRQGFKICTLSDLIK 445
>gi|313672937|ref|YP_004051048.1| hypothetical protein Calni_0974 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939693|gb|ADR18885.1| protein of unknown function DUF610 YibQ [Calditerrivibrio
nitroreducens DSM 19672]
Length = 408
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 94/252 (37%), Gaps = 6/252 (2%)
Query: 140 SKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANIT 199
+K+ + ++D ++ + + R+AI++ G + ++ ++ + +
Sbjct: 162 NKEMVKEPKADFKKDVKINSKNSKIEPKH---RLAIILDDSGQNLELARKVLS-MKYPVV 217
Query: 200 LAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRY 259
L+ A+K +E L PM+ + + + ++
Sbjct: 218 LSILPYTQYDRETADLARKYKREFFLHQPMEPKSYPDTNPGKGAILLNMPKSVIEVTIKE 277
Query: 260 SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL-N 318
++ R G GV N+ G+ N + + +F D ++P + + K
Sbjct: 278 NINRLEGVDGVNNHMGSAFTENADKMKEALDTIKDYTKIFVDSHTTPDTVAYEVCKKTEG 337
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVR 378
L ++ ++D+ D+D I KL ++ I + + +++V+ L Q
Sbjct: 338 LKCGISKRFIDNSADKDYITNKLYEAAGFLKSQ-DVIVIGHLRNNTVDVLEDVLPQLEKM 396
Query: 379 DVSVVPLSCLAK 390
V +V +S +
Sbjct: 397 GVRIVTISEVVN 408
>gi|86151591|ref|ZP_01069805.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124148|ref|YP_004066152.1| hypothetical protein ICDCCJ07001_579 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841220|gb|EAQ58468.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017870|gb|ADT65963.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 360
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPEIDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSIPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|88597070|ref|ZP_01100306.1| conserved domain protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|88190759|gb|EAQ94732.1| conserved domain protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|284925893|gb|ADC28245.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 360
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPEIDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|86153389|ref|ZP_01071593.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843115|gb|EAQ60326.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 360
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPEIDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|121613073|ref|YP_001000334.1| hypothetical protein CJJ81176_0661 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005280|ref|ZP_02271038.1| hypothetical protein Cjejjejuni_03335 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87250269|gb|EAQ73227.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 360
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPEIDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|283956047|ref|ZP_06373534.1| LOW QUALITY PROTEIN: hypothetical protein C1336_000100100
[Campylobacter jejuni subsp. jejuni 1336]
gi|283792367|gb|EFC31149.1| LOW QUALITY PROTEIN: hypothetical protein C1336_000100100
[Campylobacter jejuni subsp. jejuni 1336]
Length = 360
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHNETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLQSAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|257460562|ref|ZP_05625663.1| divergent polysaccharide deacetylase family protein [Campylobacter
gracilis RM3268]
gi|257441893|gb|EEV17035.1| divergent polysaccharide deacetylase family protein [Campylobacter
gracilis RM3268]
Length = 401
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 55/338 (16%), Positives = 118/338 (34%), Gaps = 13/338 (3%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
E + + +IA +T P + + N V N SQ+ +
Sbjct: 74 AEKEALIQKELDKIAEQNVTAPKMSIEPARQNSAGQNLVRQNSSNGDSQNSANSMASANS 133
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
V S S + A++ ++ + S A+
Sbjct: 134 AAV-----NSAGDGSDVNFTAANSASENSINSTAQSPASGSADDLSKSPRKALPAGSRAK 188
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ +G + + I LP +T + A+ A + +PM+A
Sbjct: 189 LAIIIDDVGTDEQA--QKIAALPVRVTPSIFPPEYQRKDTRSLARGFEHYA-IHLPMEAS 245
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
N TL+ + ++L + + N+ G+ +++ + + + +
Sbjct: 246 SAKNNSA---TLRASDNYEKLRGVIAKLRADFPNAKFINNHTGSKFTADERAMQNLLRAM 302
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+ G LF D +SP + + Y+ D++LD+Q +R+KL+ +A+ G
Sbjct: 303 NEHGFLFIDSRTSPATKAKAAMNGFGMRYVHRDVFLDNQNSVAAVRKKLREAVALAKKQG 362
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
AI + ++ ++ V +V L + +
Sbjct: 363 YAIAIGHPKSSTLRALANSSDILGE--VDLVYLDEIYE 398
>gi|315930930|gb|EFV09909.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
305]
Length = 360
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|86149913|ref|ZP_01068142.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85839731|gb|EAQ56991.1| conserved domain protein [Campylobacter jejuni subsp. jejuni
CF93-6]
Length = 360
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 107/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEVLKNQNIFFVDSKTIGNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|114776726|ref|ZP_01451769.1| hypothetical protein SPV1_10941 [Mariprofundus ferrooxydans PV-1]
gi|114552812|gb|EAU55243.1| hypothetical protein SPV1_10941 [Mariprofundus ferrooxydans PV-1]
Length = 311
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 92/241 (38%), Gaps = 4/241 (1%)
Query: 154 DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
D V A + A IA+++ G QR + L + +A + +
Sbjct: 59 DEPVQAPEPEISDAGKAAGIALILDDAGYDLPELQRML-KLGVPVAIAVIPDAPYARQAA 117
Query: 214 KEAKKKGQEAILQIPMQAFDESYNEDDSYT-LKVTQTVQQLLNRLRYSLRRGTGYFGVMN 272
A + G +L +PMQ E Y+ S L QL L GV N
Sbjct: 118 VMAHQAGHVVMLHLPMQPVSEKYSSRMSDAFLTDQMNEMQLRRTFINDLALVPYVEGVNN 177
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ L ++ + + ++GL F D +S +++ +A ++ L +LD+ +
Sbjct: 178 HMGSALTQLEKPMHWVMQVCLEKGLFFVDSVTSGKSVAGRVATEMGLERGRRQFFLDNNL 237
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
D ++ + + AR + + + +++ + + + +VPL L +
Sbjct: 238 DTPALKAMWEKVRICARKGHRCVVIGHPHRQTVTFLENNISADDRA--MMVPLKRLLHPA 295
Query: 393 S 393
S
Sbjct: 296 S 296
>gi|83858363|ref|ZP_00951885.1| polysaccharide deacetylase family protein [Oceanicaulis alexandrii
HTCC2633]
gi|83853186|gb|EAP91038.1| polysaccharide deacetylase family protein [Oceanicaulis alexandrii
HTCC2633]
Length = 322
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 103/239 (43%), Gaps = 4/239 (1%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
E P ++AI++ +G+ ++ + L A +TL+ + +
Sbjct: 82 ESPTPVAAPMLTPRRPQLAIIMDDVGLDVAAAEQLLA-LDAPLTLSILPYAEAAPVIARR 140
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
A G+E + +PM+ + Y L Q+ ++ +R+R++ R G G N+ G
Sbjct: 141 AADAGREVFVHLPMEPVG--VEDPGPYALTEFQSADEMSSRIRWAFSRVPGATGFNNHMG 198
Query: 276 AMLLSNKESAEVIFKEFA-KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
+ L S++ + + +F A L+F D + PR+ A L + D++LD D
Sbjct: 199 SRLTSDRRAMDALFTAGAFPSQLIFVDSLTHPRSQAARSARAAGLNALTRDVFLDHAPDE 258
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
+ +L +A GQAI + +++ V++ ++ V +V + L+ +S
Sbjct: 259 ASVSAQLNLALALALQNGQAIAIGHPRPQTLAVLADLTRRAEAVGVELVTVQALSATAS 317
>gi|212705014|ref|ZP_03313142.1| hypothetical protein DESPIG_03082 [Desulfovibrio piger ATCC 29098]
gi|212671566|gb|EEB32049.1| hypothetical protein DESPIG_03082 [Desulfovibrio piger ATCC 29098]
Length = 422
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 83/218 (38%), Gaps = 7/218 (3%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+ +V+ +G ++ + LP + LA + + A+ G + +L +PM+
Sbjct: 190 PALVLVIDDMGQKLEPAEQ-LASLPFPVALALWPHAAVRRSVQQVARDMGLDVLLHMPME 248
Query: 231 AF---DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
A + + L+ + + L +L + G N+ G+ +++ +
Sbjct: 249 AMPRKNGTAPNPGPGALETDMDAYAMEHALDKALAQVPTALGFNNHMGSGFTGQRDACRM 308
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ RGL D + + + + ++LDD DK+ L +
Sbjct: 309 LAGLAYGRGLFVLDSVTRGNSQLENSMVRQGIVTASRHVFLDDPQGTDKVLAALDKAARL 368
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
AR G AI + ++ + +W + V+VVPL
Sbjct: 369 ARKQGIAIAIGHPHASTLRALERWENR---EGVAVVPL 403
>gi|218562283|ref|YP_002344062.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|112359989|emb|CAL34778.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
Length = 360
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+ +
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMK 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +L++PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEALKNQNIFFVDSKTIGNSKANKIAKELSIPYIQRDVFLDNEDDVNYVKKQLENAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q ++ ++ V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQ--SKDLLKGVDLVYLSEI 357
>gi|313681712|ref|YP_004059450.1| hypothetical protein Sulku_0584 [Sulfuricurvum kujiense DSM 16994]
gi|313154572|gb|ADR33250.1| protein of unknown function DUF610 YibQ [Sulfuricurvum kujiense DSM
16994]
Length = 344
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S A++ I++ + S +AI + ++F AK++G ++ +
Sbjct: 131 GSEAKLVIIIDDV--SYARDVKAIQSTGLPLVMSFLPPSPRHPDSAALAKQQG-TYMVHL 187
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P++A +++ TL++ T +++ RL + + N+ G+ S+ + +
Sbjct: 188 PLEAVAFH--DEEPNTLRIGSTEEEIEKRLDALKQLYPNVHYINNHTGSKFTSDSAAMDK 245
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
+ + K GL F D + + R K + Y+ D++LDDQ ++++++ E
Sbjct: 246 LIRIMKKEGLQFVDSRTIGTSKGREATEKHGMRYLTRDVFLDDQDGVGNVKKQIRDAVEK 305
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
A+ G AI + ++I+ + + ++ + +V +V + +
Sbjct: 306 AKRYGTAIAIGHPRKDTIQALKE--SKDILGEVRLVGIGQI 344
>gi|257457722|ref|ZP_05622885.1| divergent polysaccharide deacetylase family protein [Treponema
vincentii ATCC 35580]
gi|257444890|gb|EEV19970.1| divergent polysaccharide deacetylase family protein [Treponema
vincentii ATCC 35580]
Length = 470
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 51/338 (15%), Positives = 123/338 (36%), Gaps = 20/338 (5%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P A P + +D+ + Q + + ++
Sbjct: 148 TPAVQKTAPAAQPSQSSSASSRTAPAAPKDSAHKETPAVRPAPQKNTVPEKSVTPD---- 203
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVV 177
K S +++P + ++ + + + + K P + A + V
Sbjct: 204 KKNTSPEKNTVPAVPDKKNTAQAVQPVQSAAK--------PEKPRRLAPYA--GNLTFVF 253
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
G + + + LP T+A + +K G++ IL PMQ+ D N
Sbjct: 254 DDAGHNLDQLEYFLR-LPFPCTIAVLPGLRYSSESARRIRKAGKQVILHQPMQSVDLHIN 312
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ + +Q+ N +R +L G+ N+ G+++ +++ + + A++ +
Sbjct: 313 -PGPGAVTPGLSAEQIKNIVRKNLEEIWPVAGMNNHEGSLMTADEAAMRAVLDVVAEKHI 371
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
F D ++ +++ +A + N+ +++D+ R + ++K IAR G AI +
Sbjct: 372 FFLDSRTTAKSVVSKVAKEKNMVVWERAIFIDNDKSRAAMETQIKKGLSIARQKGSAIMI 431
Query: 358 AVAFDESIEV-ISQWLQQEHVRDVSVVPLSCLAKLSSP 394
F + +++ S+ S +A+ +
Sbjct: 432 GHVFTVELAQLLTEMYPALIEEGFSL---SAIAQAAQK 466
>gi|305433166|ref|ZP_07402322.1| conserved hypothetical protein [Campylobacter coli JV20]
gi|304443867|gb|EFM36524.1| conserved hypothetical protein [Campylobacter coli JV20]
Length = 343
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S AR+AI++ + RA+ L + +F + K A K ++
Sbjct: 125 SKTKQARLAIIIDDMANISQV--RALQALKLKLIPSFFPPDKNHIDTPKLALK-FDFYMV 181
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+P+ A + + E D TL + + +++ +++ + + N+ G++ S++++
Sbjct: 182 HLPLAAMNYTKPELD--TLNPSDSEKRIFKKIQQVKKDFKDLKFINNHTGSLFTSDEKAM 239
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ ++K F K L+F D + + +A L Y+ D++LD++ D I+ +L
Sbjct: 240 KKLYKAFEKEELIFVDSKTIASSKAPKVAKALGQIYIQRDVFLDNRDDVAYIKNQLIEAV 299
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G AI + + + + Q V +V LS +
Sbjct: 300 RLAKQKGFAIAIGHPRKNTFKALEQSKDLLKS--VELVYLSEI 340
>gi|57167659|ref|ZP_00366799.1| probable periplasmic protein Cj0633 [Campylobacter coli RM2228]
gi|57020781|gb|EAL57445.1| probable periplasmic protein Cj0633 [Campylobacter coli RM2228]
Length = 350
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
S AR+AI++ + RA+ L + +F + K A K ++
Sbjct: 132 SKTKQARLAIIIDDMANISQV--RALQALKLKLIPSFFPPDKNHIDTPKLALK-FDFYMV 188
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+P+ A + + E D TL + + +++ +++ + + N+ G++ S++++
Sbjct: 189 HLPLAAMNYTKPELD--TLNPSDSEKRIFKKIQQVKKDFKDLKFINNHTGSLFTSDEKAM 246
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLE 345
+ ++K F K L+F D + + +A L Y+ D++LD++ D I+ +L
Sbjct: 247 KKLYKAFEKEELIFVDSKTIASSKAPKVAKALGQIYIQRDVFLDNRDDVAYIKNQLIEAV 306
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G AI + + + + Q V +V LS +
Sbjct: 307 RLAKQKGFAIAIGHPRKNTFKALEQSKDLLKS--VELVYLSEI 347
>gi|222823948|ref|YP_002575522.1| polysaccharide deacetylase domain protein [Campylobacter lari
RM2100]
gi|222539170|gb|ACM64271.1| conserved hypothetical protein, polysaccharide deacetylase domain
protein [Campylobacter lari RM2100]
Length = 355
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 69/361 (19%), Positives = 145/361 (40%), Gaps = 17/361 (4%)
Query: 29 LFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDN 88
+ L C + G+ ++ F+ + I PL+ IE + + S D
Sbjct: 10 VLLALCLVVFGIFLFA-FGALFLKKEENKVLDFNQTIIKKEPLS--PTIEQENNFSFNDI 66
Query: 89 N-TVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK 147
N T+ N+ + S ++ +I N T +N+ L I++ L+ +E
Sbjct: 67 NLTLENENLDFSDKNISEILNLNPIDTELNQTKEDNQTSILEVIDQNTSKELNNEE---- 122
Query: 148 NKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGN 207
D + + R+AI++ + S T + + +F
Sbjct: 123 --QNISDKNEGNKTQILVQKNTKPRLAIIIDDM-ASHTHVD-MLKKTNLKLIPSFFPPDK 178
Query: 208 SLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
+ AK ++ +P+ A E TL +Q++ R+ + +
Sbjct: 179 RHPYTAEFAKD-FDFFMVHLPLAAIKYDKAEL--NTLHPGDDMQKIGKRVAFVKEQFPKV 235
Query: 268 FGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327
+ N+ G++ +NK++ E +F F + +F D + ++ + LA + N PY+ D++
Sbjct: 236 KFINNHTGSLFTANKQAMEKLFSAFKQNDFVFVDSRTIGKSKAKNLASQFNQPYIARDVF 295
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
LD++ D I+ +LK E A+ G AI + +++ + + Q + + V +V L+
Sbjct: 296 LDNEDDIVYIKNQLKQAVEEAKKKGFAIAIGHPREKTFKALVQSKELLNS--VELVYLNE 353
Query: 388 L 388
+
Sbjct: 354 I 354
>gi|157163961|ref|YP_001467158.1| ferric-uptake regulator [Campylobacter concisus 13826]
gi|112801347|gb|EAT98691.1| divergent polysaccharide deacetylase family [Campylobacter concisus
13826]
Length = 483
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 111/268 (41%), Gaps = 9/268 (3%)
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVV 177
KP + + P+ + + + K K V ++D V N A++ +++
Sbjct: 221 KPEPTKKSEVEPSNKAKKQIYSEKP---QKESVKKDDFAVVPFTPNSSVKGRRAKLVLII 277
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
+ + + + + IT + + A+ + ++ +PMQA + ++
Sbjct: 278 DDVATFEHAS--MVKSIGLKITPSIFPATKTHPDTPNIART-FEFYMIHLPMQA--KHFD 332
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ TL + ++ + + +++ R N+ G+ S+ ++ + ++ ++G
Sbjct: 333 SPEIGTLTINESFESMHEKIKKIRRDFPRAKYTNNHTGSRFTSDYDAMDKAYRALIEQGF 392
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
+F D + + A K N PY+ D++LDD +R +L +A+ G AI +
Sbjct: 393 IFVDSKTIAQTAVARAAKKYNQPYISRDIFLDDDPSASAVRRELVAAVNLAKKRGYAIAI 452
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPL 385
+I VI + ++DV VV L
Sbjct: 453 GHPKKNTIAVIKA-SKNNILKDVEVVYL 479
>gi|217967182|ref|YP_002352688.1| protein of unknown function DUF610 YibQ [Dictyoglomus turgidum DSM
6724]
gi|217336281|gb|ACK42074.1| protein of unknown function DUF610 YibQ [Dictyoglomus turgidum DSM
6724]
Length = 391
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 100/230 (43%), Gaps = 6/230 (2%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+IA VV + ++ P + ++ ++ ++ ++G E ++ +PM+
Sbjct: 157 PKIAFVVDDVVEDNYWVHELLS-FPYTLNISIIP-TRKAEKVAEKIFERGWEIMMHLPME 214
Query: 231 AFDESYNEDD--SYTLKVTQTVQQLLNRLRYSLRRGTGYFG--VMNYRGAMLLSNKESAE 286
+ + + + V ++ N +R L+R V N+ G+ + + E+ E
Sbjct: 215 SITYPKDAKYLVAEAIMVGMNEDEIDNIVRTHLKRFGNIKVSWVNNHMGSKVTKDPETME 274
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ F K L F D + ++ +A +P + L++D + D +KIR +
Sbjct: 275 KVINVFKKYNLAFLDSKTILGSVAYKMANSSGIPSLENMLFIDHENDENKIRLRFLKAIN 334
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+A++ G + + ++I+V+ + ++ DV +V +S L + + S
Sbjct: 335 MAKSKGWGVFILHLRPKTIKVLKELEKEGFFADVDLVKISDLYEAINEHS 384
>gi|157414912|ref|YP_001482168.1| hypothetical protein C8J_0592 [Campylobacter jejuni subsp. jejuni
81116]
gi|157385876|gb|ABV52191.1| hypothetical protein C8J_0592 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747550|gb|ADN90820.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
M1]
Length = 360
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +LN+PY+ D++LD++ D + ++++++ +
Sbjct: 258 KLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQIQNAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+A+ G I + + + + Q V +V LS +
Sbjct: 318 LAQKKGFVIAIGHPRKNTFKALEQSKDLLKS--VDLVYLSEI 357
>gi|315638452|ref|ZP_07893629.1| periplasmic protein [Campylobacter upsaliensis JV21]
gi|315481443|gb|EFU72070.1| periplasmic protein [Campylobacter upsaliensis JV21]
Length = 334
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 95/223 (42%), Gaps = 8/223 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
++AI++ + + + + L + +F ++L + K+ + ++ +
Sbjct: 120 GQKPKLAIIIDDMANKEQVKE--LKALHLKLNPSFFP-SHTLHPNTPKLAKEFEFYMVHL 176
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P++A L + +++ + + N+ G++ S++E+
Sbjct: 177 PLKALSFQNK---MSVLSPEDSEEEIEKTIAKIKGEFKKLKFINNHTGSLFTSDEEAMRK 233
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
++K K L F D + + +A ++ Y+ D++LD++ D D ++ +L +
Sbjct: 234 LYKALDKHHLSFVDSKTIHNSKAPKIAKEMQKIYIKRDVFLDNEDDVDYVKNQLLSAVNL 293
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ G AI + + + + + +E ++ V +V LS L +
Sbjct: 294 AQKRGYAIAIGHPKKNTFKALKE--SKELLKSVDLVYLSELYE 334
>gi|312879555|ref|ZP_07739355.1| protein of unknown function DUF610 YibQ [Aminomonas paucivorans DSM
12260]
gi|310782846|gb|EFQ23244.1| protein of unknown function DUF610 YibQ [Aminomonas paucivorans DSM
12260]
Length = 338
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 102/278 (36%), Gaps = 6/278 (2%)
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
T S + + ++ + + + + R+A+VV
Sbjct: 57 TPSGAREEASSVSATPSPQREEAADSEQEASAPTAPAPSPLFLPTPVPSGVGRVALVVDD 116
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
+G +R + L +T A + K A+ G ++ +PMQA +D
Sbjct: 117 MGYDLAVARRLVG-LGLPLTWAILPDAPHAAATAKIARDAGIPYLVHLPMQAQG--DGDD 173
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF--AKRGL 297
Y + + + + R + G FGV N+RG+ +++ + E A+ G
Sbjct: 174 GPYAVASGWSAEVIRERSLRAFEALPGAFGVNNHRGSRATADRVAMERFLSVLQEARPGW 233
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
+F D ++ + +A + + D +LD + + + IR + +AR GQAI +
Sbjct: 234 IFLDSRTNGASCGFSVAQEKGIRTSRNDRFLDHRDEDEAIRAAFEAGASLARRKGQAILI 293
Query: 358 AVAFDESIEVISQWLQ-QEHVRDVSVVPLSCLAKLSSP 394
++ + + + V + L L L S
Sbjct: 294 GHPRPRTVHFLERLSRGDAIPPGVELETLPDLMGLVSE 331
>gi|118475284|ref|YP_892284.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
gi|118414510|gb|ABK82930.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
Length = 387
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 6/222 (2%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++ I++ L S R I L IT + + + + K+ + ++ +P+
Sbjct: 170 KPKLVIIIDDL--STMAQARDIKSLGLKITPSIFPPTDFYPDSV-KISKQFEFYMVHLPL 226
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+A NE TL V T ++ NR+ ++ + N+ G+ S+ S +++
Sbjct: 227 EAIFFKKNEQ--NTLNVGDTKDKIENRISTIKKQFGNVSYINNHTGSKFTSDYSSMKMLL 284
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
K +LF D +S + + + ++ L Y+ D+++D+ I ++L+ + A+
Sbjct: 285 KSMKNHNILFVDSLTSKGSKAKQVTKEMGLKYVFRDVFIDNDQSSVAIFKQLEIAIKKAK 344
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
G AI + + + E I + ++ ++DV VV L + L
Sbjct: 345 KNGFAIAIGHPYKVTFETI-KVAKKTILKDVEVVYLKDIYGL 385
>gi|213582603|ref|ZP_03364429.1| hypothetical protein SentesTyph_15928 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 230
Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
TL+ + ++ +R ++ G+ N+ G+ + S+ + + + L F D
Sbjct: 3 TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVMQALEHYNLYFLDS 62
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
+ + A + + ++LDD + IR + E+AR G AI +
Sbjct: 63 MTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNGSAIAIGHPHP 122
Query: 363 ESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
++ V+ Q + + D+++V P S L + +S
Sbjct: 123 ATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 156
>gi|313143477|ref|ZP_07805670.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128508|gb|EFR46125.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 354
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNS---LDRWMKEAKKKGQEAI 224
AS ++ +++ L S+ +A+ LP NIT + K + G+ +
Sbjct: 118 ASKPKVLLIMDDL--SKLSQIKALESLPLNITPSIFPKTRHNGITPNLAKRVIQNGKIFM 175
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +P++A + E + LKV Q L ++ + + N+ G+ +K
Sbjct: 176 IHLPLEAQNFMQKELEP--LKVGIDKQSLKEQILQIKQDFPQLVYLNNHTGSKFTQSKTD 233
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + F + L F D + P + +LA + M D++LD+Q + +++L+ L
Sbjct: 234 MKNLLEVFDELDLKFIDSVTIPNPASEILAKEQKRLIMQRDIFLDNQTNIAYTKKQLQSL 293
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ A+ G AI + + + ++Q ++ + ++ +V S L
Sbjct: 294 IQKAKKKGYAIAICHPHPSTFKALAQMQKELNA-NLELVSPSEL 336
>gi|224437004|ref|ZP_03657985.1| hypothetical protein HcinC1_03480 [Helicobacter cinaedi CCUG 18818]
Length = 360
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNS---LDRWMKEAKKKGQEAI 224
AS ++ +++ L S+ +A+ LP NIT + K + G+ +
Sbjct: 124 ASKPKVLLIMDDL--SKLSQIKALESLPLNITPSIFPKTRHNGITPNLAKRVIQNGKIFM 181
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +P++A + E + LKV Q L ++ + + N+ G+ +K
Sbjct: 182 IHLPLEAQNFMQKELEP--LKVGIDKQSLKEQILQIKQDFPQLVYLNNHTGSKFTQSKTD 239
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ + + F + L F D + P + +LA + M D++LD+Q + +++L+ L
Sbjct: 240 MKNLLEVFDELDLKFIDSVTIPNPASEILAKEQKRLIMQRDIFLDNQTNIAYTKKQLQSL 299
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ A+ G AI + + + ++Q ++ + ++ +V S L
Sbjct: 300 IQKAKKKGYAIAICHPHPSTFKALAQMQKELNA-NLELVSPSEL 342
>gi|154175021|ref|YP_001408001.1| polysaccharide deacetylase family protein [Campylobacter curvus
525.92]
gi|112803301|gb|EAU00645.1| divergent polysaccharide deacetylase family [Campylobacter curvus
525.92]
Length = 464
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 59/345 (17%), Positives = 127/345 (36%), Gaps = 22/345 (6%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
+ + + I S +++ + N+ K + + + +
Sbjct: 140 TKNLLANLPSAIAQSSVKKDKNETIVFEANVSAKTELNASVSPILQKDENKTLPKASSTP 199
Query: 107 QNDISG-KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
G V +KP + IE + KK+ K + PA
Sbjct: 200 LKTQQGHGLVASKPEK---------IELKPQKPEPKKQG----KQSKRQEFSPAPYVPTK 246
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA-I 224
+ ++ I++ + + + I +T + A+ G E +
Sbjct: 247 KFSGKPKLVIIIDDVATYEHAS--MIRSTGLKLTPSIFPMTKDHPNTPNIAR--GFEFHM 302
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PMQA + ++ + TL + + +L R+R + N+ G+ S+ ++
Sbjct: 303 IHLPMQA--KHFDHPEIGTLNTNDSFESILKRIRKIRADFPRAVYMNNHTGSKFTSDYDA 360
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ F +F D + + +A K + PY+ D++LDD R +R +L
Sbjct: 361 MDKAYRAFISEKFIFMDSKTIGHTVVAEVARKYSQPYISRDIFLDDDPSRSGVRRQLVNA 420
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
E+A+ AI + +I++I + + +RDV VV L +
Sbjct: 421 VELAKKRSYAIAIGHPKKNTIDIIKE-SKDTILRDVDVVYLKEIL 464
>gi|148926620|ref|ZP_01810301.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845139|gb|EDK22234.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 366
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 150 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 205
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 206 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 263
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +LN+PY+ D++LD++ D + ++++L+ +
Sbjct: 264 KLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQLESAVK 323
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + G I + + + + Q V +V LS +
Sbjct: 324 LTQKKGFVIAIGHPRKNTFKALEQSKDLLKS--VDLVYLSEI 363
>gi|57236946|ref|YP_178747.1| hypothetical protein CJE0736 [Campylobacter jejuni RM1221]
gi|205355483|ref|ZP_03222254.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|57165750|gb|AAW34529.1| conserved domain protein [Campylobacter jejuni RM1221]
gi|205346717|gb|EDZ33349.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|315058047|gb|ADT72376.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni
S3]
gi|315926751|gb|EFV06125.1| divergent polysaccharide deacetylase family protein [Campylobacter
jejuni subsp. jejuni DFVF1099]
Length = 360
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 40/222 (18%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +LN+PY+ D++LD++ D + ++++L+ +
Sbjct: 258 KLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQLESAVK 317
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+ + G I + + + + Q V +V LS +
Sbjct: 318 LTQKKGFVIAIGHPRKNTFKALEQSKDLLKS--VDLVYLSEI 357
>gi|328948890|ref|YP_004366227.1| hypothetical protein Tresu_2058 [Treponema succinifaciens DSM 2489]
gi|328449214|gb|AEB14930.1| protein of unknown function DUF610 YibQ [Treponema succinifaciens
DSM 2489]
Length = 389
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/373 (16%), Positives = 139/373 (37%), Gaps = 12/373 (3%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
II LL I+ L + +S AFV + + ++ + L + +
Sbjct: 24 IILDNKRVLLLSALIIFL-CAVFLSMAFVFSSPKKEKQPKVQNVEQQVLRQEQKNKFAEK 82
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK-PTRSTSIDSLPTIEERLILGLSK 141
+N NQ KN + +Q + + + K P S + P + + +
Sbjct: 83 NKVAENK---NQPKNVQPEKKEAVQKPLEIQPEIKKVPVEKKSEEKKPQPVSKQEIKKDE 139
Query: 142 KELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA 201
++ + N ++ E+ + +GA + ++ G T + LP I +A
Sbjct: 140 PKIASVNPPAKKTEEIKVEKYSIPPAKNGATLVFIIDDGGYD-TYNLKLYTSLPFPIAVA 198
Query: 202 FASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSL 261
+ GQE +L PMQA + + + ++ ++ ++ ++
Sbjct: 199 VLPKLAHSKDCAAIVRNSGQELMLHQPMQAQNLK-LNPGAGAILPDMSLSEVYKQVSENI 257
Query: 262 RRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY 321
G+ N+ G+++ + + G+ F D +S + A + ++
Sbjct: 258 AEIGPIKGLNNHEGSLITCDVMKIGAVLDAVLDNGIFFVDSRTSAQTKAPQAALERDMKI 317
Query: 322 MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL----QQEHV 377
+ D+++DD + +D++ ++ IA G+ I + D+S +++ Q L
Sbjct: 318 LERDVFIDDIISKDEMLAQIYRGLGIANKNGKVIMIGHV-DKSAKILPQLLNDMYPYLKQ 376
Query: 378 RDVSVVPLSCLAK 390
+ + S + K
Sbjct: 377 KGYKIAFPSQIQK 389
>gi|218961345|ref|YP_001741120.1| hypothetical protein CLOAM1042 [Candidatus Cloacamonas
acidaminovorans]
gi|167730002|emb|CAO80914.1| hypothetical protein CLOAM1042 [Candidatus Cloacamonas
acidaminovorans]
Length = 357
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 89/224 (39%), Gaps = 2/224 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
I IVV G L + + + MK AK++G+ ++ IPM+
Sbjct: 131 ITIVVDDFGTIGGDLLTGFLALDKEVCFSIFPEEEYSVQTMKLAKEQGRLTLIHIPMEPI 190
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ V +Q+ + + + G N+ G++ +++E +
Sbjct: 191 GYPEVNPGKNPILVQYDERQIEKIMTRFIEQLPYCVGANNHMGSLATTDEEVMNSVMAIL 250
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-DQVDRDKIREKLKGLEEIARTT 351
K F D ++ ++ +A K +L DL+LD + + + KL + E++
Sbjct: 251 KKHNKFFLDSRTTNVSVAYSVAQKNHLKSYRNDLFLDSPNISQSTMDAKLNQIIELSNRN 310
Query: 352 GQAIGVAVAFD-ESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
I + + + ++ + +++ + +++PL+ + K + P
Sbjct: 311 QNVIAITHCHNYDKLDYLKRFINRLKAAGFTLIPLTDIDKYNVP 354
>gi|218962072|ref|YP_001741847.1| hypothetical protein CLOAM1809 [Candidatus Cloacamonas
acidaminovorans]
gi|167730729|emb|CAO81641.1| conserved hypothetical protein [Candidatus Cloacamonas
acidaminovorans]
Length = 262
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 101/255 (39%), Gaps = 8/255 (3%)
Query: 141 KKELLAKNKVGREDTEVPAMDKNFCSNASG-ARIAIVVSGLGISQTGTQRAINLLPANIT 199
+++ +K+ + T + + + +N + I++ G + + LP I
Sbjct: 5 EEKTESKSVSTPDMTAIESYKYTWSNNTDAMPPVVIIIDDFGQNAGQLLDDFSALPKEIA 64
Query: 200 LAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRY 259
+ + + A+K E ++ IPMQA D N ++ + + L+
Sbjct: 65 FSILPDLPYTQTVARLAEKTNHETLIHIPMQALDHQAN-PGKRYIRTGMDKYAISDLLQD 123
Query: 260 SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNL 319
+ N+ G+ + S+ + +I +E GL F D ++ ++ L L
Sbjct: 124 FYAQIPNAIAANNHMGSEVTSDLATMNIILEELDNLGLYFLDSATTNKSAAFTAGKNLGL 183
Query: 320 PYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQ---AIGVAVAFD-ESIEVISQWLQQE 375
D++LD + D + +E +A+ G+ + + + + + + ++L+Q
Sbjct: 184 KIAKRDIFLDVPDNSDATI--INKIEGLAKYKGRNEPVVIITHCHNRDKLNALQKFLKQI 241
Query: 376 HVRDVSVVPLSCLAK 390
+ ++ +S L +
Sbjct: 242 DNMGIELISVSQLFR 256
>gi|57242341|ref|ZP_00370280.1| probable periplasmic protein Cj0633 [Campylobacter upsaliensis
RM3195]
gi|57017021|gb|EAL53803.1| probable periplasmic protein Cj0633 [Campylobacter upsaliensis
RM3195]
Length = 356
Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 94/223 (42%), Gaps = 8/223 (3%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
++ I++ + + + + L + +F ++L + K+ + ++ +
Sbjct: 142 GQKPKLVIIIDDMANKEQVKE--LKALHLKLNPSFFP-SHTLHPNTPKLAKEFEFYMVHL 198
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P++A L + +++ + + N+ G++ S++E+
Sbjct: 199 PLKALSFQNK---MSVLSPEDSEEEIEKTIAKIKGEFKNLKFINNHTGSLFTSDEEAMRK 255
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
++K K L F D + + +A ++ Y+ D++LD++ D D ++ +L +
Sbjct: 256 LYKALDKHHLTFVDSKTIHHSKAPKIAKEMRKIYIKRDVFLDNEDDVDYVKNQLLNAVNL 315
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A+ G AI + + + + + +E ++ V +V LS L +
Sbjct: 316 AQKRGYAIAIGHPKKNTFKALKE--SKELLKSVDLVYLSELYE 356
>gi|237752167|ref|ZP_04582647.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376409|gb|EEO26500.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 359
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 100/280 (35%), Gaps = 20/280 (7%)
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
++ R K+ + +++ P +D NFC + ++AI++ +
Sbjct: 87 PNSPQGLNQNSTPRKTTPHEAKQTIQESQRQELLAPSPKLDSNFCVR-NKPQLAIIIDDV 145
Query: 181 GISQTGTQRAINLLPANITLAFASNG---NSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
S +AI +P +T + + K A ++ +P++A +
Sbjct: 146 --SNFAQYQAIKEIPFKLTPSLFPKSKVNPDTPKIAKIAP----FYMIHLPLEALNFHQK 199
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
E L + ++ + + + N+ G+ N ES ++ + +
Sbjct: 200 EH--KWLFAGDSKDKMESYIAAIKHDFPNLSHINNHTGSKFTQNLESMSLLLETLNNHHI 257
Query: 298 LFFDDGSSPRNLTRVL-APKLNLPY-------MVADLYLDDQVDRDKIREKLKGLEEIAR 349
F D + T A + + + D++LD+ +D KI E+L +IA+
Sbjct: 258 NFIDSRTIATTKTNSAYAKSPYIAFNPCQQKPLERDVFLDNVLDIPKITEQLIQAVQIAK 317
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G AI + ++ + V +V ++ +
Sbjct: 318 QKGYAIAIGHPHKATLLTLKNATDYLQKSGVELVYINEII 357
>gi|332298458|ref|YP_004440380.1| protein of unknown function DUF610 YibQ [Treponema brennaborense
DSM 12168]
gi|332181561|gb|AEE17249.1| protein of unknown function DUF610 YibQ [Treponema brennaborense
DSM 12168]
Length = 355
Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 108/313 (34%), Gaps = 12/313 (3%)
Query: 71 LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPT 130
LT P ED + P + +Q IS + V + + + P
Sbjct: 42 LTAPPAAEDFRQPPAVSPSVPAPVTPQTPVSPSVSVQPPISVQPSVEQQPAKQTSPTEPV 101
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRA 190
L + KE + V E +P + A A + + G + Q
Sbjct: 102 SVPEPSLPIVPKEPV--PPVHPEFDLIP-------TAAPRAVLVFIFDDGGQNLDQLQPF 152
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+N LP +++A K + G+E +L PMQA + +
Sbjct: 153 LN-LPFPVSIAVMPELVHSVESAKRVRAAGKELLLHQPMQAKN-LAVNPGPGAIHPDMDR 210
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+ L +L++ G+ N+ G+++ + + + A G+ F D ++
Sbjct: 211 DAVRKLLHSNLQKIGPVAGMNNHEGSLITESVTQMDAVLDVCAAEGIFFLDSRTTADTQV 270
Query: 311 RVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA-FDESIEVIS 369
+A + D++LD+ DR I ++L IA G A+ + + +++
Sbjct: 271 PAVAAARGMKIWERDIFLDNTPDRRDILDQLYRGAAIANKKGYAVMIGHVWSPQLASILN 330
Query: 370 QWLQQEHVRDVSV 382
+ + +
Sbjct: 331 ELYPLLKKKGYTF 343
>gi|310779173|ref|YP_003967506.1| protein of unknown function DUF610 YibQ [Ilyobacter polytropus DSM
2926]
gi|309748496|gb|ADO83158.1| protein of unknown function DUF610 YibQ [Ilyobacter polytropus DSM
2926]
Length = 348
Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 108/292 (36%), Gaps = 8/292 (2%)
Query: 106 IQNDISGKTVVNKPTRSTSID--SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
++ +G + T + + + +K+++L ++ G + +
Sbjct: 58 VEIVKTGDVYKVDLEKGTEVGLIETEALRAESSIEGNKEKILYRDFHGEKKLVIELYYHA 117
Query: 164 F-----CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
+++I++ +G++ T T + ++ A ++ K+
Sbjct: 118 PIPIIPPEKVYSGKLSILIDDVGMN-TQTADIFGKIKKPVSFATIPFLPRSSEATEKLKE 176
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G + IL +PM ++S N L T +++ R ++ G N+ G+
Sbjct: 177 YGFQVILHMPMAGSNDSLNSRTEGILMPDMTREEIYKRFDKAIGDVGDMNGFNNHMGSRF 236
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
N + + + + + + D ++ + A +L +P +LD+ + I+
Sbjct: 237 TENAFLMKTLLRYAKNKEMFYIDSKTTSKTKGYSTAKELGIPTYYCSRFLDNSKKIEDIK 296
Query: 339 EKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+++K ++A+ G+ + + + + +V +V + + +
Sbjct: 297 KEIKAAVKMAKDNGKILVIGHYHKNMAVALKSMVDYIENENVELVYIKEVLE 348
>gi|254457290|ref|ZP_05070718.1| putative periplasmic protein [Campylobacterales bacterium GD 1]
gi|207086082|gb|EDZ63366.1| putative periplasmic protein [Campylobacterales bacterium GD 1]
Length = 334
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 100/238 (42%), Gaps = 7/238 (2%)
Query: 151 GREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLD 210
G A ++ +S ++AI++ + + AI L +T++F
Sbjct: 103 GTLPEPPEAPKRDVIRTSSKPKLAIIIDDVSVRSHV--NAIKSLGIPLTMSFLPPSKLRP 160
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
K A K+ ++ +PM+A + S E TL+++ + ++ R++ + +
Sbjct: 161 NSAKLADKEN-VYMVHLPMEAQNFSAEE--PMTLRISDSDFKISQRVKDIKKEFPRVSYI 217
Query: 271 MNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
N+ G+ SN+ + + + F D ++ + L L Y+ D++LD
Sbjct: 218 NNHTGSKFTSNELAMNRLIYALKSEDINFIDSRTTADTKAPTVMKNLGLNYVARDVFLDH 277
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
+D+ I ++K ++A+ G AI + ++ + + + +DV +V + L
Sbjct: 278 TMDKVSIIIQIKKAIQVAKLHGTAIAIGHPHANTLLALHESKKLF--KDVELVYIDRL 333
>gi|317485790|ref|ZP_07944655.1| divergent polysaccharide deacetylase [Bilophila wadsworthia 3_1_6]
gi|316922964|gb|EFV44185.1| divergent polysaccharide deacetylase [Bilophila wadsworthia 3_1_6]
Length = 516
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 63/309 (20%), Positives = 115/309 (37%), Gaps = 15/309 (4%)
Query: 88 NNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS------TSIDSLPTIEERLILGLSK 141
V + + +G + +G V P +SL T +R +L S
Sbjct: 183 PPVVQDPAQQAPRNENGNAPSAETGD--VKGPPEPVFRFLNALAESLDTWADRAVLTESP 240
Query: 142 KEL-LAKNKVGREDTEVPAMDKNFC---SNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
+L LA V + A F R+ IV++ LG + T ++ L
Sbjct: 241 GKLTLATKGVLTHEIWFEATTDAFPILPPTDKAPRLTIVMNELGGDKAVT-ASLLALKLP 299
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
IT + A + GQE ++ +PM+ + + + + + + +
Sbjct: 300 ITFSVLPFAKDAAATATAAHEAGQEVLVDMPMETMQSPFVKAGPGEITTKMSEEDMRILM 359
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
+L G N+ G+ L ++ + + A+ GL DD + ++ A +
Sbjct: 360 DDALGHVPYATGASNFMGSRLTTDTAATRRFCEILARSGLYVLDDVTHQESILYAEARRR 419
Query: 318 NLPYMVADLYLDDQV-DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEH 376
LP L L+D + LK EE AR G A+ +A + + +W Q+
Sbjct: 420 GLPAWRRALTLNDGPKTEGAVLADLKKAEETARAKGHAVVIATPAPHVLAALKRWSQE-R 478
Query: 377 VRDVSVVPL 385
+D+ +VPL
Sbjct: 479 DKDIRLVPL 487
>gi|165976247|ref|YP_001651840.1| hypothetical protein APJL_0838 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876348|gb|ABY69396.1| hypothetical protein APJL_0838 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 226
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 200 LAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRY 259
+A ++A ++ ++ ++ +PMQ + + +S L V + + + ++
Sbjct: 1 MAIIPVAPYATARAQKAYEQKRDVLIHLPMQPKN-RHQPIESGALMVGASKENVARLIQA 59
Query: 260 SLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNL 319
+ + G+ N+ G+ +++++ E + E +K+ L F D + P ++ +A +L +
Sbjct: 60 ARNQVPYAIGLNNHMGSGATADRQTMEHLMTELSKQQLFFLDSKTGP-SVAAKVARELGV 118
Query: 320 PYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRD 379
+ +L+LDD +++ + AR G AI + SIEV+ + L D
Sbjct: 119 NALERNLFLDDNDALHEVQNQFHLALHYARKHGSAILIGHPRKNSIEVLEKGLANLP-ED 177
Query: 380 VSVVPLSCLAK 390
+ +V + L +
Sbjct: 178 IQLVSMGSLWR 188
>gi|269792105|ref|YP_003317009.1| hypothetical protein Taci_0491 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099740|gb|ACZ18727.1| protein of unknown function DUF610 YibQ [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 325
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 55/289 (19%), Positives = 110/289 (38%), Gaps = 12/289 (4%)
Query: 102 HDGQIQNDISGKTVVNKPTR--STSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
G ++ +S +P + P E + G K + + + P
Sbjct: 31 MPGPLEKMVSADLTGEEPPAEAPGTPPEAPPSGEGRVEGTPKGD--EPQGHPKAGLKRPP 88
Query: 160 MDKNFCSNASG-ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
+++ G +AIVV +G + +R + L +T A + + A+
Sbjct: 89 VERPALPGGRGRPWLAIVVDDMGYDLSAARR-LAALRIPMTWAIIPGAPRASQVAEIARA 147
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G ++ +PMQA + + + V + + R+R + G GV N+RG+
Sbjct: 148 HGIPYLVHLPMQALSDP--DGGESVIHVGMDAKDMRARVRRAFDSLPGAVGVNNHRGSAA 205
Query: 279 LSNKESAEVIFKEFA--KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
S+ ++ K A + G F D +SPR++ R A + + + ++D R+
Sbjct: 206 TSDSKTMGDFVKVLAELRPGWFFLDSATSPRSVARKEALRRGIRSLRNGYFIDSVPGRE- 264
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPL 385
L + A +G A+ + ++E +S+ V +V L
Sbjct: 265 -DRALAAAVKGALKSGGAVAIGHPRPGTLEALSRLAAGRAELPVRLVAL 312
>gi|258542077|ref|YP_003187510.1| hypothetical protein APA01_09810 [Acetobacter pasteurianus IFO
3283-01]
gi|256633155|dbj|BAH99130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256636212|dbj|BAI02181.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256639267|dbj|BAI05229.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642321|dbj|BAI08276.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645376|dbj|BAI11324.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648431|dbj|BAI14372.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651484|dbj|BAI17418.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654475|dbj|BAI20402.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 363
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 61/313 (19%), Positives = 118/313 (37%), Gaps = 15/313 (4%)
Query: 84 SKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKE 143
+ + Q+ K + ++P + L+ +
Sbjct: 25 ATAAVALAIGLQVMGPPGLSIEGQDIDVSADSAAKQSSPAQRTTIPGPQADLLESKNGPG 84
Query: 144 LLAKNKVGREDTEVPAMDKNFCS---NASGARIAIVVSGLGISQTGTQRAINLLPANITL 200
KVG D P +A+++ G+ + T AIN LP ++L
Sbjct: 85 GFPLPKVGAHD-RTPKKVYAAPVVDVPPGTPMVALLIDGIDQTDDLTTEAINSLPGPVSL 143
Query: 201 AFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYS 260
+ + + M A++ E +L +P+Q + L + + QQ ++ L ++
Sbjct: 144 GISPYAANPEELMNAARQHRHETLLSLPIQDNATKNTDAGPKALGLLLSPQQNMDNLNWA 203
Query: 261 LRRGTGYFGVMNY---RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
L GY GV N + ES + + K +RGLL+ D ++P T +
Sbjct: 204 LSHLAGYVGVTNAFAGQNGGSFPQSESFKSLVKAIDQRGLLYLD--ATPGTQTEGASS-- 259
Query: 318 NLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA-FDESIEVISQWLQQEH 376
AD+ ++ D I +L L+++AR G+AIG+ ++ + WL
Sbjct: 260 ---TATADVVVNTDTDIVNIDIQLLKLQQLARQNGRAIGILGPLRPVAMACLRAWLPHLK 316
Query: 377 VRDVSVVPLSCLA 389
+++VP+S +
Sbjct: 317 DMGIALVPVSQIV 329
>gi|152992040|ref|YP_001357761.1| hypothetical protein SUN_0444 [Sulfurovum sp. NBC37-1]
gi|151423901|dbj|BAF71404.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 354
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 44/237 (18%), Positives = 97/237 (40%), Gaps = 6/237 (2%)
Query: 152 REDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDR 211
R V + + ++ I++ + S G + I L IT + + +
Sbjct: 120 RSKVPVSKENVVLAYRSKKPKLVIIIDDV--SNAGQLKRIKALNMPITPSIFPPSHLSMK 177
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
AK ++ +PM++ +N+ TLK + T Q+ R+R + +
Sbjct: 178 SHTLAKSLKH-YMIHLPMESGSRQFNKQ-YKTLKTSFTKSQMEARIREIRQLFPTARYIN 235
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
N+ G++ + ++ ++ K G +F D + R +A K Y+ D+++D+
Sbjct: 236 NHTGSVFTDDYKAMHTLYGIMKKEGFIFIDSRTIGTTKVRKIAYKYGDAYVARDIFIDNT 295
Query: 332 VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
I +LK +IA+ G AI + +++ ++ + +DV +V + +
Sbjct: 296 QSIPYIHNQLKKAVKIAKKKGYAIAIGHPHKVTMQALATV--GDIFKDVELVYIDQI 350
>gi|213852179|ref|ZP_03381711.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 165
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 3/152 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
++ +PM + E D TL+ + ++ +R ++ G+ N+ G+ + S+
Sbjct: 75 VLIHLPMAPLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSL 132
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLA 314
+ + + L F D + + A
Sbjct: 133 FGMQKVMQALEHYNLYFLDSMTIGNSQAMRAA 164
>gi|260655308|ref|ZP_05860796.1| divergent polysaccharide deacetylase family protein [Jonquetella
anthropi E3_33 E1]
gi|260629756|gb|EEX47950.1| divergent polysaccharide deacetylase family protein [Jonquetella
anthropi E3_33 E1]
Length = 308
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 65/300 (21%), Positives = 115/300 (38%), Gaps = 27/300 (9%)
Query: 94 QLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRE 153
L + Q ISG ++ +LP S + + + + GRE
Sbjct: 24 ALARPAPQKQPLPLLVISGGAEAPSGEAPQNLGTLP----------SPEPTIVEPEAGRE 73
Query: 154 DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN---ITLAFASNGNSLD 210
E + A +A+V+ G S T Q+ I L T A + ++
Sbjct: 74 PGER----------SGKALMALVIDDFGTSLTIAQQ-IASLGGPSRSFTWAIMPDCSASL 122
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGV 270
A K GQ I+ +PMQA + D Y + + +Q+ ++ GV
Sbjct: 123 SCAHLADKIGQPYIVHLPMQAIIDPAGHRD-YLIGTDSSPEQVRRQVERMRSLFPRALGV 181
Query: 271 MNYRGAMLLSNKESAEVIFKEFA-KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
N+RG+ S++ + E A + G F D +S +++ R K +P + ++D
Sbjct: 182 NNHRGSKATSSQNTMEAFGAAMADQTGWGFLDSRTSGKSVARSTVAKYGVPALANMAFID 241
Query: 330 DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
D D ++ + IAR+ G I + A ++ + +W+ + V VPL L
Sbjct: 242 GVSDLDYMKGQFAKALRIARSRGVGIAICHARTGTLPFL-RWVCSQQFGGVQFVPLHQLW 300
>gi|218509896|ref|ZP_03507774.1| hypothetical protein RetlB5_21730 [Rhizobium etli Brasil 5]
Length = 234
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 29 LFLLFCTF-IVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRD 87
+ C F I G S+Y AF G E + A L+ P
Sbjct: 7 IAASLCLFAIGGFSLYT----AFRGEGLERAKPPATEQAASQTLSKPPTATA-------- 54
Query: 88 NNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKPTRSTSIDSLPTIEERLILGLSKKE--- 143
+ N + + ++ I+G +VV K + S P + + + +G +
Sbjct: 55 -DQAANGMPRADPRSGANVEQMITGDGSVVTKYSPHPRDGSGPVLVDAMQIGQDPRMAAQ 113
Query: 144 ----LLAKNKVGREDTEVP----AMDK--NFCSNASGARIAIVVSGLGISQTGTQRAINL 193
LL GR P MD+ S A G RIAIVVSGLG+SQTGTQRAI
Sbjct: 114 PNEALLEDTAFGRLPIVGPDGRRPMDQYARPSSGARGIRIAIVVSGLGLSQTGTQRAIAE 173
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL ++ V +
Sbjct: 174 LPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTSKPVARN 233
Query: 254 L 254
+
Sbjct: 234 I 234
>gi|320535663|ref|ZP_08035755.1| divergent polysaccharide deacetylase [Treponema phagedenis F0421]
gi|320147491|gb|EFW39015.1| divergent polysaccharide deacetylase [Treponema phagedenis F0421]
Length = 455
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/341 (14%), Positives = 122/341 (35%), Gaps = 15/341 (4%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
S P + + P + + + T +++K + + +
Sbjct: 106 AESSFAPKVKPEKTPCLEKNKPPAQKTETIAHAQKQKTAQSEVKPA-PHAEEKKIKNSEP 164
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD----------K 162
V K R+ + + ++ + +++ + + K+ + PA K
Sbjct: 165 AVKVIK-ERTAAQNEKKPVQPAQVKKQEQQKPVQEKKLEKPKPVQPAKKEPVAVAARPEK 223
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ V G + Q + LP T+A + + G+E
Sbjct: 224 PPVPKPHKGTLIFVFDDAGHNLAQLQYFLR-LPFPCTIAVLPRLAHSAEAARRIRAAGKE 282
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
IL PMQA + +K T Q+ L ++ G+ N+ G+++ +++
Sbjct: 283 CILHQPMQAIN-PNVNPGQGAIKPGMTAAQIREILNKNIEELWPIAGMNNHEGSLITADE 341
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLK 342
+ + + A++ + F D ++ + +A + N+ +++D+ +R + ++K
Sbjct: 342 NAMQAVLDTVAEKHIYFLDSRTNVHTVVPRIAKERNMVIWERSVFIDNDKNRKAMENEIK 401
Query: 343 GLEEIARTTGQAIGVAVAFDESI-EVISQWLQQEHVRDVSV 382
+IA G +I + F + E++++ S+
Sbjct: 402 KGLKIAEQRGCSIMIGHVFTVELAELLTEMYPTLVEEGYSL 442
>gi|329890925|ref|ZP_08269268.1| divergent polysaccharide deacetylase family protein [Brevundimonas
diminuta ATCC 11568]
gi|328846226|gb|EGF95790.1| divergent polysaccharide deacetylase family protein [Brevundimonas
diminuta ATCC 11568]
Length = 173
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
A+ G E ++++PM+ N+ YTL + + +L + L R TGYFGV NY
Sbjct: 1 MARAHGHEVMIELPMEPTGYPDNDPGPYTLLSSGGADDVAVKLDWLLARATGYFGVTNYL 60
Query: 275 GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDR 334
G ++ E + +RGL F DDGS R AD +D++
Sbjct: 61 GDRFATSDEGVSALMTNLRQRGLAFLDDGSMRR-------RPGAFARASADRVVDEEQTP 113
Query: 335 DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I + LE A+T G A+G ++ ++E ++W R + + P S + +
Sbjct: 114 AAILRQFNALEAAAKTNGAALGTGFSYPITVEAAARWTAGLEARGLQLAPASAMTRRP 171
>gi|291279748|ref|YP_003496583.1| hypothetical protein DEFDS_1366 [Deferribacter desulfuricans SSM1]
gi|290754450|dbj|BAI80827.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 357
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 173 IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF 232
+AI++ G + ++ + +P IT + + + A+K + L +PMQ
Sbjct: 141 LAIIIDDCGNNLKLAKK-LANIPYPITFSIIPHLKYSKETAEIARKFNKPVFLHLPMQPK 199
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
+ + + + ++ ++ G N+ G+ L ++E + E
Sbjct: 200 SYPSTDPGMGAIYLNTPKSLIKIIIKKNVESIGKIDGANNHMGSALTESREKMFEVLNEL 259
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
+F D +S + + + KLN+ + + ++D+ D++ I+E L + +
Sbjct: 260 KNYTDIFVDSHTSSKTVAYNVCKKLNMRCGLNNKFIDNIDDKNSIKEILYKSLSLFQKQD 319
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
+ I + + +IEV+S+ L + +++ +
Sbjct: 320 KVIIIGHLKENTIEVLSEELPKISKKNIKI 349
>gi|330980647|gb|EGH78750.1| hypothetical protein PSYAP_19071 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 155
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 65/137 (47%)
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRV 312
+ +RL +L + G+ N+ G+ + + + + E +R LLF +S + +
Sbjct: 1 MESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMAELQRRHLLFVASRTSAKTVAAA 60
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
A ++ L + D++LDD+ + I +L+ +IAR G A+ + + +++V+ + L
Sbjct: 61 EAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLEREL 120
Query: 373 QQEHVRDVSVVPLSCLA 389
+ V + L +
Sbjct: 121 PNLKAQGVEWIDLRSMI 137
>gi|300983577|ref|ZP_07176669.1| divergent polysaccharide deacetylase [Escherichia coli MS 200-1]
gi|300306901|gb|EFJ61421.1| divergent polysaccharide deacetylase [Escherichia coli MS 200-1]
Length = 168
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 3/148 (2%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + + +P+ I++A + +A G E +
Sbjct: 18 SSPVIAGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ +PM + E TL+ + ++ +R ++ G+ N+ G+ + SN
Sbjct: 77 IHLPMAPLSKQPLEK--NTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFG 134
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRV 312
+ + + + L F D +
Sbjct: 135 MQKVMQALERYNLYFLDSVTIGNTQASA 162
>gi|225619872|ref|YP_002721129.1| putative divergent polysaccharide deacetylase [Brachyspira
hyodysenteriae WA1]
gi|225214691|gb|ACN83425.1| putative divergent polysaccharide deacetylase [Brachyspira
hyodysenteriae WA1]
Length = 302
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 87/221 (39%), Gaps = 7/221 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINLLP-ANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
I+I++ G + + R L NIT A + + A IL IPM+
Sbjct: 86 ISIIIDDSGNTLDNSDRYFYLANEYNITFAVLPDSYHSTDFSYAAYSNNVNIILHIPMEG 145
Query: 232 FDESYNEDDSYTL-KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
D TL + ++ L YS + G+ N+ G++ S++ +
Sbjct: 146 SDY----FGEQTLIRKGMNEDEIFRLLDYSFSKVPYANGMNNHTGSVASSDESVVSYMLD 201
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
F D + +L +A + + ++LD++ D I ++ + L ++++
Sbjct: 202 YAKNNDKYFVDSYTVSDSLIYDMAIEYGVKTARRSVFLDNERDHSSIMKQWRELIKLSKE 261
Query: 351 TGQAIGVAV-AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G A+G+ +E+++++ L + V ++ +
Sbjct: 262 YGIAVGIGHYQSEETLKILEDNLPLLTDEGIISVSITEILN 302
>gi|153952202|ref|YP_001398408.1| putative periplasmic protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939648|gb|ABS44389.1| putative periplasmic protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P+ A D N+ + TL + +++ +++ + + N+ G++ SN+E
Sbjct: 44 LVHLPLAAIDY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEE 101
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ +++ + + F D + + +A +LN+PY+ D++LD++ D + ++++L+
Sbjct: 102 AMRKLYEALKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQLEN 161
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
++A+ G AI + + + + Q ++ ++ V +V LS +
Sbjct: 162 AVKLAQKKGFAIAIGYPRKNTFKALEQ--SKDLLKGVELVYLSEI 204
>gi|237750173|ref|ZP_04580653.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229374360|gb|EEO24751.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 396
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/345 (12%), Positives = 127/345 (36%), Gaps = 18/345 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ S+ + + I E PI + + K N+S+ QI ++
Sbjct: 44 PLSLDSQTMQHLQINEAPPIHIQTHIESTTASKNPKDSKQLDSASFNNESNHISAQIDSN 103
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ ++ D P + + + N + D KN
Sbjct: 104 NCHFEYSKQSNTNSKNDISPVTSNKEYITHPCRNDKFPNSIKNSDKTTTTYTKNPQRFYK 163
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFAS------NGNSLDRWMKEAKKKGQEA 223
++ I++ L + + L +TL+ N + + ++
Sbjct: 164 KPKVVIIIDDL--ANKKDIKNFQSLHLKLTLSLFPKQFFSKNNPDIAKTLE-------FY 214
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +P++A + L++ ++Q + + + + + N+ G+ ++E
Sbjct: 215 MIHLPLEAHNFEQQ--GVINLRIGDSLQTIESHIAQIKKDFPKLAYINNHTGSRYTESRE 272
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
+ + + A+ + F D ++ +++ L + + ++ +++LD++ + I ++L
Sbjct: 273 DMQKLLQVLARHKISFVDSLTTSKSVAGKLLKEQHKIHIARNVFLDNETNIASITKQLNT 332
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
IA G I + + +V+ ++ ++ + D ++ ++ L
Sbjct: 333 ALRIADKQGYVIAIGHPKQATYQVLKEY-KEILLNDYEMLYINEL 376
>gi|296127488|ref|YP_003634740.1| hypothetical protein Bmur_2471 [Brachyspira murdochii DSM 12563]
gi|296019304|gb|ADG72541.1| protein of unknown function DUF610 YibQ [Brachyspira murdochii DSM
12563]
Length = 302
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 7/220 (3%)
Query: 173 IAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
I+I++ G + T+R L IT A + + A + IL +PM+
Sbjct: 82 ISIIIDDSGNTLDYTERYFKLAYEYGITFAVLPDSPHSIDFSYAAYSNDVDVILHMPMEG 141
Query: 232 FDESYNEDDSYTL-KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
D T+ + ++ N L YS + G+ N+ G++ + +
Sbjct: 142 SDY----FGEKTIIRTGMNKDEVFNLLDYSFSKVPYANGMNNHTGSLACKDINIVSYMID 197
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
F D +S +L LA + N+ +++LD+ D D I ++ + L ++++
Sbjct: 198 YAKNNNKYFVDSYTSAESLIYDLALENNVRTAKRNVFLDNDRDYDSIMKQWRELIKLSKE 257
Query: 351 TGQAIGVAV-AFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G AIG+ +E+++V+ + + ++ V ++ +
Sbjct: 258 YGIAIGIGHYQSEETLKVLENNMPLLYEYNILSVNITEVL 297
>gi|32266725|ref|NP_860757.1| hypothetical protein HH1226 [Helicobacter hepaticus ATCC 51449]
gi|32262776|gb|AAP77823.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 289
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 85/212 (40%), Gaps = 7/212 (3%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFAS---NGNSLDRWMKEAKKK 219
+ +A+ ++ +++ L S + + L NIT + + S + K
Sbjct: 48 SMPQSAAKPKVLLIMDDL--STLAQIKHLEYLKLNITPSIFPKTKHNPSTPHLAELVLKN 105
Query: 220 GQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLL 279
G+ ++ +P++A E + +KV + + + + + N+ G+
Sbjct: 106 GKSFMIHLPLEAQHFIQKELEP--IKVGASRESIKQDILAIKNDFPQLVYLNNHTGSKFT 163
Query: 280 SNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIRE 339
+K + F + GL F D ++ + +A + M D++LD+Q D +
Sbjct: 164 QSKADMTNLLSVFDELGLKFIDSVTTSYPASESIAREQKRLIMARDIFLDNQSDVAYTKA 223
Query: 340 KLKGLEEIARTTGQAIGVAVAFDESIEVISQW 371
+LK L + A+ G AI + + ++Q
Sbjct: 224 QLKSLIKKAQKKGYAIAICHPHSTTFRALAQM 255
>gi|15595115|ref|NP_212904.1| hypothetical protein BB0770 [Borrelia burgdorferi B31]
gi|218249494|ref|YP_002375268.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi ZS7]
gi|226321469|ref|ZP_03796996.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi Bol26]
gi|2688701|gb|AAC67110.1| conserved hypothetical protein [Borrelia burgdorferi B31]
gi|218164682|gb|ACK74743.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi ZS7]
gi|226233265|gb|EEH32017.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi Bol26]
Length = 293
Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L IT A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ + +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPDLNQE 278
>gi|216264608|ref|ZP_03436600.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi 156a]
gi|215981081|gb|EEC21888.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
burgdorferi 156a]
Length = 293
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L IT A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDIFLDSKDTEESVTKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ + +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPDLNQE 278
>gi|312148129|gb|ADQ30788.1| divergent polysaccharide deacetylase superfamily [Borrelia
burgdorferi JD1]
Length = 293
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L IT A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHKNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ + +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPNLNQE 278
>gi|224533310|ref|ZP_03673904.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi CA-11.2a]
gi|224513475|gb|EEF83832.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi CA-11.2a]
Length = 293
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L IT A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ + +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPNLNQE 278
>gi|221217888|ref|ZP_03589355.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 72a]
gi|224532631|ref|ZP_03673253.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi WI91-23]
gi|225548835|ref|ZP_03769812.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 94a]
gi|225549946|ref|ZP_03770907.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 118a]
gi|221192194|gb|EEE18414.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 72a]
gi|224512487|gb|EEF82866.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi WI91-23]
gi|225369405|gb|EEG98857.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 118a]
gi|225370438|gb|EEG99874.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 94a]
Length = 293
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L IT A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ + +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPNLNQE 278
>gi|312149619|gb|ADQ29690.1| divergent polysaccharide deacetylase superfamily [Borrelia
burgdorferi N40]
Length = 293
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + +++ +G + ++ I L IT A K K + I
Sbjct: 67 QKAKSKPKFYLIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKRLKNANKTVI 125
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+
Sbjct: 126 IHFPMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDL 183
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
++I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+
Sbjct: 184 MKIILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKA 243
Query: 345 EEIARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
+ IAR G + +++V+ + +
Sbjct: 244 KNIARKNGMVKVIGHIWSKNTLKVLKKEGPNLNQE 278
>gi|303328258|ref|ZP_07358696.1| polysaccharide deacetylase family protein [Desulfovibrio sp.
3_1_syn3]
gi|302861588|gb|EFL84524.1| polysaccharide deacetylase family protein [Desulfovibrio sp.
3_1_syn3]
Length = 440
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 57/331 (17%), Positives = 115/331 (34%), Gaps = 13/331 (3%)
Query: 68 PIPLTIPLNI-EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
+PL +PL + ++ D + + ++ + K +
Sbjct: 97 TLPLALPLARWQREEGLPLEDEGSAARAYRVTGPCAPLRLGVALLEKLRSAADPDFPHLS 156
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEV--PAMDKNFCSNAS---GARIAIVVSGLG 181
++ R L + + L GR P ++ A A + +V+ LG
Sbjct: 157 AVDPERFRPRLAWTDQGALEIRLNGRPTHRFHFPGKERALADLARPLPQAALILVIDDLG 216
Query: 182 ISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAF---DESYNE 238
S + + LP + LA + A + G + ++ +PM+ D +
Sbjct: 217 QSLEPAED-LAALPFPVVLAVWPHAPRAGATADLAGQMGLDCLVHLPMEPQPRADGFRPK 275
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLL 298
L + L + L L G+ N+ G+ + + ++ + A RG
Sbjct: 276 PGPGALFADMSRHALASVLEPDLAALPTALGLNNHMGSRFTGSSAACRLLCAQLAGRGFF 335
Query: 299 FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVA 358
D + P + A L + ++LD + D + L AR+ G A+ +
Sbjct: 336 VLDSLTQPHSRLAEEARAAGLVSVARAVFLDTRRDVSAVLAALDAAAAKARSAGFAVAIG 395
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ E++ + +W + V+VVPL L
Sbjct: 396 HPYAETLSALRRW---QDKAGVAVVPLRRLV 423
>gi|223889391|ref|ZP_03623977.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 64b]
gi|223885077|gb|EEF56181.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 64b]
Length = 293
Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+++ +G + ++ I L IT A K+ K + I+ PMQ +
Sbjct: 77 LIIDDVGYDEFMLEQFI-KLNLKITYAIIPFLPKSMSLYKKLKNANKTVIIHFPMQ--SK 133
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++I ++ +
Sbjct: 134 HRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKIILEKLKE 193
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
FFD + ++ ++ ++ + D++LD + + + ++L+ + IAR G
Sbjct: 194 IDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNIARKNGMV 253
Query: 355 IGVAVA-FDESIEVISQWLQQEHVR 378
+ +++V+ + +
Sbjct: 254 KVIGHIWSKNTLKVLKKEGPDLNQE 278
>gi|213023020|ref|ZP_03337467.1| hypothetical protein Salmonelentericaenterica_10610 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 133
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
++AIV+ G + T+ + LP NI++A N +A G E ++ +PM
Sbjct: 7 AGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHEVLIHLPM 65
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
+ E D TL+ + ++ +R ++ G+ N+ G+ + S+ + +
Sbjct: 66 APLSKQPLEKD--TLRPDMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMQKVM 123
Query: 290 KEFAKRGLLF 299
+ L F
Sbjct: 124 QALEHYNLYF 133
>gi|195941590|ref|ZP_03086972.1| hypothetical protein Bbur8_01736 [Borrelia burgdorferi 80a]
Length = 293
Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 90/212 (42%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L I A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKINYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDLMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ + +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPDLNQE 278
>gi|226320641|ref|ZP_03796200.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 29805]
gi|226233964|gb|EEH32686.1| divergent polysaccharide deacetylase family protein [Borrelia
burgdorferi 29805]
Length = 293
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 89/215 (41%), Gaps = 4/215 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S + +++ +G + ++ I L I A K K + I
Sbjct: 67 QKAKSKPKFYLIIDDVGYDEFMLEQFI-KLNLKINYAIIPFLPKSMSLYKRLKNANKTVI 125
Query: 225 LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKES 284
+ PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+
Sbjct: 126 IHFPMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDAKIMNNHMGSLITSNKDL 183
Query: 285 AEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
++I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+
Sbjct: 184 MKIILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVTKELEKA 243
Query: 345 EEIARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
+ IAR G + +++V+ + +
Sbjct: 244 KNIARKNGMVKVIGHIWSKNTLKVLKKEGPDLNQE 278
>gi|330954793|gb|EGH55053.1| hypothetical protein PSYCIT7_26251 [Pseudomonas syringae Cit 7]
Length = 135
Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 55/117 (47%)
Query: 273 YRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQV 332
+ G+ + + + + E +R L F D +S + + A ++ L + D++LDD+
Sbjct: 1 HMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDER 60
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ I +L+ +IAR G A+ + + +++V+ + L + V + L +
Sbjct: 61 TAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRSMI 117
>gi|148259913|ref|YP_001234040.1| protein of unknown function DUF610, YibQ [Acidiphilium cryptum
JF-5]
gi|146401594|gb|ABQ30121.1| protein of unknown function DUF610, YibQ [Acidiphilium cryptum
JF-5]
Length = 327
Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats.
Identities = 62/284 (21%), Positives = 110/284 (38%), Gaps = 15/284 (5%)
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDTEVPAMDKNFCSNASGARI 173
P S ++P L++ G A +
Sbjct: 48 TGPVLHRSGSAIPPPNPALLVASKANPAWKIPHPAPDGMTPMRYYAAAAPVPVPQGLHPV 107
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
A+++ G+G ++ ++ AI LP ++LA G L + A+ G E ++ IPMQ
Sbjct: 108 AVMMGGIGEARQASRDAIRSLPPAVSLALTPYGPHLRSVVAAARAAGHETLMGIPMQTDR 167
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM----LLSNKESAEVIF 289
E + L+ ++ L L ++L R GY GV + G L+ + +
Sbjct: 168 EPAITEGDEALRGSELDPVNLKHLDWALSRSAGYVGVTDEIGMSVDETYLTQLLNRHWLG 227
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
K+ GLL ++ +P VAD+ + ++ D+ R LK L A
Sbjct: 228 KQLRPTGLLLV-------TASQGSGVPSGVPGRVADVVIHPEMSVDEQRAALKRLAATAV 280
Query: 350 TTGQAIG-VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+G A+G ++ + I V++QW Q + +VP+S L
Sbjct: 281 ASGSALGVISSPTADDIAVLAQWCQGLKADGLVLVPVSALVAAR 324
>gi|225551830|ref|ZP_03772773.1| divergent polysaccharide deacetylase family protein [Borrelia sp.
SV1]
gi|225371625|gb|EEH01052.1| divergent polysaccharide deacetylase family protein [Borrelia sp.
SV1]
Length = 293
Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 89/212 (41%), Gaps = 4/212 (1%)
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
S + +++ +G + ++ I L I A K+ K + I+
Sbjct: 70 KSKPKFYLIIDDVGYDEFMLEQFI-KLNLKINYAIIPFLPKSMSLYKKLKNANKTVIIHF 128
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
PMQ + N + + + + +++ ++ + ++ + N+ G+++ SNK+ ++
Sbjct: 129 PMQ--SKHRNSIEKFHINIKDKKEEIHKKIEKAFKKYPDSKIMNNHMGSLITSNKDFMKI 186
Query: 288 IFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEI 347
I ++ + FFD + ++ ++ ++ + D++LD + + + ++L+ + I
Sbjct: 187 ILEKLKEIDRYFFDSVTIAGSVPEIIGKEIGVKVEKRDVFLDSKDTEESVIKELEKAKNI 246
Query: 348 ARTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
AR G + +++V+ +
Sbjct: 247 ARKNGMVKVIGHIWSKNTLKVLKKEGPDLTQE 278
>gi|326403133|ref|YP_004283214.1| hypothetical protein ACMV_09850 [Acidiphilium multivorum AIU301]
gi|325049994|dbj|BAJ80332.1| hypothetical protein ACMV_09850 [Acidiphilium multivorum AIU301]
Length = 321
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 112/287 (39%), Gaps = 15/287 (5%)
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDTEVPAMDKNFCSNASG 170
++ P S ++P L++ G A
Sbjct: 39 AMLTGPVLHRSGSAIPPPNPALLVASKANPAWKIPHPAPDGMTPMRYYAAAAPVPVPQGL 98
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+A+++ G+G ++ ++ AI LP ++LA G L + A+ G E ++ IPMQ
Sbjct: 99 HPVAVMMGGIGEARQASRDAIRSLPPAVSLALTPYGPHLRSVVAAARAAGHETLMGIPMQ 158
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM----LLSNKESAE 286
E + L+ ++ L L ++L R GY GV + G L+ +
Sbjct: 159 TDREPAITEGDEALRGSELDPVNLKHLDWALSRSAGYVGVTDEIGMSVDETYLTQLLNRH 218
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+ K+ GLL ++ +P VAD+ + ++ D+ R LK L
Sbjct: 219 WLGKQLRPTGLLLV-------TASQGSGVPSGVPGRVADVVIHPEMSVDEQRAALKRLAA 271
Query: 347 IARTTGQAIG-VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
A +G A+G ++ + I V++QW Q + +VP+S L
Sbjct: 272 TAVASGSALGVISSPTADDIAVLAQWCQGLKADGLVLVPVSALVAAR 318
>gi|219685601|ref|ZP_03540417.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii Far04]
gi|219672879|gb|EED29902.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii Far04]
Length = 292
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L I A K+ K + I+ PM
Sbjct: 71 KPKFYLIIDDVGYDEFMLEQFI-KLNFEINYAIIPFLPKSMNLYKKLKNNNKTIIIHFPM 129
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q + N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 130 Q--SKHRNSIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIIL 187
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ ++ ++ + D++LD++ + + ++L+ + IAR
Sbjct: 188 IKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDNKDTEESVLKELEKAKNIAR 247
Query: 350 TTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 248 KHGIVKVIGHIWSKSTLKVLKKEEPNLNQE 277
>gi|218658574|ref|ZP_03514504.1| hypothetical protein RetlI_02356 [Rhizobium etli IE4771]
Length = 170
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 139 LSKKELLAKNKVGREDTEVP----AMDK--NFCSNASGARIAIVVSGLGISQTGTQRAIN 192
+ LL GR P MD+ S A G RIAIVVSGLG+SQTGTQRAI
Sbjct: 1 QPNEALLEDTAFGRLPIIGPDGRRPMDQYARPSSGARGIRIAIVVSGLGLSQTGTQRAIT 60
Query: 193 LLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQ 252
LP ITLAFA++GNSL RWM+EA++ G E +LQ+P++ FD N+ TL ++ V +
Sbjct: 61 ELPEEITLAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDPGPETLLTSKPVAR 120
Query: 253 LLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+ L ++ T Y G+MNY G LS+
Sbjct: 121 NIENLHKAMGEITNYTGIMNYLGGRFLSDPR 151
>gi|51599020|ref|YP_073208.1| hypothetical protein BG0793 [Borrelia garinii PBi]
gi|51573591|gb|AAU07616.1| conserved hypothetical protein [Borrelia garinii PBi]
Length = 288
Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L I A K+ K + I+ PM
Sbjct: 67 KPKFYLIIDDVGYDEFMLEQFI-KLNFEINYAIIPFLPKSMNLYKKLKNNNKTIIIHFPM 125
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q + N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 126 Q--SKHRNSIEKFHINIKDKKEEIYKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIIL 183
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ ++ ++ + D++LD++ + + ++L+ + IAR
Sbjct: 184 IKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDNKDTEESVLKELEKAKNIAR 243
Query: 350 TTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 244 KHGIVKVIGHIWSKSTLKVLEKEGPNLNQE 273
>gi|219684182|ref|ZP_03539126.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii PBr]
gi|219672171|gb|EED29224.1| divergent polysaccharide deacetylase family protein [Borrelia
garinii PBr]
Length = 292
Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L I A K+ K + I+ PM
Sbjct: 71 KPKFYLIIDDVGYDEFMLEQFI-KLNFEINYAIIPFLPKSMNLYKKLKNNNKTIIIHFPM 129
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q + N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 130 Q--SKHRNSIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIIL 187
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ ++ ++ + D++LD++ + + ++L+ + IAR
Sbjct: 188 IKLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDNKDTEESVLKELEKAKNIAR 247
Query: 350 TTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 248 KHGIVKVIGHIWSKSTLKVLEKEGPNLNQE 277
>gi|111115601|ref|YP_710219.1| hypothetical protein BAPKO_0818 [Borrelia afzelii PKo]
gi|110890875|gb|ABH02043.1| hypothetical protein BAPKO_0818 [Borrelia afzelii PKo]
Length = 293
Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+ +++ +G + ++ I L I A K+ K + I+ PMQ
Sbjct: 73 PKFYLIIDDVGYDEFMLEQFI-KLNLEINYAIIPFLPKSTSLYKKLKNNNKTVIIHFPMQ 131
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 132 --SKHRNAIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIILI 189
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ + FFD + ++ ++ ++ + D++LD + + + ++L+ + IAR
Sbjct: 190 KLKEIDRYFFDSVTIAGSIPEIIGKEIGVRVEKRDVFLDSKDTEEAVLKELEKAKNIARK 249
Query: 351 TGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 250 HGIVKVIGHIWSKNTLKVLEKEEPNLNQE 278
>gi|315931831|gb|EFV10786.1| Divergent polysaccharide deacetylase family protein [Campylobacter
jejuni subsp. jejuni 327]
Length = 325
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 168 ASGARIAIVVSGLGI-SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ ++AI++ + SQ +A+NL + +F + K A K ++
Sbjct: 144 SKKPKLAIIIDDMANASQVRGLKALNL---KLNPSFFPPDKNHSETPKLALK-FDFYMVH 199
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAE 286
+P+ A + N+ + TL + +++ +++ + + N+ G++ SN+E+
Sbjct: 200 LPLAAINY--NKPELDTLNPNDSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMR 257
Query: 287 VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
+++ + + F D + + +A +LN+PY+ D++LD++ D + ++++++ +
Sbjct: 258 KLYEVLKNQNIFFVDSKTIGNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQIQNAVK 317
Query: 347 IARTT 351
+A+
Sbjct: 318 LAQKK 322
>gi|224534597|ref|ZP_03675173.1| divergent polysaccharide deacetylase family protein [Borrelia
spielmanii A14S]
gi|224514274|gb|EEF84592.1| divergent polysaccharide deacetylase family protein [Borrelia
spielmanii A14S]
Length = 288
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 86/209 (41%), Gaps = 4/209 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+ +++ +G + ++ I L I A K+ K + I+ PMQ
Sbjct: 68 PKFYLIIDDVGYDEFMLEQFI-KLNLEINYAIIPFLPKSTSLYKKLKNNNKAVIIHFPMQ 126
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ N + + + + +++ ++ + + + N+ G+++ SNK+ +I
Sbjct: 127 --SKHRNAIEKFHINIKDKKEEIHKKIEKTFKMYPDVKIMNNHMGSLITSNKDLMRIILI 184
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ + FFD + ++ ++ ++ + D++LD + ++ + +L+ + IAR
Sbjct: 185 KLKEIDRYFFDSVTIAGSVPEIIGKEIGVRVEKRDVFLDSKDTKEAVLNELEKAKNIARK 244
Query: 351 TGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 245 HGIVKVIGHIWSKNTLKVLEKEGPSLNQE 273
>gi|329996912|ref|ZP_08302609.1| divergent polysaccharide deacetylase [Klebsiella sp. MS 92-3]
gi|328539202|gb|EGF65231.1| divergent polysaccharide deacetylase [Klebsiella sp. MS 92-3]
Length = 192
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD 333
G+ + SN + + + + L F D + A + + ++LDD +
Sbjct: 1 MGSAMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKGIKRKVFLDDTQN 60
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IR + +AR G AI + ++ V+ Q + D+++V S L
Sbjct: 61 EADIRNQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPP-DITLVRPSSLLN 116
>gi|289672249|ref|ZP_06493139.1| hypothetical protein PsyrpsF_03340 [Pseudomonas syringae pv.
syringae FF5]
Length = 159
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A A +++++ LG +Q R + LP +TLA + + ++A +
Sbjct: 19 AAPAENSGKPPKAYLSLIIDDLGQNQDRDSRTLA-LPGPVTLAIMPDTPHATEFARQAHR 77
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G+ +L +PM Y + +L +RL +L + G+ N+ G+ +
Sbjct: 78 AGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHMGSRM 131
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSP 306
+ + + E +R L F D +S
Sbjct: 132 TAEPVAMTWLMAELQRRHLFFVDSRTSA 159
>gi|216263687|ref|ZP_03435682.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
afzelii ACA-1]
gi|215980531|gb|EEC21352.1| divergent polysaccharide deacetylase superfamily protein [Borrelia
afzelii ACA-1]
Length = 293
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+ +++ +G + ++ I L I A K+ K + I+ PMQ
Sbjct: 73 PKFYLIIDDVGYDEFMLEQFI-KLNLEINYAIIPFLPKSTSLYKKLKNNNKTVIIHFPMQ 131
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
+ N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 132 --SKHRNAIEKFHINIKDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIILI 189
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIART 350
+ + FFD + ++ ++ ++ + D++LD + + + ++L+ + IAR
Sbjct: 190 KLKEIDRYFFDSVTIAGSIPEIIGKEIGVRVEKRDVFLDSKDTEEAVLKELEKAKNIARK 249
Query: 351 TGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 250 HGIVKVIGHIWSKNTLKVLEKEEHNLNQE 278
>gi|224531917|ref|ZP_03672549.1| divergent polysaccharide deacetylase family protein [Borrelia
valaisiana VS116]
gi|224511382|gb|EEF81788.1| divergent polysaccharide deacetylase family protein [Borrelia
valaisiana VS116]
Length = 295
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 85/210 (40%), Gaps = 4/210 (1%)
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPM 229
+ +++ +G + ++ I L I A K+ K + I+ PM
Sbjct: 74 KPKFYLIIDDVGYDEFMLEQFI-KLNLEINYAIIPFLPKSTILYKKLKNNNKTIIIHFPM 132
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
Q + N + + + + +++ ++ + + + N+ G+++ SNK+ ++I
Sbjct: 133 Q--SKHRNSIEKFHINIEDKKEEIHKKIEKTFKMYPDAKIMNNHMGSLITSNKDLMKIIL 190
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIAR 349
+ + FFD + ++ + ++ + D++LD + + ++L+ + IAR
Sbjct: 191 IKLKEIERYFFDSVTIAGSVPETVGKEIGVKVEKRDVFLDSKDTEKSVLKELEKAKNIAR 250
Query: 350 TTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
G + +++V+ + +
Sbjct: 251 KHGIVKVIGHIWSKNTLKVLEKEESNLNQE 280
>gi|218462232|ref|ZP_03502323.1| hypothetical protein RetlK5_23383 [Rhizobium etli Kim 5]
Length = 234
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 77/249 (30%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLG-LFLLFCTF-IVGLSIYILISHAFVGTISEMI 58
M DL+ PL + ++ + + RLG + C F I G S+Y AF G E
Sbjct: 1 MGTDLHAPLGRN--RKTASRRPGVLRLGRIAASLCLFAIGGFSLYT----AFRGDGLERA 54
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVN 117
+ A + P + + + + ++ I+G +VV
Sbjct: 55 KPPTAEQAA---------TQASGKPPTAAADQAADGMPRADPRSGANVEQMITGDGSVVT 105
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE-----------VPAMDK--NF 164
K + S P + + + +G + N+ EDT MD+
Sbjct: 106 KYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTAFGRLPIVGPDGRRPMDQYARP 165
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA-KKKGQEA 223
S A G RIAIVVSGLG+SQTGTQRAI LP ITLAFA++GNSL RWM+EA ++ +
Sbjct: 166 SSGARGIRIAIVVSGLGLSQTGTQRAIAELPEEITLAFAASGNSLQRWMQEAPPRRPRYF 225
Query: 224 ILQIPMQAF 232
LQ+P +A
Sbjct: 226 FLQVPARAI 234
>gi|312794212|ref|YP_004027135.1| hypothetical protein Calkr_2051 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181352|gb|ADQ41522.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 283
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 99/243 (40%), Gaps = 7/243 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P ++ + +AI+ G+ + Q+ +++ +P +I A ++
Sbjct: 41 PKPKTKEAASQVSSYVAIIFEDAGMDEEEVQKLLSINVPFDI--AIIPFLPFSNKISLMC 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+KG+E +L + M+ + S ++ ++ + +L G+ + G
Sbjct: 99 HEKGKEVMLHLSMEPEEGSTVWLCPRSIMNATPDDEIEKIFKDALANVANSKGLSIHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ N+ + + + L D S +L + ++ L ++ D+ +D + +
Sbjct: 159 LVCKNERIVKKLSTIAKENNLFIVDSTFSSESLFAKIGKQMGLQVVIPDIVVDSRNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I++K L IA+ G A+ + +IE Q +Q+ ++ V +S ++KL
Sbjct: 219 IQDKFNLLFNIAKKKGFAVAIGHLGLDGGITTIEAFKQAIQKAEKENIKFVFVSEISKLQ 278
Query: 393 SPS 395
+
Sbjct: 279 KEN 281
>gi|312878089|ref|ZP_07738024.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795131|gb|EFR11525.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
lactoaceticus 6A]
Length = 283
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 99/243 (40%), Gaps = 7/243 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P ++ + +AI+ G+ + Q+ +++ +P +I A ++
Sbjct: 41 PKPKIKEAASQVSSYVAIIFEDAGMDEEEVQKLLSINVPFDI--AIIPFLPFSNKISLMC 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+KG+E +L + M+ + S ++ ++ + +L G+ + G
Sbjct: 99 HEKGKEVMLHLSMEPEEGSTVWLCPRSIMNATPDDEIEKIFKDALANVANSKGLSIHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ N+ + + + L D S +L + ++ L ++ D+ +D + +
Sbjct: 159 LVCKNERIVKKLSTIAKENNLFMVDSTFSSESLFAKIGKQMGLQVVIPDIVVDSRNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I++K L IA+ G A+ + +IE Q +Q+ ++ V +S +++L
Sbjct: 219 IQDKFNLLFNIAKKKGFAVAIGHLGLDGGITTIEAFKQAIQKAEKENIKFVFVSEISRLQ 278
Query: 393 SPS 395
+
Sbjct: 279 KEN 281
>gi|312128686|ref|YP_003993560.1| hypothetical protein Calhy_2497 [Caldicellulosiruptor
hydrothermalis 108]
gi|311778705|gb|ADQ08191.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
hydrothermalis 108]
Length = 283
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P ++ + + +AI+ G+ + Q+ +++ +P +I A ++ +
Sbjct: 41 PKPKIKEAASQTLSYVAIIFEDAGMDEEEVQKLLSINVPFDI--AIIPFLPFSNKISLTS 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+KG+E IL + M+ +ES ++ ++ + +L G+ + G
Sbjct: 99 HEKGKEVILHLSMEPEEESTIWLCPRSIMNATPDDEIEKIFKDALANVANSKGLSIHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ N+ + + + L D S +L + ++ L ++ D+ LD + +
Sbjct: 159 LVCKNERIVKKLSTIAKENNLFIVDSTFSSESLFAKIGKQMGLQVVIPDIVLDSRNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I++K L IA+ G A+ + + +IE Q +Q+ ++ V +S + KL
Sbjct: 219 IQDKFNLLFNIAKKKGFAVAIGHLGTDGGITTIEAFKQAIQKAEKENIKFVFVSEILKLQ 278
Query: 393 SPS 395
+
Sbjct: 279 KEN 281
>gi|203288196|ref|YP_002223211.1| hypothetical protein BRE_777 [Borrelia recurrentis A1]
gi|201085416|gb|ACH94990.1| uncharacterized conserved protein [Borrelia recurrentis A1]
Length = 307
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 85/211 (40%), Gaps = 4/211 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S +++ +G + I + NI + + + + K + ++ P
Sbjct: 75 SKPEFYLIIDDVGYDEFMLDEFI-KINLNINFSIIPFLPKSMEFYNKLQNKNKIIMIHFP 133
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQ + N + + + + + ++ + + N+ G+++ SN+ +++
Sbjct: 134 MQ--SKHKNSIEKFHININDDEITIRTKIETTFNTYPNAKIMNNHMGSLITSNENIMKIM 191
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ ++ FFD ++ +++ + + D++LD++ + + + L+ ++IA
Sbjct: 192 LIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSVIKALERAKQIA 251
Query: 349 RTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
RT G + +++++ Q +
Sbjct: 252 RTKGIVKVIGHIWSKNTLKILQQESENLKKE 282
>gi|203284663|ref|YP_002222403.1| hypothetical protein BDU_774 [Borrelia duttonii Ly]
gi|201084106|gb|ACH93697.1| uncharacterized conserved protein [Borrelia duttonii Ly]
Length = 307
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 85/211 (40%), Gaps = 4/211 (1%)
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
S +++ +G + I + NI + + + + K + ++ P
Sbjct: 75 SKPEFYLIIDDVGYDEFMLDEFI-KINLNINFSIIPFLPKSMEFYNKLQNKNKIIMIHFP 133
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
MQ + N + + + + + ++ + + N+ G+++ SN+ +++
Sbjct: 134 MQ--SKHKNSIEKFHININDDEITIRTKIETTFNTYPNAKIMNNHMGSLITSNENIMKIM 191
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
+ ++ FFD ++ +++ + + D++LD++ + + + L+ ++IA
Sbjct: 192 LIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSVIKALERAKQIA 251
Query: 349 RTTGQAIGVAVA-FDESIEVISQWLQQEHVR 378
RT G + +++++ Q +
Sbjct: 252 RTKGIVKVIGHIWSKNTLKILQQESENLKKE 282
>gi|146295404|ref|YP_001179175.1| protein of unknown function DUF610, YibQ [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408980|gb|ABP65984.1| protein of unknown function DUF610, YibQ [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 282
Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 7/239 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P S S A +A++ G+ + Q+ + + LP ++ A ++
Sbjct: 41 PKPQAVETSAQSQAYVALIFEDAGMDEQEIQKLLEINLPFDV--AIIPFLPFSNKIALMC 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
K +E ++ + M+ D++ ++ ++ + ++ G + G
Sbjct: 99 SKNNKEVLMHLSMEPEDQNTVWLTPRSIMNNTPDDEVEKVFKDAMLNLPHSKGFSIHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ +N++ + ++ D SSPR+L + + + + D+ LD + +
Sbjct: 159 LVCTNEKIVSHLVNLAKANNMIIVDSTSSPRSLFPKIGKQKGIDVIPHDVILDSKNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCLAKL 391
I++K K L A+ G A+G+ E +IE + L+ ++ V +S +AKL
Sbjct: 219 IQDKFKLLFNKAKKKGFAVGIGHLGQEGGLTTIEAFKEVLKDAQRENIKFVFVSDIAKL 277
>gi|119953544|ref|YP_945754.1| cation transport ATPases [Borrelia turicatae 91E135]
gi|119862315|gb|AAX18083.1| cation transport ATPases [Borrelia turicatae 91E135]
Length = 303
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+++ +G + I + NI + + + K + ++ +PMQ +
Sbjct: 76 LIIDDVGYDEFMLDEFI-KIDLNINFSIIPFLPKSMDFYNKLASKNKIIMIHLPMQ--SK 132
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
N + + + + + ++ + + + + N+ G+++ +N+ ++I + +
Sbjct: 133 YKNSIEKFHININDNEFAIRTKIEKTFQTYSNAKIMNNHMGSLITANENIMQIILIKLKE 192
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
FFD ++ ++++ + K+ + D++LD++ + + + L+ ++IART G
Sbjct: 193 ENRYFFDSLTTQKSISAKIGKKIGIIVEQRDIFLDNKDNEKAVIKALERAKQIARTKGIV 252
Query: 355 IGVAVA-FDESIEVISQWLQQEHVR 378
+ +++++ Q +
Sbjct: 253 KVIGHIWSKNTLKILKQEAVNLNKE 277
>gi|312623465|ref|YP_004025078.1| hypothetical protein Calkro_2448 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203932|gb|ADQ47259.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
kronotskyensis 2002]
Length = 283
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P ++ + + +AI+ G+ + Q+ +++ +P +I A ++ +
Sbjct: 41 PKPKIKEAASQTLSYVAIIFEDAGMDEEEVQKLLSINVPFDI--AIIPFLPFSNKISLAS 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+KG+E IL + M+ D+ ++ + ++ + +L G+ + G
Sbjct: 99 YEKGKEVILHLSMEPEDQDTIWLCPRSIMNSTPDDEIEKIFKDALANVAYSKGLSIHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ N+ + + + L D S +L + ++ L ++ D+ LD + +
Sbjct: 159 LVCKNERIVKKLSAIAKENNLFIVDSTFSSESLFAKIGKQMGLQVVIPDIVLDSRNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAVAFDE----SIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I++K L IA+ G A+ + + +IE Q +Q+ ++ V +S + K
Sbjct: 219 IQDKFNLLFNIAKKKGFAVAIGHLGTDGGITTIEAFKQTIQKAEKENIKFVFVSEILKFQ 278
Query: 393 SPS 395
+
Sbjct: 279 KEN 281
>gi|108809471|ref|YP_653387.1| hypothetical protein YPA_3480 [Yersinia pestis Antiqua]
gi|108813948|ref|YP_649715.1| hypothetical protein YPN_3788 [Yersinia pestis Nepal516]
gi|145601083|ref|YP_001165159.1| hypothetical protein YPDSF_3843 [Yersinia pestis Pestoides F]
gi|229836175|ref|ZP_04456343.1| putative periplasmic protein [Yersinia pestis Pestoides A]
gi|229839911|ref|ZP_04460070.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229841993|ref|ZP_04462148.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904478|ref|ZP_04519589.1| putative periplasmic protein [Yersinia pestis Nepal516]
gi|270488477|ref|ZP_06205551.1| divergent polysaccharide deacetylase [Yersinia pestis KIM D27]
gi|294502167|ref|YP_003566229.1| hypothetical protein YPZ3_0057 [Yersinia pestis Z176003]
gi|108777596|gb|ABG20115.1| hypothetical protein YPN_3788 [Yersinia pestis Nepal516]
gi|108781384|gb|ABG15442.1| hypothetical protein YPA_3480 [Yersinia pestis Antiqua]
gi|145212779|gb|ABP42186.1| hypothetical protein YPDSF_3843 [Yersinia pestis Pestoides F]
gi|229678596|gb|EEO74701.1| putative periplasmic protein [Yersinia pestis Nepal516]
gi|229690303|gb|EEO82357.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696277|gb|EEO86324.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706623|gb|EEO92629.1| putative periplasmic protein [Yersinia pestis Pestoides A]
gi|262360246|gb|ACY56967.1| hypothetical protein YPD4_0058 [Yersinia pestis D106004]
gi|262364193|gb|ACY60750.1| hypothetical protein YPD8_0060 [Yersinia pestis D182038]
gi|270336981|gb|EFA47758.1| divergent polysaccharide deacetylase [Yersinia pestis KIM D27]
gi|294352626|gb|ADE62967.1| hypothetical protein YPZ3_0057 [Yersinia pestis Z176003]
Length = 145
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
S A +++IV+ G + I +P I++A N +A +G+E
Sbjct: 17 IASTAQAGKLSIVIDDFGYRPQNENK-ILQMPLPISVAILPNAPYAREMATKAHNQGREI 75
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
++ +PM + E D TL+ + + +++ +R + G+ N+ G+ + ++
Sbjct: 76 LIHLPMAPQSKQPLERD--TLQPSMSSEEIQRIIRQAANNVPYAKGMNNHMGSAMTASLP 133
Query: 284 SAEVIFKEF 292
+ + +
Sbjct: 134 GMQKVMQAL 142
>gi|187918622|ref|YP_001884187.1| cation transport ATPases [Borrelia hermsii DAH]
gi|119861470|gb|AAX17265.1| cation transport ATPases [Borrelia hermsii DAH]
Length = 297
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 85/205 (41%), Gaps = 4/205 (1%)
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+++ +G + + + NI + + + K + ++ PMQ +
Sbjct: 81 LIIDDVGYDEFMLDEFM-KIDLNINFSIIPFLPKSMDFYNKLTSKNKITMIHFPMQ--SK 137
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
N + + + + + ++ + + + + N+ G+++ SN++ ++I + +
Sbjct: 138 YKNSIEKFHININDNEFAIRKKIEKTFQTYSNAKIMNNHMGSLITSNEDIMQIILIKLKE 197
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
FFD ++ +++ + + D++LD++ + + + LK ++IART G
Sbjct: 198 ENRYFFDSLTTQESISEKTGKNIGILVEQRDIFLDNKDNEKAVIQALKRAKQIARTKGIV 257
Query: 355 IGVAVA-FDESIEVISQWLQQEHVR 378
+ +++++ Q +
Sbjct: 258 KVIGHIWSKNTLKILKQESENLKQE 282
>gi|237802213|ref|ZP_04590674.1| hypothetical protein POR16_25584 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025070|gb|EGI05126.1| hypothetical protein POR16_25584 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 130
Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 51/112 (45%)
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
+ + + + E +R L F D +S + + A ++ L + D++LDD+ + I
Sbjct: 1 MTAEPVAMAWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVFLDDERTAEAI 60
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+L+ E+A G + + + +++V+ + L + + V + L +
Sbjct: 61 TRQLQTAIELAHKQGSVVVIGHPYPVTLDVLERELPKLKAQGVEWIDLRSMI 112
>gi|195936178|ref|ZP_03081560.1| hypothetical protein EscherichcoliO157_06888 [Escherichia coli
O157:H7 str. EC4024]
Length = 194
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 276 AMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD 335
+ + SN + + + + L F D + A + + ++LDD +
Sbjct: 1 SKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEA 60
Query: 336 KIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
IR + ++AR G I + ++ V+ Q + D+++V S L
Sbjct: 61 DIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP-DITLVKASSLLN 114
>gi|222530356|ref|YP_002574238.1| hypothetical protein Athe_2397 [Caldicellulosiruptor bescii DSM
6725]
gi|222457203|gb|ACM61465.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
bescii DSM 6725]
Length = 283
Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 101/242 (41%), Gaps = 8/242 (3%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEAK 217
K S AS +AI+ G+ + Q+ +++ +P +I A ++ +
Sbjct: 43 PKIKEAASQASS-YVAIIFEDAGMDEEEVQKLLSINVPFDI--AIIPFLPFSNKISLMCQ 99
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
+KG+E +L + M+ + S ++ ++ + +L GV + G +
Sbjct: 100 EKGKEVLLHLSMEPEEGSTIWLCPRSIMNATPDDEVEKIFKDALANVANSKGVSTHLGTL 159
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKI 337
+ N+ + + ++ + D S +L + ++ L ++ D+ LD + + I
Sbjct: 160 VCKNERIVKKLCLLAKEKDMTVIDSTFSSESLFAKIGKQMGLQVIIPDIVLDSRNELKPI 219
Query: 338 REKLKGLEEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++K L +A+ G A+ + +IE Q +++ ++ V +S ++KL
Sbjct: 220 QDKFNLLFNMAKKKGFAVAIGHLGLDGGITTIEAFKQTVEKAKKENIKFVFVSEISKLEK 279
Query: 394 PS 395
+
Sbjct: 280 KN 281
>gi|302872758|ref|YP_003841394.1| hypothetical protein COB47_2162 [Caldicellulosiruptor obsidiansis
OB47]
gi|302575617|gb|ADL43408.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
obsidiansis OB47]
Length = 283
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 103/243 (42%), Gaps = 7/243 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P ++ + + +AI+ G+ + Q+ +++ +P +I A ++
Sbjct: 41 PKPKIKEAASQTSSFVAIIFEDAGMDEEEVQKLLSINVPFDI--AIIPFLPFSNKISLMC 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
++KG+E +L + M+ + S ++ ++ + +L GV + G
Sbjct: 99 QEKGKEVLLHLSMEPEEGSTIWLCPRSIMNATPDDEIEKIFKDALANVANSKGVSTHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ N+ + + ++ ++ D S +L + ++ L ++ D+ LD + +
Sbjct: 159 LVCKNERIVKKLCTLAKEKDMVLVDSTFSSESLFSKMGKQIGLQVIIPDIILDSRNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I++K L +A+ G ++ + +IE Q +++ ++ V +S ++KL
Sbjct: 219 IQDKFNILFNLAKKKGFSVAIGHLGVDGGITTIEAFKQAVEKAKKENIKFVFVSEISKLE 278
Query: 393 SPS 395
S
Sbjct: 279 KKS 281
>gi|312136102|ref|YP_004003440.1| hypothetical protein Calow_2131 [Caldicellulosiruptor owensensis
OL]
gi|311776153|gb|ADQ05640.1| protein of unknown function DUF610 YibQ [Caldicellulosiruptor
owensensis OL]
Length = 283
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 158 PAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL-LPANITLAFASNGNSLDRWMKEA 216
P + + + +AI+ G+ + Q+ +N+ +P +I A ++
Sbjct: 41 PKPKIKEAAIQASSYVAIIFEDAGMDEEEVQKLLNINVPFDI--AIIPFLPFSNKISLMC 98
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
++K +E +L + M+ D S ++ ++ +L T GV + G
Sbjct: 99 QEKEKEVLLHLSMEPEDSSTIWLCPRSIMNVTPDDEVEKIFNDALVNVTNSKGVSIHLGT 158
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++ N+ + + ++ ++ D S +L + ++ L ++ D+ LD + +
Sbjct: 159 LVCKNERIVKKLCTLAKEKDMVLIDSTFSAESLFSKMGKQIGLQVIIPDIILDSKNELKP 218
Query: 337 IREKLKGLEEIARTTGQAIGVAV----AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I++K L +A+ G A+ + +IE Q +++ ++ V +S ++KL
Sbjct: 219 IQDKFNILFNLAKKKGFAVAIGHLGVDGGITTIEAFKQAVEKAKKENIKFVFVSEISKLE 278
Query: 393 SPS 395
S
Sbjct: 279 KKS 281
>gi|304320591|ref|YP_003854234.1| hypothetical protein PB2503_05087 [Parvularcula bermudensis
HTCC2503]
gi|303299493|gb|ADM09092.1| hypothetical protein PB2503_05087 [Parvularcula bermudensis
HTCC2503]
Length = 388
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 72/351 (20%), Positives = 130/351 (37%), Gaps = 16/351 (4%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIED-----KQSPSKRDNNTVCNQLKNDSSQH 102
A +E P + I A + +
Sbjct: 46 EADRYAGAETGPGTEIEAGAEASALADGAETAGVRIIRGEAELPSPEVAAAGSGDGDGLA 105
Query: 103 DGQIQ--NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
+ T+V ++ + P + + + L + R T A
Sbjct: 106 TATESRGDGSVRITIVGGGDKAAARVPEPRHLDTSLT-VKTAAGLRPARNARGATPFAAY 164
Query: 161 DKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
+ + + +A++VSGLG+ T RA+ LPA I ++F++ ++D + A G
Sbjct: 165 RQAMPA-KTAPALAVMVSGLGLDPVTTDRALLALPAEIGVSFSAYARNVDARLSAALAAG 223
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
+EA L+IPM S L + + RL + L R Y V N+ G + S
Sbjct: 224 REAALEIPMATRGLSEAVLGPAALSPDRAAEGNATRLDWVLSRAPAYPYVTNFEGDLFAS 283
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK 340
N E+ + + GL + DD +A LNLPY DL L + + + ++
Sbjct: 284 NAEAMQAFLNALDRAGLGYLDD----TGKGGAIARALNLPYGEVDLVL--EPNDPEAADR 337
Query: 341 LKGLEEIARTTGQAIGVAV-AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
L+ + A + + + V V A D +++ + W+ +V +VP S +
Sbjct: 338 LRAVSRRALSAERPLIVKVYASDGNLDAVMAWVDTLQSGEVGLVPPSAAMR 388
>gi|46205339|ref|ZP_00048666.2| COG2861: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 261 LRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP 320
+ R G+ GV+N GA L++ + + + K+ A RGL F DDG+ PR+ A K LP
Sbjct: 1 MSRFPGFVGVVNAMGAKLMNEASALDPVLKDLAARGLGFVDDGTVPRSQLAGAAAKAKLP 60
Query: 321 YMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDV 380
A+ +D D I +L LE +AR G + A +I+ +S+W + R V
Sbjct: 61 SARAESVIDAVARPDAIDAELTRLETLARQKGFVLASGSASPMTIDRLSRWSRDLETRGV 120
Query: 381 SVVPLS 386
+VP+S
Sbjct: 121 RLVPVS 126
>gi|213025716|ref|ZP_03340163.1| hypothetical protein Salmonelentericaenterica_26088 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 158
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 293 AKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTG 352
L F D + + A + + ++LDD + IR + E+AR G
Sbjct: 1 EHYNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNG 60
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
AI + ++ V+ Q + + D+++V P S L + +S
Sbjct: 61 SAIAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 104
>gi|289806397|ref|ZP_06537026.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 176
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 295 RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA 354
L F D + + A + + ++LDD + IR + E+AR G A
Sbjct: 1 YNLYFLDSMTIGNSQAMRAASGTGVKVIKRKVFLDDTQNEADIRRQFNRTIELARRNGSA 60
Query: 355 IGVAVAFDESIEVISQWLQQEHVRDVSVV-PLSCLAKLSSPSS 396
I + ++ V+ Q + + D+++V P S L + +S
Sbjct: 61 IAIGHPHPATVRVLQQMVYRLPA-DITLVRPGSLLNEPQVDTS 102
>gi|261491697|ref|ZP_05988278.1| hypothetical protein COK_0131 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261312650|gb|EEY13772.1| hypothetical protein COK_0131 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 114
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 37/90 (41%)
Query: 242 YTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFD 301
+ + +++ + S + G+ N+ G+ S+ + + + K + L F D
Sbjct: 4 GGIHIGDNEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSATMQHLMKVLKENTLFFLD 63
Query: 302 DGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
+ ++ A + + + D++LDD
Sbjct: 64 SKTIGSSVAAKTARQFGINTLERDIFLDDS 93
>gi|58038808|ref|YP_190772.1| hypothetical protein GOX0333 [Gluconobacter oxydans 621H]
gi|58001222|gb|AAW60116.1| Hypothetical protein GOX0333 [Gluconobacter oxydans 621H]
Length = 266
Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 18/253 (7%)
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAF 202
P+ + IAIV+ G G S T ++ +PA + +
Sbjct: 1 MTQQALPPVVSSAASPSPQASAPLPTDKTAIAIVLQGFGYSDALTYDVLSRIPAPVAVGI 60
Query: 203 ASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLR 262
+ +++ + A +E + +PMQ+ ++ + L + L + L
Sbjct: 61 SPYVSNISDIIARAHASHREVYVTLPMQSAHPERVDEGPHALGYGNSAADDQRELEWCLS 120
Query: 263 RGTGYFGVMNYR-------GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAP 315
R G G+ + G ++ + I + +GLL+
Sbjct: 121 RAAGAEGLTDASENGDDQPGGGYATSPD-FSPIASAISSKGLLYL---------AGSAQD 170
Query: 316 KLNLPYMVADLYLDDQVDRDKIREKLKGLE-EIARTTGQAIGVAVAFDESIEVISQWLQQ 374
M A ++D D + +L L + + + V I+ ++ WL+
Sbjct: 171 GRRTRGMTATAWIDGDTDAATLDSRLAALLPQDGKPAKILLMVGPITPVMIDRLANWLKG 230
Query: 375 EHVRDVSVVPLSC 387
++ VVP S
Sbjct: 231 PAAQNFVVVPPSA 243
>gi|48243708|gb|AAT40823.1| hypothetical protein [Haemophilus influenzae]
Length = 127
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 300 FDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV 359
D + +++ +A + + + ++LDD + ++ + K AR G AI +
Sbjct: 1 LDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGH 60
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+I V+ L D+ +V + L +
Sbjct: 61 PRANTIAVLQAGLNNLP-EDIQLVGMGNLWR 90
>gi|237802214|ref|ZP_04590675.1| hypothetical protein POR16_25589 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025071|gb|EGI05127.1| hypothetical protein POR16_25589 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 127
Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
S A +++++ LG + R + LP +TLA + + ++ + G+ +L
Sbjct: 27 KPSKAYLSLIIDDLGQNADRDSRTLA-LPGPVTLAIMPDTPHATDFARQVHRAGKTVMLH 85
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYR 274
+PM Y + +L +RL +L + G+ N+
Sbjct: 86 MPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAGINNHM 127
>gi|108809472|ref|YP_653388.1| hypothetical protein YPA_3481 [Yersinia pestis Antiqua]
gi|108813949|ref|YP_649716.1| hypothetical protein YPN_3789 [Yersinia pestis Nepal516]
gi|145601084|ref|YP_001165160.1| hypothetical protein YPDSF_3844 [Yersinia pestis Pestoides F]
gi|229836174|ref|ZP_04456342.1| putative periplasmic protein [Yersinia pestis Pestoides A]
gi|229839910|ref|ZP_04460069.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229841992|ref|ZP_04462147.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904479|ref|ZP_04519590.1| putative periplasmic protein [Yersinia pestis Nepal516]
gi|270488478|ref|ZP_06205552.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294502166|ref|YP_003566228.1| hypothetical protein YPZ3_0056 [Yersinia pestis Z176003]
gi|108777597|gb|ABG20116.1| conserved hypothetical protein [Yersinia pestis Nepal516]
gi|108781385|gb|ABG15443.1| conserved hypothetical protein [Yersinia pestis Antiqua]
gi|145212780|gb|ABP42187.1| conserved hypothetical protein [Yersinia pestis Pestoides F]
gi|229678597|gb|EEO74702.1| putative periplasmic protein [Yersinia pestis Nepal516]
gi|229690302|gb|EEO82356.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696276|gb|EEO86323.1| putative periplasmic protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706622|gb|EEO92628.1| putative periplasmic protein [Yersinia pestis Pestoides A]
gi|262360245|gb|ACY56966.1| hypothetical protein YPD4_0057 [Yersinia pestis D106004]
gi|262364192|gb|ACY60749.1| hypothetical protein YPD8_0059 [Yersinia pestis D182038]
gi|270336982|gb|EFA47759.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294352625|gb|ADE62966.1| hypothetical protein YPZ3_0056 [Yersinia pestis Z176003]
Length = 166
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 322 MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVS 381
+ ++LDD + IR++ +AR G AI + +I+V+ Q L Q D+
Sbjct: 2 IKRKIFLDDSQNEAAIRQQFNRAVALARRNGSAIAIGHPHPATIKVLQQMLPQLPA-DIV 60
Query: 382 VVPLSCLAKLSSPS 395
+V S L S
Sbjct: 61 LVRPSALLNEPVQS 74
>gi|330954792|gb|EGH55052.1| hypothetical protein PSYCIT7_26246 [Pseudomonas syringae Cit 7]
Length = 122
Score = 92.8 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 155 TEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMK 214
A A +++++ LG + R + LP +TLA + + +
Sbjct: 15 GAAHAAPAESSGKPPKAYLSLIIDDLGQNPQRDSRTLA-LPGPVTLAIMPDTPHATEFAR 73
Query: 215 EAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFG 269
+A + G+ +L +PM Y + +L +RL +L + G
Sbjct: 74 QAHRAGKTVMLHMPMDPAT------GPYAWHPELPLPELESRLNAALLKVPYAAG 122
>gi|83942592|ref|ZP_00955053.1| hypothetical protein EE36_16167 [Sulfitobacter sp. EE-36]
gi|83846685|gb|EAP84561.1| hypothetical protein EE36_16167 [Sulfitobacter sp. EE-36]
Length = 568
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/361 (14%), Positives = 116/361 (32%), Gaps = 33/361 (9%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ + + P ++P P T P++ +P +T + +
Sbjct: 225 SPTPDTTPVSPTPDTTPVSPTPDTTPVSPTPDTTPVSPTPDTEVATAPSAPDARPEEAPA 284
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGL------SKKELLAKNKVGREDTEVPA--- 159
D+ + +I + I G+ + + + + PA
Sbjct: 285 DVVFGAPEQRTDGRPTIGTPAAITSERDTGVTINRLPNAQSGEQTAPEAQATAQSPAITR 344
Query: 160 MDKNFCSNASGARIAIVVSGLGISQTGTQ---RAINLLPANITLAFASNGNSLDRWMKEA 216
+ F + +++++ +G G + A+ P ++ A + M+
Sbjct: 345 YGQPFANPDDKPLMSVLLMDVGSDLQGGEVGIAALRSFPYPLSFAVDVSLPDAAERMQTY 404
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+ +G E + M + D+ T L + R GV+ +GA
Sbjct: 405 RNEGFEVLA---MVDLPQGAQPSDAET------------TLAVAFSRMPEVIGVLEGQGA 449
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ---VD 333
L ++ +A+ + + G + LA K +P ++ D
Sbjct: 450 GLQPDRATADQVTAILGQGGYGLVTQDKGLNTM-PKLAVKEGVPAAP--VFRDFDSKGQT 506
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
IR L A G I + E+I + W Q+ V++ P+S + K ++
Sbjct: 507 PTVIRRFLDQAAFKAGIEGSVIMMGRMRPETISALLVWGLQDRASQVALAPVSAVLKNAT 566
Query: 394 P 394
P
Sbjct: 567 P 567
>gi|83953833|ref|ZP_00962554.1| hypothetical protein NAS141_06398 [Sulfitobacter sp. NAS-14.1]
gi|83841778|gb|EAP80947.1| hypothetical protein NAS141_06398 [Sulfitobacter sp. NAS-14.1]
Length = 564
Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 56/352 (15%), Positives = 116/352 (32%), Gaps = 28/352 (7%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+G + P E P++ + + +PS D + + G +
Sbjct: 234 DALGIETRTAPPVTADESVDTPVSPTPDTDVATAPSAPD----AQPEEAPADVVFGAPEQ 289
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
G+ + P TS RL S ++ + + + + + F +
Sbjct: 290 RTDGRPTIGTPAAITSERDTGVTINRLPTAQSGEQAAPEAQATAQSPAITRYGQPFANPD 349
Query: 169 SGARIAIVVSGLGISQTGTQ---RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+++++ +G G + A+ P ++ A + M+ + +G E +
Sbjct: 350 DKPLMSVLLMDVGSDLQGGEVGIAALRSFPYPLSFAVDVSLPDAAERMQTYRNEGFEVLA 409
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
M + D+ T L + R GV+ +GA L ++ +A
Sbjct: 410 ---MVDLPQGAQPSDAET------------TLAVAFSRMPEVIGVLEGQGAGLQPDRATA 454
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ---VDRDKIREKLK 342
+ + + G + LA K +P ++ D IR L
Sbjct: 455 DQVTAILGQGGYGLVTQDKGLNTM-PKLAVKEGVPAAP--VFRDFDSKGQTPTVIRRFLD 511
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
A G I + E+I + W Q+ V++ P+S + K ++P
Sbjct: 512 QAAFKAGIEGSVIMMGRMRPETISALLVWGLQDRASQVALAPVSAVLKNATP 563
>gi|300983576|ref|ZP_07176668.1| conserved domain protein [Escherichia coli MS 200-1]
gi|300306900|gb|EFJ61420.1| conserved domain protein [Escherichia coli MS 200-1]
Length = 151
Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVR 378
+ + ++LDD + IR + ++AR G I + ++ V+ Q +
Sbjct: 1 MKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPP- 59
Query: 379 DVSVVPLSCLAK 390
D+++V S L
Sbjct: 60 DITLVKASSLLN 71
>gi|261491696|ref|ZP_05988277.1| hypothetical protein COK_0130 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494459|ref|ZP_05990945.1| hypothetical protein COI_0247 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309843|gb|EEY11060.1| hypothetical protein COI_0247 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312649|gb|EEY13771.1| hypothetical protein COK_0130 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 101
Score = 89.3 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
F A++AIV+ +G + R I LP +++A K+A + ++
Sbjct: 21 FTPLVQAAQMAIVIDDVGY-RIKEDREILALPKAVSVAIIPVAPYATERAKDAYNQKRDI 79
Query: 224 ILQIPMQAFDESYNEDDSY 242
++ +PM+ + E+ Y
Sbjct: 80 LIHLPMEPKSKQPIEEGGY 98
>gi|213852110|ref|ZP_03381642.1| hypothetical protein SentesT_04072 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 147
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 324 ADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383
++LDD + IR + E+AR G AI + ++ V+ Q + + D+++V
Sbjct: 1 RKVFLDDTQNEADIRRQFNRTIELARRNGSAIAIGHPHPATVRVLQQMVYRLPA-DITLV 59
Query: 384 -PLSCLAKLSSPSS 396
P S L + +S
Sbjct: 60 RPGSLLNEPQVDTS 73
>gi|195935143|ref|ZP_03080525.1| hypothetical protein EscherichcoliO157_01585 [Escherichia coli
O157:H7 str. EC4024]
Length = 92
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAI 224
S ++AIV+ G + + + +P+ I++A + +A G E +
Sbjct: 18 SSPVLAGKLAIVIDDFGY-RPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVL 76
Query: 225 LQIPMQAFDESYNEDD 240
+ +PM + E +
Sbjct: 77 IHLPMAPLSKQPLEKN 92
>gi|213620697|ref|ZP_03373480.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 83
Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F ++AIV+ G + T+ + LP NI++A N +A G E
Sbjct: 16 AFAHPVFAGKLAIVIDDFGY-RPHTENQVLALPPNISVAVLPNAPHAREMATKAHNSGHE 74
Query: 223 AILQIPMQA 231
++ +PM
Sbjct: 75 VLIHLPMAP 83
>gi|221638404|ref|YP_002524666.1| YibQ protein [Rhodobacter sphaeroides KD131]
gi|221159185|gb|ACM00165.1| YibQ protein [Rhodobacter sphaeroides KD131]
Length = 477
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/326 (12%), Positives = 92/326 (28%), Gaps = 21/326 (6%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
A P ++ D + + + + + +G+ P I
Sbjct: 172 TAATPARSEGAARPGAPAAEADPSAADLPPPPPLTPEEEAMLAEAAGQP---APAEPRRI 228
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQT 185
+ P L + E+ + + F + +I++ G
Sbjct: 229 EPDPPRAPSEASRLP-RIGDPAPAAEEEEPPLRRYAQPFENPGRKPLFSILLQDTG-GPL 286
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
+ A+ LP +T + G E ++ L
Sbjct: 287 LDREALAALPFPVTFVIDPQAPDAATAAGIYRAAGHEVLMLA--------------SGLP 332
Query: 246 VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS 305
L + G+++ + + + + A +G
Sbjct: 333 EGARPADAEVTLESAAAALPEAVGLIDLPAGGFQEARPLSTQVVEILAAQGRGLV-THDH 391
Query: 306 PRNLTRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDES 364
N +A + LP V LD+ + D +R L A G+A+ + E+
Sbjct: 392 GLNAADQVARREGLPAAVVFRRLDEGEADAASVRRALDRAAFKAAQDGRAMVLGDTRPET 451
Query: 365 IEVISQWLQQEHVRDVSVVPLSCLAK 390
++ + +W + V++ P + L +
Sbjct: 452 LKGLMEWSLEGRADGVALAPATALLR 477
>gi|332557435|ref|ZP_08411757.1| YibQ protein [Rhodobacter sphaeroides WS8N]
gi|332275147|gb|EGJ20462.1| YibQ protein [Rhodobacter sphaeroides WS8N]
Length = 486
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/322 (10%), Positives = 81/322 (25%), Gaps = 17/322 (5%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
P E P + + + +
Sbjct: 181 TAATPARSEGAARPGAPAAEADPSAADLPPPPPLTPEEEAMLAEAAGEPAPAEPRRIEPD 240
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQR 189
+ ++ + + F + +I++ G +
Sbjct: 241 PPRAPSEASRLPRIGDPAPAAEEKEPPLRRYAQPFENPGRKPLFSILLQDTG-GPLLDRE 299
Query: 190 AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
A+ LP +T + G E ++ L
Sbjct: 300 ALAALPFPVTFVIDPQAPDAATAAGIYRAAGHEVLMLA--------------SGLPEGAR 345
Query: 250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNL 309
L + G+++ + + + + A +G N
Sbjct: 346 PADAEVTLESAAAALPEAVGLIDLPAGGFQEARPLSTQVVQILAAQGRGLV-THDHGLNA 404
Query: 310 TRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+A + LP V LD+ + D +R L A G+A+ + E+++ +
Sbjct: 405 ADQVARREGLPSAVVFRRLDEGEADAASVRRALDRAAFKAAQDGRAMVLGDTRPETLKGL 464
Query: 369 SQWLQQEHVRDVSVVPLSCLAK 390
+W + V++ P + L +
Sbjct: 465 MEWSLEGRADGVALAPATALLR 486
>gi|126461484|ref|YP_001042598.1| protein of unknown function DUF610, YibQ [Rhodobacter sphaeroides
ATCC 17029]
gi|126103148|gb|ABN75826.1| protein of unknown function DUF610, YibQ [Rhodobacter sphaeroides
ATCC 17029]
Length = 477
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/322 (11%), Positives = 81/322 (25%), Gaps = 17/322 (5%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
P E P + + + +
Sbjct: 172 TAATPARSEGAARPGAPAAEADPSAADLPPPPPLTPEEEAMLAEAAGEPAPAEPRRIETD 231
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQR 189
+ E+ + + F + +I++ G +
Sbjct: 232 PPRAPSEASRLPRIGDPAPAAEEEEPPLRRYAQPFENPGRKPLFSILLQDTG-GPLLDRE 290
Query: 190 AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
A+ LP +T + G E ++ L
Sbjct: 291 ALAALPFPVTFVIDPQAPDAATAAGIYRAAGHEVLMLA--------------SGLPEGAR 336
Query: 250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNL 309
L + G+++ + + + + A +G N
Sbjct: 337 PADAEVTLESAAAALPEAVGLIDLPAGGFQEARPLSTQVVEILAAQGRGLV-THDHGLNA 395
Query: 310 TRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+A + LP V LD+ + D +R L A G+A+ + E+++ +
Sbjct: 396 ADQVARREGLPSAVVFRRLDEGEADAAAVRRALDRAAFKAAQDGRAMVLGDTRPETLKGL 455
Query: 369 SQWLQQEHVRDVSVVPLSCLAK 390
+W + V++ P + L +
Sbjct: 456 MEWSLEGRADGVALAPATALLR 477
>gi|330980648|gb|EGH78751.1| hypothetical protein PSYAP_19076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 103
Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A A +++++ LG +Q R + LP +TLA + ++A +
Sbjct: 19 AAPAENSGKPPKAYLSLIIDDLGQNQDRDSRTLA-LPGPVTLAIMPATPHATEFARQAHR 77
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTL 244
G+ +L +PM Y L
Sbjct: 78 AGKTVMLHMPMDPATGPYAWHPELPL 103
>gi|261494460|ref|ZP_05990946.1| hypothetical protein COI_0248 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309844|gb|EEY11061.1| hypothetical protein COI_0248 [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 79
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ 331
G+ S+ + + + K + L F D + ++ A + + + D++LDD
Sbjct: 1 MGSGATSDSATMQHLMKVLKENTLFFLDSKTIGSSVAAKTARQFGINTLERDIFLDDS 58
>gi|146279130|ref|YP_001169289.1| protein of unknown function DUF610, YibQ [Rhodobacter sphaeroides
ATCC 17025]
gi|145557371|gb|ABP71984.1| protein of unknown function DUF610, YibQ [Rhodobacter sphaeroides
ATCC 17025]
Length = 474
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 80/282 (28%), Gaps = 24/282 (8%)
Query: 116 VNKPTRSTSIDSLPTIEER-----LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ P R I++ P +G + + + F +
Sbjct: 210 ITDPARPRMIEADPPRTTADGSRLPRIGDPDPTTQVTVAPETDLPPIRRYARPFENPMQK 269
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A+++ G + A+ LP +T + G E ++
Sbjct: 270 PLFAVLLRDTG-GPALDREALAGLPFPVTFVIDPQEPGATTAAAMYRAAGHEVLMLA--- 325
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
L T L + G+++ + A +
Sbjct: 326 -----------TGLPEGATAADAEVMLESAALAVPEAVGMIDLPSGGFQEARTLATQVVG 374
Query: 291 EFAKRGLLFF-DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ-VDRDKIREKLKGLEEIA 348
+G D N +A + +LP V LD + + +IR L A
Sbjct: 375 ILEAQGRGLVTHDR--GLNAADQVARRQSLPAAVVFRSLDAEGANAAEIRRVLDRAAFKA 432
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G+ E+++ + +W + V++ P++ L +
Sbjct: 433 AQEGRVAVYGDTRPETVQGLLEWTVEGRADAVALAPVTALMR 474
>gi|126731361|ref|ZP_01747168.1| hypothetical protein SSE37_06829 [Sagittula stellata E-37]
gi|126708272|gb|EBA07331.1| hypothetical protein SSE37_06829 [Sagittula stellata E-37]
Length = 420
Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/348 (14%), Positives = 107/348 (30%), Gaps = 22/348 (6%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
A + + E + + + + +P + +D + G+
Sbjct: 86 AAIESPPEPAAEAGPEAVEDAAPPVETATSEVPAPVTLEPEDAPELAADDPKETPGRPTI 145
Query: 109 DISGKTVVNKPTRSTSIDSLPTI---EERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
++ ++ + LPTI E + + L D+ + F
Sbjct: 146 GTPAGSLADRAPAVSE-GRLPTIGAEAETPVATEEPEALETVADPLGPDSPLVKYASRFT 204
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
R+++++ G G + + P ++ A + + +++G E +
Sbjct: 205 PQTDVPRMSLILVDDGSGPMGPEE-LETFPFPVSFAISPAHPDPKGAAEGYRERGFEVL- 262
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
+ + V + L G GV+ L ++E +
Sbjct: 263 -------ALGDMPEGAVASDVEVS-------LTGLFDAIPGAVGVLEDPSGGLQGSREVS 308
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ-VDRDKIREKLKGL 344
G N + LA K +P LD + D+ IR L
Sbjct: 309 MQAAAFLGSTGHGLV-MVPKGLNTAQKLAAKEGVPSATLFRDLDSEGQDQGLIRRTLDQA 367
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
AR G I + ++I + W Q+ +++VP+S + K S
Sbjct: 368 AFRARQEGAVIMLGRLRADTISALLLWGLQDRGNTIALVPISTVLKES 415
>gi|163731984|ref|ZP_02139430.1| hypothetical protein RLO149_00997 [Roseobacter litoralis Och 149]
gi|161394282|gb|EDQ18605.1| hypothetical protein RLO149_00997 [Roseobacter litoralis Och 149]
Length = 636
Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/344 (13%), Positives = 107/344 (31%), Gaps = 36/344 (10%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
A + P + ++ + + N + + + + P
Sbjct: 311 ADQSVEAPARVALPENTVAVPLSIKPVPMPSNVQPLEGVALADSAAMVSETPAPPAKARS 370
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN-----------FCSNASGARIA 174
+ + LG + +E+ K G + F + + +A
Sbjct: 371 GQDVRVNQLPSLGAAPQEVETKTPDGTAPEPETIAPEAALTPFEMFATDFENPDAKPLMA 430
Query: 175 IVVSGLGISQT---GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
+V+ G T A+ LP ++ A + MK ++ G E + +
Sbjct: 431 VVLMDTGSDLTSGAAGLAALKQLPFPVSFAVDALRPDAAARMKAFREAGFEVLAAVN--- 487
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
L T L +L+ GV+ + + ++ + +
Sbjct: 488 ------------LPSGATAADAEVNLSVALQTLPEVLGVLEGVDTGVQTTVDAGRQVARI 535
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLKGLEEIA 348
A+ G F + + LA + +P V ++ D + IR L A
Sbjct: 536 LAQTGHGFVTQNRGLNTV-QKLAAREGVPSGV--VFRDFDAEDQSALLIRRFLDQAAFRA 592
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
G+ I + +E++ + +W Q+ V++ P+S + +
Sbjct: 593 AQEGEVIMLGRMREETLAALMKWTLQDRASTVAMAPVSAVLAIR 636
>gi|254460615|ref|ZP_05074031.1| Divergent polysaccharide deacetylase family [Rhodobacterales
bacterium HTCC2083]
gi|206677204|gb|EDZ41691.1| Divergent polysaccharide deacetylase family [Rhodobacteraceae
bacterium HTCC2083]
Length = 463
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/360 (15%), Positives = 118/360 (32%), Gaps = 55/360 (15%)
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG-KTVVNKPTRST 123
E L E +Q+ + + + ++ + V +P +
Sbjct: 118 EAGEAELETAEVAETEQAEPETVGADAVEAEPEAKPEAEAEVSGAKTPVPEVEIEPETAA 177
Query: 124 S-----IDSLPTIEERLILGLSKK----------------ELLAKNKVGREDTE---VPA 159
++ +I +++I L K LA +V ED+
Sbjct: 178 EETLENANAAESITDKIIAALPKPVGTVGDLAPEVTTNRLPSLATEEVETEDSPSTVASP 237
Query: 160 MDKNFCSNAS----GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
+ F S A ++IV+ G S G A++ P +T A ++ + M+
Sbjct: 238 PFERFASTAPIENDKPHMSIVLIDTGDSSLGV-EALDSFPYPLTFAVDASIPNAVERMQV 296
Query: 216 AKKKGQEAI--LQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
+ KG E + + +P L T + ++ + L G++
Sbjct: 297 YRDKGFEVLALIDLP---------------LGATASDVEVA--MSAYLAAVPEAVGILEG 339
Query: 274 RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---D 330
+ +++E A+ + + G S R LA + +P ++ D +
Sbjct: 340 VETGVQTSREMADQLTQIILDSGHGMLLQKSGLNT-ARKLAEREGIPAAT--VFRDFDGN 396
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+R L A G + + E+I + W + V++VP+S + K
Sbjct: 397 GQSASVMRRFLDQAAFRAAQEGGVVMMGRLQAETISALLIWGLADRASRVALVPVSAVLK 456
>gi|126737882|ref|ZP_01753612.1| hypothetical protein RSK20926_19612 [Roseobacter sp. SK209-2-6]
gi|126721275|gb|EBA17979.1| hypothetical protein RSK20926_19612 [Roseobacter sp. SK209-2-6]
Length = 527
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/361 (13%), Positives = 108/361 (29%), Gaps = 28/361 (7%)
Query: 32 LFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTV 91
+ G + +G E + P ++P + + + T
Sbjct: 178 AGSAAVPGAQLVTTTDGPAIGQAPEETALPQLSIGEASPPSLPNVALEGEEAAAGPEETS 237
Query: 92 CNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS-LPTIEERLILGLSKKELLAKNKV 150
L + + + +P ++ I + + + ER G + L
Sbjct: 238 DADLAVAGETEGAGEGDPSADQPATEEPIVTSRIGTKVVPLTERDDEGPASSILGGDQAE 297
Query: 151 GREDTEVPAMDKNFCSNASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSL 209
E A + F ++I+ + A+ P ++ A +
Sbjct: 298 ELPPFEANAAE--FSLEGDRPVMSIILIDD---ENGFGAEALAEFPYPLSFAIDPADPAA 352
Query: 210 DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFG 269
M+ + G E ++ + + + + V Q L ++ G
Sbjct: 353 QEKMERWRAAGFEVLI------LADLPQDAAPQDAETSFAVWQNA--LPKAVAVLEGVK- 403
Query: 270 VMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
++G L+++ S G + + + LA + +P V ++ D
Sbjct: 404 -TGFQGNRALADQMSL-----LLQDTGYGMVTQNNGLNTV-QKLALRDGMPAGV--VFRD 454
Query: 330 ---DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
+ IR L AR G I + +++ + W Q+ V++ P+S
Sbjct: 455 FDGAGQNPRAIRRFLDQAAFRARQEGAVIMLGRLQPDTVSALLLWGLQDRAAQVNLAPVS 514
Query: 387 C 387
Sbjct: 515 A 515
>gi|4185554|gb|AAD09126.1| YibQ [Rhodobacter sphaeroides]
Length = 266
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 67/254 (26%), Gaps = 17/254 (6%)
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTG 186
+ E+ + + F + +I++ G
Sbjct: 18 EPDPPRAPSEASRLPRIGDPAPAAEEEEPPLRRYAQPFENPGRKPLFSILLQDTG-GPLL 76
Query: 187 TQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKV 246
+ A+ LP +T + G E ++ L
Sbjct: 77 DREALAALPFPVTFVIDPQAPDAATAAGIYRAAGHEVLMLA--------------SGLPE 122
Query: 247 TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSP 306
L + G+++ + + + + A +G
Sbjct: 123 RARPADAEVTLESAAAALPEAVGLIDLPAGGFQEARPLSTQVVEILAAQGRGLV-THDHG 181
Query: 307 RNLTRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESI 365
N +A + LP V LD+ + D +R L A G+A+ + E++
Sbjct: 182 LNAADQVARREGLPSAVVFRRLDEGEADAASVRRALDRAAFKAAQDGRAMVLGDTRPETL 241
Query: 366 EVISQWLQQEHVRD 379
+ + +W +
Sbjct: 242 KGLMEWSLEGRADG 255
>gi|110680390|ref|YP_683397.1| hypothetical protein RD1_3208 [Roseobacter denitrificans OCh 114]
gi|109456506|gb|ABG32711.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 648
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/340 (15%), Positives = 108/340 (31%), Gaps = 28/340 (8%)
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQH---DGQIQNDISGKTVVNKPTR 121
+ PL + +P + + + D V ++ +
Sbjct: 325 QSVAAPLDVAAPENTVAAPLSIQPAPAPSTAPPLDAVALADTAALLPDTEDAPVESRSGQ 384
Query: 122 STSIDSLPTIEERLI---LGLSKKELLAKNKVGREDTEVPAM--DKNFCSNASGARIAIV 176
++ LPT+ G ++ G E P F + + +A+V
Sbjct: 385 DVRVNQLPTLGAAPQQEGAGGPERTAQEPETAGPEAALTPFARFATGFENPDAKPLMAVV 444
Query: 177 VSGLGISQ---TGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
+ G T A+N LP +T A + MK + G E + +
Sbjct: 445 LMDTGRDLSSATVGLAALNALPFPVTFAVDALRPDAAARMKAYRDAGFEVLATVD----- 499
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
L T L +L+ GV+ + ++ ++ + + A
Sbjct: 500 ----------LPAGATAADAEVNLSVALQAVPEALGVLEGVETGVQTSADAGRQVARILA 549
Query: 294 KRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ-VDRDKIREKLKGLEEIARTTG 352
+ G F ++ + LA + +P V LD + IR L A G
Sbjct: 550 QTGHGFVTQNRGLNSI-QKLAAREGVPSGVVFRDLDAEGQSSLLIRRFLDQAAFRAAQEG 608
Query: 353 QAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
I + +E++ + +W Q+ V++ P+S + +
Sbjct: 609 DVIMLGRVSEETLAALMKWTLQDRASTVAMAPVSAVLAIR 648
>gi|86138846|ref|ZP_01057418.1| hypothetical protein MED193_03722 [Roseobacter sp. MED193]
gi|85824493|gb|EAQ44696.1| hypothetical protein MED193_03722 [Roseobacter sp. MED193]
Length = 567
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/359 (13%), Positives = 104/359 (28%), Gaps = 45/359 (12%)
Query: 49 AFVGTISEMIPYSVIR-EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ 107
G P + +R IA +P+ P + + + +
Sbjct: 224 DLSGPQIGAAPTATVRPSIAVMPVATPNAARADTQAEAETDAEETASAVGAEPEQEATLA 283
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM------- 160
S + T D T RL + ++ + PA+
Sbjct: 284 ERQS--VLSPSDQDQTEADQQETTGSRLASRVVPLTERSRTPTLIGNNAEPAVEATSPQG 341
Query: 161 ------DKNFCSNASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWM 213
+ F + ++IV + + A+ P +T A + +
Sbjct: 342 TPFEINAEEFTAPEGRPLMSIVLIDD---AVAIGAEALESFPYPLTFAISPQDPNAAEKT 398
Query: 214 KEAKKKGQEAIL--QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVM 271
+ + G E ++ +P +A + Q + +++ G++
Sbjct: 399 QARRAAGFEVLMLADLPREA-----------------SPQDAETAMAVWIQQMPQAVGIL 441
Query: 272 NYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-- 329
N+ A+ + G + + + LA + +P V ++ D
Sbjct: 442 EGVQTGFQGNRALADQMVAVMQASGFGMVTQNNGLNTV-QKLALRDGIPSGV--VFRDFD 498
Query: 330 -DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+ IR L AR G I + ++I + W Q+ V + P+S
Sbjct: 499 GAGQNPRAIRRFLDQAAFRARQEGAVIMLGRLRPDTISALLLWGLQDRASQVGLAPISA 557
>gi|254486563|ref|ZP_05099768.1| YibQ protein [Roseobacter sp. GAI101]
gi|214043432|gb|EEB84070.1| YibQ protein [Roseobacter sp. GAI101]
Length = 469
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/352 (15%), Positives = 105/352 (29%), Gaps = 29/352 (8%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
V + +V E + + + E Q+ + + +++ ++
Sbjct: 130 DPVVPEPTLEEETVAEEAPTVDVPVETADEAPQATPTEAQPKMPVTVIVEAAPKKSEVTA 189
Query: 109 DISGKTVVNKPTRSTSID-----SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
+ K T+ P RL LS + + + + +
Sbjct: 190 MPAPKMAKIPSANRTADADTDPRGAPVTVNRLPTALSGERTEEDPQQAASEGAISRYARP 249
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLL---PANITLAFASNGNSLDRWMKEAKKKG 220
F + + I++ G + I L P I+ A + M + +G
Sbjct: 250 FENPDDKPLMGILLIDQGTDLEDGEVGIAALRNFPYPISFAIDVSLPDAANRMAIYRNEG 309
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
E + M E D+ T L +L R GV+ G L
Sbjct: 310 FEVLA---MVDLPEGAQASDAET------------TLAVALTRMPDVIGVLEGLGNGLQP 354
Query: 281 NKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ---VDRDKI 337
++ A+ + A+ G + LA K +P ++ D I
Sbjct: 355 DRGLADQVTAILAQGGHGLVTQDKGLNTM-PKLAIKEGVPASA--IFRDFDSKGQTATVI 411
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
R L A G I + E+I + W Q+ V++ P+S +
Sbjct: 412 RRFLDQAAFKAGIEGSVIMMGRLRPETISALLVWGLQDRASQVALAPISAVL 463
>gi|254477484|ref|ZP_05090870.1| Divergent polysaccharide deacetylase family [Ruegeria sp. R11]
gi|214031727|gb|EEB72562.1| Divergent polysaccharide deacetylase family [Ruegeria sp. R11]
Length = 536
Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 53/336 (15%), Positives = 96/336 (28%), Gaps = 27/336 (8%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN--KPTRST 123
AP P PL Q ++ +S Q + T N + +T
Sbjct: 221 SAPDPTATPLLPGQGQPAPEQVGTQTPEVAAQESDDSGAQPSRIAALPTTTNTGEAVETT 280
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV-VSGLGI 182
+ + + + R A + F A ++IV +
Sbjct: 281 RPRIGTPAGSLVDRDRTDEGTEPASVSPRGLDPFVANAEAFTPEEGRALMSIVLIDD--- 337
Query: 183 SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
+ A+ P +T A N M+ + G E ++
Sbjct: 338 ADAIGAEALQDFPYPLTFALDPNDPRAVEKMRAHRAAGFEVMV---------------MA 382
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDD 302
L + Q L L + V+ N+ A+ + G
Sbjct: 383 DLARDASPQDAETALAVWLDQLPSSVAVLEGVQTGFQGNRPLADQMAAALDAMGYGMVTQ 442
Query: 303 GSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLKGLEEIARTTGQAIGVAV 359
+ + + LA + +P V ++ D D IR L A G I +
Sbjct: 443 DAGLNTV-QKLALRNGMPAGV--VFRDFDGAGQDPRAIRRFLDQAAFRAGQEGAVIMLGR 499
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
++I + W Q+ VS+ P+S + P+
Sbjct: 500 VQPDTISALLLWGLQDRASRVSLAPVSASLRAKLPT 535
>gi|126735659|ref|ZP_01751404.1| hypothetical protein RCCS2_17326 [Roseobacter sp. CCS2]
gi|126714846|gb|EBA11712.1| hypothetical protein RCCS2_17326 [Roseobacter sp. CCS2]
Length = 530
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/347 (13%), Positives = 98/347 (28%), Gaps = 36/347 (10%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQ-SPSKRDNNTVCNQLKNDSSQHDGQIQ 107
A V +E V E AP + P+ T +N S Q +
Sbjct: 208 APVVDTAESNEAVVEVEPAPDAGESETVVAQDAVRPAGVPETTTDVAEENTSQQGTAIVA 267
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK---NF 164
+ + + R + + P + E+ V + PA+ + F
Sbjct: 268 DALPPTNTAVRINRPGTTEEEP-----------QPEIAEPAAVDEIADDAPALLRYGVPF 316
Query: 165 CSNASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
+ A I+++ + A+ L T+A + + + + G E
Sbjct: 317 DPAEATALISVILIDD--GQMADAPAAVAELGFVATVAVNALSSVSTDLAADYRAAGVEV 374
Query: 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKE 283
+Q + V + + + G M ++
Sbjct: 375 AMQA--------ELPPGAQPTDVEVAFEAARGLVPEVAMLFSDGTGAM--------QDRA 418
Query: 284 SAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-DQVDRDKIREKLK 342
+ + A G F + A + + + +D D+ I L
Sbjct: 419 VTAQVMEILASDGYGFV-TVQRGLSNAARAADQAGVSAATIERDIDGAGEDQRMILRALD 477
Query: 343 GLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
AR TG A+ + E++ + W + + P+S +
Sbjct: 478 QAAFRARQTGTAVLLGRVTPETLAALRDWAADIDRETLEIAPVSAVL 524
>gi|149913761|ref|ZP_01902293.1| hypothetical protein RAZWK3B_17198 [Roseobacter sp. AzwK-3b]
gi|149812045|gb|EDM71876.1| hypothetical protein RAZWK3B_17198 [Roseobacter sp. AzwK-3b]
Length = 500
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/359 (16%), Positives = 115/359 (32%), Gaps = 33/359 (9%)
Query: 41 SIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS 100
+ + A ++ P I P P+ +
Sbjct: 162 GAFPGVGTAPAEAPADAAPEPEIAAPEPAAPETAEPETPAPEPAVPETARTEQPAPRTIG 221
Query: 101 -QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
++++ ++ P E G + A+ +DT PA
Sbjct: 222 TGEPSGTIDNLAQGVTTDRLPSLRETPEDPAPEAAPEAG--QGADSAQTPEAVDDTSRPA 279
Query: 160 MDK---NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+++ F + + ++IV+ G S G A+ P I++A ++ +
Sbjct: 280 IERFAVEFANPDNKPLMSIVLIDDGSSPIGPD-AVLDFPYPISMAVDASWPGALQRSGAY 338
Query: 217 KKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGA 276
+ G E + + D + + ++ L+ VM G
Sbjct: 339 RAAGFEVL--------AITDLPDGASAIDTEVAMETF-------LKAVPEAVAVMEAPGD 383
Query: 277 MLLSNKESAEVIFKEFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQ 331
L +N++++E + + GL+ F DG + + LA K +P A ++ D
Sbjct: 384 ALQANRDASEQMAAILLETGHGLVMFPDG---LDTAQKLAAKAGVP--SATVFRDFDSAG 438
Query: 332 VDRDKIREKLKGLEEIARTTGQ-AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
D IR L A I V ++I + W Q+ V++ P+S L
Sbjct: 439 QDDAAIRRFLDQAAFRAGQEEVGVIMVGRLRPDTISALLLWGLQDRASRVALAPVSALL 497
>gi|163736557|ref|ZP_02143976.1| hypothetical protein RGBS107_15536 [Phaeobacter gallaeciensis
BS107]
gi|161390427|gb|EDQ14777.1| hypothetical protein RGBS107_15536 [Phaeobacter gallaeciensis
BS107]
Length = 557
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/347 (12%), Positives = 97/347 (27%), Gaps = 29/347 (8%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG---QIQND 109
+ + + + P + Q+ + T + ++ ++ +
Sbjct: 229 GPTAIPVVPGLGQAGPTEVGTQPAANASQADGAQPETTDEDANEDAGARRIADLPTTKPT 288
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ V++ I + + + ++ ++ + F A
Sbjct: 289 TEPDSAVDEAGSRPRIGTPVRPLTERDQATAP-AVGSQTSAQQDGVPFERNAEAFTPEAD 347
Query: 170 GARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
A ++IV + + A+ P ++ A M + G E +L
Sbjct: 348 RALMSIVLIDD---ADAIGAEALQDFPYPLSFALDPQDPEAAAKMARHRAAGFEVML--- 401
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
L Q L+ L V+ N+ A+ +
Sbjct: 402 ------------IADLPRDAAPQDAETALQVWLESLPEAVAVLEGVNTGFQGNRPLADQM 449
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLKGLE 345
G + + + LA + +P V ++ D D IR L
Sbjct: 450 ATALGAMGYGMVTQDAGLNTV-QKLALREGVPAGV--VFRDFDGAGQDPRAIRRFLDQAA 506
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
A G I + ++I + W Q+ V++ P+S +
Sbjct: 507 FRAGQEGAVIMLGRVQPDTISALLIWGLQDRANRVALAPVSASLRAK 553
>gi|260433614|ref|ZP_05787585.1| YibQ protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417442|gb|EEX10701.1| YibQ protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 484
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/342 (13%), Positives = 101/342 (29%), Gaps = 27/342 (7%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
+ S + +P E + ++ + + +I
Sbjct: 162 SGPSPDQGSQPDADSAEIAALPQEPEANVPSVTSQSPIAVEGDEDTAPRKRARIAALPQI 221
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P+ S + + ER + E+ + A F +
Sbjct: 222 GAEPTAPSTSGVGKRVVPLTERDDPPADQTEITQ--PEAPPGDPIDAYAAPFENPEGKPL 279
Query: 173 IAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
++IV + G A+ P ++ A + +K ++ G E ++
Sbjct: 280 MSIVLIDDEG---AFGAEALKDFPYPLSFAIDPSDPQAAEKVKRYREAGFEVLILTD--- 333
Query: 232 FDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKE 291
L + + Q L L G++ + N+ A+ +
Sbjct: 334 ------------LPRSFSAQDAEVSLSVWLEALPETVGLLEGVETGIQGNRRLADQVAAI 381
Query: 292 FAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK-LKGLEEIA 348
RGL+ D G N + LA + +P + +D + + L A
Sbjct: 382 AGATGRGLVVQDKG---LNTVQKLAARNGIPSSIVFRDIDRAGQEADVMRRFLDQAAFRA 438
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
G + + E+I + W ++ V++ P+S + K
Sbjct: 439 SQEGAVVMLGRLRPETISALLLWGLEDRSSRVALAPISAVMK 480
>gi|260426890|ref|ZP_05780869.1| YibQ protein [Citreicella sp. SE45]
gi|260421382|gb|EEX14633.1| YibQ protein [Citreicella sp. SE45]
Length = 512
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/355 (13%), Positives = 98/355 (27%), Gaps = 26/355 (7%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQH 102
+ ++A + A L +P + +
Sbjct: 177 VVAAANAPRRGEATSPVTEAPEAEASPELATETAAPPMPAPYG-GATSEPEPEAEAIPEV 235
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-EVPAMD 161
Q + P S +RL A + G +
Sbjct: 236 VVLPQTGGESRPATGTPAGSLIGRDGTGPSDRLPRIGDDTAASADSTDGAGGLRPLDVFS 295
Query: 162 KNFCSNASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKG 220
++IV + S + P ++ A + + + +++G
Sbjct: 296 APSNLTPGEPHMSIVLIDD--GSGPLGPETVGEFPFPVSFAISPSHPDAIGAARAYREEG 353
Query: 221 QEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS 280
E + + ++ + L +L GV+ G L +
Sbjct: 354 FEVLT-MASAPDGAQASD--------------VEISLEGALGAVPEAIGVLEAPGDGLQA 398
Query: 281 NKESAEVIFKEFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ-VDRDKI 337
++ A+ + GLL G N + LA + +P D + D +
Sbjct: 399 SRAIADQTARFLHASGHGLLMLPKG---LNTGQALALREGVPSATVFRDFDGEGQDPRVM 455
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
R L AR G + + +++ + W Q+ V +VP+S + + S
Sbjct: 456 RRFLDQAAFKARQEGPVVMLGRLRADTVSALLLWGLQDRASSVELVPVSAILRES 510
>gi|56697013|ref|YP_167375.1| hypothetical protein SPO2148 [Ruegeria pomeroyi DSS-3]
gi|56678750|gb|AAV95416.1| hypothetical protein SPO2148 [Ruegeria pomeroyi DSS-3]
Length = 481
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/349 (13%), Positives = 106/349 (30%), Gaps = 31/349 (8%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK--RDNNTVCNQLKNDSSQHDGQI 106
A ++ + + + P + + Q + T + + ++
Sbjct: 151 APETGVTAEVTAPSLPDSTPAVPETATDAQPAQESASVAEAPATDTAPVPDTATAAPEAP 210
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
Q + + + P + ++ + +A+ + A F +
Sbjct: 211 QEEEKPRIAALPQIGGAEEGAAPRVGTPVVPLTERDSAVAEAPAEGGPRPIEAYAATFDN 270
Query: 167 NASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
++IV + ++ A+ P +T A M + G E +L
Sbjct: 271 PEDKPLMSIVLIDD---AEGLGSEALRDFPYPLTFALDPADPQAAEKMARHRAAGVEVML 327
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
L + Q + L+ G++ G + N+ +
Sbjct: 328 ---------------IADLPAAASAQDAEVSMAVWLKALPETVGILEGTGTGIQGNRALS 372
Query: 286 EVIFKEFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREK 340
+ + RGLL D+G N + LA + +P V ++ D +R
Sbjct: 373 DQVTAIVGGSGRGLLTQDNG---LNTVQKLAARDGVPSAV--VFRDFDGAGQSPTVMRRF 427
Query: 341 LKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
L A G + + ++I + W Q+ V++ P+S +
Sbjct: 428 LDQAAFRAGQEGAVVMLGRLRPDTISALLLWGLQDRASRVALAPVSAVL 476
>gi|77462550|ref|YP_352054.1| YibQ protein [Rhodobacter sphaeroides 2.4.1]
gi|77386968|gb|ABA78153.1| YibQ protein [Rhodobacter sphaeroides 2.4.1]
Length = 477
Score = 72.8 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/311 (10%), Positives = 74/311 (23%), Gaps = 17/311 (5%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
P E P + + + +
Sbjct: 172 TAATPARSEGAARPGAPAAEADPSAADLPPPPPLTPEEEAMLAEAAGEPAPAEPRRIEPD 231
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQR 189
+ E+ + + F + +I++ G +
Sbjct: 232 PPRAPSEASRLPRIGDPAPAAEEEEPPLRRYAQPFENPGRKPLFSILLQDTG-GPLLDRE 290
Query: 190 AINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
A+ LP +T + G E ++ L
Sbjct: 291 ALAALPFPVTFVIDPQAPDAATAAGIYRAAGHEVLMLA--------------SGLPERAR 336
Query: 250 VQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNL 309
L + G+++ + + + + A +G N
Sbjct: 337 PADAEVTLESAAAALPEAVGLIDLPAGGFQEARPLSTQVVEILAAQGRGLV-THDHGLNA 395
Query: 310 TRVLAPKLNLPYMVADLYLDD-QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
+A + LP V LD+ + D +R L A G+A+ + E+++ +
Sbjct: 396 ADQVARREGLPSAVVFRRLDEGEADAASVRRALDRAAFKAAQDGRAMVLGDTRPETLKGL 455
Query: 369 SQWLQQEHVRD 379
+W +
Sbjct: 456 MEWSLEGRADG 466
>gi|163742795|ref|ZP_02150180.1| hypothetical protein RG210_15660 [Phaeobacter gallaeciensis 2.10]
gi|161384050|gb|EDQ08434.1| hypothetical protein RG210_15660 [Phaeobacter gallaeciensis 2.10]
Length = 545
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/347 (12%), Positives = 98/347 (28%), Gaps = 29/347 (8%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG---QIQND 109
+ + + + P + Q+ + T + ++ ++ +
Sbjct: 217 GPTAIPVVPGLGQAGPTEVGTQPAANASQADGAQPETTDEDANEDAGARRIADLPTTKPT 276
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ V++ I + P + + ++ ++ + F A
Sbjct: 277 TESDSAVDEAGSRPRIGT-PVRPLTERDQANAPAVGSQTSAQQDGVPFERNAEAFTPEAD 335
Query: 170 GARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
A ++IV + + A+ P ++ A M + G E +L
Sbjct: 336 RALMSIVLIDD---ADAIGAEALQDFPYPLSFALDPKDPEAAAKMARHRAAGFEVML--- 389
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
L Q L+ L V+ N+ A+ +
Sbjct: 390 ------------IADLPRDAAPQDAETALQVWLESLPEAVAVLEGVNTGFQGNRPLADQM 437
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLKGLE 345
G + + + LA + +P V ++ D D IR L
Sbjct: 438 ATALGAMGYGMVTQDAGLNTV-QKLALREGVPAGV--VFRDFDGAGQDPRAIRRFLDQAA 494
Query: 346 EIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
A G I + ++I + W Q+ V++ P+S +
Sbjct: 495 FRAGQEGAVIMLGRVQPDTISALLIWGLQDRANRVALAPVSASLRAK 541
>gi|126726376|ref|ZP_01742217.1| hypothetical protein RB2150_01709 [Rhodobacterales bacterium
HTCC2150]
gi|126704239|gb|EBA03331.1| hypothetical protein RB2150_01709 [Rhodobacterales bacterium
HTCC2150]
Length = 426
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/352 (13%), Positives = 110/352 (31%), Gaps = 39/352 (11%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS- 122
+ A +P + D +P+ DN T + S+ + +P
Sbjct: 92 TQSAAVPEVTLDSPSDMPAPNVNDNETFASGPVKLPSEEGDVPFLLGTSGAATEEPAPRL 151
Query: 123 ----TSIDSLPTIEERLIL-----GLSKKELLAKNKVG----------REDTEVPAMDKN 163
T+ D P + G+ + L+++++ + +
Sbjct: 152 IQIDTATDDAPALNTEPAAPSIAIGVPVEPLVSQSQTPTAPVVEEAAAADPRALVRNAVK 211
Query: 164 FCSNASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
F + ++I+ ++ QT ++ +T A N + G E
Sbjct: 212 FENPDDKPLVSIILIT--PPDQTLAATLLDAFSFPVTFAVDPNDPQAAERAQIYHDAGFE 269
Query: 223 AILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+ ++ T Q + L S+ GV++ +L S++
Sbjct: 270 VVFLA--------------NGIQTGATAQDVEVALEASIGMVPVAVGVLDTTEGVLNSSR 315
Query: 283 ESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK-IREKL 341
+ ++F+ G N + A KL++ LD + + I+ L
Sbjct: 316 DIQAQTAEKFSITGHGLI-SYEGGLNGSSREADKLDVKNTSVFRVLDAEGEAANLIKRYL 374
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
A G + V +++ + +W E ++ + P+S + L
Sbjct: 375 SRAAFRAGQAGDVVVVGQTNANTLQAVIEWSLDERPDEIVLAPISAVLSLPR 426
>gi|254510103|ref|ZP_05122170.1| YibQ protein [Rhodobacteraceae bacterium KLH11]
gi|221533814|gb|EEE36802.1| YibQ protein [Rhodobacteraceae bacterium KLH11]
Length = 512
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/340 (14%), Positives = 105/340 (30%), Gaps = 33/340 (9%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
E + S +E AP + E ++ + + ++ +
Sbjct: 189 EQVVESAPQEDAPQVAVVEPEPESVPEIESLPQEN-PIAVEGEEDTRPVRQPRVLTLPQI 247
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+ + S+ + +V + +F + + ++I
Sbjct: 248 GGEQSESSGTLIGKRVVPLTERDNPP---AETPEVVVATKPIDEYAASFDNPEAKPLMSI 304
Query: 176 V-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
+ + G A+ P I+ A + N M ++ G E + I
Sbjct: 305 ILIDDEG---AFGAEALQDFPYPISFAVSPNDPDAAEKMVRHREAGFEVLALID------ 355
Query: 235 SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK 294
L + Q L L G++ + + N++ A+ +
Sbjct: 356 ---------LHEAASAQDAEVSLSVWLDELPYTVGLLEGVESGIQGNRKLADQVAAIAGG 406
Query: 295 --RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLKGLEEIAR 349
RGL+ D G N + LA + +P V ++ D + D +R L A
Sbjct: 407 TGRGLVTQDSG---LNTVQKLAARNGIPSSV--VFRDFDGARQDPKVMRRFLDQAAFRAG 461
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
G + + E+I + W ++ V++ P+S +
Sbjct: 462 QEGAVVMLGRLRPETISALLLWGLEDRGNRVAMAPISAVM 501
>gi|259418547|ref|ZP_05742464.1| divergent polysaccharide deacetylase family [Silicibacter sp.
TrichCH4B]
gi|259344769|gb|EEW56623.1| divergent polysaccharide deacetylase family [Silicibacter sp.
TrichCH4B]
Length = 499
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 56/365 (15%), Positives = 115/365 (31%), Gaps = 44/365 (12%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPS-KRDNNTVCNQLKNDSSQHDGQIQ 107
A E + +E P + L+ ++P N + +
Sbjct: 161 ALTAPEEETPAPELSQEAEDTPAPVRLDSAAVEAPGIGTPPNATPSPNLTTPPVRSDETG 220
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-----EVPAMDK 162
+ +G+ + ++ + E +G L +NK E E P +
Sbjct: 221 ENDTGELRIADLPQTAGDEG---TEPGPSIGTRVVPLTERNKAAPETDAEATPETPPFVR 277
Query: 163 ---NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
++I++ + A+ P +T A + MK +
Sbjct: 278 NAEPASPEPGVPLMSIIL--IEEEGAVGAEALEDFPYPLTFAIDPSDPDAVARMKARRAA 335
Query: 220 GQEAIL--QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAM 277
G E ++ +P + Q + R G++ +
Sbjct: 336 GFEVMVLADLPREGQ-----------------PQDAETAMPVWFDRLPEAVGILEGIDSG 378
Query: 278 LLSNKESAEVIFKEFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQV 332
+ N+ A+ + A GL+ D+G N + +A + +P V ++ D
Sbjct: 379 VQGNRPLADQVATIAADLGYGLVLQDNG---LNTVQKMALRDGIPSGV--VFRDFDGAGQ 433
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC-LAKL 391
D +R L + G I + ++I + W Q+ V +VP+S L +L
Sbjct: 434 DPRAMRRFLDQAAFRSGQEGAVIMLGRLKPDTISALLIWGLQDRASRVELVPISTSLKRL 493
Query: 392 SSPSS 396
P++
Sbjct: 494 LEPNA 498
>gi|254463730|ref|ZP_05077141.1| Divergent polysaccharide deacetylase family [Rhodobacterales
bacterium Y4I]
gi|206684638|gb|EDZ45120.1| Divergent polysaccharide deacetylase family [Rhodobacterales
bacterium Y4I]
Length = 522
Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/361 (13%), Positives = 105/361 (29%), Gaps = 43/361 (11%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
E + + A P + +P + V + Q +
Sbjct: 182 PEPEQPAQEPDTAAQPQDAAPLPAVRHAPDTQAAAAVLAPDIGAAPQATTLPVIGAAPSV 241
Query: 115 -------------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP--- 158
V P I ++ + + + + P
Sbjct: 242 PDASAGDEALPSEAVPAAEAPQQEALAPRIGTPVVPLTDRDDAQEIAVAAAQPLDNPPFQ 301
Query: 159 AMDKNFCSNASGARIAIV-VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAK 217
A + F + + ++IV + G A+ P ++ A + M +
Sbjct: 302 AFSEPFHNLENRPLMSIVLIDDAG---AVGAEALAAFPYPLSFAIDPGDPDSEAKMAARR 358
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGY-FGVMNYRGA 276
G E ++ + + ++ +R+ ++ G GV +G
Sbjct: 359 AAGFEVLM--------LADLPRAATPQDAEMALEVWRSRVPEAVAILEGVETGV---QGN 407
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVD 333
L+++ + A GL+ + G N + LA + +P V ++ D
Sbjct: 408 RPLADQVA---AMAASAGYGLVTQNSG---LNTVQRLALRDGVPAGV--VFRDFDGAGQT 459
Query: 334 RDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
IR L A G I + ++I + W ++ V++ P+S +
Sbjct: 460 PRAIRRFLDQAAFRAGQEGSVIMLGRLRPDTISALLIWGLEDRAARVALAPVSASLEAQL 519
Query: 394 P 394
P
Sbjct: 520 P 520
>gi|255264466|ref|ZP_05343808.1| YibQ protein [Thalassiobium sp. R2A62]
gi|255106801|gb|EET49475.1| YibQ protein [Thalassiobium sp. R2A62]
Length = 589
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/336 (11%), Positives = 93/336 (27%), Gaps = 22/336 (6%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P E P ++ + + Q + + + +K
Sbjct: 271 PTVAETEGQDDPNEQDETNVQVAEAVNQELEGTPSDETSLEPQ--TNVDDLFASLVEPSK 328
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV-V 177
P + + D E + L+ E + + F + +++V +
Sbjct: 329 PAGTPAGDLAKLAPEIKVNRLTDTETEDTSDADVSRNALVDYAIAFDNPDDKPLLSVVLI 388
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYN 237
T A+ +T+A + + M+ + G E ++ +
Sbjct: 389 DDGAGGLGPT--ALTSFTFPVTVAINAAQQNATELMQSYRDAGAEVMV--------LTNV 438
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ + + V++ ++ + + A RG
Sbjct: 439 PRGAQAADLEVAFEAYR-------TAVPEAVAVLDGGENGFQEDRALVSQVTEILASRGQ 491
Query: 298 LFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-DQVDRDKIREKLKGLEEIARTTGQAIG 356
++ + +A + + + LD D IR L AR G +
Sbjct: 492 GLLTQAKGLNSV-QRVAQEAGVASALVFRDLDVAGQDARVIRRFLDQAAFTARQKGDVVV 550
Query: 357 VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+ ++I + W + V + P+S + S
Sbjct: 551 LGRMRADTISALLLWGAGDRADQVELAPISAVLTGS 586
>gi|84686959|ref|ZP_01014842.1| hypothetical protein 1099457000244_RB2654_01595 [Maritimibacter
alkaliphilus HTCC2654]
gi|84664933|gb|EAQ11414.1| hypothetical protein RB2654_01595 [Rhodobacterales bacterium
HTCC2654]
Length = 461
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/354 (14%), Positives = 104/354 (29%), Gaps = 41/354 (11%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQL---------------KNDSSQH 102
+ E AP+P ED + D + + +
Sbjct: 124 AEPETVSEAAPVPAVSDTPDEDLAEAPEADAPKATDTEVAQLPMVIAPSNPTEPDVAMPE 183
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN-KVGREDTEVPAMD 161
G G +V + P P ++ G + + + PA+
Sbjct: 184 TGNDTVRAEGASVFDPPPLEDDTLEEPAPSGPVVTGRLPTIGESAADEAAVDAGPQPAIR 243
Query: 162 K---NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
+ + A +A+++ +G + + ++P +++A ++ + +
Sbjct: 244 RNAVPYDGIAELPEMAVLLMDMGPGREDVGD-LAVMPFPMSVAVDASSPDAAEAIAFYRA 302
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G E +L +P+ L V + VM A
Sbjct: 303 NGAEVVLIVPL------------PELATAMDVDVTFQAYDPLMTDI---VAVMFPPEAGF 347
Query: 279 LSNKESAEVIFKEFAKRGLLFFDDGSSPR--NLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
++A + +RGL + P N +A ++P LD
Sbjct: 348 QGLGDAAAQVVTNLDERGLGLV---TYPEGLNTGHKVAVSEDVPAGQIFRDLDGDGQAGD 404
Query: 337 IREKLKGLEE-IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ + AR I VA ESI+ + +W + V+ P+S +
Sbjct: 405 VMRRFLDNVAFRARNDDGVIAVARVRPESIQALLEWSLGNRAQSVNFAPVSAVL 458
>gi|159044346|ref|YP_001533140.1| hypothetical protein Dshi_1797 [Dinoroseobacter shibae DFL 12]
gi|157912106|gb|ABV93539.1| hypothetical protein Dshi_1797 [Dinoroseobacter shibae DFL 12]
Length = 608
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/340 (14%), Positives = 98/340 (28%), Gaps = 26/340 (7%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ + P+P PL + + + + + + + G
Sbjct: 285 PPVAAAPMEASEPPVPAAGPLPADLRPAADTPAPPADDRRTALVVPPREL-PRRLVLGSD 343
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+P I E + + L + +V + F R+A
Sbjct: 344 QSFGTRGPGLSSRIPRIGETAAVAEADDPLTPEPEVPAPLGALARNALPFEGAEGVPRLA 403
Query: 175 IVVSGLGISQTGTQRAI----NLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
+V + T RAI + + + +A D E + G E ++ +
Sbjct: 404 LV-----LRATSDARAITDVLSRIADPVAVALDPTWPEADARAAELRAAGHEVLITL--- 455
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
L + + L + R G GV R + + ++E +
Sbjct: 456 -----------TGLPDPVEPRDIDTALAVHIARLPGAMGVWLPRTSPVFGDRELLRHLVA 504
Query: 291 EFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVD-RDKIREKLKGLEEIAR 349
G S + A + LP + L + D +R L A
Sbjct: 505 VLGDTGHGLVAPL-SGLDAVGQEARAIGLPAISVGRVLGGSGEGEDALRRSLDQGALRAG 563
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
GQA+ + E++ + W + + + P+S L
Sbjct: 564 ADGQAVLLGETRAETLSALRDWSAAQDPDALRLAPISALL 603
>gi|89054372|ref|YP_509823.1| hypothetical protein Jann_1881 [Jannaschia sp. CCS1]
gi|88863921|gb|ABD54798.1| protein of unknown function DUF610 YibQ [Jannaschia sp. CCS1]
Length = 575
Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/342 (12%), Positives = 97/342 (28%), Gaps = 27/342 (7%)
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
I + P + +P + + + + V PT
Sbjct: 252 AIVDPEPEIVPLPTPVFPSIGDQALSEEETATGAPDLPADIGDAPSLSRPAEDVAALPTP 311
Query: 122 STSIDSLPTIEERLILGLSK--KELLAKNKVGREDTEVPA---MDKNFCSNASGARIAIV 176
+ S + ++ + L ++ + ++PA F +A+V
Sbjct: 312 AFPQTSGLPQVAIPMEREAEVEEPLPEEDPAPVDLGDLPAIQAFAAPFDGAGDRPLMAVV 371
Query: 177 VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESY 236
+ SQ + + A ++ G E ++ M +
Sbjct: 372 LIDEPESQ-IDIETLTRFTFPVAFAVDPLHPDGAARAAAYREAGFEVVILGAMVPDGATA 430
Query: 237 NEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRG 296
+ + L +L V++ + ++ + + A G
Sbjct: 431 VDTEVA--------------LMAALADLPEAVAVIDTPEGRIQGDRPVLDAMVGALADSG 476
Query: 297 LLFFDDGSSPR--NLTRVLAPKLNLPYMVADLYLDDQVDRDKIREK-LKGLEEIARTTGQ 353
+ PR N A + +P YLD + +R + + L A G
Sbjct: 477 HGLV---AFPRGLNAAEQSASRAGVPGATVFRYLDGEDERATVITRFLSRAAFAAAQEGT 533
Query: 354 AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC-LAKLSSP 394
+ V +++ + W V++ PLS L + +S
Sbjct: 534 VVVVGRTRPDTVTALFSWALGGRSEAVALAPLSATLLRAASE 575
>gi|83951840|ref|ZP_00960572.1| hypothetical protein ISM_14795 [Roseovarius nubinhibens ISM]
gi|83836846|gb|EAP76143.1| hypothetical protein ISM_14795 [Roseovarius nubinhibens ISM]
Length = 480
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/362 (17%), Positives = 114/362 (31%), Gaps = 43/362 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
F S P S + + A P ++ + D + +N++ +
Sbjct: 139 FASAESGSFPSSELADAATAPEGAGAVSQETG--AAEDGAQTPDSERNEAEHMLPVVPE- 195
Query: 110 ISGKTVVNKPTRSTSIDSLP---TIEERLILGLSKKELLAKNKVGREDTEVPAMDKN--- 163
V +P S ++ +L T +G + + E+ D
Sbjct: 196 --PAPKVTEPEPSKTVGNLAKNVTTNRLPSIGAETEAAQTETDTAEALPELAPTDLPAIE 253
Query: 164 -----FCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
F + ++IV+ G S G A+ P ++ A N + M +
Sbjct: 254 AHAAEFDNPEGKPMVSIVLIDNGRSPIG-LEALAAFPYPLSFAVDPNSDGAAEAMARYRA 312
Query: 219 KGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAML 278
G E ++ L + ++ VM G L
Sbjct: 313 AGFEVLILTD---------------LPQGASAADTETTMQTLFAELPEAVAVMEGTGTGL 357
Query: 279 LSNKESAEVIFKEFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVD 333
S++E+AE + + GLL F G + L + +P ++ D D
Sbjct: 358 QSSREAAEQLAPILKETGHGLLMFPKG---LDTASKLIAREGVPTAT--IFRDFDSDGQT 412
Query: 334 RDKIREKLKGLEEIA-RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
IR L A R G I + E++ + W Q+ V V++ P+S + K
Sbjct: 413 ATVIRRFLDQGAFKASRLEGGVIMLGRLRAETVSALLIWGLQDRVSQVALAPVSAVLKAG 472
Query: 393 SP 394
+
Sbjct: 473 NE 474
>gi|99080983|ref|YP_613137.1| hypothetical protein TM1040_1142 [Ruegeria sp. TM1040]
gi|99037263|gb|ABF63875.1| hypothetical protein TM1040_1142 [Ruegeria sp. TM1040]
Length = 519
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/369 (13%), Positives = 108/369 (29%), Gaps = 43/369 (11%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
S + IP + A ++ + + + +
Sbjct: 174 SDLPLQAPDAEIPTPDLSTEADPAPLRQETLQVEAPDIGTPPDVTASPVLTTPPVRSLTP 233
Query: 107 QNDISGKTVVNK---------PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+ + N + ++ P+I R++ + A + +
Sbjct: 234 SDPVEDNAGANGGVRIADLPQASEDPETNAGPSIGTRVLPLTERDTTGADASSAADSSAA 293
Query: 158 P--AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
P + ++IV+ + A+ P +T + MK
Sbjct: 294 PFVRNSEPANPEPGLPLMSIVL--VEEEGAVGAEALEDFPYPLTFTIDPSDPDAVARMKA 351
Query: 216 AKKKGQEAIL--QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNY 273
+ G E ++ +P + Q + R G++
Sbjct: 352 RRAAGFEVMVLADLPREGQ-----------------PQDAETAMPVWFDRLPEAVGILEG 394
Query: 274 RGAMLLSNKESAEVIFKEFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-- 329
+ + N+ A+ + GL+ D+G N +A + +P V ++ D
Sbjct: 395 IDSGVQGNRALADQVASIAGDLGYGLVLQDNG---LNTVHKMALRDGIPSGV--VFRDFD 449
Query: 330 -DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC- 387
D +R L + G I + ++I + W Q+ V++VP+S
Sbjct: 450 GAGQDPRAMRRFLDQAAFRSGQEGAVIMLGRLKPDTISALLIWGLQDRASSVALVPISTS 509
Query: 388 LAKLSSPSS 396
L +L P S
Sbjct: 510 LKRLLEPVS 518
>gi|254440542|ref|ZP_05054036.1| Divergent polysaccharide deacetylase family [Octadecabacter
antarcticus 307]
gi|198255988|gb|EDY80302.1| Divergent polysaccharide deacetylase family [Octadecabacter
antarcticus 307]
Length = 488
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/376 (15%), Positives = 112/376 (29%), Gaps = 41/376 (10%)
Query: 40 LSIYILISHAFVGTISEMIPYSVIREIAP----IPLTIPLNIEDKQSPSKRD--NNTVCN 93
L+ +S A + + P +V+ E + + P +E P+ + N
Sbjct: 131 LAPETPVSEADLTISTTPAPPTVVVEPEVDEGFVVVDEPTALEVPVQPANDTFVVDLGAN 190
Query: 94 QLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI--------DSLPTIEERLILGLSKKELL 145
D P+ + + ER+ ++ L
Sbjct: 191 SDTAPEGLDDVAADPPADEGLAAVVPSEEPPVVPRLLLQGGGNTLLSERVSGVTVRRPLE 250
Query: 146 AKNKVGREDTEVPAMDKNFCSNA-------SGARIAIV-VSGLGISQTGTQRAINLLPAN 197
+ + +TE A S ++IV + S + A+ L
Sbjct: 251 DEAVAAQGETEAATQMNALVDFAAASGDVGSKPLLSIVLIDD--GSMSAAAAALAGLSFP 308
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
+T+A + M + G E + + + V T + + + L
Sbjct: 309 VTIALDPGQDDARALMAMYRDDGFEVAV--------LAKLPKGALPSDVEITFESVFSTL 360
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
S+ V++ L S++ A+ A +G F G N+ A +
Sbjct: 361 PESIA-------VLDIGNGGLHSDRNLADQAMNILASQGRGFVTVGQ-GLNMAGRAAEQA 412
Query: 318 NLPYMVADLYLDDQVDRDKIREKL-KGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEH 376
+P V LD ++ + AR + V ++I + W
Sbjct: 413 GVPVAVVFRDLDSDGQDARVVRRFVDQAAFRARQESGVVLVGRVRADTISALILWGSANQ 472
Query: 377 VRDVSVVPLSCLAKLS 392
V++VPLS +
Sbjct: 473 DEQVAIVPLSAILNAQ 488
>gi|114764292|ref|ZP_01443520.1| hypothetical protein 1100011001356_R2601_25206 [Pelagibaca
bermudensis HTCC2601]
gi|114543240|gb|EAU46257.1| hypothetical protein R2601_25206 [Roseovarius sp. HTCC2601]
Length = 586
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/376 (13%), Positives = 103/376 (27%), Gaps = 55/376 (14%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+++ P + AP P P + D+ + + D+ Q + + T
Sbjct: 224 TDIPPEAETALDAPAPPATPDIDTPSMEMASADSPARRDSVLPDAPQDEAAPEVSTQTPT 283
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT------------EVPA--- 159
D+LP + S+ + +G +P+
Sbjct: 284 PPLPAPLVPGEDALPRVSTLPGSPTSETAGAGRPAIGTPAGSLADRGAGESASRLPSIGE 343
Query: 160 ----------------------MDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
+ R+AIV+ G G + P
Sbjct: 344 AAPAEPTPAPEAAPSELSPLERYAVPTEAEDDAPRMAIVLIDDGTGPLGPD-TVGEFPFA 402
Query: 198 ITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRL 257
++ A ++ + + G E + + + L
Sbjct: 403 VSFAIPASHPDAAATAQGYRDAGFEVLA---------------IAGVPEGAQATDVEVTL 447
Query: 258 RYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKL 317
SL VM G L + + +E + G LA +
Sbjct: 448 EGSLGAVPEAVAVMEAPGDGLQATRAISEQAAQYLGASGHGLLMQPKGLNT-GEALARRE 506
Query: 318 NLPYMVADLYLDDQ-VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEH 376
+P + D + D +R L AR G + + +++ + W Q+
Sbjct: 507 AVPTVTVFRDFDGEGQDPRVMRRFLDQAAFKARQEGAVVMLGRLRADTVSALLLWGLQDR 566
Query: 377 VRDVSVVPLSCLAKLS 392
V++VP+S + + S
Sbjct: 567 ASSVALVPISLVLRES 582
>gi|149203714|ref|ZP_01880683.1| hypothetical protein RTM1035_06598 [Roseovarius sp. TM1035]
gi|149142831|gb|EDM30873.1| hypothetical protein RTM1035_06598 [Roseovarius sp. TM1035]
Length = 477
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/349 (14%), Positives = 98/349 (28%), Gaps = 38/349 (10%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP-SKRDNNTVCNQLKNDSSQHDGQIQ 107
A SE I S IP SP ++ + +
Sbjct: 158 APEAGQSESIFPSEEPAPVLIPDATDGEGVADLSPEAEAQAEVAPVPEADAETVAKTLPA 217
Query: 108 NDISGKTV--VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
G V + D P + E + + + L +N+V F
Sbjct: 218 LGTIGNRAEGVTTNRLPSLGDPAPEVAEAIAEPEAAEGALVRNRV------------AFD 265
Query: 166 SNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
+ +AI++ G S G A+ P + A + + + G E +
Sbjct: 266 NPEGKPLMAIILMDDGQSPIGI-EALQSFPYPLNFAVDVTWSGAADAAERYRAAGFEVLA 324
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESA 285
L + ++ + V+ GA L S++E+
Sbjct: 325 ---------------MADLPEGARPEDAEVAMQAWFTQVPQAVAVLEGAGAGLQSSREAT 369
Query: 286 EVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD---DQVDRDKIREKLK 342
+ + G + N + L + +P L+ D + IR L
Sbjct: 370 AQLAPILKESGHGLV-MHPNGLNTAQKLIAREGVPSAS--LFRDFDGQGQNVAAIRRFLD 426
Query: 343 GLEEIARTTGQ-AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A I + ++I + W + V++ P+S + +
Sbjct: 427 QAAMRADQQEDGVIMLGRLRADTISALLLWGLADRAASVALAPVSAVLR 475
>gi|163746562|ref|ZP_02153920.1| hypothetical protein OIHEL45_14195 [Oceanibulbus indolifex HEL-45]
gi|161380447|gb|EDQ04858.1| hypothetical protein OIHEL45_14195 [Oceanibulbus indolifex HEL-45]
Length = 520
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/323 (14%), Positives = 100/323 (30%), Gaps = 35/323 (10%)
Query: 69 IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSL 128
+ +E+ ++ + + + + + SG V+N+P + D
Sbjct: 227 VEAEASAPVEEPEAETTSEPEETVAASRPAIGTPAATLADRNSG-VVINRPGADIATDGD 285
Query: 129 PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQ 188
I + + ++ G+ V +D A A +A
Sbjct: 286 AEIVIEDPRPVVVNSIASEQVEGKPLMSVVLIDDGTSVTAGSAGLA-------------- 331
Query: 189 RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
A+ P ++ A S + ++ ++ G E + M + D+ T
Sbjct: 332 -ALRSFPYPLSFAVDSGLPNAAERVEIYREAGFEVLA---MVDLPQGAQPSDAETAFA-- 385
Query: 249 TVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRN 308
+L R V+ + ++ + + A+ G
Sbjct: 386 ----------ATLDRIGPVVAVLEGTESGFQGSRALTDQVTDILAQSGHGLVTQDKGLNT 435
Query: 309 LTRVLAPKLNLPY--MVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
+ LA K +P + D + IR L A G I + +++
Sbjct: 436 M-PKLARKAGVPADPVFRD-FDSKDQTARVIRRFLDQAAFRAGQEGAVIMLGRLRPDTVS 493
Query: 367 VISQWLQQEHVRDVSVVPLSCLA 389
+ W Q+ + DV++VP+S +
Sbjct: 494 ALLLWGLQDRINDVALVPISAVL 516
>gi|254450366|ref|ZP_05063803.1| YibQ protein [Octadecabacter antarcticus 238]
gi|198264772|gb|EDY89042.1| YibQ protein [Octadecabacter antarcticus 238]
Length = 434
Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/334 (14%), Positives = 102/334 (30%), Gaps = 35/334 (10%)
Query: 75 LNIEDKQSPSKRDN-----NTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI--DS 127
+ D P D +++ + + SG + P
Sbjct: 120 PAVSDVAVPPSEDTFVVDLGAAPEGIEDAPTDQPAD-EVLASGTQSEDAPAIPRLQLQGG 178
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTEVPAM-----DKNFCSNASGAR--IAIV-VSG 179
T+ G++ + E+TE A D S G++ ++IV +
Sbjct: 179 ENTLLAERATGVTVRRPTGDAVAAPEETETTAQINALLDFAATSGDDGSKPLMSIVLIDD 238
Query: 180 LGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNED 239
S + A+ L +T+A + M + G E + + +
Sbjct: 239 --GSMSAAAAALAGLAFPVTIALDPLQENASALMARYRDDGFEVAV--------LAKLPE 288
Query: 240 DSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLF 299
+ V T + + + L V++ L +++ + + A +G F
Sbjct: 289 GAVPSDVEITFESVFSTL-------PETIAVLDIGNGGLQTHRAVTDQVMNVLASQGRGF 341
Query: 300 FDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL-KGLEEIARTTGQAIGVA 358
S N+ A + +P V LDD ++ + R + V
Sbjct: 342 V-TMSQGLNMAVRAAEQAGVPAAVVYTDLDDDDQDARVVRRFVDQAAFRTRQESGVVLVG 400
Query: 359 VAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
++I + W +++VPLS + +
Sbjct: 401 RMRPDTISALILWGSTSQDDQIAIVPLSAVLRAQ 434
>gi|289806944|ref|ZP_06537573.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 48
Score = 58.1 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 5/47 (10%), Positives = 17/47 (36%)
Query: 247 TQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFA 293
+ ++ +R ++ G+ N+ G+ + S+ +
Sbjct: 1 DMSSDEIERIIREAVNNVPYAVGLNNHMGSAMTSSLFGMTKSLQALE 47
>gi|84503093|ref|ZP_01001189.1| hypothetical protein OB2597_01432 [Oceanicola batsensis HTCC2597]
gi|84388637|gb|EAQ01509.1| hypothetical protein OB2597_01432 [Oceanicola batsensis HTCC2597]
Length = 779
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 57/335 (17%), Positives = 99/335 (29%), Gaps = 29/335 (8%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
AP T + S ++ + + D + V +P
Sbjct: 467 APASATQTDEAAPRPSAPVTEDPVTEDPVTEDPGLAQRAARTAPDSGAVDPRPAMPGEPA 526
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK---NFCSNASGARIAIV-VSGLGI 182
++ + + P +D+ F + A ++IV +
Sbjct: 527 LRLVETAPVVPLSDPDAAPDASAGAAPEAVGPPIDRFAQPFDNPADMPLVSIVLIDD--- 583
Query: 183 SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
G P +++A M+ ++ G E +
Sbjct: 584 -GRGDASLPADFPYPLSIAIPVTRPDAPEAMRRYREGGYEVLA---------------LA 627
Query: 243 TLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAK--RGLLFF 300
+ T L R GV+ G L S + E + + GLL F
Sbjct: 628 GVPAGATPADLEAAAGDWFTRLDQVVGVIETPGRGLQSGRAMGERLAAILEESGHGLLLF 687
Query: 301 DDGSSPRNLTRVLAPKLNLPYMVADLYLDDQ-VDRDKIREKLKGLEEIARTTGQAIGVAV 359
+G + R LA + +P LD + IR L A GQ I VA
Sbjct: 688 PEG---LDTARKLATRRGVPAATVFRDLDSEGQSATVIRRFLDNSAFKAGIEGQVILVAR 744
Query: 360 AFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
E+IE + W + V++ P+S K ++P
Sbjct: 745 LRPETIEALLVWGLADRAGRVALAPVSHALKAAAP 779
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 12/127 (9%), Positives = 28/127 (22%), Gaps = 2/127 (1%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ 107
P + + E A P E + + + + +
Sbjct: 354 EEPAPERPAPGPVAGVEEPASGEPASPPVAEAGDAARDAPASATIAEWRESAPDAPAPAS 413
Query: 108 NDISGKTV--VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ SG V ++ P + S++ A
Sbjct: 414 DASSGAPVPPAAGTAPASEAGDAPLAAPSVQGTDSQEAADEDPSATVAGLAPDAPASATQ 473
Query: 166 SNASGAR 172
++ + R
Sbjct: 474 TDEAAPR 480
>gi|261415081|ref|YP_003248764.1| hypothetical protein Fisuc_0670 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371537|gb|ACX74282.1| hypothetical protein Fisuc_0670 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328102|gb|ADL27303.1| conserved domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 369
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 76/208 (36%), Gaps = 15/208 (7%)
Query: 191 INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTV 250
+N L L G + + K +E +L + M++ + + + L++ T
Sbjct: 171 LNSLDFPFDLLIPPFGLNESFYKDLDKIHNKEIVLWLAMESTKLNQVHNKLHPLRIHHTA 230
Query: 251 QQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLT 310
+Q+ + + + G+ G + +K+ + I K K + F D R +
Sbjct: 231 EQIEETIDSAKKVLPSAAGIATRYGEQAVKHKQLLQAILKPTDKYNMWFMDLSKEDRTVV 290
Query: 311 RVLAPKLNLPYMVADLYLDDQVD---RDKIREKLKGLEEIARTTGQAIGVAVAFDES--- 364
L + +A + + + D + +KL+ A +G +I + +
Sbjct: 291 PQTCKDLKITCKIA--FPYNPENSSVEDYVHQKLRE----APKSGISIMI---LPLTEQN 341
Query: 365 IEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+ I ++ + ++V LS L
Sbjct: 342 LSKIEDIAKKAAKQGTTLVELSTLLNSK 369
>gi|85703589|ref|ZP_01034693.1| hypothetical protein ROS217_22647 [Roseovarius sp. 217]
gi|85672517|gb|EAQ27374.1| hypothetical protein ROS217_22647 [Roseovarius sp. 217]
Length = 481
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 49/334 (14%), Positives = 100/334 (29%), Gaps = 39/334 (11%)
Query: 65 EIAPIPLTIPLNIEDKQ----SPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
E P P+ IP + SP ++++ I +
Sbjct: 177 EEEPAPVLIPEASDGDDMTDMSPEAEAQAATATAPEDETVSKTLPALGTIGNRADGVTTN 236
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
R S+ E + ++++ LA+N+V F + +AI++
Sbjct: 237 RLPSLADPAPEVEAAVEPVTQEGALARNRV------------AFDNPEGKPLMAIILMDD 284
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDD 240
G S G A+ P + A + + G E +
Sbjct: 285 GKSPIG-LEALQSFPYPLNFAVDVGWPGAAAAAERYRAAGFEVLA--------------- 328
Query: 241 SYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFF 300
L + ++ + V+ G L S++E++ + + G
Sbjct: 329 MTDLPEGARPEDAEVAMQAWFAQVPQAVAVLEGTGTGLQSSREASAQLAPILKESGHGLV 388
Query: 301 DDGSSPR--NLTRVLAPKLNLPYMVADLYLDDQ-VDRDKIREKLKGLEEIA-RTTGQAIG 356
P N + L + +P D + + IR L A + I
Sbjct: 389 ---MHPNGLNTAQKLIAREGVPSASLFRDFDGEGQNAAAIRRFLDQAAMKADQQEEGVIM 445
Query: 357 VAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ ++I + W Q+ V++ P+S + +
Sbjct: 446 LGRMRADTISALLLWGLQDRAASVALAPVSAVLR 479
>gi|84515598|ref|ZP_01002960.1| hypothetical protein SKA53_03031 [Loktanella vestfoldensis SKA53]
gi|84510881|gb|EAQ07336.1| hypothetical protein SKA53_03031 [Loktanella vestfoldensis SKA53]
Length = 442
Score = 52.7 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 42/327 (12%), Positives = 91/327 (27%), Gaps = 26/327 (7%)
Query: 70 PLTIPLNIEDKQ----SPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
+ I Q ++D V + D + + + ++
Sbjct: 129 TVMPDAPITPPQAPAQPAPEQDLPVVTLPAPVPPALQDTPAEPLPAPQVRPQTSPSASLP 188
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQT 185
S + G + + +F A IA+V+ +
Sbjct: 189 QSTADVRVNRPRTAPAAGPEEPALDGDLASPLLRYAADFDYAADLPMIAVVLMDNALILD 248
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK 245
++ LP T+ + + M+ + G E +LQ + L
Sbjct: 249 APD-VLSGLPFVPTIVLNAAAADVTARMRAYRAAGIEVLLQA----------DLPQGAL- 296
Query: 246 VTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSS 305
+ + + + ++ A+ + G F +
Sbjct: 297 ----PSDVETTYVGAFGLVPEAIAIFSDGTGPEAQDRMLADQALRLIGDEGRGFV---TL 349
Query: 306 PRNLTRVLAPKL--NLPYMVADLYLD-DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
PR + L +P +D RD I L+ AR +G + +
Sbjct: 350 PRGMGGALRNITADGVPVAQITRDIDGAGETRDAIERSLQQAALRARQSGHVVLLGRTTP 409
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLA 389
E++ I W ++ +S+ P+S +
Sbjct: 410 ETLAAIRNWAERSDPSQISLAPVSAIL 436
>gi|294677878|ref|YP_003578493.1| hypothetical protein RCAP_rcc02356 [Rhodobacter capsulatus SB 1003]
gi|294476698|gb|ADE86086.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
Length = 497
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/343 (13%), Positives = 85/343 (24%), Gaps = 31/343 (9%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P E AP P+ + S
Sbjct: 144 AAPDLPPAETAPAPVPGGEITLMPDGALVPPGPVRPRVIVPGQSGSGQGGPGAGFASAEG 203
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM-------DKNFCSNAS 169
K R + S P G+ +A A F
Sbjct: 204 TKVNRLPQVGSAPQGSSVPPSGVPVTPFVADPVPPAAAPAPEATGPALTRFGAAFVEKPG 263
Query: 170 GARIAIVVSGLGISQTGTQ-RAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
+ +++ +G + G + I L +T+ + + + G E +
Sbjct: 264 KPYVTVLLVDVGTTAGGLDAQTIAALGNWVTVVLDPAAPGVTEAAESYRAAGLEVAMLA- 322
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
L Q L L R ++ +L
Sbjct: 323 -------------GPLPAGAVAQDLEVALAAWQRAVPQAVALVEPETPVLQGKAPLLAQA 369
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLN-LPYMVADLYLDDQVDRDK-IREKLKGLEE 346
K A G+ + + P + A +P LD + D+ I L
Sbjct: 370 EKALAAEGMAYV---TQPGGIG---ARATGDVPRAGIFRVLDTRRDKAAVITRTLDRAGF 423
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
A G + + A+ ES+ ++ W + ++ PLS L
Sbjct: 424 EAARDGATVVMLSAWPESVAGLTAWAAE-EGAKYNLAPLSALI 465
>gi|260577284|ref|ZP_05845258.1| protein of unknown function DUF610 YibQ [Rhodobacter sp. SW2]
gi|259020528|gb|EEW23850.1| protein of unknown function DUF610 YibQ [Rhodobacter sp. SW2]
Length = 362
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 87/282 (30%), Gaps = 23/282 (8%)
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED--TEVPAMDKNFCSNASG 170
+T + +P + +L RL + ++ T + + F + ++
Sbjct: 96 QTAILRPVPALETQALDVTANRLPRIGDAEAAPPAETALPDEDQTALQRFARAFENPSAK 155
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
A+++ G + + LP ++ A + QE I M
Sbjct: 156 PMFALILIDTG-GPDVDRTGLASLPFPVSFAIDPAARDAATAAAIYRAADQEVI----ML 210
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK 290
A T L + + V++ +N+ A +
Sbjct: 211 ATGIPQ----------GATASDLAVSFQANAAALPESVAVLDLEEGGFQTNRPLATEVVP 260
Query: 291 EFAK--RGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-DQVDRDKIREKLKGLEEI 347
RGL+ +D G + +A + L + LD +R L
Sbjct: 261 VIKDIGRGLITWDKGLNA---GDQVARREGLAACMVFRRLDGAGESVPTMRRYLDRAAFK 317
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
A G+ V ++++ + +W + V++ P+S +
Sbjct: 318 AAQDGRVTVVGTTNPDTVKALLEWTVEGRAASVALAPISAVL 359
>gi|261885967|ref|ZP_06010006.1| putative periplasmic protein [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 51
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKL 391
+ A+ G AI + + + E I + ++ ++DV VV L + L
Sbjct: 3 AIKKAKKNGFAIAIGHPYKVTFETI-KVAKKTILKDVEVVYLKDIYGL 49
>gi|144898470|emb|CAM75334.1| hypothetical protein MGR_1654 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 96
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 292 FAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTT 351
+RGLL+ +G+ +A +LD +V RD + + K + + R
Sbjct: 1 MKERGLLYVGNGAEAEPK-PPVAVLGG--------WLDGEVFRDAVESRQKSMAGLVREK 51
Query: 352 GQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCL 388
G +A A ++E + WL V++ P+S L
Sbjct: 52 GSRAVLASARPATLESMLPWLGSLTAEGVTLAPVSAL 88
>gi|89069547|ref|ZP_01156891.1| hypothetical protein OG2516_03188 [Oceanicola granulosus HTCC2516]
gi|89044882|gb|EAR50972.1| hypothetical protein OG2516_03188 [Oceanicola granulosus HTCC2516]
Length = 710
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 49/342 (14%), Positives = 104/342 (30%), Gaps = 23/342 (6%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT + + + L + +P+ ++ ++ +
Sbjct: 386 GTEDDTLDAAPEAGAPAATAPPGLAAPAEDAPADVATAPAAPPPPDEEQVETIVVEVAPA 445
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
V ++P S +L + + G + + + T + A + +
Sbjct: 446 EPAVPDEPETPASRFALLSESGSTLPGQPVTPVTETPEPEADATALEAYAAPYEPDGRPM 505
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA--ILQIPM 229
I++ + G A+ LP +T+A + +G E + ++P
Sbjct: 506 MSIILLDD--GALPGAAAALAGLPVAVTVAVDPAHADAAALAATYRAQGFEVGVLARVP- 562
Query: 230 QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIF 289
T Q + + + + + G L N+ + E
Sbjct: 563 ----------------PGATPQDVEVAMEVAFSAVPEAVILFDAGGDGLQGNRAALEQTT 606
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD-DQVDRDKIREKLKGLEEIA 348
A G + N A + +P + LD D + IR L+ A
Sbjct: 607 AALAADGRGLV-AYAEGLNSGVRAAERAGVPAIEVYRDLDGDGQEARVIRRFLEQAAFRA 665
Query: 349 RTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
R + +A ++I ++ W + V+V P+S L K
Sbjct: 666 RQESGVVVMARVRPDTISALNLWGTAQREGQVAVAPVSALLK 707
>gi|167538573|ref|XP_001750949.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770537|gb|EDQ84225.1| predicted protein [Monosiga brevicollis MX1]
Length = 1536
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 34/132 (25%), Gaps = 7/132 (5%)
Query: 48 HAFVGTISEMIPYSVIREIAP------IPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSS 100
A S V+ A P P +E + P + + +
Sbjct: 1233 EAPTADSSAAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPA 1292
Query: 101 QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
++ + VV P + P + ++ + K L + + P
Sbjct: 1293 AKPPLVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPA 1352
Query: 161 DKNFCSNASGAR 172
K A+
Sbjct: 1353 AKPPVVEPPAAK 1364
Score = 44.7 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 34/128 (26%), Gaps = 1/128 (0%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQI 106
+ P + + P P +E + P + L + +
Sbjct: 1249 EPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVV 1308
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ + VV P + P + L+ + K + + + P K
Sbjct: 1309 EPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVV 1368
Query: 167 NASGARIA 174
+ + A
Sbjct: 1369 EPTATQGA 1376
Score = 44.3 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 33/122 (27%), Gaps = 2/122 (1%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCN-QLKNDSSQHDGQIQNDI 110
+P + R AP E + D++ + + ++
Sbjct: 1203 DEVAPVPVAKPRPEAPASEVAKPKTEPVDAEAPTADSSAAAKPPVVEPPAAKPPVVEPPA 1262
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ VV P + P + ++ + K L + + P K
Sbjct: 1263 AKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPA 1322
Query: 171 AR 172
A+
Sbjct: 1323 AK 1324
Score = 43.5 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 29/118 (24%), Gaps = 1/118 (0%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ P+ P + P + + + ++ +
Sbjct: 1217 APASEVAKPKTEPVDAEAPTADSSAAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPP 1276
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
VV P + P + L+ + K + + + P K A+
Sbjct: 1277 VVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAK 1334
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 32/115 (27%), Gaps = 3/115 (2%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV--VNK 118
S + E+AP+P+ P +K V + S + V +
Sbjct: 1200 STVDEVAPVPVAKPRPEAPASEVAKPKTEPVDAEAPTADSSAAAKPPVVEPPAAKPPVVE 1259
Query: 119 PTRSTSIDSLPTIEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P + ++ K + + + P K A+
Sbjct: 1260 PPAAKPPVVEPPAAKPPVVEPPAAKPPVVEPPAAKPPLVEPPAAKPPVVEPPAAK 1314
>gi|258516322|ref|YP_003192544.1| polysaccharide deacetylase [Desulfotomaculum acetoxidans DSM 771]
gi|257780027|gb|ACV63921.1| polysaccharide deacetylase [Desulfotomaculum acetoxidans DSM 771]
Length = 295
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 20/44 (45%)
Query: 347 IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+A+ AI + + +I+ + ++ R +V +S L K
Sbjct: 194 LAKAHNGAIVLMHPTEPTIKALPNIIKDLKDRGYELVTVSQLLK 237
>gi|296235069|ref|XP_002762739.1| PREDICTED: G-protein coupled receptor 64 isoform 9 [Callithrix
jacchus]
Length = 995
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 212 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 271
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 272 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 331
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 332 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 391
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 392 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 446
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 447 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 497
>gi|296235067|ref|XP_002762738.1| PREDICTED: G-protein coupled receptor 64 isoform 8 [Callithrix
jacchus]
Length = 1003
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 220 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 279
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 280 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 339
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 340 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 399
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 400 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 454
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 455 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 505
>gi|296235065|ref|XP_002762737.1| PREDICTED: G-protein coupled receptor 64 isoform 7 [Callithrix
jacchus]
Length = 952
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 220 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 279
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 280 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 339
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 340 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 399
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 400 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 454
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 455 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 505
>gi|296235063|ref|XP_002762736.1| PREDICTED: G-protein coupled receptor 64 isoform 6 [Callithrix
jacchus]
Length = 981
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 198 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 257
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 258 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 317
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 318 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 377
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 378 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 432
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 433 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 483
>gi|296235061|ref|XP_002762735.1| PREDICTED: G-protein coupled receptor 64 isoform 5 [Callithrix
jacchus]
Length = 989
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 206 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 265
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 266 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 325
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 326 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 385
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 386 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 440
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 441 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 491
>gi|296235059|ref|XP_002762734.1| PREDICTED: G-protein coupled receptor 64 isoform 4 [Callithrix
jacchus]
Length = 997
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 214 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 273
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 274 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 333
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 334 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 393
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 394 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 448
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 449 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 499
>gi|296235057|ref|XP_002762733.1| PREDICTED: G-protein coupled receptor 64 isoform 3 [Callithrix
jacchus]
Length = 1019
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 236 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 295
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 296 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 355
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 356 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 415
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 416 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 470
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 471 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 521
>gi|296235055|ref|XP_002762732.1| PREDICTED: G-protein coupled receptor 64 isoform 2 [Callithrix
jacchus]
Length = 968
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 236 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 295
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 296 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 355
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 356 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 415
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 416 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 470
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 471 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 521
>gi|296235053|ref|XP_002762731.1| PREDICTED: G-protein coupled receptor 64 isoform 1 [Callithrix
jacchus]
Length = 1005
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 38/295 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 222 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 281
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 282 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 341
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 342 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 401
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAK 217
AM R+ VV +G+ + + I+L ++ LA N + + A+
Sbjct: 402 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVIRVNASDFNTTTFAAQ 456
Query: 218 KKGQEAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N TL + +L +R+ ++
Sbjct: 457 DPAN---LQVSLETQA-PENSIGKITLPSSLMSNLPANDMELASRVLFNFFETPA 507
>gi|260831194|ref|XP_002610544.1| hypothetical protein BRAFLDRAFT_202503 [Branchiostoma floridae]
gi|229295911|gb|EEN66554.1| hypothetical protein BRAFLDRAFT_202503 [Branchiostoma floridae]
Length = 355
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 28/120 (23%), Gaps = 1/120 (0%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
T P P P ++E P+ + DS ++
Sbjct: 77 RETEKHKEPQLKTEPPEPSPRETKPHLEPTLKPAFPPIQAAPSVSSQDSPMAASGGESPA 136
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
G + P + D + G K K+G PA +
Sbjct: 137 -GIIFPSAPKPDSPPDESSQDSFAPVQGPEPPPANQKPKIGFGLKFAPATSSPAQAPPKR 195
>gi|318062012|ref|ZP_07980733.1| putative acyltransferase [Streptomyces sp. SA3_actG]
Length = 526
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 44/169 (26%), Gaps = 4/169 (2%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
PL +R+ +SR + L+ + G E Y +
Sbjct: 18 SPLPDAAERRRLREGLALSRAQVAAALGVSTSTLAGWEA-GRDPSGQTREKYAYFLDGAH 76
Query: 67 A---PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
A P P D P ++ D ++ + +P R
Sbjct: 77 AKLHPTQDPEPQPEPDVLVPDTSAIGDGPGNAEDAEEGEDVEVLAVAEPCVLCGEPARHR 136
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ ++ L A+ + PA + ++ AR
Sbjct: 137 VAGYVQHLDPAECHPLPADSAPAEPEPSSTGRSAPARGRTPAASQPRAR 185
>gi|332206496|ref|XP_003252329.1| PREDICTED: protein piccolo [Nomascus leucogenys]
Length = 5141
Score = 45.8 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 31/119 (26%), Gaps = 6/119 (5%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P P P + + P+K + L +Q G ++ +
Sbjct: 303 KPPIQQPTPGKPPAQQPGPEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 118 KPTRSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P E+ L K L VG+ + P K +
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSLEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|291407162|ref|XP_002719982.1| PREDICTED: G protein-coupled receptor 64 isoform 4 [Oryctolagus
cuniculus]
Length = 986
Score = 45.8 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 82/224 (36%), Gaps = 34/224 (15%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + +S+
Sbjct: 290 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKTSK---------- 333
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
G ++N + S + + +E+ L LG + + + N+V + PA+
Sbjct: 334 GDNIINITSVSDLENQVSQMEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 390
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 391 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 445
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 446 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 488
>gi|291407160|ref|XP_002719981.1| PREDICTED: G protein-coupled receptor 64 isoform 3 [Oryctolagus
cuniculus]
Length = 1002
Score = 45.8 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 82/224 (36%), Gaps = 34/224 (15%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + +S+
Sbjct: 306 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKTSK---------- 349
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
G ++N + S + + +E+ L LG + + + N+V + PA+
Sbjct: 350 GDNIINITSVSDLENQVSQMEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 406
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 407 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 461
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 462 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 504
>gi|291407156|ref|XP_002719979.1| PREDICTED: G protein-coupled receptor 64 isoform 1 [Oryctolagus
cuniculus]
Length = 1016
Score = 45.8 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 82/224 (36%), Gaps = 34/224 (15%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + +S+
Sbjct: 320 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKTSK---------- 363
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
G ++N + S + + +E+ L LG + + + N+V + PA+
Sbjct: 364 GDNIINITSVSDLENQVSQMEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 420
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 421 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 475
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 476 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 518
>gi|154284770|ref|XP_001543180.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406821|gb|EDN02362.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 530
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 29/126 (23%), Gaps = 5/126 (3%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + + P P + P D ++
Sbjct: 332 GNPPPETKPPTGEDPSDKPGNKPPTDDKGNKPPTDDKPGNEPPTDDEPDNKPPTDDKGNK 391
Query: 112 GKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLA--KNKVGREDTEVPAMDKNFCS 166
T N+P D+ P +E ++ + G +TE+P
Sbjct: 392 PPTDDKPGNEPPTDDKPDNEPPTDETPGNQPPPEDHEPGCETPTGYPETELPTPTNPPVV 451
Query: 167 NASGAR 172
+
Sbjct: 452 KPVDPQ 457
>gi|296235071|ref|XP_002762740.1| PREDICTED: G-protein coupled receptor 64 isoform 10 [Callithrix
jacchus]
Length = 900
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 27/225 (12%)
Query: 1 MSIDLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI------YILISH--- 48
M DL P L SQ I + +F S Y +H
Sbjct: 206 MQCDLQDPIVCLADSPHGPPFSSSQSIPVVSRVTMFSQVPNAASFAKKPPDYSPATHNVP 265
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ +G + P + + +P SP + + + S
Sbjct: 266 SPIGDMHPPSPQPSALIASSPAIDMPPQSGTISSPMPQTHVSSTPPPVKASLSSPTVSAS 325
Query: 107 QNDISGKT------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVP 158
N ++ T +VN + S + + +E+ L LG + L + N+V + P
Sbjct: 326 VNVVTNSTHPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSKLLHSPP 385
Query: 159 AMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA 203
AM R+ VV +G+ + + I+L ++ LA
Sbjct: 386 AMLAPLAQ-----RLLKVVDDIGLQLNFSNKTISLTSPSLALAVI 425
>gi|302517350|ref|ZP_07269692.1| dihydrolipoamide S-succinyltransferase [Streptomyces sp. SPB78]
gi|302426245|gb|EFK98060.1| dihydrolipoamide S-succinyltransferase [Streptomyces sp. SPB78]
Length = 564
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 44/169 (26%), Gaps = 4/169 (2%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
PL +R+ +SR + L+ + G E Y +
Sbjct: 56 SPLPDAAERRRLREGLALSRAQVAAALGVSTSTLAGWEA-GRDPSGQTREKYAYFLDGAH 114
Query: 67 A---PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
A P P D P ++ D ++ + +P R
Sbjct: 115 AKLHPTQDPEPQPEPDVLVPDTSAIGDGPGNAEDAEEGEDVEVLAVAEPCVLCGEPARHR 174
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ ++ L A+ + PA + ++ AR
Sbjct: 175 VAGYVQHLDPAECHPLPADSAPAEPEPSSTGRSAPARGRTPAASQPRAR 223
>gi|239909119|ref|YP_002955861.1| thiol:disulfide interchange protein DsbD [Desulfovibrio magneticus
RS-1]
gi|239798986|dbj|BAH77975.1| thiol:disulfide interchange protein DsbD [Desulfovibrio magneticus
RS-1]
Length = 775
Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 46/154 (29%), Gaps = 2/154 (1%)
Query: 7 HPLRKKTPKRKSFYSQ-IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIRE 65
P + P+ S + +FLL C GLS+ + ++ A + P + R
Sbjct: 33 RPDQAVAPRTASRLRLLAFPTMAVFLLLCLAQAGLSVRLAVA-AGGAPGKAVQPAAATRS 91
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
+ + + D L S + + +S + V +
Sbjct: 92 PGKAAPSPETAVPQSAPAASPDAVASPAPLAGAPSPNAPATEQPLSPPSAVTPVVDAPDA 151
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
+ P + + + + + R P+
Sbjct: 152 AASPPVGGPDAASQEQLPAVLETALYRLPKGDPS 185
>gi|289672247|ref|ZP_06493137.1| hypothetical protein PsyrpsF_03330 [Pseudomonas syringae pv.
syringae FF5]
Length = 52
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 4/34 (11%), Positives = 14/34 (41%)
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+ + +++V+ + L + V + L +
Sbjct: 1 VIGHPYPVTLDVLERELPNLKAQGVEWIDLRSMI 34
>gi|73967669|ref|XP_859301.1| PREDICTED: similar to Bile-salt-activated lipase precursor (BAL)
(Bile-salt-stimulated lipase) (BSSL) (Carboxyl ester
lipase) (Sterol esterase) (Cholesterol esterase)
(Pancreatic lysophospholipase) isoform 3 [Canis
familiaris]
Length = 710
Score = 45.0 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 12/133 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G + AP P + + P+ ++ +
Sbjct: 585 PSGDSNAPPAPPSGDSNAPPA---PPSGDSNAPPAPPSGDSNAPPAPPSGDSN--APPAP 639
Query: 110 ISGKTVVNKPTRSTSIDS----LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG + N P S DS P + V + A
Sbjct: 640 PSGDS--NAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPV-PPSGDSNAPPAPPS 696
Query: 166 SNASGARIAIVVS 178
++ GA++ IV+
Sbjct: 697 EDSEGAQMPIVIG 709
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 23/122 (18%), Gaps = 9/122 (7%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P S P P + + P+ ++ D
Sbjct: 555 GDEATPAPPSGDSNATPA----PPSGDSNAPPAPPSGDSNA---PPAPPSGDSNAPPAPP 607
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN--KVGREDTEVPAMDKNFCSNAS 169
P + + P + + A +++
Sbjct: 608 SGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSN 667
Query: 170 GA 171
Sbjct: 668 AP 669
>gi|73967673|ref|XP_859370.1| PREDICTED: similar to Bile-salt-activated lipase precursor (BAL)
(Bile-salt-stimulated lipase) (BSSL) (Carboxyl ester
lipase) (Sterol esterase) (Cholesterol esterase)
(Pancreatic lysophospholipase) isoform 5 [Canis
familiaris]
Length = 709
Score = 45.0 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 12/133 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G + AP P + + P+ ++ +
Sbjct: 584 PSGDSNAPPAPPSGDSNAPPA---PPSGDSNAPPAPPSGDSNAPPAPPSGDSN--APPAP 638
Query: 110 ISGKTVVNKPTRSTSIDS----LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG + N P S DS P + V + A
Sbjct: 639 PSGDS--NAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPV-PPSGDSNAPPAPPS 695
Query: 166 SNASGARIAIVVS 178
++ GA++ IV+
Sbjct: 696 EDSEGAQMPIVIG 708
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 23/122 (18%), Gaps = 9/122 (7%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P S P P + + P+ ++ D
Sbjct: 554 GDEATPAPPSGDSNATPA----PPSGDSNAPPAPPSGDSNA---PPAPPSGDSNAPPAPP 606
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN--KVGREDTEVPAMDKNFCSNAS 169
P + + P + + A +++
Sbjct: 607 SGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSN 666
Query: 170 GA 171
Sbjct: 667 AP 668
>gi|73967671|ref|XP_859335.1| PREDICTED: similar to Bile-salt-activated lipase precursor (BAL)
(Bile-salt-stimulated lipase) (BSSL) (Carboxyl ester
lipase) (Sterol esterase) (Cholesterol esterase)
(Pancreatic lysophospholipase) isoform 4 [Canis
familiaris]
Length = 710
Score = 45.0 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 12/133 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G + AP P + + P+ ++ +
Sbjct: 585 PSGDSNAPPAPPSGDSNAPPA---PPSGDSNAPPAPPSGDSNAPPAPPSGDSN--APPAP 639
Query: 110 ISGKTVVNKPTRSTSIDS----LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG + N P S DS P + V + A
Sbjct: 640 PSGDS--NAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPV-PPSGDSNAPPAPPS 696
Query: 166 SNASGARIAIVVS 178
++ GA++ IV+
Sbjct: 697 EDSEGAQMPIVIG 709
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 23/122 (18%), Gaps = 9/122 (7%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P S P P + + P+ ++ D
Sbjct: 555 GDEATPAPPSGDSNATPA----PPSGDSNAPPAPPSGDSNA---PPAPPSGDSNAPPAPP 607
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN--KVGREDTEVPAMDKNFCSNAS 169
P + + P + + A +++
Sbjct: 608 SGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSN 667
Query: 170 GA 171
Sbjct: 668 AP 669
>gi|73967675|ref|XP_859406.1| PREDICTED: similar to Bile-salt-activated lipase precursor (BAL)
(Bile-salt-stimulated lipase) (BSSL) (Carboxyl ester
lipase) (Sterol esterase) (Cholesterol esterase)
(Pancreatic lysophospholipase) isoform 6 [Canis
familiaris]
Length = 715
Score = 45.0 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 12/133 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G + AP P + + P+ ++ +
Sbjct: 590 PSGDSNAPPAPPSGDSNAPPA---PPSGDSNAPPAPPSGDSNAPPAPPSGDSN--APPAP 644
Query: 110 ISGKTVVNKPTRSTSIDS----LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG + N P S DS P + V + A
Sbjct: 645 PSGDS--NAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPV-PPSGDSNAPPAPPS 701
Query: 166 SNASGARIAIVVS 178
++ GA++ IV+
Sbjct: 702 EDSEGAQMPIVIG 714
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 23/122 (18%), Gaps = 9/122 (7%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P S P P + + P+ ++ D
Sbjct: 560 GDEATPAPPSGDSNATPA----PPSGDSNAPPAPPSGDSNA---PPAPPSGDSNAPPAPP 612
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN--KVGREDTEVPAMDKNFCSNAS 169
P + + P + + A +++
Sbjct: 613 SGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSN 672
Query: 170 GA 171
Sbjct: 673 AP 674
>gi|57092243|ref|XP_548401.1| PREDICTED: similar to Bile-salt-activated lipase precursor (BAL)
(Bile-salt-stimulated lipase) (BSSL) (Carboxyl ester
lipase) (Sterol esterase) (Cholesterol esterase)
(Pancreatic lysophospholipase) isoform 1 [Canis
familiaris]
Length = 709
Score = 45.0 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 12/133 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G + AP P + + P+ ++ +
Sbjct: 584 PSGDSNAPPAPPSGDSNAPPA---PPSGDSNAPPAPPSGDSNAPPAPPSGDSN--APPAP 638
Query: 110 ISGKTVVNKPTRSTSIDS----LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG + N P S DS P + V + A
Sbjct: 639 PSGDS--NAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPV-PPSGDSNAPPAPPS 695
Query: 166 SNASGARIAIVVS 178
++ GA++ IV+
Sbjct: 696 EDSEGAQMPIVIG 708
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 23/122 (18%), Gaps = 9/122 (7%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P S P P + + P+ ++ D
Sbjct: 554 GDEATPAPPSGDSNATPA----PPSGDSNAPPAPPSGDSNA---PPAPPSGDSNAPPAPP 606
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN--KVGREDTEVPAMDKNFCSNAS 169
P + + P + + A +++
Sbjct: 607 SGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSNAPPAPPSGDSN 666
Query: 170 GA 171
Sbjct: 667 AP 668
>gi|297681174|ref|XP_002818341.1| PREDICTED: LOW QUALITY PROTEIN: protein piccolo-like [Pongo abelii]
Length = 5129
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 6/119 (5%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P P P + + + P+K + L +Q G ++ +
Sbjct: 303 KPPIQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 118 KPTR---STSIDSLPTIEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + + PT E+ L K L VG+ + P K +
Sbjct: 361 PPAQPVGPAKPPAQPTGSEKPSLEQPGPKALAQPPGVGKTPAQQPGQAKPPTQQVGTPK 419
>gi|289812073|ref|ZP_06542702.1| divergent polysaccharide deacetylase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 36
Score = 44.7 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 212 WMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQT 249
+A G E ++ +PM + E D TL+ +
Sbjct: 1 MATKAHNSGHEVLIHLPMAPLSKQPLEKD--TLRPDMS 36
>gi|134299796|ref|YP_001113292.1| polysaccharide deacetylase [Desulfotomaculum reducens MI-1]
gi|134052496|gb|ABO50467.1| polysaccharide deacetylase [Desulfotomaculum reducens MI-1]
Length = 249
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 328 LDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSC 387
+D Q I ++ + A G AI + D +++ + + ++Q V +
Sbjct: 176 IDWQRPAPAIIKQ--RVVSKAH-NG-AIVLMHPTDPTVKALPEMIKQLKSEGFEFVKVGE 231
Query: 388 LAK 390
+ +
Sbjct: 232 IIE 234
>gi|224367794|ref|YP_002601957.1| hypothetical protein HRM2_06790 [Desulfobacterium autotrophicum
HRM2]
gi|223690510|gb|ACN13793.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 250
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 55/185 (29%), Gaps = 9/185 (4%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M +++ ++ K + ++ + + L FI + H
Sbjct: 26 MGLNIRPERNRRKEKTRRTTNKTTPWIWIIFLTLLFIGAGTFVTFFFHGPGTVTPAPPKT 85
Query: 61 SVIREIAPIPLTIPLN----IEDKQSPSKRDNNTVCNQLKNDSS-----QHDGQIQNDIS 111
+ E API + + P +QL + + Q G +S
Sbjct: 86 AQAPETAPIKTEAKPTPDIAVARQPKPPAPVAQAEPSQLPSPAPHAAPLQRPGSRHQGLS 145
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ P S ++ T++ K + ++ + ++ S
Sbjct: 146 PQLSKAIPPSEPSPPAMGTLDSSPQPPAPKPNQVTGTEISVMEDANLTINAISWSTVPEK 205
Query: 172 RIAIV 176
R+A++
Sbjct: 206 RLAVI 210
>gi|158334108|ref|YP_001515280.1| hypothetical protein AM1_0924 [Acaryochloris marina MBIC11017]
gi|158304349|gb|ABW25966.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 988
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP--SKRDNNTVCNQLKNDSSQHDGQI 106
+ GTI AP P P+ P S L + S Q
Sbjct: 853 SPPGTIPGPTIPQPTPGPAPSPDVTPVPQPSTDPPSGSTSQPFPFPVPLPSPSPQPGKVP 912
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
++ S V T P + S ++ + E PA + +
Sbjct: 913 ESLPSPGEVPESGLPQTPAPKEPVSPGETVPSTSGEQSPPPTEKSPSPAERPAPQQQIKA 972
Query: 167 NAS 169
+
Sbjct: 973 PSR 975
>gi|226287962|gb|EEH43475.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 768
Score = 44.3 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 61/236 (25%), Gaps = 27/236 (11%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
T SE +P S R P E PS + + N + +
Sbjct: 178 TGSEAVPPSRSRNSPAKPCAKDQTSESLPPPSTKAPSKKSNSDVR-PATRPAAANHSSLE 236
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKK------ELLAKNKVGREDTEVPAMDKNFCS 166
V KP S ++ + + + + ++ +EVPA
Sbjct: 237 SPAVKKPKPSNTLQKASSQSKTREILKLQTSESTDPPHYPLPPPAQDKSEVPAKSDARNI 296
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
N+ R++I T I +PA + L + K E ++
Sbjct: 297 NSQLPRLSI--------STRPLSEIAFIPAK-----MKESSKLKLFHNLPIKNRYEKVMH 343
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+ + +Q + G G++ +
Sbjct: 344 RDLTPNIRQLDLGTPGEWTPSQKP-------KGPAPDSPFQTGKYRNMGSLFVDQD 392
>gi|332866247|ref|XP_001160384.2| PREDICTED: protein piccolo isoform 1 [Pan troglodytes]
Length = 5143
Score = 44.3 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 31/119 (26%), Gaps = 6/119 (5%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P P P + + + P+K + L +Q G ++ +
Sbjct: 303 KPPIQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 118 KPTRSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P E+ K L VG+ + P K +
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|194209578|ref|XP_001915278.1| PREDICTED: similar to piccolo [Equus caballus]
Length = 5117
Score = 44.3 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
S + A +P P + + + +Q G +
Sbjct: 301 PGPAKPSPTQPAAKLPAQPPATTKPATQQPRPKSPAQPPGPAKSPAQQPGPAKAASQQPG 360
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
P + + ++ AK + P + + A
Sbjct: 361 PAKPPPQQPGPAKPAPQQPGPAKPPPQQPGPAKPASQQPGPAKPPPQQPGPAKAP 415
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 25/118 (21%), Gaps = 5/118 (4%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIED---KQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
P A P P + + P+K Q G +
Sbjct: 370 GPAKPAPQQPGPAKPPPQQPGPAKPASQQPGPAKPPPQQP--GPAKAPPQQPGPAKPPPE 427
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
V P + P + ++ AK + P + A
Sbjct: 428 QPGPVKAPPQQPGPAKAPPQQPGPAKPAPQQPGPAKPPPQQPGPAKPPPQQPGPVKAP 485
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 12/123 (9%), Positives = 25/123 (20%), Gaps = 4/123 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK---NDSSQHDGQI 106
++ P K P + Q Q G
Sbjct: 394 PASQQPGPAKPPP-QQPGPAKAPPQQPGPAKPPPEQPGPVKAPPQQPGPAKAPPQQPGPA 452
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ P + P + + ++ AK + PA + +
Sbjct: 453 KPAPQQPGPAKPPPQQPGPAKPPPQQPGPVKAPPQQPGPAKPPPQQPGPAKPAPQQPGPA 512
Query: 167 NAS 169
+
Sbjct: 513 KPT 515
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 24/130 (18%), Gaps = 8/130 (6%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIED---KQSPSKRDN----NTVCNQLKNDSSQH 102
+ A P P + + P+K + ++
Sbjct: 325 PATQQPRPKSPAQPPGPAKSPAQQPGPAKAASQQPGPAKPPPQQPGPAKPAPQQPGPAKP 384
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV-GREDTEVPAMD 161
Q + P + P G +K V PA
Sbjct: 385 PPQQPGPAKPASQQPGPAKPPPQQPGPAKAPPQQPGPAKPPPEQPGPVKAPPQQPGPAKA 444
Query: 162 KNFCSNASGA 171
+
Sbjct: 445 PPQQPGPAKP 454
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 23/128 (17%), Gaps = 11/128 (8%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCN----QLKNDSSQHDG 104
A + ++ P P +SP+++ Q G
Sbjct: 313 AKLPAQPPATTKPATQQPRPKSPAQPPG--PAKSPAQQPGPAKAASQQPGPAKPPPQQPG 370
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK-NKVGREDTEVPAMDKN 163
P + P G +K PA
Sbjct: 371 P----AKPAPQQPGPAKPPPQQPGPAKPASQQPGPAKPPPQQPGPAKAPPQQPGPAKPPP 426
Query: 164 FCSNASGA 171
A
Sbjct: 427 EQPGPVKA 434
>gi|114614254|ref|XP_001160582.1| PREDICTED: piccolo isoform 3 [Pan troglodytes]
Length = 4865
Score = 43.9 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 31/119 (26%), Gaps = 6/119 (5%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P P P + + + P+K + L +Q G ++ +
Sbjct: 303 KPPIQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTK 360
Query: 118 KPTRSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P E+ K L VG+ + P K +
Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|225678959|gb|EEH17243.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 1072
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 59/236 (25%), Gaps = 27/236 (11%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
T SE +P S R P E PS + + N + +
Sbjct: 180 TGSEAVPPSRSRNSPAKPCAKDQTSESLPPPSTKAPSKKSNSDVR-PATRPAAANHSSLE 238
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKK------ELLAKNKVGREDTEVPAMDKNFCS 166
V KP S ++ + + + ++ +EVPA
Sbjct: 239 SPAVKKPKPSNTLQKASFQSKTREILKLQTSESTDPPHYPLPPPAQDKSEVPAKSDARNM 298
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
N+ R++I T I +PA + L + K E +
Sbjct: 299 NSQLPRLSI--------STRPLSEIAFIPAK-----MKESSKLKLFHNLPIKNRYEKAMH 345
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNK 282
+ + +Q + G G++ +
Sbjct: 346 RDLTPNIRQLDLGTPGEWTPSQKP-------KGPAPDSPFQTGTYRNMGSLFVDQD 394
>gi|131887405|ref|NP_001076483.1| hypothetical protein LOC100009645 [Danio rerio]
gi|124481588|gb|AAI33083.1| Zgc:158327 protein [Danio rerio]
Length = 1546
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 40/171 (23%), Gaps = 19/171 (11%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN- 117
P P++ P S + V ++ V
Sbjct: 1212 PPVSAPAPERPPVSAPAPERPPVSAPAPERPPVSAPAPERPPVSAPAPEHRSVPVPVRLL 1271
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVV 177
SLP L L + L R +PA + A R+A+
Sbjct: 1272 ALPAPPRRLSLPAPARLLALPAPPRRLSLPAPPRR--LALPAPARLLALPAPIRRLAL-- 1327
Query: 178 SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIP 228
R + L L+ R A + +L +P
Sbjct: 1328 -------PAPARLLALPAPPRRLS-LPAPP--RRLALPAPAR----LLSLP 1364
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 23/117 (19%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P P++ P S + V +
Sbjct: 1202 PPVSAPAPERPPVSAPAPERPPVSAPAPERPPVSAPAPERPPVSAPAPERPPVSAPAPEH 1261
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+ + L L L L +PA + A +A+
Sbjct: 1262 RSVPVPVRLLALPAPPRRLSLPAPARLLALPAPPRRLSLPAPPRRLALPAPARLLAL 1318
>gi|116050098|ref|YP_791088.1| cardiolipin synthase 2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296389426|ref|ZP_06878901.1| cardiolipin synthase 2 [Pseudomonas aeruginosa PAb1]
gi|115585319|gb|ABJ11334.1| putative phospholipase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 401
Score = 43.9 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 26/218 (11%)
Query: 176 VV--SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
++ +G A + + G + A+ + +
Sbjct: 41 IIFEDEVGRQLQEALSAAAERGVEVQVTVDGYGTASLSTDYLARLTAAGVRVHL------ 94
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG------AMLLSNKESAE- 286
+ L + + + L+R + R + G +NY + +
Sbjct: 95 ---FDPRPRLLGMRTNLFRRLHRKLVVIDRQQAFVGGINYGEDHLVRRGNMAKQDYAVRV 151
Query: 287 --VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ + L + + L A P V + D+ D I +
Sbjct: 152 EGPVVRDIRQACLALLEPDADYPPLRPSGA---GQPARVRLVIRDNDQSSDDIEREYLQA 208
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
AR + +A A+ + + L+ R V V
Sbjct: 209 IRQARRR---LLIANAYFFPGYRLLRELRDAARRGVRV 243
>gi|197725399|gb|ACH72900.1| AflB [Aspergillus ochraceoroseus]
Length = 1918
Score = 43.9 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 38/126 (30%), Gaps = 24/126 (19%)
Query: 195 PANITLAFAS---NGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT---- 247
P ITL A + ++ A +G+E + + M + + L +
Sbjct: 1057 PCEITLYTAPLRGDSKHPHAVLELAYHEGREVTMTLLMSPILGGQSRRPALELTMELIGG 1116
Query: 248 --------QTVQQLLNRLRYSL--------RRGTGYFGVMN-YRGAMLLSNKESAEVIFK 290
+ L+R+R G G+ + + G + ++ +
Sbjct: 1117 PMDSHMLQLSRGDYLDRVRRLYTQLWIEGPSHGPSSAGINSEFAGDRVTITADAVKAFLA 1176
Query: 291 EFAKRG 296
+ G
Sbjct: 1177 VIRQTG 1182
>gi|326775134|ref|ZP_08234399.1| amino acid adenylation domain protein [Streptomyces cf. griseus
XylebKG-1]
gi|326655467|gb|EGE40313.1| amino acid adenylation domain protein [Streptomyces cf. griseus
XylebKG-1]
Length = 3156
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 14/226 (6%)
Query: 6 NHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIRE 65
+ P+ + + R + + + I + + G + I
Sbjct: 322 STPVGDPIEANALARALAVGRAPGARAY---VGSVKTNIGHTESAAGIAGLIKTVLSIEH 378
Query: 66 IAPIP----LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN-DISGKTVVNKPT 120
P + I+ P + ++ + VV +
Sbjct: 379 RTIPPHINLENLNPAIDPAALPYEIPTRPTPWPEHEGPARAGVNSFGFGGTNAHVVLEEA 438
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
D+ P G L + E+ A ++ + A+G A+ + L
Sbjct: 439 PGPLPDTRPATSGA-SAGRRWSILPLSARNPDALKEMAAGIRSELAGANGP--AVTLDDL 495
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
G + ++ LP +++A+ S + + A+ ++
Sbjct: 496 GHTLAHRRQ---HLPERLSVAYTSRASLDEALAAHARGDAHPRVVH 538
>gi|160358754|sp|A2ASS6|TITIN_MOUSE RecName: Full=Titin; AltName: Full=Connectin
gi|123232571|emb|CAM24262.1| titin [Mus musculus]
gi|123232627|emb|CAM27059.1| titin [Mus musculus]
gi|123232651|emb|CAM23449.1| titin [Mus musculus]
Length = 35213
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 32/127 (25%), Gaps = 3/127 (2%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ +P ++E P P E P TV + + +
Sbjct: 12021 PKKPEATTVPVPEVQETIPEKTRPPKKPEATPVPVPEVQETVPEKTRPVGPPKKPEATTV 12080
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT---EVPAMDKNFCS 166
+ P ++ E + ++ + R + VP D+
Sbjct: 12081 SVPEVQETIPEKTRPAAPPKKPEATAVPETIPEKTRPEAPPKRPEATTVPVPEADQAVVP 12140
Query: 167 NASGARI 173
R+
Sbjct: 12141 EKKVPRV 12147
>gi|182434607|ref|YP_001822326.1| putative NRPS-type-I PKS fusion protein [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178463123|dbj|BAG17643.1| putative NRPS-type-I PKS fusion protein [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 3156
Score = 43.5 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 14/226 (6%)
Query: 6 NHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIRE 65
+ P+ + + R + + + I + + G + I
Sbjct: 322 STPVGDPIEANALARALAVGRAPGARAY---VGSVKTNIGHTESAAGIAGLIKTVLSIEH 378
Query: 66 IAPIP----LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN-DISGKTVVNKPT 120
P + I+ P + ++ + VV +
Sbjct: 379 RTIPPHINLENLNPAIDPAALPYEIPTRPTPWPEHEGPARAGVNSFGFGGTNAHVVLEEA 438
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGL 180
D+ P G L + E+ A ++ + A+G A+ + L
Sbjct: 439 PGPLPDTRPVTSGA-SAGRRWSILPLSARNPDALKEMAAGIRSELAGANGP--AVTLDDL 495
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
G + ++ LP +++A+ S + + A+ ++
Sbjct: 496 GHTLAHRRQ---HLPERLSVAYTSRASLDEALAAHARGDAHPRVVH 538
>gi|313111010|ref|ZP_07796848.1| putative phospholipase [Pseudomonas aeruginosa 39016]
gi|310883350|gb|EFQ41944.1| putative phospholipase [Pseudomonas aeruginosa 39016]
Length = 401
Score = 43.5 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 26/218 (11%)
Query: 176 VV--SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
++ +G A + + G + A+ + +
Sbjct: 41 IIFEDEVGRQLQEALSAAAERGVEVQVTVDGYGTASLSTDYLARLTAAGVRVHL------ 94
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG------AMLLSNKESAE- 286
+ L + + + L+R + R + G +NY + +
Sbjct: 95 ---FDPRPRLLGMRTNLFRRLHRKLVVIDRRQAFVGGINYGEDHLVRRGNMAKQDYAVRV 151
Query: 287 --VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ + L + + L A P V + D+ D I +
Sbjct: 152 EGPVVRDIRQACLALLEPDADYPPLRPSGA---GQPARVRLVIRDNDQSSDDIEREYLQA 208
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
AR + +A A+ + + L+ R V V
Sbjct: 209 IRQARRR---LLIANAYFFPGYRLLRELRDAARRGVRV 243
>gi|168205308|ref|ZP_02631313.1| putative conserved hypothetical protein [Clostridium perfringens E
str. JGS1987]
gi|170663078|gb|EDT15761.1| putative conserved hypothetical protein [Clostridium perfringens E
str. JGS1987]
Length = 499
Score = 43.5 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 39/123 (31%), Gaps = 3/123 (2%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
T E SV A P T + ++ PS D T + + + +
Sbjct: 212 KTNKEDKKSSVSNVAATKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPST 271
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG---REDTEVPAMDKNFCSNA 168
G TV + ++ D++ EE+ G + + K G + E P+
Sbjct: 272 GDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPE 331
Query: 169 SGA 171
Sbjct: 332 EKP 334
Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 37/126 (29%), Gaps = 7/126 (5%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI----QN 108
T+++ + P P + P ++ + + + +
Sbjct: 235 TVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEK 294
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG---REDTEVPAMDKNFC 165
+G TV + ++ D++ EE+ G + + K G + E P+
Sbjct: 295 PSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTTT 354
Query: 166 SNASGA 171
Sbjct: 355 KPEEKP 360
Score = 40.4 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 5/119 (4%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI----QN 108
T+++ + P P + P ++ + + + +
Sbjct: 261 TVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEK 320
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-EVPAMDKNFCS 166
+G TV + ++ D++ EE+ G + + K G T DK
Sbjct: 321 PSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTTTKPEEKPSTGDTTTKPEEKPDKPVVP 379
Score = 40.0 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 8/128 (6%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI----QN 108
T+++ + P P + P ++ + + + +
Sbjct: 274 TVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEKPSTGDTVTKPEEK 333
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILG---LSKKELLAKNKVGREDTE-VPAMDKNF 164
+G TV + ++ D+ EE+ G +E K V E TE AM +
Sbjct: 334 PSTGDTVTKPEEKPSTGDTTTKPEEKPSTGDTTTKPEEKPDKPVVPVETTEYQQAMTQQL 393
Query: 165 CSNASGAR 172
S+ + R
Sbjct: 394 WSDFNAYR 401
>gi|284172919|ref|YP_003406300.1| pyridoxal-5'-phosphate-dependent protein subunit beta
[Haloterrigena turkmenica DSM 5511]
gi|284017679|gb|ADB63627.1| Pyridoxal-5'-phosphate-dependent protein beta subunit
[Haloterrigena turkmenica DSM 5511]
Length = 359
Score = 43.5 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 15/109 (13%)
Query: 289 FKEFAKRGLLFFDD-----GSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKG 343
FK ++ G + D G+ + + +P D+ D R+ R++ +
Sbjct: 234 FKALSEAG--WIDSVPRLLGAQAAGYAPIASELHTVPTSENDVA-DGVHIREPTRKQ-QL 289
Query: 344 LEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392
L+ IA T G AI + + + + L + H V P S +A +
Sbjct: 290 LDAIAATNGDAIAI------TEDTVEAELDRLHANGFYVEPTSAIAPAA 332
>gi|152989114|ref|YP_001348511.1| cardiolipin synthase 2 [Pseudomonas aeruginosa PA7]
gi|150964272|gb|ABR86297.1| probable phospholipase [Pseudomonas aeruginosa PA7]
Length = 401
Score = 43.1 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 63/218 (28%), Gaps = 26/218 (11%)
Query: 176 VV--SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
++ +G+ A + + G + A+ + +
Sbjct: 41 IIFEDEVGLQLQEALSAAAERGVEVQVTVDGYGTASLSPDYLARLTASGVRVHL------ 94
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG------AMLLSNKESAE- 286
+ L + + + L+R + R + G +NY + +
Sbjct: 95 ---FDPRPRLLGMRTNLFRRLHRKLVVIDRQQAFVGGINYGEDHLVRRGNMAKQDYAVRV 151
Query: 287 --VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ + L + + L A + P V + D+ D I +
Sbjct: 152 EGPVVRDIRQACLALLEPDADYPPLRPSGAEQ---PARVRLVIRDNDQSSDDIEREYLQA 208
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
AR + +A A+ + + L+ R V V
Sbjct: 209 IRQARRR---LLIANAYFFPGYRLLRELRDAARRGVRV 243
>gi|51596978|ref|YP_071169.1| hypothetical protein YPTB2659 [Yersinia pseudotuberculosis IP
32953]
gi|51590260|emb|CAH21897.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
Length = 970
Score = 43.1 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 11/117 (9%), Positives = 22/117 (18%), Gaps = 3/117 (2%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
E AP T P + T + + + +T
Sbjct: 757 PETTAPP--ETTAPPETTAPPETTAPPETTAPPETTAPPET-TAPPETTAPPETTAPPET 813
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
T + + P + E A + + +
Sbjct: 814 TAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAP 870
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 10/105 (9%), Positives = 21/105 (20%), Gaps = 1/105 (0%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
AP T P + T + + + +T T +
Sbjct: 749 APPETTAPPETTAPPETTAPPETTAPPET-TAPPETTAPPETTAPPETTAPPETTAPPET 807
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ P + E A + + +
Sbjct: 808 TAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAP 852
Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 24/108 (22%), Gaps = 1/108 (0%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
+ A T + + AP T P + T + +
Sbjct: 759 TTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPET-TAPPETTAPP 817
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED 154
+ +T T + + P + E A +
Sbjct: 818 ETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPP 865
>gi|326923645|ref|XP_003208045.1| PREDICTED: protein transport protein Sec24C-like isoform 1
[Meleagris gallopavo]
Length = 1122
Score = 43.1 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 33/150 (22%), Gaps = 3/150 (2%)
Query: 10 RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPI 69
++ P + S + S + G Y G + IP S P
Sbjct: 52 QQPVPPQGSVRALPTSGAPPPASGTSLPSGHQGYSQFGQ---GDVQNGIPTSTAPMQRPP 108
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
L S+ + Q + G T ++ P + P
Sbjct: 109 ASQPFLPGSAPAPVSQPSTFQQYGPPPSSVQQLSNHMAGMTIGSTSISAPPPAGLGYGPP 168
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPA 159
T + S P
Sbjct: 169 TSVPPVSGSFSATGSGLYAPYTASQGPPPP 198
Score = 36.6 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 26/114 (22%), Gaps = 9/114 (7%)
Query: 59 PYSVIREIAP-IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P S +++++ + + P + S + T
Sbjct: 134 PPSSVQQLSNHMAGMTIGSTSISAPPPAGLGYGPPTSVPPVSGSFSATGSGLYAPYTASQ 193
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
P + LP + R TEVP S G
Sbjct: 194 GPPPPSVPQGLPLAQ--------PPFSGQPVPTQRLPTEVPGFAPPPSSTGIGP 239
>gi|312374983|gb|EFR22439.1| hypothetical protein AND_15267 [Anopheles darlingi]
Length = 694
Score = 43.1 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 27/143 (18%), Gaps = 8/143 (5%)
Query: 41 SIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS 100
S A V P P K + + S
Sbjct: 35 SALTNDPVAPVERKRPGRKPLAATARKPSPGRKASPARKASPARKASPARKASPARRASP 94
Query: 101 QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
+ +G + + +S + + R
Sbjct: 95 GRKPKATITATG----VATAPPAVVRKPTVLATEPSAKVSPESKEEPRRSSRIRASEDKS 150
Query: 161 DKNFCSNASGA----RIAIVVSG 179
DK R+++++
Sbjct: 151 DKALLGIKGSPPIDKRLSVIIDD 173
>gi|332224036|ref|XP_003261173.1| PREDICTED: G-protein coupled receptor 64 isoform 8 [Nomascus
leucogenys]
Length = 966
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 238 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 297
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 298 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 357
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 358 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 417
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 418 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 472
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 473 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 519
>gi|332224034|ref|XP_003261172.1| PREDICTED: G-protein coupled receptor 64 isoform 7 [Nomascus
leucogenys]
Length = 979
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 200 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 259
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 260 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 319
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 320 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 379
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 380 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 434
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 435 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 481
>gi|332224032|ref|XP_003261171.1| PREDICTED: G-protein coupled receptor 64 isoform 6 [Nomascus
leucogenys]
Length = 987
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 208 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 267
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 268 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 327
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 328 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 387
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 388 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 442
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 443 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 489
>gi|332224030|ref|XP_003261170.1| PREDICTED: G-protein coupled receptor 64 isoform 5 [Nomascus
leucogenys]
Length = 995
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 216 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 275
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 276 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 335
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 336 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 395
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 396 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 450
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 451 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 497
>gi|332224028|ref|XP_003261169.1| PREDICTED: G-protein coupled receptor 64 isoform 4 [Nomascus
leucogenys]
Length = 993
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 214 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 273
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 274 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 333
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 334 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 393
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 394 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 448
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 449 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 495
>gi|332224026|ref|XP_003261168.1| PREDICTED: G-protein coupled receptor 64 isoform 3 [Nomascus
leucogenys]
Length = 1001
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 222 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 281
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 282 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 341
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 342 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 401
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 402 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 456
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 457 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 503
>gi|332224024|ref|XP_003261167.1| PREDICTED: G-protein coupled receptor 64 isoform 2 [Nomascus
leucogenys]
Length = 1003
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 224 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 283
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 284 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 343
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 344 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 403
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 404 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 458
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 459 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 505
>gi|332224022|ref|XP_003261166.1| PREDICTED: G-protein coupled receptor 64 isoform 1 [Nomascus
leucogenys]
Length = 1014
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 235 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPNATSFAEPPDYSPMTHNVPSLIG 294
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-----GQIQ 107
I + P + + +P E SP + + + S +
Sbjct: 295 EIHPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVI 354
Query: 108 NDISGKT---VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 355 TTSAPPVQTDIVNTSSISDLENQVSQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 414
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 415 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 469
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 470 ---LQVSLETQA-PENSIGTITLPSSLMNNLPANDMELASRVQFNFFETPA 516
>gi|291393168|ref|XP_002712986.1| PREDICTED: Importin-5-like [Oryctolagus cuniculus]
Length = 1256
Score = 42.7 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 39/174 (22%), Gaps = 21/174 (12%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQH--DGQIQNDISG 112
S A PL +P + P + + +++ +
Sbjct: 57 SRPHAPMAAAWPASRPLPLPQRRGSRPQPRSEAGGRHPHPQPSPAARRARPVTALQVTTA 116
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--GREDTEVPA------MDKNF 164
+ V+ R E G ++ VPA + F
Sbjct: 117 RRVIETARRRAHSSPGGPREGAAADGPPVPPATVRSPPTPAVPPCRVPASEMGAPPGRPF 176
Query: 165 CSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
A R T +P + F +EA++
Sbjct: 177 SLRALAPR-----------SESTAETYENIPGQSKITFLLQAIRNTAAAEEARQ 219
>gi|326667820|ref|XP_003198677.1| PREDICTED: microtubule-associated protein 1A [Danio rerio]
gi|189339115|dbj|BAG48173.1| hypothetical microtubule-associated protein 1b [Danio rerio]
Length = 2033
Score = 42.7 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 9/138 (6%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
+ E P ++ P + +PS+ D++ + S D I
Sbjct: 1733 EEKPLAKSGEGPPPPEEKQQTKQCEETPPTSVSESAPSQTDSDVPPGTEECPSITADANI 1792
Query: 107 ------QNDISGKTVVNKPTRSTSI---DSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+ + +T+ + + D PT + + L A+ G+ +
Sbjct: 1793 DSEDDSETLPTDRTITYRHADPPPVTPRDPAPTPPHPDACMVDPEVLKAEEASGKPKKNI 1852
Query: 158 PAMDKNFCSNASGARIAI 175
+ K + + AI
Sbjct: 1853 SSKTKPSATKSLSKTSAI 1870
>gi|157136400|ref|XP_001663738.1| uncoordinated protein [Aedes aegypti]
gi|108869947|gb|EAT34172.1| uncoordinated protein [Aedes aegypti]
Length = 4560
Score = 42.7 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 35/121 (28%), Gaps = 2/121 (1%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
V+ + AP P P + + P+++ ++ + + +
Sbjct: 802 PKKAEKVPEQPKVVEKKAPEPPKTPTKVSESPKPAEKKAAESPKVIE--TPVKPVEKKTL 859
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
S K + +S T + S + + + K+ ++ + +
Sbjct: 860 ESPKVPTKAIESPKAFESPKTPTKVPESSKSPNKPVDQPKIPESSKQLEKKVEPKAPQSP 919
Query: 170 G 170
Sbjct: 920 K 920
>gi|297288985|ref|XP_002808407.1| PREDICTED: LOW QUALITY PROTEIN: protein piccolo-like [Macaca
mulatta]
Length = 5098
Score = 42.7 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 30/119 (25%), Gaps = 6/119 (5%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P P P + + P+K L +Q G ++ +
Sbjct: 303 KPPIQQPTPGKPPAQQPGPEKSQPGPAKPP--AQPPGLTKPLAQQPGTVKPPVQPPGTAK 360
Query: 118 KPTRSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P E+ L K L VG+ + P K +
Sbjct: 361 PPAQPLGPAKSPAQQTGSEKPSLEQPGPKTLAQPPGVGKTPAQQPGPAKPPIQQVGTPK 419
Score = 40.4 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 31/123 (25%), Gaps = 2/123 (1%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIED-KQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
VG P I + PL + QSP+K T + + Q
Sbjct: 397 VGKTPAQQPGPAKPPIQQVGTPKPLAQQSGLQSPAKAPGPTKTPAQQAGPGKIPAQQAGP 456
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
PTR S P +K + + + P K
Sbjct: 457 AKPSAQQTGPTRLPSQLPGPAKSPSQQPSSAKPPP-QQPGSAKPPPQQPGSAKPPSQQPG 515
Query: 170 GAR 172
A+
Sbjct: 516 SAK 518
>gi|17231860|ref|NP_488408.1| serine/threonine kinase [Nostoc sp. PCC 7120]
gi|17133504|dbj|BAB76067.1| serine/threonine kinase [Nostoc sp. PCC 7120]
Length = 597
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 7/141 (4%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
K +++ + L + GL + +S S+ V+ P P+
Sbjct: 300 KPQGEPLRWAEPNRQKSLLIFGGLIAGGLMAGVAMSTLTRQPQSQ---TPVVSNPIPSPV 356
Query: 72 TIPLNIEDKQSPSKRDN----NTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
+ P D+ +T + Q + + +N P +
Sbjct: 357 SQIPTTAPNTPPVSPDSILPDSTEQPVAPDTPPQPETRQENPNPPAVFTPAPDNTPITAD 416
Query: 128 LPTIEERLILGLSKKELLAKN 148
P + I + + A
Sbjct: 417 TPAPQPTSIPEPENQPVPAPP 437
>gi|218891893|ref|YP_002440760.1| cardiolipin synthase 2 [Pseudomonas aeruginosa LESB58]
gi|218772119|emb|CAW27898.1| probable phospholipase [Pseudomonas aeruginosa LESB58]
Length = 401
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 26/218 (11%)
Query: 176 VV--SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
++ +G A + + G + A+ + +
Sbjct: 41 IIFEDEVGRQLQEALSAAAERGVEVQVTVDGYGTASLSPDYLARLTASGVRVHL------ 94
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG------AMLLSNKESAE- 286
+ L + + + L+R + R + G +NY + +
Sbjct: 95 ---FDPRPRLLGMRTNLFRRLHRKLVVIDRRQAFVGGINYGEDHLVRRGNMAKQDYAVRV 151
Query: 287 --VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ + L + + L A P V + D+ D I +
Sbjct: 152 EGPVVRDIRQACLALLEPDADYPPLRPSGA---GQPARVRLVIRDNDQSSDDIEREYLQA 208
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
AR + +A A+ + + L+ R V V
Sbjct: 209 IRQARRR---LLIANAYFFPGYRLLRELRDAARRGVRV 243
>gi|291407170|ref|XP_002719986.1| PREDICTED: G protein-coupled receptor 64 isoform 8 [Oryctolagus
cuniculus]
Length = 993
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + + I N S
Sbjct: 301 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKT-----NIINITS 349
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
+ N+ ++ +E+ L LG + + + N+V + PA+
Sbjct: 350 VSDLENQVSQ---------MEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 397
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 398 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 452
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 453 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 495
>gi|291407168|ref|XP_002719985.1| PREDICTED: G protein-coupled receptor 64 isoform 7 [Oryctolagus
cuniculus]
Length = 1001
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + + I N S
Sbjct: 309 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKT-----NIINITS 357
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
+ N+ ++ +E+ L LG + + + N+V + PA+
Sbjct: 358 VSDLENQVSQ---------MEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 405
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 406 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 460
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 461 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 503
>gi|291407166|ref|XP_002719984.1| PREDICTED: G protein-coupled receptor 64 isoform 6 [Oryctolagus
cuniculus]
Length = 994
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + + I N S
Sbjct: 302 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKT-----NIINITS 350
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
+ N+ ++ +E+ L LG + + + N+V + PA+
Sbjct: 351 VSDLENQVSQ---------MEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 398
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 399 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 453
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 454 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 496
>gi|291407164|ref|XP_002719983.1| PREDICTED: G protein-coupled receptor 64 isoform 5 [Oryctolagus
cuniculus]
Length = 1007
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + + I N S
Sbjct: 315 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKT-----NIINITS 363
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
+ N+ ++ +E+ L LG + + + N+V + PA+
Sbjct: 364 VSDLENQVSQ---------MEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 411
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 412 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 466
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 467 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 509
>gi|291407158|ref|XP_002719980.1| PREDICTED: G protein-coupled receptor 64 isoform 2 [Oryctolagus
cuniculus]
Length = 1015
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT+S +P + + P SP+K + L + + I N S
Sbjct: 323 GTLSPPVPQTNLSHTP------PPVKSSFASPTKAAPANATSALPDKT-----NIINITS 371
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDKNFCSNAS 169
+ N+ ++ +E+ L LG + + + N+V + PA+
Sbjct: 372 VSDLENQVSQ---------MEKALSLGSLETDYAGEMINQVSKLLRSPPALLAPLAQ--- 419
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQEAILQIP 228
R+ VV +G+ + + I+L ++ LA N ++ D A+ LQ+
Sbjct: 420 --RLLKVVDDIGLQLNFSNKTISLTSPSLALAVVRVNASNFDTTTFAAQDPAN---LQVS 474
Query: 229 MQAFDESYNEDDSYTLKVTQ------TVQQLLNRLRYSLRRGTG 266
++ N TL + QL +R++++
Sbjct: 475 LETQA-PENSIGIITLPSSLMSTIPANDMQLASRIQFNFFETPA 517
>gi|116748938|ref|YP_845625.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116698002|gb|ABK17190.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 629
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 30/132 (22%), Gaps = 10/132 (7%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC-NQLKNDSSQHDGQIQND 109
+G + + + +E P+ P + P+ N + +
Sbjct: 423 MGKETSAVEPTTGKETNPVKPEDPAKAKSSPEPAPAPREQAPPNPVTMGKETSAVEPTTG 482
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRE---------DTEVPAM 160
V + P R + + TE PA
Sbjct: 483 KETNPVKTEDPAKAKSSPEPAPAPREQPPPNPVTTGKETSAVEPTTGKETNPVKTEDPAK 542
Query: 161 DKNFCSNASGAR 172
K+ A R
Sbjct: 543 AKSSPEPAPAPR 554
>gi|119961377|ref|YP_948381.1| lysozyme like protein [Arthrobacter aurescens TC1]
gi|119948236|gb|ABM07147.1| putative lysozyme like protein [Arthrobacter aurescens TC1]
Length = 915
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 10/171 (5%)
Query: 9 LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAP 68
++ KT ++R+GL L + + + P S RE P
Sbjct: 1 MKMKTTSMDPVRRIPLARVGLALTIALIGSSSLGAPAWAQT---SGPQPAPQSETREPTP 57
Query: 69 IPLTIPLNIEDKQSPSKRDNNT---VCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
P +PS D T V Q + + ++ + T +P +
Sbjct: 58 SQGPRPAGDGSGSAPSGSDLPTIEPVPGQQEPPPAVEPSPLEAPLPTSTASGQPEAQRAT 117
Query: 126 DSLPTIE----ERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ + + ++G+ V A + S SGA+
Sbjct: 118 PQAMPGSANNADAMKAAMRAAIPAGGAEMGQRSPRVLAKQQKAASQPSGAK 168
>gi|15597351|ref|NP_250845.1| cardiolipin synthase 2 [Pseudomonas aeruginosa PAO1]
gi|254240583|ref|ZP_04933905.1| hypothetical protein PA2G_01241 [Pseudomonas aeruginosa 2192]
gi|9948173|gb|AAG05543.1|AE004642_10 probable phospholipase [Pseudomonas aeruginosa PAO1]
gi|126193961|gb|EAZ58024.1| hypothetical protein PA2G_01241 [Pseudomonas aeruginosa 2192]
Length = 401
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 26/218 (11%)
Query: 176 VV--SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
++ +G A + + G + A+ + +
Sbjct: 41 IIFEDEVGRQLQEALSAAAERGVEVQVTVDGYGTASLSPDYLARLTASGVRVHL------ 94
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG------AMLLSNKESAE- 286
+ L + + + L+R + R + G +NY + +
Sbjct: 95 ---FDPRPRLLGMRTNLFRRLHRKLVVIDRRQAFVGGINYGEDHLVRRGNMAKQDYAVRV 151
Query: 287 --VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ + L + + L A P V + D+ D I +
Sbjct: 152 EGPVVRDIRQACLALLEPDADYPPLRPSGA---GQPARVRLVIRDNDQSSDDIEREYLQA 208
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
AR + +A A+ + + L+ R V V
Sbjct: 209 IRQARRR---LLIANAYFFPGYRLLRELRDAARRGVRV 243
>gi|206895914|ref|YP_002247199.1| 6-phosphofructokinase (Phosphofructokinase)(Phosphohexokinase)
[Coprothermobacter proteolyticus DSM 5265]
gi|206738531|gb|ACI17609.1| 6-phosphofructokinase (Phosphofructokinase)(Phosphohexokinase)
[Coprothermobacter proteolyticus DSM 5265]
Length = 316
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 61/173 (35%), Gaps = 34/173 (19%)
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFK----EFAK 294
+ +L+ +++ G ++ + + + + + + + ++
Sbjct: 101 GGNGSLRGAMALEEAGIPTVGIPGTIDNDLGGTDFTLGFITAAETAVKAVRRLTDVALSE 160
Query: 295 RGLLFFD-----DGSSPRNLTRVL-APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
RG+ F + G + A +N+P A ++I K+ E
Sbjct: 161 RGIFFVEVMGRNSGYIAMFVGLATGADFVNIPEAPA--------TSEEIYTKISQAE--- 209
Query: 349 RTTGQAIGV-----AVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
G AI + +++WL++E RD+ + + L + +P++
Sbjct: 210 ---GSAIVIWAEGCGDPSP-----LAEWLREELNRDIEISRIGHLQRGGTPAT 254
>gi|308071415|ref|YP_003873020.1| acyltransferase [Paenibacillus polymyxa E681]
gi|305860694|gb|ADM72482.1| Predicted acyltransferase [Paenibacillus polymyxa E681]
Length = 652
Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 57/203 (28%), Gaps = 21/203 (10%)
Query: 11 KKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIP 70
+ +R++ + + + L + + +Y+ A V S + P
Sbjct: 370 RSAVRRQARWRWMPTTTAAVLFAGILVGTVHLYVASPDATVQAASSDEKPVAKAKAMPPL 429
Query: 71 LTIPLNIEDKQSP---SKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
+ + + V + + + + V S +
Sbjct: 430 HGTVSVASKEAKAIKLQGAEGSKVQTPVPSQAQMSKNTAVQAGTTDNVTKPSEPSDKLKE 489
Query: 128 LPTI----------------EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
I + + + S + ++GR+ E PA+ + N
Sbjct: 490 ATPITGDGSSVTAIGDSVMLDVQSYIQDSFPGAVVDGRIGRQMAEAPAVLEQLRQNGQLG 549
Query: 172 RIAIVVSGLGISQTGTQRAINLL 194
+ I+ LG + T+ + L
Sbjct: 550 KTVII--ELGTNGAFTKDQLANL 570
>gi|332278245|sp|Q9Y6V0|PCLO_HUMAN RecName: Full=Protein piccolo; AltName: Full=Aczonin
Length = 5065
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|119597392|gb|EAW76986.1| hCG19253, isoform CRA_b [Homo sapiens]
Length = 5314
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|119597391|gb|EAW76985.1| hCG19253, isoform CRA_a [Homo sapiens]
Length = 5305
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|182414490|ref|YP_001819556.1| branched-chain amino acid aminotransferase [Opitutus terrae PB90-1]
gi|177841704|gb|ACB75956.1| branched-chain amino acid aminotransferase [Opitutus terrae PB90-1]
Length = 288
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 22/136 (16%)
Query: 269 GVMNYRGAMLLSNKESAEVIF-------KEFAKRGLLFFDDG---SSPRNLTR------- 311
+ N G + + E I E + G + +
Sbjct: 153 YLNNILGKIEARQFGALEAIMLNDQGYIAECTADNIFIVHQGEIITPAASQGALRGITRG 212
Query: 312 ---VLAPKLNLPYMVADLYLDDQ--VDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
+A +L +P ADL D D + + + + G+ IG + +
Sbjct: 213 AIFDVAKELGVPLREADLTRYDVWCADECFLTGTGAEVVPVVKLDGREIGTGHPGPITQQ 272
Query: 367 VISQWLQQEHVRDVSV 382
V++ + ++ V +
Sbjct: 273 VLASFRRRVLVEGARI 288
>gi|260796019|ref|XP_002593002.1| hypothetical protein BRAFLDRAFT_117784 [Branchiostoma floridae]
gi|229278226|gb|EEN49013.1| hypothetical protein BRAFLDRAFT_117784 [Branchiostoma floridae]
Length = 1602
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 37/143 (25%), Gaps = 7/143 (4%)
Query: 31 LLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAP-IPLTIPLNIED--KQSPSKRD 87
FC V LS A + P + + + AP P P K +P+
Sbjct: 25 AGFCGRGVDLSE-AAYKPAPTAPTGKPAPTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPT 83
Query: 88 NNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID-SLPTIEERLILGLSKKELLA 146
+ + + + +KP + D PT + +
Sbjct: 84 DKPAPTAPTDKP--APTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPE 141
Query: 147 KNKVGREDTEVPAMDKNFCSNAS 169
+ DK + +
Sbjct: 142 PTAPADKPAPTAPTDKPAPTAPT 164
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 32/126 (25%), Gaps = 8/126 (6%)
Query: 49 AFVGTISEMIPYSVIREIAP-IPLTIPLNIED--KQSPSKRDNNTVCNQLKNDSSQHDGQ 105
A + + P + + AP P P K +P+ + +
Sbjct: 51 APTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPAPTAPVDKP--APTA 108
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ + +KP + D + A T+ PA
Sbjct: 109 PTDKPAPTAPTDKPAPTAPTDKPAPTAPT---DKPEPTAPADKPAPTAPTDKPAPTAPTD 165
Query: 166 SNASGA 171
+ A A
Sbjct: 166 TPAPTA 171
Score = 40.8 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 35/135 (25%), Gaps = 14/135 (10%)
Query: 49 AFVGTISEMIPYSVIREIAP-IPLTIPLNIED--KQSPSKR-------DNNTVCNQLKND 98
A + + P + + AP P P K +P+
Sbjct: 96 APTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPEPTAPADKPAPTAPT 155
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSID----SLPTIEERLILGLSKKELLAKNKVGRED 154
+ + + P + +D + PT + + K+ A +
Sbjct: 156 DKPAPTAPTDTPAPTAPASTPLPAAPVDKPAPTAPTDKPAPTAPSAPKDSPAPEPTPTKP 215
Query: 155 TEVPAMDKNFCSNAS 169
T P K A+
Sbjct: 216 TAEPVTTKPKTEPAT 230
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 27/136 (19%), Gaps = 13/136 (9%)
Query: 49 AFVGTISEMIPYSVIREIAP-IPLTIPLNIED--KQSPSKR-------DNNTVCNQLKND 98
A + P + + AP P P K +P+
Sbjct: 69 APTAPTDKPAPTAPTDKPAPTAPTDKPAPTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPT 128
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
+ +KP + D P D P
Sbjct: 129 DKPAPTAPTDKPEPTAPADKPAPTAPTDK-PAPTAPTDTPAPTAPASTPLPAAPVDKPAP 187
Query: 159 --AMDKNFCSNASGAR 172
DK + S +
Sbjct: 188 TAPTDKPAPTAPSAPK 203
Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 32/127 (25%), Gaps = 7/127 (5%)
Query: 49 AFVGTISEMIPYSVIREIAP-IPLTIPLNIED--KQSPSKRDNNTVCNQLKNDSSQHDGQ 105
A + P + + + AP P P K +P+ + +
Sbjct: 87 APTAPTDKPAPTAPVDKPAPTAPTDKPAPTAPTDKPAPTAPTDKPAPTAPTDKP--EPTA 144
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP-AMDKNF 164
+ + +KP + D+ P L + D P A
Sbjct: 145 PADKPAPTAPTDKPAPTAPTDT-PAPTAPASTPLPAAPVDKPAPTAPTDKPAPTAPSAPK 203
Query: 165 CSNASGA 171
S A
Sbjct: 204 DSPAPEP 210
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 38/173 (21%), Gaps = 26/173 (15%)
Query: 2 SIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYS 61
+DL+ K P + + + A + P +
Sbjct: 31 GVDLSEAAYKPAPTAPTGKPAPTAP------------------VDKPAPTAPTDKPAPTA 72
Query: 62 VIREIAP-IPLTIPLNIED--KQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
+ AP P P K +P+ + + + + +K
Sbjct: 73 PTDKPAPTAPTDKPAPTAPTDKPAPTAPVDKPAPTAPTDKP--APTAPTDKPAPTAPTDK 130
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
P + D E T+ PA + A
Sbjct: 131 PAPTAPTDKP---EPTAPADKPAPTAPTDKPAPTAPTDTPAPTAPASTPLPAA 180
>gi|306921613|dbj|BAJ17886.1| piccolo [synthetic construct]
Length = 5143
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|150378539|ref|NP_149015.2| protein piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|167522703|ref|XP_001745689.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776038|gb|EDQ89660.1| predicted protein [Monosiga brevicollis MX1]
Length = 2262
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 40/153 (26%), Gaps = 21/153 (13%)
Query: 57 MIPYSVIREIAPIPLTIP------LNIEDKQSPSKRD--NNTVCNQLKNDSSQHDGQIQN 108
P + P P P K +P + +
Sbjct: 1508 PEPPQSPKHAPPEPPQSPKHAPPEPPQSPKHAPPGPPQSPKHAPPEPPQSPKHAPPKP-- 1565
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
++ + P + LP E + L + R + A + +A
Sbjct: 1566 ---PQSPKHAPPKPPQSPVLPPSEAASDAASELSDSLPELNESRPRSGAMATSRPAAQSA 1622
Query: 169 SGARIAIVVSGLGISQTGTQRAINLLPANITLA 201
+ ++ + + +R N P ITL+
Sbjct: 1623 NPEKVEL--------LSALERVANEHPKGITLS 1647
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 20/107 (18%), Gaps = 4/107 (3%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
+P K +P K + Q + P S
Sbjct: 1469 SPKYAPPEPPQSPKHAPPKPP--QSPKHAPPEPPQSPKHAPPEPPQSPKHAPPEPPQSPK 1526
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVP--AMDKNFCSNASGA 171
P + + E + P A K S
Sbjct: 1527 HAPPEPPQSPKHAPPGPPQSPKHAPPEPPQSPKHAPPKPPQSPKHAP 1573
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 29/124 (23%), Gaps = 8/124 (6%)
Query: 57 MIPYSVIREIAPIPLTIP------LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
P + P P P K +P + + Q +
Sbjct: 1475 PEPPQSPKHAPPKPPQSPKHAPPEPPQSPKHAP--PEPPQSPKHAPPEPPQSPKHAPPEP 1532
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
P S P + K + + + P + + ++ +
Sbjct: 1533 PQSPKHAPPGPPQSPKHAPPEPPQSPKHAPPKPPQSPKHAPPKPPQSPVLPPSEAASDAA 1592
Query: 171 ARIA 174
+ ++
Sbjct: 1593 SELS 1596
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 28/118 (23%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK 113
+ E + +V+ P K +P + + K S + S K
Sbjct: 1445 VPEPVGPAVVPVRPPQHAPPGPPQSPKYAPPEPPQSPKHAPPKPPQSPKHAPPEPPQSPK 1504
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+P +S + + G + A + S
Sbjct: 1505 HAPPEPPQSPKHAPPEPPQSPKHAPPEPPQSPKHAPPGPPQSPKHAPPEPPQSPKHAP 1562
>gi|71029838|ref|XP_764562.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351516|gb|EAN32279.1| hypothetical telomeric SfiI fragment 20 protein 3 [Theileria parva]
Length = 3300
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 25/119 (21%), Gaps = 11/119 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ E P + P +P+K + V D S ++
Sbjct: 609 PLTAPPEAKPIIPTTPEVSGEVVTPAKAATVTTPAKAPSPKVPTPPTADESATPSTTPDE 668
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+ V P + + V + P+ A
Sbjct: 669 SATPVVTT-----------PAKAPDAKVTTPPTPDESATPVVTTPAKAPSPKVPTPPTA 716
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
S AP P T P ++ +P + + S + T
Sbjct: 2592 SASTGSAPAPATTPAKAQEATTPPQPKAVPATAATTSSSPAKVTTTPPETKAPTATTPAP 2651
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+ + + P + K + T P+ + A+ +++
Sbjct: 2652 QVSGTEVTP--SKAAPATTQPKAVPVTTPATPSATTQPSSTEAKAPTATTPQVS 2703
>gi|260791478|ref|XP_002590756.1| hypothetical protein BRAFLDRAFT_78171 [Branchiostoma floridae]
gi|229275952|gb|EEN46767.1| hypothetical protein BRAFLDRAFT_78171 [Branchiostoma floridae]
Length = 395
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 6/164 (3%)
Query: 9 LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAP 68
+ + P+R + ++ G C+ + L + T S +P +V+R
Sbjct: 146 VGQTGPRRFQNRAYLVRLEGKLRTRCSGLRALHNQVSSRPEPSRTPSGAVPNTVLRPSRT 205
Query: 69 IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSL 128
+ + PS+ V N ++ TV ++P
Sbjct: 206 PSVRSCPK--HRPEPSRTPPGAVPNTARSRPEHRPS----GAVPNTVRSRPEHRPEPSRT 259
Query: 129 PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P+ + + R VP ++ SGAR
Sbjct: 260 PSGAVPNTVRSPSRTPSGARPEHRPSGAVPNTVRSPSRKPSGAR 303
>gi|107101579|ref|ZP_01365497.1| hypothetical protein PaerPA_01002623 [Pseudomonas aeruginosa PACS2]
gi|254235181|ref|ZP_04928504.1| hypothetical protein PACG_01070 [Pseudomonas aeruginosa C3719]
gi|126167112|gb|EAZ52623.1| hypothetical protein PACG_01070 [Pseudomonas aeruginosa C3719]
Length = 401
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 26/218 (11%)
Query: 176 VV--SGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFD 233
++ +G A + + G + A+ + +
Sbjct: 41 IIFEDEVGRQLQEALSAAAERGVEVQVTVDGYGTASLSPDYLARLTASGVRVHL------ 94
Query: 234 ESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG------AMLLSNKESAE- 286
+ L + + + L+R + R + G +NY + +
Sbjct: 95 ---FDPRPRLLGMRTNLFRRLHRKLVVIDRRQAFVGGINYGEDHLVRRGNMAKQDYAVRV 151
Query: 287 --VIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL 344
+ ++ + L + + L A P V + D+ D I +
Sbjct: 152 EGPVVRDIRQACLALLEPDADYPPLRPSGA---GQPARVRLVIRDNDQSSDDIEHEYLQA 208
Query: 345 EEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSV 382
AR + +A A+ + + L+ R V V
Sbjct: 209 IRQARRR---LLIANAYFFPGYRLLRELRDAARRGVRV 243
>gi|308462072|ref|XP_003093322.1| hypothetical protein CRE_03451 [Caenorhabditis remanei]
gi|308250333|gb|EFO94285.1| hypothetical protein CRE_03451 [Caenorhabditis remanei]
Length = 1094
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 47/174 (27%), Gaps = 10/174 (5%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P + P Q I R + ++ + P +
Sbjct: 62 MPPKAPQPVLAPQAPQPILRRRHPRPISSAARHPRRFLAPQALPDDSSVARHPRRFLASQ 121
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG----KTVVNKPTRS 122
AP ++ P + +P +++ +DSS + +G + P S
Sbjct: 122 APQTISTPQAPQTILAPQCTPDDSSAAGTPDDSSVAGTPADSSAAGTPDDSSATGTPDDS 181
Query: 123 TSIDSLP------TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
++ + T ++ G S +A PA + A
Sbjct: 182 SATGTPADSSVAGTPDDSSATGTSDDSSVAGTPDDSSAAGTPADSSAAGTPADS 235
>gi|256376703|ref|YP_003100363.1| hypothetical protein Amir_2580 [Actinosynnema mirum DSM 43827]
gi|255921006|gb|ACU36517.1| hypothetical protein Amir_2580 [Actinosynnema mirum DSM 43827]
Length = 1291
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 23/126 (18%), Gaps = 9/126 (7%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
++ A P P + R + D
Sbjct: 336 TNTPAADTPGATAPRTDTSTADAPGASPRGTTPEPGAPSRATQPDGGPTPSSRPAADTT- 394
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
S V+ PT S D + G G + PA
Sbjct: 395 ---TSSHAPVDTPTSSPRRDVGDPMPGAPRAGRDP-----DLPAGNPPSGAPAHPNTPTG 446
Query: 167 NASGAR 172
R
Sbjct: 447 GGPTPR 452
>gi|34534555|dbj|BAC87042.1| unnamed protein product [Homo sapiens]
Length = 980
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 4/121 (3%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT + + P T + + + P+ + + + S
Sbjct: 833 GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 892
Query: 112 GKTVVNKPTRSTSIDSL-PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V P TS + PT EE + VP ++ A+
Sbjct: 893 PAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS---PAAAVPTPEEPTSPAAAV 949
Query: 171 A 171
Sbjct: 950 P 950
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 10/113 (8%), Positives = 21/113 (18%), Gaps = 3/113 (2%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN---DSSQHDGQ 105
+ + + P P P + + +
Sbjct: 866 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPT 925
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
+ S V P TS + E + ++ P
Sbjct: 926 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEDAPHPTTHSKNP 978
>gi|229100103|ref|ZP_04231008.1| hypothetical protein bcere0020_53070 [Bacillus cereus Rock3-29]
gi|228683308|gb|EEL37281.1| hypothetical protein bcere0020_53070 [Bacillus cereus Rock3-29]
Length = 821
Score = 41.6 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 6/115 (5%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSP--SKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P AP+ + P+ +P + R + + ++ + + + S V
Sbjct: 627 PVPSGGSPAPMETSRPVPSGSSPAPVEASRPVPSGSSPAPMETPR---PVPSGSSPAPVE 683
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ + P R + S + PA S
Sbjct: 684 TPRSVPSGSSPAPMETPRPVPSGSSPVPVE-TPRSVPSGSSPAPADILTVTHSSP 737
>gi|237838523|ref|XP_002368559.1| ankyrin repeat-containing protein, conserved [Toxoplasma gondii ME49]
gi|211966223|gb|EEB01419.1| ankyrin repeat-containing protein, conserved [Toxoplasma gondii ME49]
Length = 1599
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 21/113 (18%), Gaps = 7/113 (6%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G P + AP+P P + E K P +
Sbjct: 1494 PSGEKKAPPPPPSGEKKAPLP---PPSGEKKAPPPPPSGEKKAPPPPPSGEKKAPPP--- 1547
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
P S + + K +P K
Sbjct: 1548 -PPSGEKKAPPPPPSGEKKAPPPPPSGEKKAPPLGKKKGPPLLGKKGLPPPKK 1599
>gi|150170670|ref|NP_055325.2| protein piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|119597393|gb|EAW76987.1| hCG19253, isoform CRA_c [Homo sapiens]
Length = 4928
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|119597394|gb|EAW76988.1| hCG19253, isoform CRA_d [Homo sapiens]
Length = 4919
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 8/116 (6%)
Query: 63 IREIAP--IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
I++ P P P + + + P+K + L +Q G ++ + P
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA 363
Query: 121 RSTSIDSLPT---IEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P E+ K L VG+ + P K +
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK 419
>gi|2257745|gb|AAC46362.1| ser/thr protein kinase homolog PknD [Nostoc sp. PCC 7120]
Length = 509
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 7/141 (4%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
K +++ + L + GL + +S S+ V+ P P+
Sbjct: 300 KPQGEPLRWAEPNRQKSLLIFGGLIAGGLMAGVAMSTLTRQPQSQ---TPVVSNPIPSPV 356
Query: 72 TIPLNIEDKQSPSKRDN----NTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
+ P D+ +T + Q + + +N P +
Sbjct: 357 SQIPTTAPNTPPVSPDSILPDSTEQPVAPDTPPQPETRQENPNPPAVFTPAPDNTPITAD 416
Query: 128 LPTIEERLILGLSKKELLAKN 148
P + I + + A
Sbjct: 417 TPAPQPTSIPEPENQPVPAPP 437
>gi|301618480|ref|XP_002938645.1| PREDICTED: hypothetical protein LOC100493668 [Xenopus (Silurana)
tropicalis]
Length = 2732
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 12/126 (9%), Positives = 22/126 (17%), Gaps = 7/126 (5%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQS-------PSKRDNNTVCNQLKNDSSQHDGQIQ 107
S + +R AP P P +
Sbjct: 1450 SAPLAPVQLRTGAPPAPGQPRFGAPPAPGQPRAGAPPAPGQPRAGAPPAPGQPRAGAPPA 1509
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
P + + + R T P+ ++
Sbjct: 1510 PGQPRAGAPPAPGQPRAGAPPAPGQPRASGTTVHGHPRPGVPHPLPRTGAPSPFRSRTPL 1569
Query: 168 ASGARI 173
G R+
Sbjct: 1570 GQGPRM 1575
>gi|149773456|ref|NP_055853.1| hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 27/127 (21%), Gaps = 7/127 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN---DSSQHDGQ 105
+ + + P P P + + +
Sbjct: 1002 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPT 1061
Query: 106 IQNDISGKTVVNKPTRSTSIDSL-PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
+ S V P TS + PT EE + VP ++
Sbjct: 1062 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS---PAAAVPTPEEPA 1118
Query: 165 CSNASGA 171
A+
Sbjct: 1119 SPAAAVP 1125
Score = 40.0 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 4/121 (3%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT + + P T + + + P+ + + + S
Sbjct: 969 GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 1028
Query: 112 GKTVVNKPTRSTSIDSL-PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V P TS + PT EE + VP ++ A+
Sbjct: 1029 PAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS---PAAAVPTPEEPTSPAAAV 1085
Query: 171 A 171
Sbjct: 1086 P 1086
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 14/136 (10%), Positives = 30/136 (22%), Gaps = 9/136 (6%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN---DSSQHDGQ 105
+ + + P P +P + + +
Sbjct: 1028 SPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT 1087
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG------REDTEVPA 159
+ S V P TS + E + + E+ PA
Sbjct: 1088 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPA 1147
Query: 160 MDKNFCSNASGARIAI 175
++ A +A+
Sbjct: 1148 PAVPTPEESASAAVAV 1163
>gi|261820532|ref|YP_003258638.1| diguanylate cyclase/phosphodiesterase with extracellular sensor
[Pectobacterium wasabiae WPP163]
gi|261604545|gb|ACX87031.1| diguanylate cyclase/phosphodiesterase with extracellular sensor
[Pectobacterium wasabiae WPP163]
Length = 650
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLS-----------NKESAEVIFKEFAKR- 295
Q+L+ L R G + L ++ + +
Sbjct: 437 DDPSQILH--HKVLARIQDAQG-NSIAAGRFLPWIQRFGWDTRLDQTMLREVLAYLRQHD 493
Query: 296 -GLLFFDDGSSPRNL---TRVLAPKLNLPYMVADLYL--DDQVDRDKIREKLKGLEEIAR 349
L G++ ++L T +LAP + P + L L D+ D + +L+ L ++
Sbjct: 494 GNLALSLSGTTAQDLHLLTDLLAPLKHQPDIARRLILELDENQLPDSV--QLEALIKLLN 551
Query: 350 TTGQAIGVAV--AFDESIEVISQW-LQQEHVRD 379
G A+G+ I +SQW L V
Sbjct: 552 EHGCALGLQHFGGRFNMIGNLSQWGLAYLKVDG 584
>gi|328709714|ref|XP_001947872.2| PREDICTED: ATP-dependent helicase brm-like [Acyrthosiphon pisum]
Length = 1638
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Query: 46 ISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQ 105
+ +A P P P + P ++ + NQ + S Q
Sbjct: 256 MQNAPRQPNP-PGPIPQSPVRMPQPGSTPQTQIQPPPSAQHPQSAPPNQPPSVSMNGPQQ 314
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG 151
+ G P I++ + + I G+ + + ++
Sbjct: 315 PPSMAPGI-----PQAPQQINAPQPVGQPPIGGVPQPMMGGPQQMA 355
>gi|71663656|ref|XP_818818.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884090|gb|EAN96967.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 329
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 4/122 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIED-KQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ ++++ + P + ++PS+ +N+ + + + Q
Sbjct: 136 LRSVGASPTAPPRSKKVSAAAVNSPPPTKPRSRTPSRSPSNSSTTPQRTGTEEKSATPQK 195
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
S T P RS + L K +K + + + PA + S A
Sbjct: 196 SASKDT---APKRSATPRKSTPKRAAASLTNGKSPARSKKRGSSKKSASPAKSRPSQSPA 252
Query: 169 SG 170
+
Sbjct: 253 TR 254
>gi|217970109|ref|YP_002355343.1| translation initiation factor IF-2 [Thauera sp. MZ1T]
gi|217507436|gb|ACK54447.1| translation initiation factor IF-2 [Thauera sp. MZ1T]
Length = 968
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 46/349 (13%), Positives = 97/349 (27%), Gaps = 48/349 (13%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
P + P + E K++ K +G
Sbjct: 297 AAKPTTGTLHRPAKTEDKPASREVKRTAPAAPAREADGASKRRGGMKTRGEVGATTGSNW 356
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
++R + ++ + V T D +
Sbjct: 357 RGAGKGGGRHGRNQQ-DDRSSFQAPTEPIVREVHVPETITVA---DLAHKMAVKATEVIK 412
Query: 176 VVSGLG----ISQTGTQRAINLLPANIT-LAFASNGNSLDRWMKE--AKKKGQEAILQIP 228
V+ +G I+Q Q ++ + LA A+ + D +++E A K + + + P
Sbjct: 413 VLMKMGSMVTINQVLDQETAMIIVEEMGHLAVAAKLDDPDAFLEESEAHKDA-DVLPRAP 471
Query: 229 MQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
+ V LL+ +R + + G+ + GA +
Sbjct: 472 VVTVMG----------HVDHGKTSLLDYIRRAKVAAGEFGGITQHIGAYHVETARGM--- 518
Query: 289 FKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIA 348
L F D +P + D+ + D + + + A
Sbjct: 519 --------LTFLD---TPGHEAFTAMRARGAKAT--DIVILVVAADDGVMPQTREAIHHA 565
Query: 349 RTTGQAIGV---------AVAFDESIEVISQ-WLQQEHVRDVSVVPLSC 387
+ G + V A + E+I++ + + + D VP+S
Sbjct: 566 KAAGVPLVVAINKIDKPDANPERVTQELIAESVIPEAYGGDTMFVPVSA 614
>gi|310644656|ref|YP_003949415.1| acyltransferase 3 [Paenibacillus polymyxa SC2]
gi|309249607|gb|ADO59174.1| acyltransferase 3 [Paenibacillus polymyxa SC2]
Length = 684
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 61/199 (30%), Gaps = 17/199 (8%)
Query: 11 KKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIP 70
+ +R+ + I + + + +Y++ A + S + P
Sbjct: 406 RSAVRRQVRWRWISTTATAMFCIGIGVGTVHLYVVSPDATLQAASSDEQPIAKAKAMPPL 465
Query: 71 LTIPLNIEDKQSPSKRDNNTVCNQLKND-SSQHDGQIQNDISGKTVVNKPTRST------ 123
+ + K + ++ G T +P+ ++
Sbjct: 466 HGTVSVASKEPTAIKPQGVQDSKAPSQAQTPKNTTVKAGTADGVTTKTEPSTTSKQAKSM 525
Query: 124 --------SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+I ++ + + + ++GR+ TE PA+ + N + I
Sbjct: 526 TGDGSSVTAIGDSVMLDVQSYIEEYFPGAVVDGRIGRQMTEAPAVLEQLRQNGQLGKTVI 585
Query: 176 VVSGLGISQTGTQRAINLL 194
+ LG + T+ ++ L
Sbjct: 586 I--ELGTNGAFTKDQLSDL 602
>gi|145349146|ref|XP_001419001.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579231|gb|ABO97294.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 878
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 1/128 (0%)
Query: 37 IVGLSIYILISHAFVGTISEMIPYSVIR-EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQL 95
++G + V + P R + API + + S + +
Sbjct: 384 LLGFAAAAPGELDDVSKGVKTTPPPPKRIQPAPIRSNNGVAQNGVATISAQRETVSNDGR 443
Query: 96 KNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT 155
+ + +G +PT + + + E K+ L +V +
Sbjct: 444 RRIVPVAATGPSDATNGLKRRIEPTAMNGGNGVQSAFEAPSAPAPKRVALQPTQVQQVPP 503
Query: 156 EVPAMDKN 163
P+M +
Sbjct: 504 TTPSMPQR 511
>gi|74187810|dbj|BAE24550.1| unnamed protein product [Mus musculus]
Length = 483
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 6/151 (3%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
I+ L + C I GL ++ + F + + + P+ P
Sbjct: 78 IVPILACLVSLCLCIAGLK-WVFVDKIFEYDSPTHLDPGGLGQD-PVISLDPTAASAVLV 135
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
S+ + V + GQ + PTR + + P +
Sbjct: 136 SSEAYTSPVSKAQSEAEAHVTGQGDHVAVASEPSAVPTRKNRLSAFPPLHSTP----PPF 191
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
A+ R + + ++
Sbjct: 192 PSPARTPEVRTPKSGTQPQTTETNLQTAPKL 222
>gi|296317307|ref|NP_001171766.1| G-protein coupled receptor 64 isoform 9 precursor [Homo sapiens]
Length = 987
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 208 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPKATSFAEPPDYSPVTHNVPSPIG 267
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSP-------SKRDNNTVCNQLKNDSSQHDGQ 105
I + P + + +P E SP S+ +
Sbjct: 268 EIQPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVN 327
Query: 106 IQNDISGKT-VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +T +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 328 TTSAPPVQTDIVNTSSISDLENQVLQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 387
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 388 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 442
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQT------VQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 443 ---LQVSLETQA-PENSIGTITLPSSLMNNLPAHDMELASRVQFNFFETPA 489
>gi|296317293|ref|NP_001171762.1| G-protein coupled receptor 64 isoform 5 precursor [Homo sapiens]
Length = 1001
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 222 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPKATSFAEPPDYSPVTHNVPSPIG 281
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSP-------SKRDNNTVCNQLKNDSSQHDGQ 105
I + P + + +P E SP S+ +
Sbjct: 282 EIQPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVN 341
Query: 106 IQNDISGKT-VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +T +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 342 TTSAPPVQTDIVNTSSISDLENQVLQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 401
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 402 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 456
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQT------VQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 457 ---LQVSLETQA-PENSIGTITLPSSLMNNLPAHDMELASRVQFNFFETPA 503
>gi|296317303|ref|NP_001171765.1| G-protein coupled receptor 64 isoform 8 precursor [Homo sapiens]
Length = 993
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 94/291 (32%), Gaps = 37/291 (12%)
Query: 4 DLNHP---LRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSI-----YILISH---AFVG 52
DL P L SQ I + + S Y ++H + +G
Sbjct: 214 DLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPKATSFAEPPDYSPVTHNVPSPIG 273
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSP-------SKRDNNTVCNQLKNDSSQHDGQ 105
I + P + + +P E SP S+ +
Sbjct: 274 EIQPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVN 333
Query: 106 IQNDISGKT-VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
+ +T +VN + S + + +E+ L LG + L + N+V R P M
Sbjct: 334 TTSAPPVQTDIVNTSSISDLENQVLQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLA 393
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFA-SNGNSLDRWMKEAKKKGQ 221
R+ VV +G+ + I+L ++ LA N +S + A+
Sbjct: 394 PLAQ-----RLLKVVDDIGLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPAN 448
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQT------VQQLLNRLRYSLRRGTG 266
LQ+ ++ N + TL + +L +R++++
Sbjct: 449 ---LQVSLETQA-PENSIGTITLPSSLMNNLPAHDMELASRVQFNFFETPA 495
>gi|294714081|gb|ADF30257.1| Sec24 family member C [Danio rerio]
Length = 1142
Score = 41.2 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 25/131 (19%), Gaps = 3/131 (2%)
Query: 47 SHAFVGTISEMIPYSVIR---EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD 103
S A P S + A P P +PS+ Q
Sbjct: 160 STAPSPAGPGYAPPSTAQAPISAAYTPSAPPTFPPTSSAPSQPPPTEAVAQAPPQPYYGA 219
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
V + + P + + + +
Sbjct: 220 PPPAQQPFPNAVSTFSSAGPTQPQAPPSVSQQSFPQAPAVSQPPFSTAPPPGPSQSYLQG 279
Query: 164 FCSNASGARIA 174
+ G +A
Sbjct: 280 PPMGSQGPTMA 290
>gi|166091577|ref|YP_001654027.1| putative membrane spaning protein [Bacillus thuringiensis]
gi|165875354|gb|ABY68509.1| putative membrane spaning protein [Bacillus thuringiensis]
Length = 866
Score = 41.2 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 8/132 (6%)
Query: 44 ILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP----SKRDNNTVCNQLKNDS 99
+ A G + E +P P+ P ++ SP + R + + ++
Sbjct: 655 TVRQGANEGVQTPGTVRQGTSEGSPAPVEAPKSVSSGGSPAPVEASRPVPSGSSPAPVET 714
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
+ + + S V + + P R + S + PA
Sbjct: 715 PRS---VPSGGSPAPVETPRSVPSGGSPAPVEASRPVPSGSSPAPVE-TPRSVPSGSSPA 770
Query: 160 MDKNFCSNASGA 171
S
Sbjct: 771 PADIVTMTHSSP 782
>gi|320354061|ref|YP_004195400.1| hypothetical protein Despr_1961 [Desulfobulbus propionicus DSM
2032]
gi|320122563|gb|ADW18109.1| hypothetical protein Despr_1961 [Desulfobulbus propionicus DSM
2032]
Length = 736
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 8/150 (5%)
Query: 29 LFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL--TIPLNIEDKQSPSKR 86
LL C+ I+ L+I L T ++ AP P + P + +
Sbjct: 2 RILLLCSCILTLAINALAEEP--KTAPPAGAPPLLTAPAPQPAPESKPPAWLPQPGQAPP 59
Query: 87 DNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLA 146
+ + + + K V+KP + P ++ + K
Sbjct: 60 SLSPAARPAADKPQTEKPAVSPAATAKPAVDKPAAPQQTEIAPAAKQNKTAKKNAKNNSQ 119
Query: 147 KNKVGRED----TEVPAMDKNFCSNASGAR 172
+ K + +VP + ++ AR
Sbjct: 120 RAKTTAKKFGRGNDVPPLIAGAVDDSESAR 149
>gi|59380672|gb|AAW84283.1| envelope glycoprotein [Crimean-Congo hemorrhagic fever virus]
Length = 1689
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 44/169 (26%), Gaps = 28/169 (16%)
Query: 31 LLFCTFIVGLSIYILI--------SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
+ C + GL ++A + +R P+ P +
Sbjct: 13 AVLCLQLYGLGGTHGSHNGTEHNKTNAVTTSSDSRSSEPPVRTTLPVTPDSPTVTPTTPA 72
Query: 83 PS---------KRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEE 133
+ N T L + + I G + VN T++ S PT+
Sbjct: 73 SAPEGSGEAHTSPPNTTEGPSLPESTPEPPAATSTGIPGASDVNSSTQAARDTSTPTVRT 132
Query: 134 RL-----------ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ LL+ E+T P+ A+
Sbjct: 133 GPPNSPSIPPTPQETHHPVRNLLSVTSHKPEETSAPSGSGKESPAANSP 181
>gi|257092606|ref|YP_003166247.1| Sporulation domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045130|gb|ACV34318.1| Sporulation domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 261
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 44/172 (25%), Gaps = 11/172 (6%)
Query: 10 RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAF---VGTISEMIPYSVIREI 66
RK P RKS ++ ++ + G+ YI + G + P +
Sbjct: 8 RKAPPGRKSGGGTLLGLFIGLVIGVIAVAGVVWYINKAPLPFTTTGQQPRLPPPVAGKSA 67
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKN------DSSQHDGQIQNDISGKTVVNKPT 120
P +P + + + V + + D
Sbjct: 68 TPASAEVPPVATAPVALPGKPGDPVAGEKPRFDFYKILPGKADAIPDPKPEEVKSPVSKP 127
Query: 121 RSTSIDSLPTIEERLILGLS--KKELLAKNKVGREDTEVPAMDKNFCSNASG 170
T D E + + +K G+ PA K+ S
Sbjct: 128 VETRHDETKPAEAKPTETRPVETRTAASKPAEGKPAEGKPADAKSAEGAKSS 179
>gi|326503840|dbj|BAK02706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1438
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 8/118 (6%)
Query: 47 SHAFVGTISEMIPYSVI--REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD- 103
S + + +P + + P+ P + P K Q+ S D
Sbjct: 778 SRSPRINRAAPVPPKSLPTDKATPVRPKSPPTDKATPVPPKSPPTHKATQVPPKSPLTDK 837
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
S T P S + ++ I K + R + VPA
Sbjct: 838 ATPVPPKSPLTDKATPVPPKS-----PLTDKAIPVTPKSTPTDRGTSVRPKSPVPAKA 890
Score = 36.6 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 27/120 (22%), Gaps = 1/120 (0%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD-GQIQNDI 110
+ P+P P + Q P K + S D
Sbjct: 798 KATPVRPKSPPTDKATPVPPKSPPTHKATQVPPKSPLTDKATPVPPKSPLTDKATPVPPK 857
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
S T P S + R + K + K D K+ + S
Sbjct: 858 SPLTDKAIPVTPKSTPTDRGTSVRPKSPVPAKAAVVPLKSLATDKANLVPPKSPSAGTSS 917
>gi|226292040|gb|EEH47460.1| ser/Thr protein phosphatase family protein [Paracoccidioides
brasiliensis Pb18]
Length = 754
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 30/112 (26%), Gaps = 4/112 (3%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG---KTVVNKPT 120
R P + P+ + + S + +S V N+ T
Sbjct: 412 RAGKPSTSSAPITQQPVAMSGLPGGPGASGAAPSAPSGAQPRSAGGVSQFGQAPVPNRTT 471
Query: 121 RST-SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
T + + + L K ++ V + PA + + +
Sbjct: 472 APTYQQQNQAPSQNKPAGPLPPKTTISPAPVIPNNKAKPATPQPVGAQVNVP 523
>gi|85074694|ref|XP_964254.1| hypothetical protein NCU02184 [Neurospora crassa OR74A]
gi|28926028|gb|EAA35018.1| predicted protein [Neurospora crassa OR74A]
Length = 1434
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 35/123 (28%), Gaps = 9/123 (7%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT------ 114
V + PI P +P+ + + +
Sbjct: 1185 PVGVTVCPITEAFPPATSVPAAPAAVPTGAASVPAVSAVPTGGAGVPAVSAPAVPTGGAG 1244
Query: 115 --VVNKPTRSTSIDSLPTIEERLIL-GLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
V+ P + + +P + + G + ++ V +VPA+ N A
Sbjct: 1245 VPAVSTPVVPSGVAGVPAVSAPAVPSGGADVPAVSAPAVPSGGADVPAVPSNGAPGAGVN 1304
Query: 172 RIA 174
++A
Sbjct: 1305 KVA 1307
>gi|114585379|ref|XP_516271.2| PREDICTED: proline-rich transmembrane protein 3 isoform 2 [Pan
troglodytes]
gi|114585381|ref|XP_001149591.1| PREDICTED: proline-rich transmembrane protein 3 isoform 1 [Pan
troglodytes]
Length = 982
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 15/154 (9%)
Query: 44 ILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD 103
+ + +G + ++ T P E PSK + + + +
Sbjct: 297 VSWEVSSLGPPPKQADLPDAKDSPGPQPTDPPASEAPDGPSKPERAAMNGAVPISPQRVR 356
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
G ++ + K+++ P+ E + L E GR + PA
Sbjct: 357 GAVEAPGTPKSLIPGPSDP---GPAANRTESPMGALQPDEAEE--WPGRPQSHPPAPPVQ 411
Query: 164 FCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
S + G+ + TQRA+ P
Sbjct: 412 APSTSRR----------GLIRVTTQRALGQPPPP 435
>gi|270001100|gb|EEZ97547.1| hypothetical protein TcasGA2_TC011397 [Tribolium castaneum]
Length = 1562
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ--NDI 110
I +P R I+ T P + K +PS + V + + N I
Sbjct: 810 GIVHEVPKPAPRRISAAATTPPPPNDKKAAPSTPPPSIVDGDDAQVLPKPITNEEFQNMI 869
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+ + +++ + ++ P + + + K + + V
Sbjct: 870 PPHFLKSNKSQTNNNNNNPDTVNAVTVTIKKPDPIELPPAPSGPGRV 916
>gi|242033361|ref|XP_002464075.1| hypothetical protein SORBIDRAFT_01g011870 [Sorghum bicolor]
gi|241917929|gb|EER91073.1| hypothetical protein SORBIDRAFT_01g011870 [Sorghum bicolor]
Length = 1255
Score = 40.8 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 11/132 (8%), Positives = 34/132 (25%), Gaps = 1/132 (0%)
Query: 45 LISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG 104
+ G ++ + S + P ++ + + L +
Sbjct: 256 AMQGKPPGQVAPAVRPSSLAAPVQGPAPGRPAMQVRPPGQIAPAAASPSSLPASAPVQGP 315
Query: 105 QIQNDISGKTVV-NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
+ + + + ++ SLP + + + + PA
Sbjct: 316 VPAGRPAMQVRSPGQVAPAATLTSLPAPAPPVQGPVPGRPAMQVRPPAPGQVVAPASGPQ 375
Query: 164 FCSNASGARIAI 175
A ++A+
Sbjct: 376 MQGKAPAGQVAL 387
>gi|158514816|sp|O94854|K0754_HUMAN RecName: Full=Uncharacterized protein KIAA0754
Length = 1291
Score = 40.8 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 7/122 (5%), Positives = 20/122 (16%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ + + P P P + + + + +
Sbjct: 866 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPT 925
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+ S S + + + S A
Sbjct: 926 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPA 985
Query: 169 SG 170
+
Sbjct: 986 AA 987
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 4/121 (3%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT + + P T + + + P+ + + + S
Sbjct: 833 GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 892
Query: 112 GKTVVNKPTRSTSIDSL-PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V P TS + PT EE + VP ++ A+
Sbjct: 893 PAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS---PAAAVPTPEEPTSPAAAV 949
Query: 171 A 171
Sbjct: 950 P 950
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 14/136 (10%), Positives = 30/136 (22%), Gaps = 9/136 (6%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN---DSSQHDGQ 105
+ + + P P +P + + +
Sbjct: 892 SPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT 951
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG------REDTEVPA 159
+ S V P TS + E + + E+ PA
Sbjct: 952 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPA 1011
Query: 160 MDKNFCSNASGARIAI 175
++ A +A+
Sbjct: 1012 PAVPTPEESASAAVAV 1027
>gi|284992485|ref|YP_003411039.1| 1,4-alpha-glucan branching enzyme [Geodermatophilus obscurus DSM
43160]
gi|284065730|gb|ADB76668.1| 1,4-alpha-glucan branching enzyme [Geodermatophilus obscurus DSM
43160]
Length = 957
Score = 40.8 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 58/234 (24%), Gaps = 29/234 (12%)
Query: 11 KKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIP 70
KK KR + + + + I AP
Sbjct: 88 KKATKRAPRKRAAQADAPQGEVVAEQGGTAAPVVA---------PAPIAEPGSPSGAPAG 138
Query: 71 LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPT 130
P + P++ ++ + P+ + +D+
Sbjct: 139 QPEPPS----PDPAEPSTPQAPDE----DGGAGPAETQPSETPSANTPPSAARPVDTPRP 190
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG--------LGI 182
E+ G + A G+ E + + S ++ VV G LG
Sbjct: 191 AEDA-TAGTGSEVAAATVPEGQAPAEEGLAQQEAPAEVSEEQLRAVVDGWSYAPHSVLGA 249
Query: 183 SQTGTQRAINLL-PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDES 235
+ L P +++ + + ++ G +P Q D
Sbjct: 250 HPARDGWVVRTLRPDAVSVTVV-DEDGSRHDTRQLHPGG-VFEAHLPTQPGDYR 301
>gi|332816792|ref|XP_003309829.1| PREDICTED: plexin-B1 isoform 1 [Pan troglodytes]
gi|332816794|ref|XP_003309830.1| PREDICTED: plexin-B1 isoform 2 [Pan troglodytes]
Length = 2135
Score = 40.8 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 27/125 (21%), Gaps = 18/125 (14%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS--------- 100
P AP L P P T + S
Sbjct: 685 PARGGPSPSPP-----TAPKALATPAPDTLPVEPGAPSTATASDISPGASPSLLSPWGPW 739
Query: 101 -QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLS---KKELLAKNKVGREDTE 156
+G + +P+ + + T ++LLA E
Sbjct: 740 AGSGPISSPGSTGSPLHEEPSPPSPQNGPGTAVPAPTDFRPSATPEDLLASPLSPSEVAA 799
Query: 157 VPAMD 161
VP D
Sbjct: 800 VPPAD 804
>gi|257790476|ref|YP_003181082.1| hypothetical protein Elen_0713 [Eggerthella lenta DSM 2243]
gi|257474373|gb|ACV54693.1| hypothetical protein Elen_0713 [Eggerthella lenta DSM 2243]
Length = 549
Score = 40.8 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 31/112 (27%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+E P + P P ED +P+ + + + +
Sbjct: 386 PPSAPNEPAPPANDGAGQADPDETPKPDEDSAAPTPPASPSNPENTTPPAGSETTPPEET 445
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
++ + T+ S + + SK L +E +P D
Sbjct: 446 KPPESTTPPESPETTPGSGLQEPTKEVANSSKPSLEEPTAPAQEPVNLPKAD 497
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 31/142 (21%), Gaps = 12/142 (8%)
Query: 42 IYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR------------DNN 89
L+ E P + P P +PS +
Sbjct: 320 CLSLLPEKPTVPPVEEEPPAADSPAVPPVGNTPPEEGSGDAPSGETKPPESVLPPEVNPP 379
Query: 90 TVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK 149
+ ND +G+ ++ + + PT +
Sbjct: 380 AAPEGNPPSAPNEPAPPANDGAGQADPDETPKPDEDSAAPTPPASPSNPENTTPPAGSET 439
Query: 150 VGREDTEVPAMDKNFCSNASGA 171
E+T+ P S +
Sbjct: 440 TPPEETKPPESTTPPESPETTP 461
>gi|300718539|ref|YP_003743342.1| IgA1 protease precursor [Erwinia billingiae Eb661]
gi|299064375|emb|CAX61495.1| IgA1 protease precursor [Erwinia billingiae Eb661]
Length = 1421
Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 34/128 (26%), Gaps = 5/128 (3%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR-DNNTVCNQLKNDSSQHDGQ 105
S V ++ P + + AP P E P + + +
Sbjct: 985 SETPVNPVTPSEPETSVEPDAPTEAETPAESEAPVVPETPAEPEASADPATPSEPEASAD 1044
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK---ELLAKNKVGREDTEVPAMDK 162
+T V +P ++ E ++ + A+ E + + ++
Sbjct: 1045 PVTPSEPETSV-EPDAPAEAETPAESEAPVVPETPAETEASADAETPAEPEAAKSSSPEE 1103
Query: 163 NFCSNASG 170
A
Sbjct: 1104 AAKPEAPA 1111
Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 28/108 (25%), Gaps = 3/108 (2%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKR-DNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
AP+ P E P+ + + + + ++ D + + +
Sbjct: 1014 ESEAPVVPETPAEPEASADPATPSEPEASADPVTPSEPE--TSVEPDAPAEAETPAESEA 1071
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ P E + E A E+ P + +
Sbjct: 1072 PVVPETPAETEASADAETPAEPEAAKSSSPEEAAKPEAPADPTPDKPA 1119
>gi|238501650|ref|XP_002382059.1| ubiquitin-protein ligase Ufd4, putative [Aspergillus flavus
NRRL3357]
gi|220692296|gb|EED48643.1| ubiquitin-protein ligase Ufd4, putative [Aspergillus flavus
NRRL3357]
Length = 1826
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 35/122 (28%), Gaps = 4/122 (3%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
T + + R A + P SP+ + N+ + S+ D ++
Sbjct: 19 TGAPATAARITRSAARLAAEPPPPATSGPSPANPAAGSAPNRKRKVPSRSDRSVEAPGQP 78
Query: 113 KTVV----NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
K R + G + ++++ TE P+ ++ +
Sbjct: 79 NPPSPPRRAKKQRRAASPQPAAASAAPRRGTRNRPAMSQSGPSSHPTEEPSRNQPSPPTS 138
Query: 169 SG 170
Sbjct: 139 RR 140
>gi|302392336|ref|YP_003828156.1| polysaccharide deacetylase [Acetohalobium arabaticum DSM 5501]
gi|302204413|gb|ADL13091.1| polysaccharide deacetylase [Acetohalobium arabaticum DSM 5501]
Length = 244
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 307 RNLTRVLAPKLNLPYM--VADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDES 364
+ +A +L + AD + + I + + A G I + + +
Sbjct: 160 NDQVVKVADELGYKTIMWTADTVDWQRPKPEVI---IHRVMRKAGKGG--IVLMHPTEPT 214
Query: 365 IEVISQWLQQEHVRDVSVVPLSCLAKLS 392
+ + + + + + +V +S L S
Sbjct: 215 AKALPKMIDKLRAKGYKLVTVSKLLTES 242
>gi|299741545|ref|XP_001834537.2| hypothetical protein CC1G_10855 [Coprinopsis cinerea okayama7#130]
gi|298404761|gb|EAU87261.2| hypothetical protein CC1G_10855 [Coprinopsis cinerea okayama7#130]
Length = 664
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 33/124 (26%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT N + +P T + + + S
Sbjct: 448 GTGQNAAQQPNPPSATAGTAGTDQNAAQQPTPPSATAGTAASTPPAGPAGAGTVNGSKNS 507
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
G V S+ + L+ G+++ + + ++ + E P +
Sbjct: 508 GNGVPQDTQGGGSVQIPRLKRKNLLAGVAQLPVPKELEIEYKPVEAPPKKQKATKKGKSP 567
Query: 172 RIAI 175
+AI
Sbjct: 568 ALAI 571
>gi|260825178|ref|XP_002607544.1| hypothetical protein BRAFLDRAFT_106493 [Branchiostoma floridae]
gi|229292891|gb|EEN63554.1| hypothetical protein BRAFLDRAFT_106493 [Branchiostoma floridae]
Length = 657
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 3/123 (2%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
A + +P S AP P +PS + + + + +
Sbjct: 206 APPSPDNPSVPPSTDNPSAPPSTDNPSAPPSPDNPSVPPSPDNPSAPPSPDNPSVPPSTD 265
Query: 109 DISGKTVVNKPTRSTSID--SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ S + P+ S D S P + + + + P+ D
Sbjct: 266 NPSAPPSTDNPSAPPSPDNPSAPPSPDNPSAH-PSHDNRSAPPSPDNPSVPPSPDNPSAP 324
Query: 167 NAS 169
+
Sbjct: 325 PSP 327
Score = 39.7 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 30/121 (24%), Gaps = 1/121 (0%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
T + P S AP P +PS + + + + ++
Sbjct: 216 PPSTDNPSAPPSTDNPSAPPSPDNPSVPPSPDNPSAPPSPDNPSVPPSTDNPSAPPSTDN 275
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSK-KELLAKNKVGREDTEVPAMDKNFCSNA 168
S + P+ S D+ + + + P+ D +
Sbjct: 276 PSAPPSPDNPSAPPSPDNPSAHPSHDNRSAPPSPDNPSVPPSPDNPSAPPSPDNPSAPPS 335
Query: 169 S 169
Sbjct: 336 P 336
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 7/143 (4%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC------ 92
G + +I + A + +S P + +P + P + ++ +P DN +V
Sbjct: 163 GDTPHISNNEAQLAALSPPSPDNPSAPPSPDNPSAPPSPDNPSAPPSPDNPSVPPSTDNP 222
Query: 93 -NQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG 151
D+ N + N + + + +
Sbjct: 223 SAPPSTDNPSAPPSPDNPSVPPSPDNPSAPPSPDNPSVPPSTDNPSAPPSTDNPSAPPSP 282
Query: 152 REDTEVPAMDKNFCSNASGARIA 174
+ P+ D + R A
Sbjct: 283 DNPSAPPSPDNPSAHPSHDNRSA 305
>gi|326672510|ref|XP_700597.5| PREDICTED: protein transport protein Sec24C [Danio rerio]
Length = 1142
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 25/131 (19%), Gaps = 3/131 (2%)
Query: 47 SHAFVGTISEMIPYSVIR---EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD 103
S A P S + A P P +PS+ Q
Sbjct: 160 STAPSPAGPGYAPPSTAQAPISAAYTPSAPPTFPPTSSAPSQPPPTEAVAQAPPQPYYGA 219
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
V + + P + + + +
Sbjct: 220 PPPAQQPFPNAVSTFSSAGPTQPQAPPSVSQQSFPQAPAVSQPPFSTAPPPGPSQSYSQG 279
Query: 164 FCSNASGARIA 174
+ G +A
Sbjct: 280 PPMQSQGPPMA 290
>gi|323705393|ref|ZP_08116968.1| polysaccharide deacetylase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535295|gb|EGB25071.1| polysaccharide deacetylase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 235
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 341 LKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ + + A G AI + ++E + +++ + + +S + K
Sbjct: 188 INRIVKKAH-NG-AIVLMHPTKGTVEALPTMIKELESKGYEITSVSNVLK 235
>gi|66570962|emb|CAH10285.1| merzoite surface protein 1 [Plasmodium reichenowi]
Length = 1739
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 25/124 (20%), Gaps = 4/124 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK---RDNNTVCNQLKNDSSQ-HDGQ 105
G + + + P P PS + + Q
Sbjct: 718 PAGPTGQAAQAAQEGQAVPPPQPSSATTTPPSQPSSATTTPPSQPSSATTTQPPQPSSAT 777
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ +P + +S + P +E + + VP
Sbjct: 778 TTPPSQPSSATTQPPQPSSATTTPPPQESSATTTPPSQPSSATTTLPPQPTVPQAQPEVA 837
Query: 166 SNAS 169
Sbjct: 838 PPPQ 841
Score = 39.7 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 29/110 (26%), Gaps = 10/110 (9%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P S P + P + Q P + S T
Sbjct: 746 TPPSQPSSATTTPPSQPSSATTTQPPQ----PSSATTTPPSQPSSATTQPPQPSSATTTP 801
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELL--AKNKVGRED----TEVPAMD 161
P S++ + P+ L + + A+ +V EVPA
Sbjct: 802 PPQESSATTTPPSQPSSATTTLPPQPTVPQAQPEVAPPPQEKGAEVPAAP 851
>gi|297300252|ref|XP_002805569.1| PREDICTED: hypothetical protein LOC100429127 [Macaca mulatta]
Length = 1547
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 52/174 (29%), Gaps = 15/174 (8%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P P + + + + L + Q
Sbjct: 1309 GVGEDRGPSPAEETACTRPGHS-GSDRSRPHCAHQPGEGGPGVLPSSRRQATETDGRGER 1367
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN----KVGREDTEVPAMDKNFCSN 167
++ ++P +LP + L + + VGR + PA +
Sbjct: 1368 EQSTSSEPASHAQHAALPELCWTPGAWLPPLDPSPQPGWEAWVGRGEARRPAWRQQGRPE 1427
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ RI G ++ +++ L + A N+ D W + +++GQ
Sbjct: 1428 PARKRIQ------GHAERRSRQVGALEDP----SLAPQPNTPDFWQQRVERRGQ 1471
>gi|33597569|ref|NP_885212.1| filamentous hemagglutinin/adhesin [Bordetella parapertussis 12822]
gi|33573997|emb|CAE38317.1| filamentous hemagglutinin/adhesin [Bordetella parapertussis]
Length = 3592
Score = 40.4 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 53/201 (26%), Gaps = 25/201 (12%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIE-------DKQSPSKRDNNTVCNQLKNDSSQHDG 104
G+ + S+ ++ P+ P P+ ++ +
Sbjct: 3260 GSEFSVAGKSLKKKNQVRPVETPTPDAVDGPPSRPTTPPASPQPIRATVEVSSPPPVSVA 3319
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--GREDTEVPAMDK 162
++ K +P + + + ++K E++ + KV + P + +
Sbjct: 3320 TVEVVPRPKVETAQPLPPRPVPAKAVPVAPPKVEVAKVEVVPRPKVETAQPLPPRPVVAE 3379
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
+ A ++A V + P L A + M+ A+
Sbjct: 3380 KVTTPAVQPQLAKV------ETVQPVKPETAKPLPKPLPVAKVTEAPPPVMETAQ----- 3428
Query: 223 AILQIPMQAFDESYNEDDSYT 243
P+
Sbjct: 3429 -----PLPPVKPQKATPGPVA 3444
>gi|20521149|dbj|BAA34474.2| KIAA0754 protein [Homo sapiens]
Length = 1174
Score = 40.4 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 7/122 (5%), Positives = 20/122 (16%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ + + P P P + + + + +
Sbjct: 749 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPT 808
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+ S S + + + S A
Sbjct: 809 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPA 868
Query: 169 SG 170
+
Sbjct: 869 AA 870
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 4/121 (3%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
GT + + P T + + + P+ + + + S
Sbjct: 716 GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 775
Query: 112 GKTVVNKPTRSTSIDSL-PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V P TS + PT EE + VP ++ A+
Sbjct: 776 PAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS---PAAAVPTPEEPTSPAAAV 832
Query: 171 A 171
Sbjct: 833 P 833
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 14/136 (10%), Positives = 30/136 (22%), Gaps = 9/136 (6%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN---DSSQHDGQ 105
+ + + P P +P + + +
Sbjct: 775 SPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT 834
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG------REDTEVPA 159
+ S V P TS + E + + E+ PA
Sbjct: 835 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPA 894
Query: 160 MDKNFCSNASGARIAI 175
++ A +A+
Sbjct: 895 PAVPTPEESASAAVAV 910
>gi|313245782|emb|CBY34777.1| unnamed protein product [Oikopleura dioica]
Length = 352
Score = 40.4 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 3/112 (2%)
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS---QHDGQIQNDISGKTVVNKPTRSTS 124
+ + PS++D + L++ + + + + RS S
Sbjct: 160 TTTRKKTSSASRARRPSEKDALAAASALESAAPSMLRQTSVPERGRKNSVSAVRLDRSQS 219
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
+ + P RL G+ ++ +VG + PA K R AIV
Sbjct: 220 VGAPPIKAMRLDPGIPTTSAMSTVEVGVDGVTRPARTKKLTPKGVQYRQAIV 271
>gi|158520347|ref|YP_001528217.1| hypothetical protein Dole_0330 [Desulfococcus oleovorans Hxd3]
gi|158509173|gb|ABW66140.1| hypothetical protein Dole_0330 [Desulfococcus oleovorans Hxd3]
Length = 326
Score = 40.0 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 44/150 (29%), Gaps = 12/150 (8%)
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID- 126
P T P+ + + PS + + + + +S + D
Sbjct: 90 PATETEPVAKKAAEGPSAEEQQAPSDMPPTPAEEPPAPPVEAVSDSPALTDTADPEETDI 149
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTG 186
+LPT E G + E E PA D + I IV+ +G
Sbjct: 150 ALPTSEVEAGAGTVDGTAMETTD---EMEEAPADD-------VASEIKIVIDLMGEEDLD 199
Query: 187 TQRAINLLPANITLA-FASNGNSLDRWMKE 215
+ A N LA F+ + E
Sbjct: 200 AEEAAKTTAENQALAMFSPFTPLFQKDASE 229
>gi|315044065|ref|XP_003171408.1| hypothetical protein MGYG_05954 [Arthroderma gypseum CBS 118893]
gi|311343751|gb|EFR02954.1| hypothetical protein MGYG_05954 [Arthroderma gypseum CBS 118893]
Length = 1082
Score = 40.0 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 47/167 (28%), Gaps = 9/167 (5%)
Query: 8 PLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIA 67
P P R + RL L G A P + A
Sbjct: 919 PTAAAEPSRTDSTERTAPRLNLTSR-----AGAGASWREREAAKKAAPSGEPPAADESSA 973
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
P P T+P E ++ PS+ + D+ + + + + + +
Sbjct: 974 PPPRTLPGR-EPRELPSREREPPARDLGARDALRKPSGSSGAYVPVHLRGRNS-PANGSA 1031
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK--NFCSNASGAR 172
P R + + +A++ D+E K S A R
Sbjct: 1032 PPFSARREVSSSDARPPVARSPAPPADSEGKPEAKLPPPSSGAWRPR 1078
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 6/114 (5%)
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
V + +A +P + P+ + + + + + + + + +
Sbjct: 898 VEKRLAAKKAGMPDPRLARAPPTAAAEPSRTDSTERTAPRLNLTSRAGAGASWREREAAK 957
Query: 122 STSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+ P + + GRE E+P+ ++ + GAR A+
Sbjct: 958 KAAPSGEPPAADESSAPPP------RTLPGREPRELPSREREPPARDLGARDAL 1005
>gi|238916375|ref|YP_002929892.1| hypothetical protein EUBELI_00429 [Eubacterium eligens ATCC 27750]
gi|238871735|gb|ACR71445.1| Hypothetical protein EUBELI_00429 [Eubacterium eligens ATCC 27750]
Length = 230
Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 348 ARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
A G I + + E + + + +VP+S L
Sbjct: 173 ALKNGSIILMHNGAKYTAEALESVITGLQSQGYEIVPVSQLIN 215
>gi|134078444|emb|CAK40387.1| unnamed protein product [Aspergillus niger]
Length = 1306
Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 5/120 (4%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ S + AP P + K+ + + T + + + SG T
Sbjct: 275 LDSATPSATPQPAPSNPVAPPS-AAKEVEATPEKPTPPVEPARPIASGFTPVNAGSSGFT 333
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK----NKVGREDTEVPAMDKNFCSNASG 170
VN+ +++S P ++ G + +A+ VP M + ++
Sbjct: 334 AVNRSPSFVAVNSGPAVKREADNGSLTPKSVAEHPANPSAASNGHAVPPMKRAISHESAS 393
>gi|224015671|ref|XP_002297485.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967851|gb|EED86224.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2612
Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 30/113 (26%), Gaps = 2/113 (1%)
Query: 47 SHAFVGTISEMIPYSV-IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQ 105
+ A + P + I P P P +P ++
Sbjct: 2109 TQAPITPEPTTSPSAQPATPITPSPTNSPSAQPVTPAPVTPSPTNAITAAPQTAAPITPN 2168
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
N S + V P + +++ T + ++ A + + P
Sbjct: 2169 PTNSPSAQPVTPAPVTPSPTNAI-TAAPQTSAPITPNPTNAPSAQPITNQPTP 2220
>gi|147677611|ref|YP_001211826.1| xylanase/chitin deacetylase [Pelotomaculum thermopropionicum SI]
gi|146273708|dbj|BAF59457.1| predicted xylanase/chitin deacetylase [Pelotomaculum
thermopropionicum SI]
Length = 250
Score = 40.0 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 328 LD-DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS 386
+D + + I + E A G AI + ++ + ++ + +V +S
Sbjct: 178 IDWQRPNPSVIVR---RVAEGAH-NG-AIVLMHPTAPTVHALPLIIRNLKEQGYELVKVS 232
Query: 387 CLAK 390
L +
Sbjct: 233 ALIE 236
>gi|322434815|ref|YP_004217027.1| polysaccharide deacetylase [Acidobacterium sp. MP5ACTX9]
gi|321162542|gb|ADW68247.1| polysaccharide deacetylase [Acidobacterium sp. MP5ACTX9]
Length = 1178
Score = 40.0 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 335 DKIREKLKGLEEIARTTGQAIGV---AVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
D + ++L +E G I + ++ + +Q +VP+S L
Sbjct: 664 DSVLQQLADMEAHPDRRGSIILMHDGGGDRSATVAALPMLIQALRAHGYQIVPVSELM 721
>gi|221632990|ref|YP_002522213.1| hypothetical protein trd_0997 [Thermomicrobium roseum DSM 5159]
gi|221155709|gb|ACM04836.1| hypothetical protein trd_0997 [Thermomicrobium roseum DSM 5159]
Length = 300
Score = 40.0 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 1/106 (0%)
Query: 19 FYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLN-I 77
Y R+ +L ++GL+ + + G + + VI P P PL I
Sbjct: 144 RYWTDYLRVAAPVLGIILMLGLAWFWINQFLNRGEVVPTVTPQVITGPTPTPQGTPLGLI 203
Query: 78 EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ + + + + + + + VN + +
Sbjct: 204 AVTPAATSQTPTVTASPTPRTTIGPGATVVVANTDGSGVNFRSAPS 249
>gi|213969408|ref|ZP_03397545.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301386668|ref|ZP_07235086.1| hypothetical protein PsyrptM_28741 [Pseudomonas syringae pv. tomato
Max13]
gi|302060272|ref|ZP_07251813.1| hypothetical protein PsyrptK_09796 [Pseudomonas syringae pv. tomato
K40]
gi|302132122|ref|ZP_07258112.1| hypothetical protein PsyrptN_12059 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213925779|gb|EEB59337.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 939
Score = 40.0 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 19/131 (14%)
Query: 190 AINLLPANITLAFASNGNSL-----DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTL 244
A+ PA AF D + +A G E I +P + + +
Sbjct: 71 ALERQPAP---AFVPPAQDAAPLPVDAVILQAPTAGPELIWDLPDEPQTQPTQPPEPAAA 127
Query: 245 KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS 304
+ N L ++ R N+ + V+F GL F +
Sbjct: 128 LPQPSPPATPNLLDRAIERAK------NWLLGGNTVLRVGVVVLFL-----GLAFLLRYA 176
Query: 305 SPRNLTRVLAP 315
+ + V A
Sbjct: 177 TEGVVVPVEAR 187
>gi|114630791|ref|XP_507822.2| PREDICTED: methylcytosine dioxygenase TET1 [Pan troglodytes]
Length = 2136
Score = 40.0 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 9/159 (5%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 1835 PSAPHPVKEASPGFSWSPKTASAPPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
S L + + + ++ G + P + S + +
Sbjct: 1895 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ---- 1950
Query: 177 VSGLGISQTGTQRA---INLLPANITLAFASNGNSLDRW 212
L S + P++ L+ + ++
Sbjct: 1951 --DLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKL 1987
>gi|331016072|gb|EGH96128.1| hypothetical protein PLA106_08695 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 939
Score = 40.0 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 19/131 (14%)
Query: 190 AINLLPANITLAFASNGNSL-----DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTL 244
A+ PA AF D + +A G E I +P + + +
Sbjct: 71 ALERQPAP---AFVPPAQDAAPLPVDAVILQAPTAGPELIWDLPDEPQTQPTQPPEPAAA 127
Query: 245 KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS 304
+ N L ++ R N+ + V+F GL F +
Sbjct: 128 LPQPSPPATPNLLDRAIERAK------NWLLGGNTVLRVGVVVLFL-----GLAFLLRYA 176
Query: 305 SPRNLTRVLAP 315
+ + V A
Sbjct: 177 TEGVVVPVEAR 187
>gi|301089378|ref|XP_002894995.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104066|gb|EEY62118.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 933
Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 28/113 (24%), Gaps = 2/113 (1%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS-SQHDGQIQNDIS 111
T AP T P N + LK+ + ++ D +
Sbjct: 71 TQGPYTTRPPKDTAAPEDTTAPPNDTLAPGDTDTPPKDTTAPLKDTTAPENPTTPPEDTT 130
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG-REDTEVPAMDKN 163
++ + P + S + +E+ PA +
Sbjct: 131 APPADSEAPTDMTPSPKPPADTTAPPHDSTPKPSEPTPAPTKEEEPTPAPTRP 183
>gi|119574684|gb|EAW54299.1| CXXC finger 6 [Homo sapiens]
Length = 2150
Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 9/159 (5%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 1849 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1908
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
S L + + + ++ G + P + S + +
Sbjct: 1909 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ---- 1964
Query: 177 VSGLGISQTGTQRA---INLLPANITLAFASNGNSLDRW 212
L S + P++ L+ + ++
Sbjct: 1965 --DLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKL 2001
>gi|89094427|ref|ZP_01167367.1| hypothetical protein MED92_16845 [Oceanospirillum sp. MED92]
gi|89081319|gb|EAR60551.1| hypothetical protein MED92_16845 [Oceanospirillum sp. MED92]
Length = 648
Score = 40.0 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 84/314 (26%), Gaps = 29/314 (9%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
+ + T + + P P + + N
Sbjct: 191 TSSPQSTQAPNSAIVSAQATPPNASGTPAQSAGATTTISQPTPQTPLPTANQGQAQAIHT 250
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
Q+ T P S + + PT + L G + + N R +T ++
Sbjct: 251 QSPNQAVTPQAGPISSPPLTNTPTESKGLASGSGQPPQTSNNTGPRSNTLSTTPNQPAPQ 310
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPAN------ITLAFASNGNSLDRWMKEAKKKG 220
+A T ++ P+ +TLA +G+ L+ + +G
Sbjct: 311 SAGT----------------TTAPVSPRPSGPPIHHVVTLA-LPDGSKLETVAAKPLPQG 353
Query: 221 QEAILQIPM-QAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRR---GTGYFGVMNYRGA 276
+ L+ Q + T + LR SL F + +
Sbjct: 354 AQIQLEKSSGQELQILRMREPPLTQASALEKPAIQEVLRNSLPNQIPTGNAFSQLAATVS 413
Query: 277 MLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDK 336
+ + + + L GSS +L L +
Sbjct: 414 NETAQAGQISGVVRSMLQ--LFGVRPGSSEATSQIRNNVELGGYGTERTLSKGFVPQPQE 471
Query: 337 IREKLKGLEEIART 350
+R +L L+++A
Sbjct: 472 MRSQLNQLQQLAEK 485
>gi|109065848|ref|XP_001086876.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
B-like [Macaca mulatta]
Length = 814
Score = 40.0 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 29/117 (24%), Gaps = 6/117 (5%)
Query: 57 MIPYSVIREIAP---IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK 113
+P + P P P E P+ SS+ + +
Sbjct: 8 AVPEAAEERAEPGQQQPAAEPPPDEGLLRPAGPGAPEAAGT--EASSEEVAVAEAGPEPE 65
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V +P P+ A+ V + ++ C+++
Sbjct: 66 -VRTEPAAEAEAAFGPSESLSPPAAEEPPGSHAEPPVPAQGEAPGERARDECADSRA 121
>gi|156139122|ref|NP_085128.2| methylcytosine dioxygenase TET1 [Homo sapiens]
gi|115502139|sp|Q8NFU7|TET1_HUMAN RecName: Full=Methylcytosine dioxygenase TET1; AltName:
Full=CXXC-type zinc finger protein 6; AltName:
Full=Leukemia-associated protein with a CXXC domain;
AltName: Full=Ten-eleven translocation 1 gene protein
gi|55665382|emb|CAH70220.1| leukemia-associated protein with a CXXC domain [Homo sapiens]
gi|55961944|emb|CAI15118.1| leukemia-associated protein with a CXXC domain [Homo sapiens]
gi|225000490|gb|AAI72365.1| Tet oncogene 1 [synthetic construct]
Length = 2136
Score = 40.0 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 9/159 (5%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
S L + + + ++ G + P + S + +
Sbjct: 1895 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ---- 1950
Query: 177 VSGLGISQTGTQRA---INLLPANITLAFASNGNSLDRW 212
L S + P++ L+ + ++
Sbjct: 1951 --DLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKL 1987
>gi|28872278|ref|NP_794897.1| hypothetical protein PSPTO_5166 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855532|gb|AAO58592.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 939
Score = 40.0 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 19/131 (14%)
Query: 190 AINLLPANITLAFASNGNSL-----DRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTL 244
A+ PA AF D + +A G E I +P + + +
Sbjct: 71 ALERQPAP---AFVPPAQDAAPLPVDAVILQAPTAGPELIWDLPDEPQTQPTQPPEPAAA 127
Query: 245 KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS 304
+ N L ++ R N+ + V+F GL F +
Sbjct: 128 LPQPSPPATPNLLDRAIERAK------NWLLGGNTVLRVGVVVLFL-----GLAFLLRYA 176
Query: 305 SPRNLTRVLAP 315
+ + V A
Sbjct: 177 TEGVVVPVEAR 187
>gi|22001093|gb|AAM88301.1|AF430147_1 leukemia-associated protein with a CXXC domain [Homo sapiens]
Length = 2136
Score = 40.0 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 9/159 (5%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
S L + + + ++ G + P + S + +
Sbjct: 1895 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ---- 1950
Query: 177 VSGLGISQTGTQRA---INLLPANITLAFASNGNSLDRW 212
L S + P++ L+ + ++
Sbjct: 1951 --DLASSPMEEDEQHSEADEPPSDEPLSDDPLSPAEEKL 1987
>gi|46134197|ref|XP_389414.1| hypothetical protein FG09238.1 [Gibberella zeae PH-1]
Length = 681
Score = 40.0 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 28/127 (22%), Gaps = 15/127 (11%)
Query: 45 LISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG 104
+ + G + A IP P + + P +
Sbjct: 407 GFNFSHRGAKQQPGVPPTTAGPAGIPSPAPPSTQSSAPPPTSRQPSAVQAKPAV------ 460
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
T + P + + PT L + KE + + A ++
Sbjct: 461 --------ATPLPGPPKPATPQPAPTSSS-PALSANNKETEKTSASAGANGSAHAPERVS 511
Query: 165 CSNASGA 171
Sbjct: 512 SPAPKTP 518
>gi|170726385|ref|YP_001760411.1| ribonuclease [Shewanella woodyi ATCC 51908]
gi|169811732|gb|ACA86316.1| ribonuclease, Rne/Rng family [Shewanella woodyi ATCC 51908]
Length = 1142
Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 30/117 (25%), Gaps = 4/117 (3%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC----NQLKNDSSQHDGQIQNDISGK 113
P AP P+ +P+K + K+++ +
Sbjct: 933 TPVKAEATSAPTKPETPVKAAATSAPTKPEAPVKAEATSAPTKSEAPVKAAATSAPTKPE 992
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V S ++ +K E K T+ A K S AS
Sbjct: 993 APVKAAATSAPTKPEAPVKAAATSAPTKPEAPVKAAATSAPTKPEAPVKAEASTASA 1049
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 26/131 (19%), Gaps = 5/131 (3%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQL-----KNDSSQ 101
+ A P AP P+ E +P+K + +
Sbjct: 907 TEATAAPAKSEAPVKAEATSAPTKPETPVKAEATSAPTKPETPVKAAATSAPTKPEAPVK 966
Query: 102 HDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ S V T + + P + + +
Sbjct: 967 AEATSAPTKSEAPVKAAATSAPTKPEAPVKAAATSAPTKPEAPVKAAATSAPTKPEAPVK 1026
Query: 162 KNFCSNASGAR 172
S +
Sbjct: 1027 AAATSAPTKPE 1037
>gi|67924478|ref|ZP_00517901.1| Protein kinase [Crocosphaera watsonii WH 8501]
gi|67853675|gb|EAM49011.1| Protein kinase [Crocosphaera watsonii WH 8501]
Length = 504
Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 16/162 (9%)
Query: 6 NHPLRKKTPKRKS------FYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIP 59
N L +P+R S + LG FL I GL + I+ +GT P
Sbjct: 289 NSSLSPPSPQRPSNTTQENQPPWALLALGSFLAASAIIGGLMLGIV-----LGTKERSQP 343
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-----T 114
S + P P P R + + +++ + + T
Sbjct: 344 TSSPSVLPESPKETPTPELSPPKPRNRRPVNNRRSQPSPTPFPTPEVEVSPTPEVKASPT 403
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE 156
+ + + +++ PT+ + + + E
Sbjct: 404 PEVEASPTPEVEASPTLTPIPEPTKAVPIPVEPPPQSSDPKE 445
>gi|303274695|ref|XP_003056663.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461015|gb|EEH58308.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 732
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 18/175 (10%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
R+ + + P + + + + + +++ + +++ +
Sbjct: 401 RDGSVLSAVTPEMLASEDPFYRDLGAKLAVGMP---------LRDIATSDSIILREIPKP 451
Query: 124 SIDSLPTIEERL----ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS-GARIAIVVS 178
+ RL + L+ + LAK V V A D + AR+A+V+
Sbjct: 452 DDEKANRSIRRLQEIGVGVLAPVDALAKTPVANAIAMVAAKDAATATIPDCAARVAVVID 511
Query: 179 GLGISQTGTQRAINLLPANITLAFAS---NGNSLDRWMKEAKKKGQEAILQIPMQ 230
G S+ A+ P +A A ++ R + + G + MQ
Sbjct: 512 GT-ESEEEIVAALATDPVMCLIATAPGVSRLHASRRVFEWMHRAGSAVPVIHNMQ 565
>gi|307718349|ref|YP_003873881.1| hypothetical protein STHERM_c06490 [Spirochaeta thermophila DSM
6192]
gi|306532074|gb|ADN01608.1| hypothetical protein STHERM_c06490 [Spirochaeta thermophila DSM
6192]
Length = 243
Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 67/242 (27%), Gaps = 43/242 (17%)
Query: 156 EVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
P +A+ G T R ++ L T + + + + E
Sbjct: 24 PAPREATPTSGGTQVKLVALTFDD-GPDPVMTPRVLDKLE---TYGVKATFFVIGQLVNE 79
Query: 216 AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRG 275
E I+++ + + S+ + T +++ + + + Y G
Sbjct: 80 RTTPVLERIVRMGCEIGNHSWGWESMNT----MPPEEIEESVDKTTKAIEKYAGTTP--- 132
Query: 276 AML-----LSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDD 330
L+ ++ + G+L FD A + A LD
Sbjct: 133 -RFFRPPNLAVSDTMYEVIDLPFASGILAFD-----------WAGQNTTAEQRAKHVLDA 180
Query: 331 QVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
D I E E++++I + + + V LS L +
Sbjct: 181 VRDGAIILMHDVQPEP------------HPTPEALDII---IPELLAQGYEFVTLSELFE 225
Query: 391 LS 392
Sbjct: 226 RK 227
>gi|50549811|ref|XP_502377.1| YALI0D03740p [Yarrowia lipolytica]
gi|49648245|emb|CAG80565.1| YALI0D03740p [Yarrowia lipolytica]
Length = 611
Score = 39.7 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 37/144 (25%), Gaps = 19/144 (13%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG----- 104
T S+ P P P + + +P + S+
Sbjct: 446 PQPTESKPAASPKPESSKPAPAPKPESSKPAPAPQPESSKPAPAPKPESSAPATKPQPTA 505
Query: 105 ----QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVG--------- 151
Q + +T KP +S+ P+++ ++ +
Sbjct: 506 APKPQPEQPSKPETPAAKPEQSSPAPQQPSVKPEQSSPAPQQPSVKPEPAPAPQQSGQPQ 565
Query: 152 -REDTEVPAMDKNFCSNASGARIA 174
+ P+ +AS + A
Sbjct: 566 KPGNGGSPSQPAQAQPSASTPQQA 589
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 22/115 (19%), Gaps = 5/115 (4%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
T +E + AP P P S
Sbjct: 429 TPTESSEKPQTEKPAPKPQPTESKPAASPKPESSKP--APAPKPESSKPAPAPQPESSKP 486
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ + + PT + K + + + PA +
Sbjct: 487 APAPKPESSAPATKPQPTAAPKPQPEQPSKP---ETPAAKPEQSSPAPQQPSVKP 538
>gi|322821676|gb|EFZ27934.1| hypothetical protein TCSYLVIO_5845 [Trypanosoma cruzi]
Length = 264
Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIED-KQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ ++++ + P + ++PS+ +N+ + D+ + +
Sbjct: 71 LRSVGASPTAPPRSKKVSAAAVNSPPPTKPRSRTPSRSPSNSSTTPQRTDTEEKSATPRK 130
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
S T P RS + L K +K + + + PA + S A
Sbjct: 131 SASKDT---APKRSATPRKSTPKRAAASLTNGKSPARSKKRGRSKKSASPAKSRPSQSPA 187
Query: 169 SG 170
+
Sbjct: 188 TR 189
>gi|322383049|ref|ZP_08056877.1| secreted deoxyriboendonuclease-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321152818|gb|EFX45443.1| secreted deoxyriboendonuclease-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 270
Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++IE + Q L + R V +S L + +
Sbjct: 230 QTIEALKQILPELKKRGFRFVTVSELMRQRN 260
>gi|167464375|ref|ZP_02329464.1| peptidoglycan N-acetylglucosamine deacetylase [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 263
Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++IE + Q L + R V +S L + +
Sbjct: 223 QTIEALKQILPELKKRGFRFVTVSELMRQRN 253
>gi|332366393|gb|EGJ44144.1| subtilisin family serine protease [Streptococcus sanguinis SK355]
Length = 1526
Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 61/207 (29%), Gaps = 39/207 (18%)
Query: 11 KKTPKRKSFYSQIISRLGLF--LLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI-- 66
K+T ++ +S + GL LL + G A V + + P + +
Sbjct: 17 KETSMQRQRFSLRKYKFGLASVLLGTALVFGAGQAQADEQATVSSSGQGQPTAAVVSATE 76
Query: 67 ----APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQ--------IQNDIS--- 111
A P + P+ + + + +V + + S + ++ +
Sbjct: 77 SASQAATPESQPVTPAAVEKAAPASSESVASSTEQASQPSTAEAKEAAAAPVEKGATSSS 136
Query: 112 ------------GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
T +KPT S S + + +A++ R+
Sbjct: 137 EEASSSAEKVTQPSTTESKPTESASPTVESPAAVNSDKPAANPDAVAESPTSRDAKPSSI 196
Query: 160 -------MDKNFCSNASG-ARIAIVVS 178
+ + + G R+ ++
Sbjct: 197 STNEIIKVPQTWSQGYKGQGRVVAIID 223
>gi|241888531|ref|ZP_04775839.1| hypothetical protein GEMHA0001_0073 [Gemella haemolysans ATCC
10379]
gi|241864798|gb|EER69172.1| hypothetical protein GEMHA0001_0073 [Gemella haemolysans ATCC
10379]
Length = 978
Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 9/131 (6%), Positives = 25/131 (19%), Gaps = 7/131 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDK-------QSPSKRDNNTVCNQLKNDSSQ 101
A AP P +P + T +++ ++
Sbjct: 366 APKAEEPAAPAPKAEEPAAPAPKVEEPATPAPKAEEPAAPAPKAEEPATPAPKVEEPAAP 425
Query: 102 HDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ + ++ + + + E PA
Sbjct: 426 SPKAEEPAAPSPKAEEPAAPALKVEEPAAPAPKAEEPAAPSPKAEEPAAPALKVEEPAAP 485
Query: 162 KNFCSNASGAR 172
+ +
Sbjct: 486 APKAEEPTAPK 496
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 11/130 (8%), Positives = 24/130 (18%), Gaps = 7/130 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS--PSKRDN----NTVCNQLKNDSSQH 102
A V AP P ++ P+ + +
Sbjct: 296 APKAEEPAASAPKVEEPAAPAPKVEEPATPAPKAEEPATPAPKAEEPAAPAPKAEEPATP 355
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLP-TIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ + +P P ++ + + E PA
Sbjct: 356 APKAEEIGVPAPKAEEPAAPAPKAEEPAAPAPKVEEPATPAPKAEEPAAPAPKAEEPATP 415
Query: 162 KNFCSNASGA 171
+
Sbjct: 416 APKVEEPAAP 425
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 24/130 (18%), Gaps = 7/130 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS--PSKRDNNTVCNQLKNDSSQHDGQI 106
A P P ++ P+ + ++
Sbjct: 316 APKVEEPATPAPKAEEPATPAPKAEEPAAPAPKAEEPATPAPKAEEIGVPAPKAEEPAAP 375
Query: 107 ----QNDISGKTVVNKPTRSTSIDSLP-TIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ + V +P P + + + + E PA
Sbjct: 376 APKAEEPAAPAPKVEEPATPAPKAEEPAAPAPKAEEPATPAPKVEEPAAPSPKAEEPAAP 435
Query: 162 KNFCSNASGA 171
+
Sbjct: 436 SPKAEEPAAP 445
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 25/130 (19%), Gaps = 7/130 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS--PSKRDN----NTVCNQLKNDSSQH 102
A P P ++ P+ + +
Sbjct: 346 APKAEEPATPAPKAEEIGVPAPKAEEPAAPAPKAEEPAAPAPKVEEPATPAPKAEEPAAP 405
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLP-TIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ + + V +P + P + + + + E PA
Sbjct: 406 APKAEEPATPAPKVEEPAAPSPKAEEPAAPSPKAEEPAAPALKVEEPAAPAPKAEEPAAP 465
Query: 162 KNFCSNASGA 171
+
Sbjct: 466 SPKAEEPAAP 475
Score = 36.2 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 14/126 (11%), Positives = 23/126 (18%), Gaps = 3/126 (2%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDK--QSPSKRDNNTVCNQLKNDSSQHDGQI 106
A AP P + P+ ++
Sbjct: 276 APKAEGPAAPAPKAEEPAAPAPKAEEPAASAPKVEEPAAPAPKVEEPATPAPKAEEPATP 335
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ P P EE + +E A E + +
Sbjct: 336 APKAE-EPAAPAPKAEEPATPAPKAEEIGVPAPKAEEPAAPAPKAEEPAAPAPKVEEPAT 394
Query: 167 NASGAR 172
A A
Sbjct: 395 PAPKAE 400
Score = 36.2 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 24/125 (19%), Gaps = 8/125 (6%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
A AP P E S K + + + + +
Sbjct: 246 APKAEEPAAPAPKAEEPAAPA----PKAEEPAASAPKAEGPAAPAPKAEEPAAPAPKAEE 301
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+ V +P P ++ K P ++
Sbjct: 302 PAASAPKVEEPAAPAPKVEEPATPAPKA----EEPATPAPKAEEPAAPAPKAEEPATPAP 357
Query: 169 SGARI 173
I
Sbjct: 358 KAEEI 362
>gi|255081933|ref|XP_002508185.1| dynein alpha chain, flagellar outer arm [Micromonas sp. RCC299]
gi|226523461|gb|ACO69443.1| dynein alpha chain, flagellar outer arm [Micromonas sp. RCC299]
Length = 4434
Score = 39.7 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 1/116 (0%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P + + P D + P+ D + + DG+ + T
Sbjct: 657 PAPAEEPELADVVEESEPPAPADGEPPAPADGEEPPAPVASGEPAADGEAEPPAEEATPA 716
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD-KNFCSNASGA 171
+ + + SK E G T P+ + A+GA
Sbjct: 717 DGDAEPAADGDEAKSADGDGAASSKGEGAGDEGAGSVSTPAPSTPVRPLSPEAAGA 772
>gi|26339516|dbj|BAC33429.1| unnamed protein product [Mus musculus]
Length = 296
Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 6/151 (3%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
I+ L + C I GL ++ + F + + + P+ P
Sbjct: 78 IVPILACLVSLCLCIAGLK-WVFVDKIFEYDSPTHLDPGGLGQD-PVISLDPTAASAVLV 135
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
S+ + V + GQ + PTR + + P +
Sbjct: 136 SSEAYTSPVSKAQSEAEAHVTGQGDHVAVASEPSAVPTRKNRLSAFPPLHSTP----PPF 191
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
A+ R + + ++
Sbjct: 192 PSPARTPEVRTPKSGTQPQTTETNLQTAPKL 222
>gi|124377986|ref|NP_848706.2| pro-neuregulin-1, membrane-bound isoform [Mus musculus]
gi|49659889|gb|AAT68240.1| neuregulin-1 type III beta1-a [Mus musculus]
gi|182888497|gb|AAI60344.1| Neuregulin 1 [synthetic construct]
gi|187956451|gb|AAI51114.1| Neuregulin 1 [Mus musculus]
Length = 700
Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 6/151 (3%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
I+ L + C I GL ++ + F + + + P+ P
Sbjct: 78 IVPILACLVSLCLCIAGLK-WVFVDKIFEYDSPTHLDPGGLGQD-PVISLDPTAASAVLV 135
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
S+ + V + GQ + PTR + + P +
Sbjct: 136 SSEAYTSPVSKAQSEAEAHVTGQGDHVAVASEPSAVPTRKNRLSAFPPLHSTP----PPF 191
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
A+ R + + ++
Sbjct: 192 PSPARTPEVRTPKSGTQPQTTETNLQTAPKL 222
>gi|317142756|ref|XP_001819073.2| ubiquitin-protein ligase Ufd4 [Aspergillus oryzae RIB40]
Length = 1803
Score = 39.7 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 32/112 (28%), Gaps = 4/112 (3%)
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV----NK 118
R A + P SP+ + N+ + S+ D ++ K
Sbjct: 6 TRSAARLAAEPPPPATSGPSPANPAAGSAPNRKRKVPSRSDRSVEAPGQPNPPSPPRRAK 65
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
R + G + ++++ TE P+ ++ +
Sbjct: 66 KQRRAASPQPAAASAAPRRGTRNRPAMSQSGPSSHPTEEPSRNQPSPPTSRR 117
>gi|319947303|ref|ZP_08021536.1| wall-associated protein [Streptococcus australis ATCC 700641]
gi|319746545|gb|EFV98805.1| wall-associated protein [Streptococcus australis ATCC 700641]
Length = 471
Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 1/115 (0%)
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
+ P P P + PS + S + + +P++
Sbjct: 336 KEQTPPTPDPEPSKPQPDPKPSPDPEPSRPQPDPKPSPDPEPSKPQPDPKPSPDPEPSKP 395
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVV 177
D P+ + + + ++ E P K ++G ++ V+
Sbjct: 396 QP-DPKPSPDPEPSKSQPDPKSSNSSSTSVKEEEAPKPGKKKVLPSTGEKMTPVI 449
>gi|73948530|ref|XP_541714.2| PREDICTED: similar to low density lipoprotein receptor-related
protein 3 [Canis familiaris]
Length = 704
Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 42/168 (25%), Gaps = 15/168 (8%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVI 63
+L +R++ + S RLG + A G I +
Sbjct: 516 NLRTAMRRQMRRHASRRGPSRRRLGRL---------WNRLFHRPRAPRGQIPLLTAARTS 566
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ + L P +P+ R ++ + G+ S P S
Sbjct: 567 QTVLGDGLLQPAPGTSPDAPAPRTDSGSPAAAADGPPSAPGRAPEVGS-----AGPPPSG 621
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD-KNFCSNASG 170
D ++ + PA D + AS
Sbjct: 622 LRDPGCRRGDKDRKACRDPPGDSPAPADMPREPCPAQDPQPAAPTASS 669
>gi|302505719|ref|XP_003014566.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS
112371]
gi|291178387|gb|EFE34177.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS
112371]
Length = 1862
Score = 39.7 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 38/165 (23%), Gaps = 14/165 (8%)
Query: 5 LNHPLRKKTPKRK-SFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVI 63
+N P K P+ Q +L + I S S T+ P
Sbjct: 1680 MNTP--KAIPQPPVPRSPQPQPQLQVASQAPNQIQSPSQISASSQGRSETVPPQAPPPTQ 1737
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
P + P++ P + T P ++
Sbjct: 1738 SRPVQGPASAPVSS----GPPTLPTPQAPVPAPRAQDPATSICRAPSDPSTPTLAPAAAS 1793
Query: 124 SIDSLP-------TIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ P I ++ ++ L K R P
Sbjct: 1794 VSQASPVSLQAQQPISPSIVSPANRSNLGEKATQPRSTQPSPLPP 1838
>gi|326923647|ref|XP_003208046.1| PREDICTED: protein transport protein Sec24C-like isoform 2
[Meleagris gallopavo]
Length = 1150
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 26/129 (20%), Gaps = 3/129 (2%)
Query: 31 LLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNT 90
+ G Y G + IP S P L S+
Sbjct: 101 ASGTSLPSGHQGYSQFGQ---GDVQNGIPTSTAPMQRPPASQPFLPGSAPAPVSQPSTFQ 157
Query: 91 VCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV 150
+ Q + G T ++ P + PT + S
Sbjct: 158 QYGPPPSSVQQLSNHMAGMTIGSTSISAPPPAGLGYGPPTSVPPVSGSFSATGSGLYAPY 217
Query: 151 GREDTEVPA 159
P
Sbjct: 218 TASQGPPPP 226
Score = 36.6 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 26/114 (22%), Gaps = 9/114 (7%)
Query: 59 PYSVIREIAP-IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P S +++++ + + P + S + T
Sbjct: 162 PPSSVQQLSNHMAGMTIGSTSISAPPPAGLGYGPPTSVPPVSGSFSATGSGLYAPYTASQ 221
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
P + LP + R TEVP S G
Sbjct: 222 GPPPPSVPQGLPLAQ--------PPFSGQPVPTQRLPTEVPGFAPPPSSTGIGP 267
>gi|330800279|ref|XP_003288165.1| hypothetical protein DICPUDRAFT_78981 [Dictyostelium purpureum]
gi|325081795|gb|EGC35298.1| hypothetical protein DICPUDRAFT_78981 [Dictyostelium purpureum]
Length = 796
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 18/100 (18%), Gaps = 4/100 (4%)
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
AP P E + + S +
Sbjct: 188 TPAPTESPTPAPTESPTPSPTESPTPAPTESPTPAPTESPTPAPTESPTPAPTESPTPAP 247
Query: 125 IDS---LPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+S PT S ++ TE P
Sbjct: 248 TESPTPAPTESPTPAPTESPTPAPTESPT-PAPTESPTPA 286
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 9/100 (9%), Positives = 19/100 (19%), Gaps = 4/100 (4%)
Query: 71 LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS--- 127
P E + + S + +S
Sbjct: 186 SPTPAPTESPTPAPTESPTPSPTESPTPAPTESPTPAPTESPTPAPTESPTPAPTESPTP 245
Query: 128 LPTIEERLILGLSKKELLAKNKV-GREDTEVPAMDKNFCS 166
PT S ++ ++ PA ++
Sbjct: 246 APTESPTPAPTESPTPAPTESPTPAPTESPTPAPTESPTP 285
>gi|313224497|emb|CBY20287.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 3/112 (2%)
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS---QHDGQIQNDISGKTVVNKPTRSTS 124
+ + PS++D + L++ + + + + RS S
Sbjct: 115 TTTRKKTSSASRARRPSEKDALAAASALESAAPSMLRQTSVPERGRKNSVSAVRLDRSQS 174
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
+ + P RL G+ ++ +VG + PA K R AIV
Sbjct: 175 VGAPPIKAMRLDPGIPTTSAMSTVEVGVDGVTRPARTKKLTPKGVQYRQAIV 226
>gi|148700825|gb|EDL32772.1| mCG130630 [Mus musculus]
Length = 692
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 6/151 (3%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
I+ L + C I GL ++ + F + + + P+ P
Sbjct: 78 IVPILACLVSLCLCIAGLK-WVFVDKIFEYDSPTHLDPGGLGQD-PVISLDPTAASAVLV 135
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
S+ + V + GQ + PTR + + P +
Sbjct: 136 SSEAYTSPVSKAQSEAEAHVTGQGDHVAVASEPSAVPTRKNRLSAFPPLHSTP----PPF 191
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
A+ R + + ++
Sbjct: 192 PSPARTPEVRTPKSGTQPQTTETNLQTAPKL 222
>gi|51892927|ref|YP_075618.1| polysaccharide deacetylase [Symbiobacterium thermophilum IAM 14863]
gi|51856616|dbj|BAD40774.1| polysaccharide deacetylase [Symbiobacterium thermophilum IAM 14863]
Length = 343
Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Query: 333 DRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLA 389
+I E + G I + +++V+ Q + R +V LS +
Sbjct: 270 TPARILETFQKA-----KAGDLILM-HPKPNTVQVLEQAIDLLQSRGYRLVTLSEML 320
>gi|302695121|ref|XP_003037239.1| hypothetical protein SCHCODRAFT_103871 [Schizophyllum commune H4-8]
gi|300110936|gb|EFJ02337.1| hypothetical protein SCHCODRAFT_103871 [Schizophyllum commune H4-8]
Length = 969
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 4/121 (3%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK 113
E E P+P ++P+++ V L + + +
Sbjct: 95 EPEAETTKEKAEPKPVPAVKKPMASPTKAPARKPGAPVRKVLASGKFGAEKPATAKPTTA 154
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
+ + PT R L R + P+ K A R+
Sbjct: 155 AKPTATSAAKEPVKRPTHAARPSLSGKPPATAHPTPAARRASVAPSGAKP----AVTGRV 210
Query: 174 A 174
A
Sbjct: 211 A 211
>gi|269796922|ref|YP_003316377.1| hypothetical protein Sked_36570 [Sanguibacter keddieii DSM 10542]
gi|269099107|gb|ACZ23543.1| conserved repeat protein [Sanguibacter keddieii DSM 10542]
Length = 1923
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
E P V AP T P +D + + ++ + D G T
Sbjct: 22 EPAPVVVTTPAAPEDATTPAAGDDAAATEGSEGTEGAAPSEDLPADDDATDTEGTEG-TA 80
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKE 143
+ +T D P + R + L+ +
Sbjct: 81 ADGTADTTGTDEAPAPQRRDVGALAVDD 108
>gi|224083604|ref|XP_002193023.1| PREDICTED: sorting nexin 19 [Taeniopygia guttata]
Length = 943
Score = 39.3 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 15/137 (10%)
Query: 40 LSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRD-NNTVCNQLKND 98
L + S G P P+P ++P + +P++ + L+ +
Sbjct: 245 LLLIGAFSKKPRGGKPHPAP--------PVPDSLPFPAQTDAAPARLPLSPRAAEGLRRE 296
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK-----ELLAKNKVGRE 153
+ + + R ++ SL E + + ELLA + G
Sbjct: 297 AGAAGQEGEEVSRSCHAEESFLRPQALGSLFPCEGLELESPAPDMGQEVELLAPSPAGEL 356
Query: 154 DTEVPAMDKNFCSNASG 170
E P D + + A
Sbjct: 357 LDE-PLQDPSVPAGAPA 372
>gi|311277288|ref|XP_001925816.2| PREDICTED: disintegrin and metalloproteinase domain-containing
protein 8 [Sus scrofa]
Length = 784
Score = 39.3 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 31/129 (24%), Gaps = 8/129 (6%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ P + AP P P + PS+ T
Sbjct: 654 PLFPGGHGTPGASK---APAPSVCPPELVPASDPSQHPKPTASPLTPKRPPPAPPA--AM 708
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN---FCS 166
S V P + + L K+++ N P
Sbjct: 709 SSPLFPVPVYAPQAPGQLRPAPPAKPLPVLKPKQVVKPNCAPPMPPVKPGAGGAQPGPPQ 768
Query: 167 NASGARIAI 175
A+G ++A+
Sbjct: 769 GAAGPKVAL 777
>gi|194760563|ref|XP_001962509.1| GF14409 [Drosophila ananassae]
gi|190616206|gb|EDV31730.1| GF14409 [Drosophila ananassae]
Length = 2194
Score = 39.3 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 62/251 (24%), Gaps = 37/251 (14%)
Query: 17 KSFYSQIISRLGLFL--LFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIP 74
+ +GL LF G S +H G I + P + + E AP P
Sbjct: 813 PPSVANAPPSVGLASVPLFAAPPTGSSAIPFFNHQPTGEIKQETPPAQVIEEAPQPPVQE 872
Query: 75 LNIEDKQS----PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPT 130
+ P T + + + Q +++ ++ V + + +
Sbjct: 873 PSAAPPVGLTSVPLFAAPPTGSSAIPFFNPQPPSEVREEVPPPQVTEEAPQPPVQELFAN 932
Query: 131 IE------------------ERLILGLSKKELLAKNKVGRED----TEVPAMDKNFCSNA 168
E GL+ L A G P + A
Sbjct: 933 PEIVQGVTSAVIAPPPSVAYPPPAAGLASVPLFAAPPTGASAIPFFNPQPTAEIPPAQEA 992
Query: 169 SGARIAIVVSGLGISQTGTQRA-INLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
G + Q TQ P T A + + K +
Sbjct: 993 EGPSV--------QDQPSTQGIPFFAPPPAATSGVALFTPQPTQQPEAEKDQCSALFAPP 1044
Query: 228 PMQAFDESYNE 238
P Q E E
Sbjct: 1045 PSQPKVEPPQE 1055
Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 9/120 (7%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQ-SPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
G SE + + P+++P IE P + V Q GQ+ N
Sbjct: 575 GGASESVAAPPVGGFFAPPVSVPAPIESNPFPPGAPPSGPVGVFTPGAGPQPVGQVFN-- 632
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
++ + P+ + + PT G L V P+ +
Sbjct: 633 -PESSIPGPSTTPIPGAPPT----SAAGFFNPGL-TPPAVATPPLAAPSAGPPPSLPPAA 686
>gi|299065199|emb|CBJ36365.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 787
Score = 39.3 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 30/133 (22%), Gaps = 6/133 (4%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
+ A G + AP L P P ++ + ++
Sbjct: 574 TPATPGGPGNPQAHGAPASPAPQALMTPAAPGTTARPGQQQPGAMPMPEHRGEARPGPDA 633
Query: 107 QNDIS------GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
+P + + + P E R + ++ + P
Sbjct: 634 PAQAVHVPPQGPAGTTTRPPQPSGMPGTPRDERRPMPSAQQEHPRNEPPAQARPEPQPHP 693
Query: 161 DKNFCSNASGARI 173
ARI
Sbjct: 694 APVPVPRQPEARI 706
>gi|271967623|ref|YP_003341819.1| serine/threonine protein kinase-like protein [Streptosporangium
roseum DSM 43021]
gi|270510798|gb|ACZ89076.1| Serine/threonine protein kinase-like protein [Streptosporangium
roseum DSM 43021]
Length = 599
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 16/172 (9%)
Query: 15 KRKSFYSQIISRLGLFLLFCTFIVGLSIYIL-----------ISHAFVGTISEMIPYSVI 63
++K+ + G L + G + L ++ A +E ++
Sbjct: 321 RQKTRRPVGLLLAGTAAL--VVVGGGTAVALQGGEKAAAVRPVASAPASQEAEESDPALT 378
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ P P + + + TV + Q GQ G + +P
Sbjct: 379 PDDPPSAWESPKPRKSPSPSVRVTSETVSQPTVRPADQPTGQPTKKAGGDSGDGEPEPDE 438
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
P++ E GL AK + T P K + + I
Sbjct: 439 KTSEPPSVIEPTDAGLPSPT--AKPTATAKPTAKP-TAKPTSKPSPTGKQTI 487
>gi|269124454|ref|YP_003297824.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
gi|268309412|gb|ACY95786.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
Length = 774
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 7/122 (5%)
Query: 52 GTISEMIP-YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
G E +P AP P +PS+ + +S +
Sbjct: 22 GLAPEPVPAQPTAVSGAPGGQPAPPTRPSVPAPSQPSGASGATGSGRTASGRSAR----- 76
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+G T +R + + +E + + +N E+ ++D +
Sbjct: 77 TGGTASTGSSRRGMLGAG-LVEVPPVPYRDPATAIMRNPEVPENRRFCSVDGEPVGRSRD 135
Query: 171 AR 172
R
Sbjct: 136 GR 137
>gi|323305784|gb|EGA59523.1| Sec31p [Saccharomyces cerevisiae FostersB]
Length = 1273
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P R P+ +P K S P T N + S V
Sbjct: 1041 APPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVF 1100
Query: 117 NKPTRSTSI-------DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
NKP + L +IE+ G + L+ + + ++ P + ++A
Sbjct: 1101 NKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSA 1159
>gi|189181718|ref|NP_001099432.2| proteoglycan 4 [Rattus norvegicus]
Length = 1060
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 5/111 (4%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKR--DNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
+E AP + +P+ T + + + + +P
Sbjct: 370 KEPAPTTKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTPKEPA-LTTPKEPAPTPKEPEP 428
Query: 122 STSIDSLPTIEERLILGLSKKELL--AKNKVGREDTEVPAMDKNFCSNASG 170
+T + PT + K+ K ++ VP K
Sbjct: 429 TTPKEPAPTTRKEPAPTTPKEPAPTTKKPELTIPKEPVPTTPKEPAPTTPK 479
>gi|299749705|ref|XP_001836279.2| hypothetical protein CC1G_06364 [Coprinopsis cinerea okayama7#130]
gi|298408561|gb|EAU85463.2| hypothetical protein CC1G_06364 [Coprinopsis cinerea okayama7#130]
Length = 1495
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 47/184 (25%), Gaps = 18/184 (9%)
Query: 9 LRKKTPKRKSFYSQ-IISRLGLF------LLFCTFIVGLSIYILISHAFVGTISEMIPYS 61
L+ +R + G+ + T + ++ + S +
Sbjct: 1113 LQNPPARRTQKPANAATPTAGISSPSPAPMTASTPTHSAATPSAVTGSPQLPKSPKVKIP 1172
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG-------KT 114
++ A P +K + S + S + S +
Sbjct: 1173 ATKKPAGQTRRRPSTSTNKGATSSPSVPNAPTPQSHASPETASTPTQSSSSKRPRDDEGS 1232
Query: 115 VVNKPTRSTSIDSL----PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
VN P+ S DS P+ +R+ + + P +K
Sbjct: 1233 NVNGPSPGPSGDSEVANGPSPPKRVKRDEMTPSASSSTSSTQATVPQPPPEKPIEPAKKA 1292
Query: 171 ARIA 174
+A
Sbjct: 1293 PEVA 1296
>gi|189190036|ref|XP_001931357.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972963|gb|EDU40462.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1760
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 20/197 (10%)
Query: 59 PYSVIREIAPIPLTIPLNIED-KQSPSKRDNNTVCNQLKN-DSSQHDGQIQNDISGKTVV 116
P P P + E +PS + V + ++ S+ Q S T
Sbjct: 87 PLPTAHAPKAHPFVSPQSPEAATGAPSSQSPLRVAHGVRQSASAVTPSQPYQHHSPNTPA 146
Query: 117 -----------NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
++P +S + LP I L + + + G +
Sbjct: 147 PLPLHHANLHPHQPPQSPNNTELPPISTALYSRDTSRYYDPTSDNGDRGLARDPARYDPQ 206
Query: 166 SNASGARIAIVVSGLGI--SQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223
A AR S+ + + +T ++A + + G EA
Sbjct: 207 YPAQQAR-----DPHAYPDSRPAHSPYDKVYQSPVTTSYAHHSPLQRPISQHQHTGGMEA 261
Query: 224 ILQIPMQAFDESYNEDD 240
+ P+
Sbjct: 262 MSHSPVSPSVYQSMNRG 278
>gi|146317928|ref|YP_001197640.1| translation initiation factor 2 GTPase [Streptococcus suis 05ZYH33]
gi|146320114|ref|YP_001199825.1| translation initiation factor 2 GTPase [Streptococcus suis 98HAH33]
gi|145688734|gb|ABP89240.1| Translation initiation factor 2 (IF-2; GTPase) [Streptococcus suis
05ZYH33]
gi|145690920|gb|ABP91425.1| Translation initiation factor 2 (IF-2; GTPase) [Streptococcus suis
98HAH33]
Length = 698
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 31/125 (24%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ 107
A S AP + + +P D + S + Q +
Sbjct: 363 QAPSAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQVPSIPEEQPK 422
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ + + T T EE + + + ++T P + K
Sbjct: 423 ETPAPEEPKKEDTPQTPQAPSTPKEEAPKEEVPTPPAPSVPEEQPKETPTPEVPKQEDVQ 482
Query: 168 ASGAR 172
+
Sbjct: 483 PEAPK 487
>gi|12697897|dbj|BAB21767.1| KIAA1676 protein [Homo sapiens]
Length = 735
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 32/116 (27%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 434 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 493
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
S L + + + ++ G + P + S + +
Sbjct: 494 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ 549
>gi|256270061|gb|EEU05306.1| Sec31p [Saccharomyces cerevisiae JAY291]
Length = 1273
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P R P+ +P K S P T N + S V
Sbjct: 1041 APPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVF 1100
Query: 117 NKPTRSTSI-------DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
NKP + L +IE+ G + L+ + + ++ P + ++A
Sbjct: 1101 NKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSA 1159
>gi|224072967|ref|XP_002190687.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 828
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 38/135 (28%), Gaps = 11/135 (8%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDK--QSPSKRDNNTVCNQLKNDSSQHDG 104
S F+ ++ E+ S ++ P P Q+P K D ++ +
Sbjct: 59 SFDFIESLEELGTPSAMQRACPRPGMPEPTPGPPGRQAPPKPDPSSGRAPAPRSEPKRRA 118
Query: 105 QIQND--------ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE 156
+ ++ TV P + + + A + E
Sbjct: 119 RSKSAPRVKSTLTPVPITVAASPPPARRGREVLRVAREPSHTDPSPRREAPMPLRALANE 178
Query: 157 V-PAMDKNFCSNASG 170
V P + S+ S
Sbjct: 179 VHPIKLQPQRSSVSR 193
>gi|190405189|gb|EDV08456.1| COPII coat of secretory pathway vesicles component [Saccharomyces
cerevisiae RM11-1a]
gi|207347126|gb|EDZ73413.1| YDL195Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259145049|emb|CAY78313.1| Sec31p [Saccharomyces cerevisiae EC1118]
gi|323349392|gb|EGA83616.1| Sec31p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1273
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P R P+ +P K S P T N + S V
Sbjct: 1041 APPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVF 1100
Query: 117 NKPTRSTSI-------DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
NKP + L +IE+ G + L+ + + ++ P + ++A
Sbjct: 1101 NKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSA 1159
>gi|557058|gb|AAA50367.1| Web1p [Saccharomyces cerevisiae]
Length = 1273
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P R P+ +P K S P T N + S V
Sbjct: 1041 APPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVF 1100
Query: 117 NKPTRSTSI-------DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
NKP + L +IE+ G + L+ + + ++ P + ++A
Sbjct: 1101 NKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSA 1159
>gi|85715479|ref|ZP_01046460.1| hypothetical protein NB311A_17279 [Nitrobacter sp. Nb-311A]
gi|85697674|gb|EAQ35550.1| hypothetical protein NB311A_17279 [Nitrobacter sp. Nb-311A]
Length = 448
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 45/172 (26%), Gaps = 6/172 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ T S P + +P +P ++ +
Sbjct: 186 PLLTTSRPEPAPAEVRASDASGAMPPVQVSSIAPKLPVTGESITVTPQ-TAAEPVKADAG 244
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ V + + + + E + +
Sbjct: 245 KARDAEVTVTAAVKAGGDTTASSPAGTQTMPDDQAQSPPARAEEAGPM-----AIPALKR 299
Query: 170 GARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
ARIA+ VSG Q + +L A IT+A + + EA K G+
Sbjct: 300 SARIAVFVSGKDNKIYVRQNFLPILDAPITIAASDRPLGTHVFTAEAVKGGK 351
>gi|225181397|ref|ZP_03734841.1| polysaccharide deacetylase [Dethiobacter alkaliphilus AHT 1]
gi|225167978|gb|EEG76785.1| polysaccharide deacetylase [Dethiobacter alkaliphilus AHT 1]
Length = 338
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 350 TTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
G I + +++ + + + + Q R + V L+ L S P
Sbjct: 288 QNGSLILM-HPTEQTADFLREVIPQLRSRGLEPVTLAELLSPSRP 331
>gi|116198143|ref|XP_001224883.1| hypothetical protein CHGG_07227 [Chaetomium globosum CBS 148.51]
gi|88178506|gb|EAQ85974.1| hypothetical protein CHGG_07227 [Chaetomium globosum CBS 148.51]
Length = 2174
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 47/167 (28%), Gaps = 18/167 (10%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
SE P P +T P P + + + IS ++
Sbjct: 1699 SERRPPPTSFRTQPRRITTPRPQSITARPGLARPGLARPGPPSARPESVSTRRESISAES 1758
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
++++P + I R ++ E ++ T + + A
Sbjct: 1759 ILSRP--GSITSPPEPISPRPDPISARPEPISARPRSI-STRRQSTSRPESFAAQ----- 1810
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
SQ+ + +I+ P +I+ + A+ +
Sbjct: 1811 --------SQSNSAESISTRPGSISA--LPEPTPAEPVSNRARSTSR 1847
>gi|296086551|emb|CBI32140.3| unnamed protein product [Vitis vinifera]
Length = 828
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 12/113 (10%)
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
+R AP+P P + + P
Sbjct: 15 ALRPYAPVPNGYPAIPAPGPQGAVPPPGVPRYPSPYATMVRPAFP------------PRP 62
Query: 122 STSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+I LP + + G+ + V V A + + +IA
Sbjct: 63 PGAIGMLPALSRPPVPGMPGVRPIMPPVVRPAIVPVAAPTEKPQTTVYVGKIA 115
>gi|330443497|ref|NP_010086.2| Sec31p [Saccharomyces cerevisiae S288c]
gi|329138868|tpg|DAA11668.2| TPA: Sec31p [Saccharomyces cerevisiae S288c]
Length = 1273
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P R P+ +P K S P T N + S V
Sbjct: 1041 APPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVF 1100
Query: 117 NKPTRSTSI-------DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
NKP + L +IE+ G + L+ + + ++ P + ++A
Sbjct: 1101 NKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSA 1159
>gi|126735327|ref|ZP_01751073.1| hypothetical protein RCCS2_15659 [Roseobacter sp. CCS2]
gi|126715882|gb|EBA12747.1| hypothetical protein RCCS2_15659 [Roseobacter sp. CCS2]
Length = 881
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 14/153 (9%)
Query: 10 RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPI 69
RK P+ ++ I GL I+ A + +P +E A +
Sbjct: 341 RKPAPRSTKNTNKPALIAASIAAGVLLIGGL-IWSQQDTA----ETAAVPVPTTQETATV 395
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDS----SQHDGQIQN-----DISGKTVVNKPT 120
P +P+ N Q + + +V +P
Sbjct: 396 TPQAPAPTVAASTPTPETVLEAAPITPNVEVAGFGAAGDQPSDLPELTAETAAPIVLQPA 455
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGRE 153
++ + + P +E + A+ VG
Sbjct: 456 QTVAQAADPAMEPMQNPPAPQSPETAQASVGAP 488
>gi|1722838|sp|P38968|SEC31_YEAST RecName: Full=Protein transport protein SEC31; AltName: Full=Protein
WEB1
gi|1004300|emb|CAA58252.1| D1229 [Saccharomyces cerevisiae]
gi|1431320|emb|CAA98772.1| SEC31 [Saccharomyces cerevisiae]
Length = 1273
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 8/119 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS-PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P R P+ +P K S P T N + S V
Sbjct: 1041 APPPQQRVATPLSGGVPPAPLPKASNPYAPTATTQPNGSSYPPTGPYTNNHTMTSPPPVF 1100
Query: 117 NKPTRSTSI-------DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
NKP + L +IE+ G + L+ + + ++ P + ++A
Sbjct: 1101 NKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPSQPPTLASQVNTSA 1159
>gi|253751156|ref|YP_003024297.1| surface-anchored protein [Streptococcus suis SC84]
gi|251815445|emb|CAZ51020.1| putative surface-anchored protein [Streptococcus suis SC84]
Length = 684
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 31/125 (24%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ 107
A S AP + + +P D + S + Q +
Sbjct: 349 QAPSAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQVPSIPEEQPK 408
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ + + T T EE + + + ++T P + K
Sbjct: 409 ETPAPEEPKKEDTPQTPQAPSTPKEEAPKEEVPTPPAPSVPEEQPKETPTPEVPKQEDVQ 468
Query: 168 ASGAR 172
+
Sbjct: 469 PEAPK 473
>gi|256773243|ref|NP_898961.2| methylcytosine dioxygenase TET3 [Mus musculus]
gi|239938841|sp|Q8BG87|TET3_MOUSE RecName: Full=Methylcytosine dioxygenase TET3
Length = 1668
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 44/173 (25%), Gaps = 14/173 (8%)
Query: 3 IDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
+ P++ K + + + + L GL A + +P
Sbjct: 465 TSVRKPIQIKKSRSRDMQPLFLPVRQIVLE------GLKPQASEGQAPLPAQLS-VPPPA 517
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
+ A PL E + + + + SG T P
Sbjct: 518 SQGAASQSCATPLTPEPSLALFAPSPSGDSLLPPTQEMRSPSPMVALQSGST--GGPLPP 575
Query: 123 TSIDSLPTI-----EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
I E GL + + + T +PA + F + +
Sbjct: 576 ADDKLEELIRQFEAEFGDSFGLPGPPSVPIQEPENQSTCLPAPESPFATRSPK 628
>gi|148666664|gb|EDK99080.1| mCG133587 [Mus musculus]
Length = 1707
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 44/173 (25%), Gaps = 14/173 (8%)
Query: 3 IDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSV 62
+ P++ K + + + + L GL A + +P
Sbjct: 504 TSVRKPIQIKKSRSRDMQPLFLPVRQIVLE------GLKPQASEGQAPLPAQLS-VPPPA 556
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
+ A PL E + + + + SG T P
Sbjct: 557 SQGAASQSCATPLTPEPSLALFAPSPSGDSLLPPTQEMRSPSPMVALQSGST--GGPLPP 614
Query: 123 TSIDSLPTI-----EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
I E GL + + + T +PA + F + +
Sbjct: 615 ADDKLEELIRQFEAEFGDSFGLPGPPSVPIQEPENQSTCLPAPESPFATRSPK 667
>gi|331239854|ref|XP_003332579.1| hypothetical protein PGTG_12607 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311569|gb|EFP88160.1| hypothetical protein PGTG_12607 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 714
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 13/153 (8%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P+ R+ + + G+ L ++ A +G S + E
Sbjct: 397 APVTPPMAARRPAWKATVPSAGVEAEDMDVEAELFVHT---PAELGADSSAEEPPSLAEP 453
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P+P ++P P R + N +I + S+
Sbjct: 454 EPVPASLPPK-STSAPPKVRFERGITKDHPNAVDGVLKKISDLTVPGL---------SVS 503
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
L I + G+ K + +VG E+ +V +
Sbjct: 504 ELLAISPSVAEGMKKWVSRRRVEVGPEELKVSS 536
>gi|223996221|ref|XP_002287784.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976900|gb|EED95227.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 734
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 48/187 (25%), Gaps = 34/187 (18%)
Query: 3 IDLNHPLR--------KKTPKRKSFYSQI---ISRLGLFLLFCTFIVGLSIYILISHAFV 51
IDL P + + + R R + L+ I L + A
Sbjct: 15 IDLQMPTQTRQRRLDHRASQYRPGNTKASSKRRPRRHILLIGALAIGSLPSFASAQSA-- 72
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC--NQLKNDSSQHDGQIQND 109
I + +P+ + P+ + + + +
Sbjct: 73 ----SPISTIDVTSPSPVDTLTEASFPPNLKPTSEPTTIAPTISHMPSAIPSYPPTFY-- 126
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
T+ ++P+ S ++ + P+ +K P+ + S
Sbjct: 127 ---PTISHRPSASPTVSAAPSF----------PPSTSKPSYAPLPLPTPSPVIPPSAAPS 173
Query: 170 GARIAIV 176
I+
Sbjct: 174 LNTTTII 180
>gi|158286287|ref|XP_308658.4| AGAP007100-PA [Anopheles gambiae str. PEST]
gi|157020396|gb|EAA04001.5| AGAP007100-PA [Anopheles gambiae str. PEST]
Length = 1504
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 36/176 (20%), Gaps = 16/176 (9%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
M +D +P+ + P S Y SR Y G
Sbjct: 587 MPMDSRYPMDRYPPS-DSRYPSPDSRYPADAR----------YPPTQPDAGGRYPPGPAP 635
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNT-----VCNQLKNDSSQHDGQIQNDISGKTV 115
R P P + P + ++ + Q+ + V
Sbjct: 636 ESGRYPPPESGRYPPPDSGRYPPPVQRPDSRYPVMAPPATRYPPPQYMPHMYGSAVYPVV 695
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
++ + P + V A + S
Sbjct: 696 PSRAPPNRGYGPDPYPAPPGARPIENNRYPPAPDARYPLEPVGAQGRYPTSPNVSP 751
>gi|299747915|ref|XP_002911234.1| calcineurin temperature suppressor Cts1 [Coprinopsis cinerea
okayama7#130]
gi|298407733|gb|EFI27740.1| calcineurin temperature suppressor Cts1 [Coprinopsis cinerea
okayama7#130]
Length = 625
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 44/172 (25%), Gaps = 13/172 (7%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVI 63
D N P + P R +S S G L S ++ + + P V
Sbjct: 303 DPNAPAQYPPPARGPRHSVPASSSGFVPLPQP-----SGFVPLQP----QTGDPYPPPVS 353
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
AP+ + P + N N Q T T
Sbjct: 354 HTPAPLQYPPAPSQFATPYPQTA-SPVSYNAAPNPPPGSYQQPVPATQPYTAYATYPFPT 412
Query: 124 SIDSL---PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
S T E + + + + G E PA + G+R
Sbjct: 413 SGQPSQQYQTSEYTQTVPSPAQSQVYQPYPGPPPHESPASLPQPPATVGGSR 464
>gi|296809211|ref|XP_002844944.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Arthroderma otae CBS 113480]
gi|238844427|gb|EEQ34089.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Arthroderma otae CBS 113480]
Length = 1660
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 38/142 (26%), Gaps = 22/142 (15%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS------- 100
H G + +P+ T+P + SP+ +N L
Sbjct: 51 HTPPGFPTVSRSPHYTHPTSPMNTTLPPLNGAEPSPAYHGSNQSGYSLPRPYGSSLMSNP 110
Query: 101 ----------QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV 150
+ G V+ P R I +++ R + +
Sbjct: 111 AHSPSPGMFNHTPSHTRPGSIGDGVLRSPKREPDI----SLDSRPVFSSQPPVRETRATT 166
Query: 151 GREDTEVPAMD-KNFCSNASGA 171
+E A D +F S SG
Sbjct: 167 PKEPKPARATDPMSFASILSGP 188
>gi|27372855|dbj|BAC53753.1| SRECRP-1 [Homo sapiens]
Length = 866
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 14/136 (10%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND---S 99
+I H+ P E AP P + K++PS + +TV + +
Sbjct: 667 WIHGKHSAAAAGRAPSPPPPGSEAAPSPS------KRKRTPSDKSAHTVEHGSPRTRDPT 720
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK--VGREDTEV 157
+ G + P R+ + P + E G + +
Sbjct: 721 PRPPGLPEEAT--ALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKT 778
Query: 158 PAMDKNFCS-NASGAR 172
++ + + A G R
Sbjct: 779 RSLGRAEVALGAQGPR 794
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 31/144 (21%), Gaps = 12/144 (8%)
Query: 41 SIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS 100
S + + + P + E + P + T +
Sbjct: 705 SAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAP 764
Query: 101 QHDGQIQNDISGKT-------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--- 150
+ + ++ GKT V + P +R + S +
Sbjct: 765 EAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGP 824
Query: 151 --GREDTEVPAMDKNFCSNASGAR 172
D P + R
Sbjct: 825 EKAATDLPAPETPRKKTPIQKPPR 848
>gi|307149662|ref|YP_003891032.1| integrase family protein [Cyanothece sp. PCC 7822]
gi|306986791|gb|ADN18667.1| integrase family protein [Cyanothece sp. PCC 7822]
Length = 325
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 320 PYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRD 379
P A + ++ + L+ GQ G+A + ++
Sbjct: 229 PLNKARRIIPRRMSEQAVMSALQ-------KRGQQAGIASFSPHDLRR--TFISDLLDAG 279
Query: 380 VSVVPLSCLAKLSSPSS 396
V +V +S LA +SPS+
Sbjct: 280 VDLVTVSQLAGHASPST 296
>gi|295696176|ref|YP_003589414.1| polysaccharide deacetylase [Bacillus tusciae DSM 2912]
gi|295411778|gb|ADG06270.1| polysaccharide deacetylase [Bacillus tusciae DSM 2912]
Length = 318
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 354 AIGVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSSP 394
A+ + + + +Q + +V +S L P
Sbjct: 277 ALVLMHPTPGTPAALEGIIQGLRGKGYDLVTVSNLLSPQRP 317
>gi|259490902|gb|ABG29606.2| circumsporozoite protein [Plasmodium knowlesi]
gi|259490904|gb|ABG29608.2| circumsporozoite protein [Plasmodium knowlesi]
Length = 345
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 22/124 (17%), Gaps = 6/124 (4%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
+ P + AP P + P + Q
Sbjct: 97 RPGGEQPAPGPGGEQPAPGPGGE----QPAPGPGGEQPAPGPGGEQPAPGPGGEQPAPGP 152
Query: 111 SGKTVVNKP--TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
G+ P + R + R E PA A
Sbjct: 153 GGEQPAPGPGGEQPAPGPGGEQPAPRPGGEQPAPGPGGEQPAPRPGGEQPAPGPGGEQPA 212
Query: 169 SGAR 172
R
Sbjct: 213 PAPR 216
>gi|119623371|gb|EAX02966.1| scavenger receptor class F, member 2, isoform CRA_b [Homo sapiens]
Length = 871
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 14/136 (10%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND---S 99
+I H+ P E AP P + K++PS + +TV + +
Sbjct: 672 WIHGKHSAAAAGRAPSPPPPGSEAAPSPS------KRKRTPSDKSAHTVEHGSPRTRDPT 725
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK--VGREDTEV 157
+ G + P R+ + P + E G + +
Sbjct: 726 PRPPGLPEEAT--ALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKT 783
Query: 158 PAMDKNFCS-NASGAR 172
++ + + A G R
Sbjct: 784 RSLGRAEVALGAQGPR 799
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 31/144 (21%), Gaps = 12/144 (8%)
Query: 41 SIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS 100
S + + + P + E + P + T +
Sbjct: 710 SAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAP 769
Query: 101 QHDGQIQNDISGKT-------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--- 150
+ + ++ GKT V + P +R + S +
Sbjct: 770 EAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGP 829
Query: 151 --GREDTEVPAMDKNFCSNASGAR 172
D P + R
Sbjct: 830 EKAATDLPAPETPRKKTPIQKPPR 853
>gi|327288766|ref|XP_003229096.1| PREDICTED: lysine-specific demethylase 6B-like, partial [Anolis
carolinensis]
Length = 1396
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQ--SPSKRDN--NTVCNQLKNDSSQHD--- 103
+++ PY + P P + P+ R + C N S D
Sbjct: 90 RNSVAHPFPYPSPAYGSHPPPHRPSAMAPSPRTPPAHRPPLESHGCLARPNGSDLRDSRV 149
Query: 104 --GQIQNDISGKTVVNKP-TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
+ + + TV P + P + G + L G + + PA+
Sbjct: 150 PRARPDSTATPATVACVPYAPRPTPGGPPATSKTTSRGQPPLDSL-----GSDHYQTPAL 204
Query: 161 DKNFCSNASGAR 172
D++ + SG R
Sbjct: 205 DQSCPAQESGGR 216
>gi|325829807|ref|ZP_08163265.1| hypothetical protein HMPREF9404_3543 [Eggerthella sp. HGA1]
gi|325487974|gb|EGC90411.1| hypothetical protein HMPREF9404_3543 [Eggerthella sp. HGA1]
Length = 549
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 31/142 (21%), Gaps = 12/142 (8%)
Query: 42 IYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR------------DNN 89
L+ E P + P P +PS +
Sbjct: 320 CLSLLPEKPTVPPVEEEPPAADSPAVPPVGNTPPEEGSGDAPSSETKPPESVLPPEVNPP 379
Query: 90 TVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK 149
+ ND +G+ ++ + + PT +
Sbjct: 380 AAPEGNPPSAPNEPAPPANDGAGQADPDETPKPDGDSAAPTPPASPSNPENTTPPAGSET 439
Query: 150 VGREDTEVPAMDKNFCSNASGA 171
E+T+ P S +
Sbjct: 440 TPPEETKPPESTTPPESPETTP 461
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 30/112 (26%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+E P + P P D +P+ + + + +
Sbjct: 386 PPSAPNEPAPPANDGAGQADPDETPKPDGDSAAPTPPASPSNPENTTPPAGSETTPPEET 445
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
++ + T+ S + + SK L +E +P D
Sbjct: 446 KPPESTTPPESPETTPGSGLQEPTKEVANSSKPSLEEPTAPAQEPVNLPKAD 497
>gi|237745819|ref|ZP_04576299.1| FtsK/SpoIIIE family DNA segregation ATPase [Oxalobacter formigenes
HOxBLS]
gi|229377170|gb|EEO27261.1| FtsK/SpoIIIE family DNA segregation ATPase [Oxalobacter formigenes
HOxBLS]
Length = 789
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 72/290 (24%), Gaps = 70/290 (24%)
Query: 134 RLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINL 193
R + G + + A+ K + +I I++ + +
Sbjct: 532 RNLAGYNNRIADAEKKEEKIPNPFSITPDAPEPLERMPQIVIIIDEFADLMMVVGKKVEE 591
Query: 194 LPANITLAFASNGNSLDRWMKEAKKKGQEAIL----------------QIPMQAFDESYN 237
L + R ++A+ G IL IP + + +
Sbjct: 592 L--------------IARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSS 637
Query: 238 EDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGL 297
+ DS T+ + LL + G+ N +S+ E + + G
Sbjct: 638 KIDSRTILDQMGAETLLG--LGDMLYLPPGTGLPNRVHGAFVSDDE-VHRVVSFLKEHGK 694
Query: 298 L-FFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQA-- 354
+ D L A D + D I +A
Sbjct: 695 ADYIDGILEGGTLEDDAAGLSGEQTA------DGESDALY-----DEAVAIVLKNRRASI 743
Query: 355 ------IGVAVAFDESIEVISQWLQQEHVRDVS-----------VVPLSC 387
+ + ++ L+Q + +VP S
Sbjct: 744 SLVQRHLRIG------YNRAARLLEQMEKSGLVSPMQSNGNREILVPASA 787
>gi|254777081|ref|ZP_05218597.1| hypothetical protein MaviaA2_20779 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 838
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 28/118 (23%), Gaps = 2/118 (1%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQ--SPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
+ P + + AP P PL + P+ +
Sbjct: 469 GKPGPVAPSGKPAPGPADGPLPHSPTESKPPAGGTPPAAEPPKPTAAPHSGEPKPIATPP 528
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
++V T + D P GL + A +P SG
Sbjct: 529 ESVGKPVTPPPAGDGEPPAVPAAAAGLPVESTAAAATHLPTPPSLPMGGGAPPEAPSG 586
>gi|47606791|sp|Q96GP6|SREC2_HUMAN RecName: Full=Scavenger receptor class F member 2; AltName:
Full=SRECRP-1; AltName: Full=Scavenger receptor
expressed by endothelial cells 2 protein; Short=SREC-II;
Flags: Precursor
gi|62148922|dbj|BAD93345.1| NSR1 [Homo sapiens]
gi|119623370|gb|EAX02965.1| scavenger receptor class F, member 2, isoform CRA_a [Homo sapiens]
Length = 866
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 14/136 (10%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND---S 99
+I H+ P E AP P + K++PS + +TV + +
Sbjct: 667 WIHGKHSAAAAGRAPSPPPPGSEAAPSPS------KRKRTPSDKSAHTVEHGSPRTRDPT 720
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK--VGREDTEV 157
+ G + P R+ + P + E G + +
Sbjct: 721 PRPPGLPEEAT--ALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKT 778
Query: 158 PAMDKNFCS-NASGAR 172
++ + + A G R
Sbjct: 779 RSLGRAEVALGAQGPR 794
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 31/144 (21%), Gaps = 12/144 (8%)
Query: 41 SIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS 100
S + + + P + E + P + T +
Sbjct: 705 SAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAP 764
Query: 101 QHDGQIQNDISGKT-------VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--- 150
+ + ++ GKT V + P +R + S +
Sbjct: 765 EAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGP 824
Query: 151 --GREDTEVPAMDKNFCSNASGAR 172
D P + R
Sbjct: 825 EKAATDLPAPETPRKKTPIQKPPR 848
>gi|73988016|ref|XP_542327.2| PREDICTED: similar to inositol polyphosphate phosphatase-like 1
isoform 1 [Canis familiaris]
Length = 1264
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 9/129 (6%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
S A + P S R+ AP + PL+ + + P K +S+
Sbjct: 906 SKAPSVSRGSQDPRSGNRKPAPAEASCPLS-KLFEEPEKPPPTGRPPAPPRAASR----- 959
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ ++ + + + P + +L E P+ +
Sbjct: 960 EEPLTPRLKAEGAPEPEGVAAPPP---KNSFNNPAYYVLEGVPHQLLPPEPPSPARAPVP 1016
Query: 167 NASGARIAI 175
A+ ++AI
Sbjct: 1017 PATKNKVAI 1025
>gi|317490024|ref|ZP_07948515.1| hypothetical protein HMPREF1023_02215 [Eggerthella sp. 1_3_56FAA]
gi|316910865|gb|EFV32483.1| hypothetical protein HMPREF1023_02215 [Eggerthella sp. 1_3_56FAA]
Length = 549
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 30/112 (26%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+E P + P P D +P+ + + + +
Sbjct: 386 PPSAPNEPAPPANDGAGQADPDETPKPDGDSAAPTPPASPSNPENTTPPAGSETTPPEET 445
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
++ + T+ S + + SK L +E +P D
Sbjct: 446 KPPESTTPPESPETTPGSGLQEPTKEVANSSKPSLEEPTAPAQEPVNLPKAD 497
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 31/142 (21%), Gaps = 12/142 (8%)
Query: 42 IYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR------------DNN 89
L+ E P + P P +PS +
Sbjct: 320 CLSLLPEKPTVPPVEEEPPAADSPAVPPVGNTPPEEGSGDAPSGETKPPESVLPPEVNPP 379
Query: 90 TVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK 149
+ ND +G+ ++ + + PT +
Sbjct: 380 AAPEGNPPSAPNEPAPPANDGAGQADPDETPKPDGDSAAPTPPASPSNPENTTPPAGSET 439
Query: 150 VGREDTEVPAMDKNFCSNASGA 171
E+T+ P S +
Sbjct: 440 TPPEETKPPESTTPPESPETTP 461
>gi|297171117|gb|ADI22128.1| serine/threonine protein kinase [uncultured myxobacterium
HF0200_19H16]
Length = 651
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 30/117 (25%), Gaps = 7/117 (5%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
H L+ + R S+ S + G+ + L+ E P +
Sbjct: 401 HSLQNEAQSRHPKGSENNSSFIGVAVVLLIFAGVGGFFLLKQ-------EPTPQPAQKTT 453
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
A P E K + + D + + P+ +T
Sbjct: 454 AAKVPPKPPTNETPTPAKKPAPEKATQAVAPTPATPSPAPLEDSVDVVLTSSPSGAT 510
>gi|317031610|ref|XP_001393891.2| PHD transcription factor (Rum1) [Aspergillus niger CBS 513.88]
Length = 1701
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 5/120 (4%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ S + AP P + K+ + + T + + + SG T
Sbjct: 267 LDSATPSATPQPAPSNPVAPPS-AAKEVEATPEKPTPPVEPARPIASGFTPVNAGSSGFT 325
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAK----NKVGREDTEVPAMDKNFCSNASG 170
VN+ +++S P ++ G + +A+ VP M + ++
Sbjct: 326 AVNRSPSFVAVNSGPAVKREADNGSLTPKSVAEHPANPSAASNGHAVPPMKRAISHESAS 385
>gi|260796867|ref|XP_002593426.1| hypothetical protein BRAFLDRAFT_70794 [Branchiostoma floridae]
gi|229278650|gb|EEN49437.1| hypothetical protein BRAFLDRAFT_70794 [Branchiostoma floridae]
Length = 2545
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/118 (11%), Positives = 30/118 (25%), Gaps = 9/118 (7%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+++ P +++ + P +E K++P V ++ S
Sbjct: 683 PPSPVAKTTPPIAVKKTPSPEVKAPPPVEVKRTP--PPVQKVSPPVEKASP-----PMEV 735
Query: 110 ISGKTVVNKPTRSTSIDSLPTIE--ERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ V + P +E + K E P +
Sbjct: 736 QKPSSSVKSVPPPAKVQQPPPVEVQRAPSPVQKVSPPVEKASPPVEVQRAPPPVQKAS 793
>gi|322712163|gb|EFZ03736.1| hypothetical protein MAA_00810 [Metarhizium anisopliae ARSEF 23]
Length = 782
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 50 FVGTISEMIPYSVI-REIAPIPLTIPLNIEDKQSPSKR-----DNNTVCNQLKNDSSQHD 103
GT P + I + AP+P P + S N + N
Sbjct: 30 PAGTPPPGHPPAQIPQHQAPLPGQTPPIGAASSTTSLPMNHPGAGNRPPSYTANYPPAGP 89
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLA 146
G + + G N+ S + P I +G + A
Sbjct: 90 GDRTSPLQGS---NRTPPSQMVGGPPPINTGAPVGYPPPNMAA 129
>gi|194376264|dbj|BAG62891.1| unnamed protein product [Homo sapiens]
Length = 552
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 31/123 (25%), Gaps = 1/123 (0%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQ 105
+ T + + +E AP + +P+ + ++ +
Sbjct: 401 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 460
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ +P +T + PT ++ K+ K T
Sbjct: 461 PTTPKEPASTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK 520
Query: 166 SNA 168
A
Sbjct: 521 EPA 523
>gi|283784297|ref|YP_003364162.1| DNA polymerase III subunits gamma and tau [Citrobacter rodentium
ICC168]
gi|282947751|emb|CBG87307.1| DNA polymerase III subunits gamma and tau [Citrobacter rodentium
ICC168]
Length = 643
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 32/123 (26%), Gaps = 1/123 (0%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E P +AP + P + + +P+ +
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMNPTQVPQQSAPAPQQTPAAPLPDATSQVLAARSQLQ 420
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
G T K + + + P L S E + + PA + + A
Sbjct: 421 RAQGATKAKKSEPAAATRARPVNNAALERLASVTERVQARPAPSALEQAPAKKEAYRWKA 480
Query: 169 SGA 171
+
Sbjct: 481 TTP 483
>gi|50551361|ref|XP_503154.1| YALI0D22506p [Yarrowia lipolytica]
gi|49649022|emb|CAG81352.1| YALI0D22506p [Yarrowia lipolytica]
Length = 1489
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 59/191 (30%), Gaps = 27/191 (14%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-TVVNKP 119
+ + AP+ P+N + + T Q + + TVV
Sbjct: 750 AATEKAAPVTAASPVNTGSPVTAASPAKATAHTATPQ---VKTSQTEPTATPAATVVPAV 806
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
T SL T + + N T+ PA A + I +
Sbjct: 807 TSPVEASSLATQLAASADSAPTQPPSSANPFS-TPTKSPAK----------AMVVINLDD 855
Query: 180 LGISQ------TGTQRAINLL--PANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQA 231
G ++ T+ A + + P A +G+ L ++ K+ + L +P
Sbjct: 856 -GDNEDDVVVVASTRSASSAIAAPGPSHSNTAPDGSDLA--AQQTAKRRHSSSL-LPNVP 911
Query: 232 FDESYNEDDSY 242
F S + D Y
Sbjct: 912 FRYSRDPDPPY 922
>gi|332218204|ref|XP_003258249.1| PREDICTED: LOW QUALITY PROTEIN: methylcytosine dioxygenase TET1-like
[Nomascus leucogenys]
Length = 2136
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 28/98 (28%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 1835 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 1894
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED 154
S L +++ + ++ G +
Sbjct: 1895 AADGPGISQLGEVAPLPTLSAPVTEPLVNSEPPTGVTE 1932
>gi|260841258|ref|XP_002613845.1| hypothetical protein BRAFLDRAFT_72033 [Branchiostoma floridae]
gi|229299235|gb|EEN69854.1| hypothetical protein BRAFLDRAFT_72033 [Branchiostoma floridae]
Length = 717
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 25/115 (21%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
+ S AP P + P P + N+ + + S +
Sbjct: 455 VQPSTTDPPAPKPKSTPPVQPSATYPRTTNPNSTPHVQPSTSDPPATNPNASSPEQPSTT 514
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P + + P +A+ R
Sbjct: 515 DPLTPNPKSTPPVQPSTSDPPATNFTYTVQPSTTDPPAPKPKSTPPVQPSATYPR 569
>gi|261491698|ref|ZP_05988279.1| hypothetical protein COK_0132 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494461|ref|ZP_05990947.1| hypothetical protein COI_0249 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309845|gb|EEY11062.1| hypothetical protein COI_0249 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312651|gb|EEY13773.1| hypothetical protein COK_0132 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 73
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 356 GVAVAFDESIEVISQWLQQEHVRDVSVVPLSCLAK 390
+ +I V+ Q L Q +D+ +V + L +
Sbjct: 2 VIGHPRKNTISVLKQNLAQLP-QDIELVSVGNLWR 35
>gi|225682458|gb|EEH20742.1| hypothetical protein PABG_02973 [Paracoccidioides brasiliensis
Pb03]
Length = 1089
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 35/128 (27%), Gaps = 3/128 (2%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQH 102
Y+ ++ P + P P + T + D
Sbjct: 599 YLPAEYSPAEDPPTEDPPAEDPPAEGPPAEGPPAEGPPAEDPLAEGPTAEDPPAEDPPAE 658
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
D ++ + P P E+ G + K+ A++ + +PA +
Sbjct: 659 DPPAEDPPAEDPPAEDPAAENPPAEGPPAEDPPAEGPTAKDPPAEDPTAED---LPATES 715
Query: 163 NFCSNASG 170
+ + S
Sbjct: 716 SPTEDHSA 723
>gi|324010051|gb|EGB79270.1| DNA polymerase III, subunit gamma and tau [Escherichia coli MS
57-2]
Length = 643
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 5/125 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E +P +AP + P + P L +SQ Q
Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTP--TQVPPHPQSAPQQAPTVPLPETTSQVLAARQQ 418
Query: 109 D--ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ G T K + + + P L S + + V + PA + +
Sbjct: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478
Query: 167 NASGA 171
A+
Sbjct: 479 KATTP 483
>gi|300123600|emb|CBK24872.2| unnamed protein product [Blastocystis hominis]
Length = 453
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 10/125 (8%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND-----IS 111
+P ++P P T+P +I + P ++ S ++D I + S
Sbjct: 133 PLPTPQSFAMSPSPYTVPPHIYRRPYPQYEPPRIAEGFVRTPSPRYDFGIHSMHQPVPTS 192
Query: 112 GKTVVNKPTRSTSIDS-LPTIEERLILGLSKKEL----LAKNKVGREDTEVPAMDKNFCS 166
P S + + P + L +A T P +
Sbjct: 193 MPMGTVAPPPSMPMGTIAPPPSLPMGTIAPPPSLPMGTIAPPPSMPMGTIAPPPSSPVST 252
Query: 167 NASGA 171
A+
Sbjct: 253 IAAPP 257
>gi|303318787|ref|XP_003069393.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109079|gb|EER27248.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 2054
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 47/178 (26%), Gaps = 21/178 (11%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
+S +L P+R P R + + V + P
Sbjct: 1725 LSTNLPIPVRHSAPPRSPTNTTPVPPDANL-----------------SNPVHQNPLISPT 1767
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV---VN 117
S P P + + +P S+ + + + + VN
Sbjct: 1768 SAPSTAPPTPSVANIAGSNLPNPLIHPAGASKVVTPPLSTASIANSSHPNAPQLMRPPVN 1827
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNK-VGREDTEVPAMDKNFCSNASGARIA 174
+P T +L + E G A V + P+ F ++ R A
Sbjct: 1828 EPNAQTRTSTLASTTEASREGRPPANFAAATSNVPVTPNQPPSKAATFAKTSTPLRPA 1885
>gi|320034532|gb|EFW16476.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira]
Length = 2050
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 47/178 (26%), Gaps = 21/178 (11%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
+S +L P+R P R + + V + P
Sbjct: 1721 LSTNLPIPVRHSAPPRSPTNTTPVPPDANL-----------------SNPVHQNPLISPT 1763
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV---VN 117
S P P + + +P S+ + + + + VN
Sbjct: 1764 SAPSTAPPTPSVANIAGSNLPNPLIHPAGASKVVTPPLSTASIANSSHPNAPQLMRPPVN 1823
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNK-VGREDTEVPAMDKNFCSNASGARIA 174
+P T +L + E G A V + P+ F ++ R A
Sbjct: 1824 EPNAQTRTSTLASTTEASREGRPPANFAAATSNVPVTPNQPPSKAATFAKTSTPLRPA 1881
>gi|309357451|emb|CAP35783.2| CBR-KLP-7 protein [Caenorhabditis briggsae AF16]
Length = 743
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 35/138 (25%), Gaps = 20/138 (14%)
Query: 44 ILISHAFVGTISEMIPYSVIREI-----APIPLTIPLNIEDKQSP----SKRDNNTVCNQ 94
I + + + + S + R P+P + +K +P +
Sbjct: 118 IFMQNVPIRSSSPPEKPAPARRAPSPTEKPVPARRAPSPTEKPAPTRRAASPKAERFAVP 177
Query: 95 LKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED 154
+++ ++VV P + R + A V
Sbjct: 178 APPKTTRSTAN-------QSVVAAPPAPVEV----PKLSRRSVAPQPVAAPAPPPVIMNA 226
Query: 155 TEVPAMDKNFCSNASGAR 172
P+ S + R
Sbjct: 227 PRAPSPVARVPSPKNVPR 244
>gi|322697269|gb|EFY89050.1| hypothetical protein MAC_04825 [Metarhizium acridum CQMa 102]
Length = 768
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 50 FVGTISEMIPYSVI-REIAPIPLTIPLNIEDKQSPSKR-----DNNTVCNQLKNDSSQHD 103
GT P + I + AP+P P + S N + N
Sbjct: 30 PAGTPPPGHPPAQIPQHQAPLPGQTPPIGAASSTTSLPMNHPGAGNRPPSYTANYPPAGP 89
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLA 146
G + + G N+ S + P I +G + A
Sbjct: 90 GDRTSPLQGS---NRTPPSQMVGGPPPINTGAPVGYPPPNMAA 129
>gi|148261848|ref|YP_001235975.1| ABC-type branched-chain amino acid transport systems periplasmic
component-like protein [Acidiphilium cryptum JF-5]
gi|146403529|gb|ABQ32056.1| amino acid/amide ABC transporter substrate-binding protein, HAAT
family [Acidiphilium cryptum JF-5]
Length = 413
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 93/269 (34%), Gaps = 36/269 (13%)
Query: 15 KRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIP 74
R + + L+ F + +L A+ G + I
Sbjct: 37 ARPASIHAAEKQRKRLLIGTLFPETGAQTLLGDEAWRGVELAIDA---------ARAGID 87
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIE-E 133
+IE ++ + + + ++ D + T T + + +P +E +
Sbjct: 88 ADIEVLRADAANPDAAIRGMIRKAGKASDIAMILGSQSSTAAFAATAAAELAGIPYVELD 147
Query: 134 RLILGLSKKELLAKNKVGREDTEVPAMDKN---------FCSNASGARIAIVVSGLGISQ 184
G+++++ +++ T+ + ++ + + A R+A++ +G +
Sbjct: 148 APADGITRRDFKILSRICTTTTDFASAAESAITTLLIPGWKTGAERLRLALLF-DIGATD 206
Query: 185 TGTQRAINL------LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
A+ LP +++A+A+ D + ++ G E ++
Sbjct: 207 GSFAGAMLAACRRAGLPVVLSMAYATEAADFDEEVARMRRAGIELLIHA----------G 256
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
++ L + Q +Q+ R R + G GY
Sbjct: 257 RTAHVLLLYQAMQEAGWRPRMIIGAGPGY 285
>gi|238496087|ref|XP_002379279.1| polysaccharide deacetylase (NodB), putative [Aspergillus flavus
NRRL3357]
gi|220694159|gb|EED50503.1| polysaccharide deacetylase (NodB), putative [Aspergillus flavus
NRRL3357]
Length = 247
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 355 IGVAVAFDE-SIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
I + E ++ ++ L + R +V +S L + +
Sbjct: 200 IVICHDRREWTVPMLRVVLPELRRRGYEIVTVSELVRAGVEA 241
>gi|307826790|gb|ADN94524.1| circumsporozoite protein [Plasmodium knowlesi]
Length = 338
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 23/124 (18%), Gaps = 6/124 (4%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
+ P + AP P + P + Q
Sbjct: 97 RPGGEQPAPGPGGEQPAPGPGGE----QPAPRPGGEQPAPGPGGEQPAPGPGGEQPAPGP 152
Query: 111 SGKTVVNKP--TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
G+ +P + R + R E PA A
Sbjct: 153 GGEQPAPRPGGEQPAPGPGGEQPAPRPGGEQPAPGPGGEQPAPRPGGEQPAPGPGGEQPA 212
Query: 169 SGAR 172
R
Sbjct: 213 PAPR 216
>gi|268535084|ref|XP_002632675.1| Hypothetical protein CBG21601 [Caenorhabditis briggsae]
Length = 719
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 10/124 (8%), Positives = 28/124 (22%), Gaps = 1/124 (0%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
A + AP P ++ + R + + + +
Sbjct: 545 APRASAPRAPAPRASAPRAPAPRASAPRASAPRASAPRALAPGASAPSASAPRASAPRAS 604
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
R+++ + + ++ + R + + A
Sbjct: 605 APRASATRASAPRASAPRASAPRASAPRAS-APRDSAPRASAPRASAPRASAPRASAPRA 663
Query: 169 SGAR 172
S R
Sbjct: 664 SAPR 667
>gi|301754841|ref|XP_002913249.1| PREDICTED: mitogen-activated protein kinase-binding protein 1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 1515
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 8/171 (4%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVG---TISEMIPYSVI 63
P + P+R+ ++Q G+ L C+ + L ++ + G + M P
Sbjct: 845 APAANQGPRRRGRWAQP----GVELSVCSML-DLRQLETLAPSPRGASQDLLAMTPSCPG 899
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ P T + ++K + C + SQ +G D+ + +
Sbjct: 900 KHGQQAPETSHASQKEKPPRPQASQPCSCPHIIRLLSQEEGVFAQDLEPAPIEDGIVYPE 959
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
DS + + L + G +E + D + S +R++
Sbjct: 960 PSDSPTLDTSEFQVQAPARGTLGRVYPGSRGSEKHSPDSACSVDYSSSRLS 1010
>gi|85096529|ref|XP_960277.1| hypothetical protein NCU07116 [Neurospora crassa OR74A]
gi|28921762|gb|EAA31041.1| predicted protein [Neurospora crassa OR74A]
Length = 2055
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 11/127 (8%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
V ++ P +V A P P++ +P+ + + + K +
Sbjct: 1823 PVTGVTPGAPGAVTTSAAAAPGRAPVSTS-TPAPATTGISQLPSANKIQANPTRSA---- 1877
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+V + T + T+ + + K V + A
Sbjct: 1878 ---PASVPTRAIAPT--GTRSTLSAKALEIRPPKPASTSTPVAASTGTGLTQAQAQVLVA 1932
Query: 169 SGARIAI 175
AR+A+
Sbjct: 1933 KAARLAL 1939
>gi|310815587|ref|YP_003963551.1| Divergent polysaccharide deacetylase family [Ketogulonicigenium
vulgare Y25]
gi|308754322|gb|ADO42251.1| Divergent polysaccharide deacetylase family [Ketogulonicigenium
vulgare Y25]
Length = 242
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 36/126 (28%), Gaps = 5/126 (3%)
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
+ ++D+ + + + A V +
Sbjct: 58 GAAPDAALRPDLPQRAADAPATLDAATPMPSAPPVQTAPLPQTAPAPVALPSLPQTSRPI 117
Query: 163 NFCSNASGARI----AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKK 218
+ + I AIV+ G+ G +A+ LP +T+A + M +
Sbjct: 118 EAYAAPTAPVIGRALAIVMIDDGM-MVGGPQAVAALPMPVTIAIDPSRADATDKMNAYRA 176
Query: 219 KGQEAI 224
G E +
Sbjct: 177 MGIEVV 182
>gi|302654713|ref|XP_003019157.1| hypothetical protein TRV_06841 [Trichophyton verrucosum HKI 0517]
gi|291182861|gb|EFE38512.1| hypothetical protein TRV_06841 [Trichophyton verrucosum HKI 0517]
Length = 836
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 72/280 (25%), Gaps = 50/280 (17%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
+ E +P IRE + + + K + +
Sbjct: 584 RQGVLERMPPPQIREEQRVLGEATNKRQSRLLKDKSKKPSKPTEQDMLLDLMG----GGS 639
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
T + S ++ + + L G S E P SN +
Sbjct: 640 EPPTESTSGKTNGSQNTADLLADILGGGTS------------EPAPQPQPTSTKASNVND 687
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQ 230
++ G + Q+A + P T A A S E
Sbjct: 688 -----IMDLFGSNGASQQQATSGQPGRPTPASAPATPSPSA---------HEVF------ 727
Query: 231 AFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI-F 289
+ L+VT VQ+ L + + ++ G L + + +
Sbjct: 728 ---------NKNDLQVTLQVQRNSAGTCQILAKFRNTSALDSFSGVGLQAAVPKTQKLQL 778
Query: 290 KEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLD 329
K L DG +A + M A L LD
Sbjct: 779 SAINKSEL----DGGDEGTQAMRIAAASGIYTMYALLVLD 814
>gi|291299153|ref|YP_003510431.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Stackebrandtia nassauensis DSM 44728]
gi|290568373|gb|ADD41338.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Stackebrandtia nassauensis DSM 44728]
Length = 497
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/169 (10%), Positives = 35/169 (20%), Gaps = 21/169 (12%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
P P P + + + S +
Sbjct: 141 AGPEPGASPATAQTVAGGGGPASTGAGGGNPDASPATAQTDAGGSDPHAAAAGSGNPDAA 200
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQT 185
+ + + + V R + + + AR
Sbjct: 201 GAGDGVS-APVEAWPSAHSGFGSAVARPTATATPAAQRAATGTTAAR------------- 246
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ----IPMQ 230
+A PA + G A++ G E L +PM+
Sbjct: 247 ---QAATGPPAARRVVIVGAGVLGCEIAAAARELGHEVTLVEPGPVPME 292
>gi|213404182|ref|XP_002172863.1| kinesin-like protein [Schizosaccharomyces japonicus yFS275]
gi|212000910|gb|EEB06570.1| kinesin-like protein [Schizosaccharomyces japonicus yFS275]
Length = 806
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 3/129 (2%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIE---DKQSPSKRDNNTVCNQLKNDSSQHDGQ 105
A T IP IR P P I P + +N +++ +
Sbjct: 25 ALRDTSMSSIPPPTIRAGIPAPRVTKPRISLSTLSSDPQQLKSNYQSSKMPPPTVSAAHH 84
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
G +V K S+ P R L +S+ + + G + ++
Sbjct: 85 PSPVGGGSIIVGKTRPSSQSAFAPPSATRPKLSMSRPSSSSSSGTGYRSVKAYDLESPTT 144
Query: 166 SNASGARIA 174
AS A ++
Sbjct: 145 PLASAAALS 153
>gi|301605820|ref|XP_002932540.1| PREDICTED: histone-lysine N-methyltransferase MLL3-like [Xenopus
(Silurana) tropicalis]
Length = 5215
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 10/123 (8%), Positives = 23/123 (18%), Gaps = 3/123 (2%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
V + P R + P + P P D +
Sbjct: 2336 PVPSDPYAKPPGTPRPVPSDPYSQPPGT---PRPVPSDPYSQPPGTPRPVPSDPYSQPPG 2392
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ ++ + + + + + T P +
Sbjct: 2393 TPRPVPSDPYSQPPGTPRPVPSDPYSQPPGTPRPVPSDPYSQPPGTPRPVPSDPYSQPPG 2452
Query: 170 GAR 172
R
Sbjct: 2453 TPR 2455
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 11/166 (6%), Positives = 29/166 (17%), Gaps = 15/166 (9%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P+ + + + + V + P R +
Sbjct: 2320 RPVSVDPYSQPPGTPRPVPSDPYAKPPG------------TPRPVPSDPYSQPPGTPRPV 2367
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P + P P D + + ++
Sbjct: 2368 PSDPYSQPPGT---PRPVPSDPYSQPPGTPRPVPSDPYSQPPGTPRPVPSDPYSQPPGTP 2424
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ + + + + T P + R
Sbjct: 2425 RPVPSDPYSQPPGTPRPVPSDPYSQPPGTPRPVPSDPYSQPPGTPR 2470
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 11/166 (6%), Positives = 29/166 (17%), Gaps = 15/166 (9%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P+ + + + + V + P R +
Sbjct: 2335 RPVPSDPYAKPPGTPRPVPSDPYSQPPG------------TPRPVPSDPYSQPPGTPRPV 2382
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P + P P D + + ++
Sbjct: 2383 PSDPYSQPPGT---PRPVPSDPYSQPPGTPRPVPSDPYSQPPGTPRPVPSDPYSQPPGTP 2439
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ + + + + T P + R
Sbjct: 2440 RPVPSDPYSQPPGTPRPVPSDPYSQPPGTPRPVPSDPYSQPPGTPR 2485
>gi|221209494|ref|ZP_03582475.1| major facilitator superfamily [Burkholderia multivorans CGD1]
gi|221170182|gb|EEE02648.1| major facilitator superfamily [Burkholderia multivorans CGD1]
Length = 512
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 7/185 (3%)
Query: 28 GLFLLFCTFI--VGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK 85
G+ + F VG ++ + S A + M+P VI I P+ +
Sbjct: 330 GVVIPGGLFTIAVGFALMRIGSAAEHASWLTMLPGCVIAGIGLGLANTPVTNTTTGAVPS 389
Query: 86 RDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELL 145
+ + G +V + I + + L+++
Sbjct: 390 ARAGMASGIDMSARMISLALNIAMM-GFVLVAGIVANLKGGVAAAIGDASLRALAQEIAA 448
Query: 146 AKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN 205
+ + R + A +V G G + +L +AFA
Sbjct: 449 GRTEDLRAIAPALTQADPTGAALHAA----LVHGFGWVMVYGAAGVAVLATASAIAFAPA 504
Query: 206 GNSLD 210
S
Sbjct: 505 RRSAA 509
>gi|301754843|ref|XP_002913250.1| PREDICTED: mitogen-activated protein kinase-binding protein 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 1509
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 8/171 (4%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVG---TISEMIPYSVI 63
P + P+R+ ++Q G+ L C+ + L ++ + G + M P
Sbjct: 839 APAANQGPRRRGRWAQP----GVELSVCSML-DLRQLETLAPSPRGASQDLLAMTPSCPG 893
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ P T + ++K + C + SQ +G D+ + +
Sbjct: 894 KHGQQAPETSHASQKEKPPRPQASQPCSCPHIIRLLSQEEGVFAQDLEPAPIEDGIVYPE 953
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
DS + + L + G +E + D + S +R++
Sbjct: 954 PSDSPTLDTSEFQVQAPARGTLGRVYPGSRGSEKHSPDSACSVDYSSSRLS 1004
>gi|215485550|ref|YP_002327981.1| DNA polymerase III subunits gamma and tau [Escherichia coli O127:H6
str. E2348/69]
gi|312964465|ref|ZP_07778759.1| DNA polymerase III, subunits gamma and tau [Escherichia coli
2362-75]
gi|215263622|emb|CAS07953.1| DNA polymerase III/DNA elongation factor III, tau and gamma
subunits [Escherichia coli O127:H6 str. E2348/69]
gi|312290942|gb|EFR18818.1| DNA polymerase III, subunits gamma and tau [Escherichia coli
2362-75]
Length = 643
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 1/123 (0%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E +P +AP + P + + + + TV Q
Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSALQQAPTVPLPETTSQVLAARQQLQ 420
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+ G T K + + + P L S + + V + PA + + A
Sbjct: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480
Query: 169 SGA 171
+
Sbjct: 481 TTP 483
>gi|270013414|gb|EFA09862.1| hypothetical protein TcasGA2_TC012010 [Tribolium castaneum]
Length = 1195
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 27/117 (23%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ P SP+K T G + K
Sbjct: 865 PAAEKKPKAKTPTAAKKPTPAKPSTAASPAKAKPTTTPKTRAAAPKPSTGAVPKQTVPKA 924
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
KP + + + + + + D+ PA++K A+
Sbjct: 925 AAPKPRPTATKTNPTEKKPLTNGDVKPPVKASLTARKSTDSPKPALNKASPRPATAP 981
>gi|152975993|ref|YP_001375510.1| sporulation polysaccharide deacetylase PdaB [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024745|gb|ABS22515.1| Sporulation polysaccharide deacetylase PdaB [Bacillus cytotoxicus
NVH 391-98]
Length = 241
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 358 AVAFDESIEVISQWLQQEHVRDVSVVPLSCLAKLSS 393
++IE +++ L + R V +S L +
Sbjct: 206 GSDRSQTIEALAKILPELQQRGYRFVKVSELLRYKH 241
>gi|327300655|ref|XP_003235020.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892]
gi|326462372|gb|EGD87825.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892]
Length = 1877
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 33/151 (21%), Gaps = 12/151 (7%)
Query: 18 SFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNI 77
Q +L +F + S S T+ P + R P+ P +
Sbjct: 1692 PHSPQPQPQLQVFSQASDQMQSPSQVSASSQGRSETVPTQAPPTQSR-----PVQGPPST 1746
Query: 78 EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP-------T 130
+P + T P ++ + P
Sbjct: 1747 PVSLAPPTLPTPQAPVLAPRAQGPATSICRAPSDPSTPTLAPATASVSQAPPVSLQTQQP 1806
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMD 161
I + + L + R P
Sbjct: 1807 ISPSVASLQNPGNLGKQATQSRSTQPSPLPP 1837
>gi|224588186|gb|ACN58810.1| GGDEF family protein [uncultured bacterium BLR9]
Length = 765
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 27/54 (50%)
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGV 357
+ +++ A +L + ++ +L D +R + ++L+ +AR G+ + V
Sbjct: 315 TVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAV 368
>gi|169775285|ref|XP_001822110.1| polysaccharide deacetylase (NodB) [Aspergillus oryzae RIB40]
gi|83769973|dbj|BAE60108.1| unnamed protein product [Aspergillus oryzae]
Length = 261
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 355 IGVAVAFDE-SIEVISQWLQQEHVRDVSVVPLSCLAKLSSPS 395
I + E ++ ++ L + R +V +S L + +
Sbjct: 214 IVICHDRREWTVPMLRVVLPELRRRGYEIVTVSELVRAGVEA 255
>gi|180482|gb|AAA52014.1| cholesterol esterase [Homo sapiens]
Length = 747
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 24/129 (18%), Gaps = 15/129 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 598 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 654
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-------EDTEVPAMD 161
SG P T P + G + E VP
Sbjct: 655 GDSGA----PPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTG 710
Query: 162 KNFCSNASG 170
+ A
Sbjct: 711 DSGAPCAPR 719
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 27/128 (21%), Gaps = 14/128 (10%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQ 105
+ +P + E P+P +P + P ++ + S
Sbjct: 559 EATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV 618
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED--TEVPAMDKN 163
SG P T P + G + +
Sbjct: 619 PPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVP 674
Query: 164 FCSNASGA 171
++
Sbjct: 675 PTGDSGAP 682
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 14/129 (10%)
Query: 53 TISEMIPYSVIREIAPIPLT-------IPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDG 104
+ + +P + E AP+P T +P + P ++ + S
Sbjct: 569 SEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 628
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
SG P T P + G + A
Sbjct: 629 VPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPV 684
Query: 163 NFCSNASGA 171
++
Sbjct: 685 PPTGDSGAP 693
>gi|322800325|gb|EFZ21329.1| hypothetical protein SINV_01589 [Solenopsis invicta]
Length = 762
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 31/100 (31%), Gaps = 8/100 (8%)
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
I E P+P + QSP + + + + +V + +
Sbjct: 366 ISEPIPVPCQRNAIQQPSQSPLTNAARSGGSSVPRSQPISMKR--------SVDSHRSHP 417
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
I SL + ++G L++ +V + +
Sbjct: 418 PDIGSLSPPSVQFVIGTPPGRRLSETPPPPNTWQVSPVAR 457
>gi|319757421|gb|ADV69363.1| Translation initiation factor 2 (IF-2; GTPase) [Streptococcus suis
JS14]
Length = 881
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 32/133 (24%), Gaps = 8/133 (6%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS------SQ 101
A S AP + + +P D + Q
Sbjct: 349 QAPSAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQAPSIPEEKPQ 408
Query: 102 HDGQIQNDI--SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
+ + + + T +P S P E+ +K+ E + P+
Sbjct: 409 VPEEPKQEAPSAPSTPEKQPEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPS 468
Query: 160 MDKNFCSNASGAR 172
K+ S
Sbjct: 469 TPKDEPQAPSIPE 481
Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 31/131 (23%), Gaps = 8/131 (6%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS------SQHD 103
S AP + + +P D + Q
Sbjct: 428 PEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQAPSIPEEKPQVP 487
Query: 104 GQIQNDI--SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ + + + T +P S P E+ +K+ E + P+
Sbjct: 488 EEPKQEAPSAPSTPEKQPEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTP 547
Query: 162 KNFCSNASGAR 172
K+ S
Sbjct: 548 KDEPQAPSIPE 558
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 31/131 (23%), Gaps = 8/131 (6%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS------SQHD 103
S AP + + +P D + Q
Sbjct: 505 PEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQAPSIPEEKPQVP 564
Query: 104 GQIQNDI--SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ + + + T +P S P E+ +K+ E + P+
Sbjct: 565 EEPKQEAPSAPSTPEKQPEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTP 624
Query: 162 KNFCSNASGAR 172
K+ S
Sbjct: 625 KDEPQVPSIPE 635
>gi|295673750|ref|XP_002797421.1| ser/Thr protein phosphatase family protein [Paracoccidioides
brasiliensis Pb01]
gi|226282793|gb|EEH38359.1| ser/Thr protein phosphatase family protein [Paracoccidioides
brasiliensis Pb01]
Length = 679
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 9/127 (7%), Positives = 27/127 (21%), Gaps = 9/127 (7%)
Query: 45 LISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG 104
+ A + ++ + +PS + G
Sbjct: 331 GFNFAHRAGKPSTSSAPITQQPVALSGLPGAPGASGAAPSAPSG---------AQPRSAG 381
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
+ + + + + L K ++ V + PA +
Sbjct: 382 GVSQFGQAPVPNRTTVPTYQQQNQVPSQNKPAGPLPPKTTVSPAPVIPNNKAKPATSQPV 441
Query: 165 CSNASGA 171
+ +
Sbjct: 442 GAQVNVP 448
>gi|49246223|gb|AAT58247.1| PMEL17 protein [Gallus gallus]
Length = 764
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 292 FAAXLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 347
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 348 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVADAAAGTDPT 407
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 408 ADPLPPTSVSSGGDAP 423
>gi|297670699|ref|XP_002813497.1| PREDICTED: proline-rich transmembrane protein 3-like [Pongo abelii]
Length = 982
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 40/138 (28%), Gaps = 16/138 (11%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
P P P E PSK + + + G ++ + K+++ P
Sbjct: 314 PDAKDSPGPQPTD-PPASEAPDGPSKPEIAAMNGADPISPQRVRGAVEAPGTPKSLIPGP 372
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ E + L E GR + PA S +
Sbjct: 373 SDP---GPAANRTESPMGALQPDEAEE--WPGRPQSHPPAPPVQAPSTSRR--------- 418
Query: 180 LGISQTGTQRAINLLPAN 197
G+ + TQRA+ P
Sbjct: 419 -GLIRVTTQRALGQPPPP 435
>gi|26327301|dbj|BAC27394.1| unnamed protein product [Mus musculus]
Length = 508
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 71/246 (28%), Gaps = 33/246 (13%)
Query: 58 IPYSVIREIAPIPLTIPLNI-EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
+P V P P T P P K +++ Q +Q
Sbjct: 118 VPPPVATPFVPKPSTKPAPGGTAPLPPWKTPSSSQPPPQPQAKPQVQLHVQPQAKPHV-- 175
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
+P +S ++ P R L + V + T V + + G +
Sbjct: 176 -QPQPVSSANTQP----RGPLSQAPTPAPKFAPVAPKFTPVVSKFSPGAPSGPGPQ---- 226
Query: 177 VSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI------PMQ 230
Q+ + P + + ++ + A++K + + + P Q
Sbjct: 227 ---------PNQKMV---PPDAPSSVSTGSPQPPSFTY-AQQKEKPLVQEKQHPQPPPAQ 273
Query: 231 AFDE--SYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVI 288
++ S TLK + ++QL +L + +N A+
Sbjct: 274 NQNQVRSPGGPGPLTLKEVEELEQLTQQLMQDMEHPQRQSVAVNESCGKCNQPLARAQPA 333
Query: 289 FKEFAK 294
+ +
Sbjct: 334 VRALGQ 339
>gi|322695610|gb|EFY87415.1| protein transport protein (SEC31) [Metarhizium acridum CQMa 102]
Length = 1251
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 32/115 (27%), Gaps = 7/115 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
+ + + IP P + ++ +P V + + + +G+ N
Sbjct: 980 VQSPLAGQTHGIPPPRPSSTANQYAPPAPQPGAVPSPIPQVVPRTASPYNAPPAGRPPSN 1039
Query: 118 KPTRSTSID-----SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ S + + + G N G + P+ + S
Sbjct: 1040 RYAPSPAAQRPNQPATSAMPPPPAAGSRPPPPA--NPYGAPPQQTPSPGQYAPSP 1092
>gi|320354471|ref|YP_004195810.1| hypothetical protein Despr_2378 [Desulfobulbus propionicus DSM
2032]
gi|320122973|gb|ADW18519.1| hypothetical protein Despr_2378 [Desulfobulbus propionicus DSM
2032]
Length = 464
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 3/113 (2%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT-VV 116
+V + P P + + S + TV + S + + V
Sbjct: 144 SKKTVAQRNEDKPAAEPATTTAEPAASGQPPATVDTAVSGPSPRTPASTEGPAPKAAEQV 203
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+P+R + + G + + P+ D+ + A
Sbjct: 204 AQPSRPSEQTTQQQSASSPSQGEAP--AAQTVGAEPVASPAPSKDQPSPAPAK 254
>gi|134074678|emb|CAK44710.1| unnamed protein product [Aspergillus niger]
Length = 663
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 1/119 (0%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
E I + AP+P P + + Q ++ +S++++ ++ IS
Sbjct: 104 DDEEDIQPDETEQEAPMPEATPTLVSEPQDEPSPSEQLSPDRSPKESTKYETMVEVRISP 163
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
K V +P R T R K + D + A + + A
Sbjct: 164 KVSVERPRRRKQATEGTTESGRRSARKDKP-APRLSSGCITDEKANAYVRPILNEALSP 221
>gi|159901130|ref|YP_001547377.1| ErfK/YbiS/YcfS/YnhG family protein [Herpetosiphon aurantiacus ATCC
23779]
gi|159894169|gb|ABX07249.1| ErfK/YbiS/YcfS/YnhG family protein [Herpetosiphon aurantiacus ATCC
23779]
Length = 370
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 14/151 (9%)
Query: 30 FLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNN 89
+ G+S + + + ++ AP P+ P + +P++ +
Sbjct: 180 VAAASGLVEGMS-----YEQPYLFEFDPVAPAPVQTAAPQPVAEPTQVPPTAAPAQPTSQ 234
Query: 90 TVCNQLKN-DSSQHDGQIQNDIS--------GKTVVNKPTRSTSIDSLPTIEERLILGLS 140
V + +I+ DIS TVV +T D T +
Sbjct: 235 PVPTATPKPANPNVGKRIEVDISKQWLYAYENGTVVFDAPVATGKDGFNTPTGSYEIYAK 294
Query: 141 KKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ +G E VP + N S A
Sbjct: 295 VPLQTMRGSLGGETWVVPNVPHAMYFNGSVA 325
>gi|73956307|ref|XP_536673.2| PREDICTED: similar to Plasminogen activator inhibitor 1 RNA-binding
protein (PAI1 RNA-binding protein 1) (PAI-RBP1) [Canis
familiaris]
Length = 638
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 55/170 (32%), Gaps = 6/170 (3%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
H LR+ P R++ LG+ +L G + I H+ V E
Sbjct: 143 HSLREVPPLRRARRIVTPRILGIVVLAPGAASGEATLAYIPHSAVRRWPLPDVCLAPEE- 201
Query: 67 APIPLTIPLNIEDKQSP---SKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
P PL+ P ++ + + + ++ G +Q G V N+ +
Sbjct: 202 KPAPLSRPGHLVGRAEAGALGSARPAAIRGGTRRRATIMPGHLQEGF-GCVVTNRFDQLF 260
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
+S P E KKE G S+A+G ++
Sbjct: 261 DDESDP-FEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSSAAGKQL 309
>gi|164659500|ref|XP_001730874.1| hypothetical protein MGL_1873 [Malassezia globosa CBS 7966]
gi|159104772|gb|EDP43660.1| hypothetical protein MGL_1873 [Malassezia globosa CBS 7966]
Length = 691
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 56/202 (27%), Gaps = 22/202 (10%)
Query: 41 SIYILISHAFVGTISEMIPYSVIREIAPIPLTIPL-NIEDKQSPSKRDNNTVCNQLKNDS 99
++ + + + E AP+ P PS + K +
Sbjct: 40 ALVAAFEEHVRPHLVKAESMQAVPEAAPVTPATPAMPAMPATHPSAASSALSTQPKKEST 99
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK---ELLAKNKVGREDTE 156
G G V++ S+ + P + + ++
Sbjct: 100 PPSMGI---GTPGMRFVSQEQPGASLKASPPASMDIRFSDENPFQRPAVTPTPSRKKAQR 156
Query: 157 VPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEA 216
+ + S A+ T +A++ +P + + D+ + A
Sbjct: 157 LSTPVAKPLTPTSSAK---------AKSTPVSKAMSHMPHTTS----PYTRTPDKVRQIA 203
Query: 217 KKKGQEAILQIPMQAFDESYNE 238
E L +P QA + S ++
Sbjct: 204 MAASHE--LHVPGQAIEMSDSD 223
>gi|313204754|ref|YP_004043411.1| hypothetical protein Palpr_2290 [Paludibacter propionicigenes WB4]
gi|312444070|gb|ADQ80426.1| hypothetical protein Palpr_2290 [Paludibacter propionicigenes WB4]
Length = 421
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 14/138 (10%), Positives = 40/138 (28%), Gaps = 1/138 (0%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVI 63
DL + ++ +RK F +G+ + S++ + +
Sbjct: 49 DLERSIMQQATRRKRFVPYRAWAIGVAASVVLMLGIGSLFYFRTEQPKVIALHPPVRVTL 108
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+IP E + + + D + + + + N+ +
Sbjct: 109 PPADTARKSIPAPEERAVAQHLDKKLRKPVAVLSVPPVADSNAEPIKTQEEI-NESKQHI 167
Query: 124 SIDSLPTIEERLILGLSK 141
S+ + + + +K
Sbjct: 168 SVSDVSPGYDIADVHSTK 185
>gi|108760007|ref|YP_632356.1| hypothetical protein MXAN_4181 [Myxococcus xanthus DK 1622]
gi|108463887|gb|ABF89072.1| hypothetical protein MXAN_4181 [Myxococcus xanthus DK 1622]
Length = 1138
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 30/135 (22%), Gaps = 15/135 (11%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIED---------KQSPSKRDNNTVCNQLKNDSSQHDG 104
+ +P A P +P + D + +
Sbjct: 630 GAPRLPEVRTETPASESEQTPTAAPSESEFAAFPMPGAPVQPDAAQPPSPSETAPGH-GA 688
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLI----LGLSKKELLAKNKVGREDTEVPAM 160
+ S + P + P EE + + EDT P
Sbjct: 689 PLSGQPSTSDEASPPPGAAPDHGAPPSEESPANTAEGAVPPPLAPQSEQPATEDT-APPS 747
Query: 161 DKNFCSNASGARIAI 175
+A A A+
Sbjct: 748 PSPAAEDAPTALTAL 762
>gi|83770653|dbj|BAE60786.1| unnamed protein product [Aspergillus oryzae]
Length = 1265
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 16/150 (10%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
LT+P K++ + + Q+ S V + P +ST +
Sbjct: 664 TLTVPSRSALKEAIAAHKKARLA--PAKTLPPRPESAQSSFSETKVSDPPAKSTGRTARA 721
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVS---------GL 180
+ + + ++ R PA + S + A A+ + L
Sbjct: 722 PLSSLSSAPMRPGAKPRRPELAR-----PATADPYSSRKTAATDAVHIDSSPRPRRVANL 776
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLD 210
G + + T+ L +T+A S
Sbjct: 777 GQAPSSTKSKPKKLDIPMTMAVDPVAPSAS 806
>gi|158314251|ref|YP_001506759.1| hypothetical protein Franean1_2421 [Frankia sp. EAN1pec]
gi|158109656|gb|ABW11853.1| protein of unknown function DUF559 [Frankia sp. EAN1pec]
Length = 1724
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 18/98 (18%), Gaps = 4/98 (4%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P A I N +P+ + + I + +
Sbjct: 1472 TPLPPTVPTARIAPDTQPNAGSPDAPTAPLRPAGPGTPPDSTGPGGSGIADLSTPGV--- 1528
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT 155
P P E VG D
Sbjct: 1529 -PPGVPYQRPEPPGESTATGPAHPGPSRTGPPVGAGDA 1565
>gi|309365397|emb|CAP23087.2| hypothetical protein CBG_01887 [Caenorhabditis briggsae AF16]
Length = 1046
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 28/128 (21%), Gaps = 15/128 (11%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS---------PSKRDNNTVCNQLKNDSSQHDGQIQN 108
P R P L P E+ + P Q + + +
Sbjct: 299 APPEGKRPRTPNDLDTPAADEEPVAEEADAASEVPPTPKTAASEKQSVPATPRSAVPSEV 358
Query: 109 DISGKTVVNKPTRSTSIDSLP------TIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
+ K+ T + P + A ++V D
Sbjct: 359 PATPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSDV 418
Query: 163 NFCSNASG 170
++G
Sbjct: 419 PPTPKSNG 426
>gi|242088423|ref|XP_002440044.1| hypothetical protein SORBIDRAFT_09g024980 [Sorghum bicolor]
gi|241945329|gb|EES18474.1| hypothetical protein SORBIDRAFT_09g024980 [Sorghum bicolor]
Length = 659
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 31/124 (25%), Gaps = 1/124 (0%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQIQ 107
+ AP+P +PL + PSK + + + +
Sbjct: 80 DMDKDAPLPSKSPRMNRAAPVPPKLPLADKATPVPSKLPSADKATPVPPKALPVNKTTLV 139
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
S P R S R K L + + D P ++ +
Sbjct: 140 RPKSPAVDKATPIRPKSPAVDKATPVRSQSPAVDKATLVRPQSPAVDKATPVHPQSPAID 199
Query: 168 ASGA 171
+
Sbjct: 200 KATP 203
>gi|296478893|gb|DAA21008.1| proteoglycan 4 [Bos taurus]
Length = 1445
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 28/123 (22%), Gaps = 2/123 (1%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP--SKRDNNTVCNQLKNDSSQHDGQIQ 107
T + + +E AP + +P K+ T + + +
Sbjct: 458 PAPTTPKEPAPTTPKETAPTTKEPAPTTPKQPAPTTPKQPAPTTPKEPAPTTPKEPAPTT 517
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ + T +PT + E + + P K
Sbjct: 518 KEPAPTTKEPEPTTKEPAPTTTPKEPAPTTPKEPAPTTKEPEPTTLKQPAPTTPKEPAPT 577
Query: 168 ASG 170
Sbjct: 578 TPK 580
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 27/93 (29%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
T + + +E AP P + +P+ ++ + ++ +
Sbjct: 489 PAPTTPKQPAPTTPKEPAPTTPKEPAPTTKEPAPTTKEPEPTTKEPAPTTTPKEPAPTTP 548
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
+P +T PT + K+
Sbjct: 549 KEPAPTTKEPEPTTLKQPAPTTPKEPAPTTPKE 581
>gi|29171526|ref|NP_808710.1| traN protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|29171600|ref|NP_808646.1| traN protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28856019|gb|AAO59076.1| traN protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28856093|gb|AAO59149.1| traN protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 352
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 4/112 (3%)
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
E AP +P + + + N ++Q G S +
Sbjct: 26 EAAPAKSAVPPSAPVTPAAGAAPSGWATGVGVNPAAQKAGSPAQGNGPVNAAPAQQPSGN 85
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
P E L ++ + +V +DK ++AIV
Sbjct: 86 DPLPPPPSELFQKAQDSVSPLTPQEIRQLRGQVGEVDKAMA----APQVAIV 133
>gi|119608437|gb|EAW88031.1| carboxyl ester lipase (bile salt-stimulated lipase), isoform CRA_b
[Homo sapiens]
Length = 707
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 33/127 (25%), Gaps = 11/127 (8%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQIQNDISG 112
+ +P + E P+ P + + +P ++ + S SG
Sbjct: 587 EATPVPPTGDSEATPV----PPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSG 642
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED--TEVPAMDKNFCSNASG 170
P T P + G + + A ++
Sbjct: 643 A----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTDDSKE 698
Query: 171 ARIAIVV 177
A++ V+
Sbjct: 699 AQMPAVI 705
>gi|281203501|gb|EFA77701.1| hypothetical protein PPL_12310 [Polysphondylium pallidum PN500]
Length = 421
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 21/100 (21%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
P P + P + V + + + VV +
Sbjct: 288 PTPAPASTPAPVSKPVVTPAPKPTPVVTPAPVVEEPTPAPVVEEPTPAPVVVEEPTPEPT 347
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ + + + L V E T V
Sbjct: 348 PVVEEPTPAVEESIPEPPLEEPTTVVEEPTPVVEEPTPVS 387
>gi|221200456|ref|ZP_03573498.1| major facilitator superfamily [Burkholderia multivorans CGD2M]
gi|221206136|ref|ZP_03579150.1| major facilitator superfamily [Burkholderia multivorans CGD2]
gi|221174148|gb|EEE06581.1| major facilitator superfamily [Burkholderia multivorans CGD2]
gi|221179797|gb|EEE12202.1| major facilitator superfamily [Burkholderia multivorans CGD2M]
Length = 512
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 51/185 (27%), Gaps = 7/185 (3%)
Query: 28 GLFLLFCTFI--VGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK 85
G+ + F G ++ + S A + M+P VI I P+ +
Sbjct: 330 GVVIPGGLFTIAAGFALMRIGSAAEHASWLTMLPGCVIAGIGLGLANTPVTNTTTGAVPS 389
Query: 86 RDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELL 145
+ + G +V S TI + + L+++
Sbjct: 390 ARAGMASGIDMSARMISLALNIAMM-GFVLVAGIVASLKGGVAATIGDAPLRALAQEIAA 448
Query: 146 AKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN 205
+ + A + A +V G G + +L +AFA
Sbjct: 449 GRTEDLHAIAPALAQADPTGAALHAA----LVHGFGWVMVYGTVGVAVLATASAIAFAPA 504
Query: 206 GNSLD 210
S
Sbjct: 505 RRSAA 509
>gi|302423530|ref|XP_003009595.1| mixed-linked glucanase [Verticillium albo-atrum VaMs.102]
gi|261352741|gb|EEY15169.1| mixed-linked glucanase [Verticillium albo-atrum VaMs.102]
Length = 921
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 29/130 (22%), Gaps = 13/130 (10%)
Query: 53 TISEMIPYSVIREIAP-------IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQ 105
+ + P P+ + + T +
Sbjct: 745 EEPTPVVPITPEQPTPEYPAPEEPIPETPVPEQPTPESPTPEQPTPEQPTPEQPTPEQPT 804
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ + +PT I PT EE L G + A + VP
Sbjct: 805 PEQPTPEQPTPEQPTPEQPIPEQPTPEEPLTPGQPTPDYPAPEE------PVPQPPSPTA 858
Query: 166 SNASGARIAI 175
S AI
Sbjct: 859 SQVVPPPPAI 868
>gi|115665297|ref|XP_780931.2| PREDICTED: similar to complement component C3 [Strongylocentrotus
purpuratus]
Length = 3023
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 44/170 (25%), Gaps = 16/170 (9%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G I+ +P P P ++ +K+ ++ +
Sbjct: 93 GRGISANSRLGIQNASPQPSVPNAATTQLPGPPAKNAYVAPLAMKSPTATQPSTELPVLP 152
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ + ++ + P + + + + + G PA K A
Sbjct: 153 PGA-ASTQATAAAMSTSPLVSSPPPISTPVEPVKQNSLPGPPKVRSPAKTKGARGVKRKA 211
Query: 172 RIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
T T + P I A + + K AK G+
Sbjct: 212 ------------DTTTPTTVIEPPEPI---VAPSADYHLAQAKPAKIPGR 246
>gi|83773150|dbj|BAE63277.1| unnamed protein product [Aspergillus oryzae]
Length = 758
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 46/184 (25%), Gaps = 22/184 (11%)
Query: 1 MSIDLNHPLRKKTPKRKSFY-------------SQIISRLGLFLLFCTFIVGLSIYILIS 47
MS+ N P P R + S G+ T +
Sbjct: 529 MSLSDNTPPSAPYPDRPPSRARPVYPPGYSVPDPRPSSAFGINPNIRTSAPNYNRAASYG 588
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS-----QH 102
+G S A P +P + N+ +L + +
Sbjct: 589 PGPMGYRSPAPVTPTTSGPASPTSATPKLDIGYSAPIESPNSRRPQRLDSTPPDRRPVRT 648
Query: 103 DGQIQNDISGK----TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
Q G T + T +S+P L + K A V ++ P
Sbjct: 649 PVSAQGGPVGSPKPVTSPSSATFPQRSESMPPPSAPLASSTTPKPSSASASVSQKPAAQP 708
Query: 159 AMDK 162
A +
Sbjct: 709 AKSQ 712
>gi|116747845|ref|YP_844532.1| hypothetical protein Sfum_0397 [Syntrophobacter fumaroxidans MPOB]
gi|116696909|gb|ABK16097.1| hypothetical protein Sfum_0397 [Syntrophobacter fumaroxidans MPOB]
Length = 773
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 45/178 (25%), Gaps = 8/178 (4%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVI 63
D++ + R+ + I + + L G + + E P
Sbjct: 505 DVHASDDARGTLRRRAIASIPASVPEQALASVPGSGPAPVKEQPSSETTARPERSPLQAE 564
Query: 64 REIAPIPLTIP-LNIEDKQSPSKRDNNTVCNQLKN--DSSQHDGQIQNDI-----SGKTV 115
P+ +P L +P+ + N + S S ++
Sbjct: 565 AASVPVAAGVPGLTNTSVPNPAPNERNDSQGNAPDRTASPVPGDTPDGGAGKFAGSTASI 624
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
+ P E+ ++G + + R + D + +
Sbjct: 625 SGGGQEPKGEAAEPGEEKIAMVGGPQVAMAVPVPSARTSAPEKSKDVAPAAPPGTPLV 682
>gi|242094294|ref|XP_002437637.1| hypothetical protein SORBIDRAFT_10g030940 [Sorghum bicolor]
gi|241915860|gb|EER89004.1| hypothetical protein SORBIDRAFT_10g030940 [Sorghum bicolor]
Length = 1226
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 34/115 (29%), Gaps = 2/115 (1%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P + AP ++ Q+P N ++ + + Q V
Sbjct: 93 PAPRINVSTAAPQTNSVASLPNATQAPRPVQQNPAPGPVQQNPAIRGAQGLPGALPNPQV 152
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+P + + +++ + + + + P++ ++ S A
Sbjct: 153 -RPPQPPNANAMSPAHGQGVASRPP-MGSGPTGLNHTSSTTPSLATDWFSGKRSA 205
>gi|121710450|ref|XP_001272841.1| histone deacetylase RpdA [Aspergillus clavatus NRRL 1]
gi|119400991|gb|EAW11415.1| histone deacetylase RpdA [Aspergillus clavatus NRRL 1]
Length = 689
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 3/122 (2%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+++ P E AP +E + T + + + ++
Sbjct: 512 TDIAPTPSAAEPAPSADEK-AVVESTEMAIDEPEETAASAVASRQPSPKMHDEDTTMEDA 570
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE--VPAMDKNFCSNASGAR 172
P S P++E + + + PA + S +
Sbjct: 571 GEPVPEPEQSKQPEPSVETQEEEAKPETSAPETTATEPSPSAKISPASKETDASEKPETK 630
Query: 173 IA 174
+A
Sbjct: 631 VA 632
>gi|327355996|gb|EGE84853.1| C6 transcription factor [Ajellomyces dermatitidis ATCC 18188]
Length = 1003
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 14/112 (12%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P + + P +P + + + +
Sbjct: 848 PPPSLTSPGSYASSTPSTTAPPTNPQQLPAPS--------------NRLQPLQPWITSRQ 893
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
P + SLP+I G L + A + + + +
Sbjct: 894 PAPAPYSQSLPSINAAAHHGFPMPPLPGALPFHLNPPRLDAPSRPYSAGSGK 945
>gi|261188608|ref|XP_002620718.1| C6 transcription factor [Ajellomyces dermatitidis SLH14081]
gi|239593076|gb|EEQ75657.1| C6 transcription factor [Ajellomyces dermatitidis SLH14081]
Length = 1003
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 14/112 (12%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P + + P +P + + + +
Sbjct: 848 PPPSLTSPGSYASSTPSTTAPPTNPQQLPAPS--------------NRLQPLQPWITSRQ 893
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
P + SLP+I G L + A + + + +
Sbjct: 894 PAPAPYSQSLPSINAAAHHGFPMPPLPGALPFHLNPPRLDAPSRPYSAGSGK 945
>gi|194221993|ref|XP_001492145.2| PREDICTED: similar to DAZ interacting protein 1 [Equus caballus]
Length = 986
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 34/165 (20%), Gaps = 12/165 (7%)
Query: 13 TPKRKSFY------SQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P+R SQ + L +V +HA
Sbjct: 4 PPERPGRPVPREAGSQEVPSPRGRPLGLVDVVFFGPAGRWAHADRAGTGA----PFASRS 59
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P L PS T + T P ST
Sbjct: 60 QPRALLQQRPGRPDLRPSSPPPGTWPSPTPEGWGGGGFGGGPGRVDGT-APFPDASTGGG 118
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+R GL +++ V + + F +
Sbjct: 119 FASKHGKRRDAGLGAARAAQDSQLPDHPRAV-SFPQPFQKHVYYP 162
>gi|325120653|emb|CBZ56208.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1164
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 37/165 (22%), Gaps = 5/165 (3%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
PL K + + +SRL F + H V + +
Sbjct: 234 APLAKAATLPPAASAPSLSRLASSADSKLFAFDFTYTRSGFHRRVLAPPHPSAATPLTHA 293
Query: 67 APIPLTIP--LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
AP P + P S S + G ++ +S+
Sbjct: 294 APAPRSSPAAPRSSPAAPRSSPAAPRSSLAAPRSSPAAP-RSSPAAPGYLSLSSYPQSSR 352
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
P + + S A F + A
Sbjct: 353 --GAPPADPATLARCSTHSFPQPPGHAPTPHRQLAYAAFFDNAAP 395
>gi|242081295|ref|XP_002445416.1| hypothetical protein SORBIDRAFT_07g016770 [Sorghum bicolor]
gi|241941766|gb|EES14911.1| hypothetical protein SORBIDRAFT_07g016770 [Sorghum bicolor]
Length = 459
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 39/136 (28%), Gaps = 10/136 (7%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
G L++++ P + R+ + IP S T Q +
Sbjct: 126 GGLKMNLVNNSQRTHDPMPSPTTSARKRQKMSQPIPSASVPAPSAMHSQPLTAPMQPSSS 185
Query: 99 SSQHDGQI----------QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKN 148
++ Q G V + P+ + P I + GL +
Sbjct: 186 GAKKAAPPGTKVKKTKAGQKIPGGPAVKSMPSSAGPGGRGPIINRNMSAGLPPEGSQLNP 245
Query: 149 KVGREDTEVPAMDKNF 164
+GR+ D +F
Sbjct: 246 LIGRKVMTRWPDDNSF 261
>gi|189217552|ref|NP_001121237.1| hypothetical protein LOC100158313 [Xenopus laevis]
gi|169642016|gb|AAI60748.1| LOC100158313 protein [Xenopus laevis]
Length = 665
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 38/139 (27%), Gaps = 6/139 (4%)
Query: 41 SIYILISHAFVGTISEMI--PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
S++I A + + + P + P+ P SP+ + +
Sbjct: 213 SVFIPKPSAPMAVAPKPLAPPPVAAKPSGPVSFAPPSPAPHTFSPAPSAPSHTFSPKPVT 272
Query: 99 SSQ-HDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTE- 156
+ + + V P + T + + E+ S + A T
Sbjct: 273 GPTFSPKSAPHTFTPRPSVTYPQKPTEPPAEASQEKLPAAQSSPRVTPAAKHEAPPPTVS 332
Query: 157 --VPAMDKNFCSNASGARI 173
A +F R+
Sbjct: 333 SSARAPGFSFAQQRERPRV 351
>gi|8176554|gb|AAB35488.2| bile salt-dependent lipase [Homo sapiens]
Length = 742
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 23/121 (19%), Gaps = 12/121 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 584 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 640
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
SG P T P + G + VP +
Sbjct: 641 GDSGA----PPVPPTGDSGAPPVPPTGDAGPPPVPPTGDS----GPPPVPPTGDSGAPPV 692
Query: 169 S 169
+
Sbjct: 693 T 693
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 12/117 (10%), Positives = 25/117 (21%), Gaps = 7/117 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G AP +P + P + + +
Sbjct: 628 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDAGPPPVPPTGDSGPPPVPPT 684
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED----TEVPAMDK 162
PT + +P + + V D ++PA+ +
Sbjct: 685 GDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVIR 741
Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 23/128 (17%), Gaps = 15/128 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 595 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 651
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-------EDTEVPAMD 161
SG P T P + G + E VP
Sbjct: 652 GDSGA----PPVPPTGDAGPPPVPPTGDSGPPPVPPTGDSGAPPVTPTGDSETAPVPPTG 707
Query: 162 KNFCSNAS 169
+
Sbjct: 708 DSGAPPVP 715
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 30/130 (23%), Gaps = 16/130 (12%)
Query: 53 TISEMIPYSVIREIAPIPLT-------IPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDG 104
+ + +P + E AP+P T +P + P ++ + S
Sbjct: 566 SEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 625
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDTEVPAMD 161
SG P T P + G V P
Sbjct: 626 VPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGPPPV 681
Query: 162 KNFCSNASGA 171
++
Sbjct: 682 -PPTGDSGAP 690
Score = 36.6 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 14/126 (11%), Positives = 25/126 (19%), Gaps = 12/126 (9%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQ 105
+ +P + E P+P +P + P ++ + S
Sbjct: 556 EATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV 615
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG P T P + G + A
Sbjct: 616 PPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVP 671
Query: 166 SNASGA 171
Sbjct: 672 PTGDSG 677
>gi|317137296|ref|XP_001727625.2| protein stu1 [Aspergillus oryzae RIB40]
Length = 1292
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 16/150 (10%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
LT+P K++ + + Q+ S V + P +ST +
Sbjct: 664 TLTVPSRSALKEAIAAHKKARLA--PAKTLPPRPESAQSSFSETKVSDPPAKSTGRTARA 721
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVS---------GL 180
+ + + ++ R PA + S + A A+ + L
Sbjct: 722 PLSSLSSAPMRPGAKPRRPELAR-----PATADPYSSRKTAATDAVHIDSSPRPRRVANL 776
Query: 181 GISQTGTQRAINLLPANITLAFASNGNSLD 210
G + + T+ L +T+A S
Sbjct: 777 GQAPSSTKSKPKKLDIPMTMAVDPVAPSAS 806
>gi|297281683|ref|XP_002802162.1| PREDICTED: hypothetical protein LOC100428043, partial [Macaca
mulatta]
Length = 1243
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 7/123 (5%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G + P + R L + + T L + + +
Sbjct: 475 GREGSVHPRTAARAPCTPGRPRGLCTPRTAARAPCTPRTAARALHPQDGR-----EGSVH 529
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSK--KELLAKNKVGREDTEVPAMDKNFCSNAS 169
+T P L ++ + L + GRE + P + C+
Sbjct: 530 PRTAARAPCTPGRPRGLRAPQDGREGSVPPGRPRGLRAPQDGREGSAPPGWPRGLCTPRM 589
Query: 170 GAR 172
AR
Sbjct: 590 AAR 592
>gi|239606226|gb|EEQ83213.1| C6 transcription factor [Ajellomyces dermatitidis ER-3]
Length = 977
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 14/112 (12%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P + + P +P + + + +
Sbjct: 822 PPPSLTSPGSYASSTPSTTAPPTNPQQLPAPS--------------NRLQPLQPWITSRQ 867
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
P + SLP+I G L + A + + + +
Sbjct: 868 PAPAPYSQSLPSINAAAHHGFPMPPLPGALPFHLNPPRLDAPSRPYSAGSGK 919
>gi|242080273|ref|XP_002444905.1| hypothetical protein SORBIDRAFT_07g001150 [Sorghum bicolor]
gi|241941255|gb|EES14400.1| hypothetical protein SORBIDRAFT_07g001150 [Sorghum bicolor]
Length = 761
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 43/168 (25%), Gaps = 8/168 (4%)
Query: 6 NHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIRE 65
+ P + P + + + + + S P
Sbjct: 500 SAPFVSRPPGGPQSFPTAVPQ------GPSSVAFPGGASPQSPYPPTPDQMRGPPPAFSP 553
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
+ P +P +I P+ +T +Q + + + D + + VV+ T
Sbjct: 554 VGSTPGMVPPSIASSGPPAPGPASTSGSQAQMAPLRPPLPVMGDFTFRPVVS--PAPTPD 611
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
+ P+ + + + D + R+
Sbjct: 612 FAAPSSQMGIQDRTHPGPFFPPSNQNPNQGFQRPFDGRPMNMMGQPRM 659
>gi|126341726|ref|XP_001380909.1| PREDICTED: similar to eukaryotic translation initiation factor 4
gamma, 1, [Monodelphis domestica]
Length = 1945
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 27/124 (21%), Gaps = 5/124 (4%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR-----DNNTVCNQLKNDSSQHDGQIQ 107
+ P R P P + SP+K ++ +
Sbjct: 502 AETTPTPGQQCRPPRPDNSNTPGSPVCPSSPAKPGIPERPSSHAKCPSSPAKPGSPERPS 561
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ G + KP S P S + + + K S
Sbjct: 562 SPAKGPSSPAKPGSPERPSSPPAKPGSPERPSSPVKGPSSPAKPGSPERPSSPAKLPSSP 621
Query: 168 ASGA 171
A
Sbjct: 622 AKPG 625
>gi|239815726|ref|YP_002944636.1| translation initiation factor IF-2 [Variovorax paradoxus S110]
gi|259491503|sp|C5CLW3|IF2_VARPS RecName: Full=Translation initiation factor IF-2
gi|239802303|gb|ACS19370.1| translation initiation factor IF-2 [Variovorax paradoxus S110]
Length = 984
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 51/153 (33%), Gaps = 26/153 (16%)
Query: 245 KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS 304
V LL+ +R + G+ + GA + + + F D
Sbjct: 494 HVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGM-----------VSFLD--- 539
Query: 305 SPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV----- 359
+P + D+ + D + + K + A+ G I VA+
Sbjct: 540 TPGHEAFTAMRARGAQAT--DIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKIDK 597
Query: 360 --AFDESIE---VISQWLQQEHVRDVSVVPLSC 387
A + ++ V + + +E+ DV VP+S
Sbjct: 598 PDASPDRVKQELVAEEVVPEEYGGDVPFVPVSA 630
>gi|332231829|ref|XP_003265098.1| PREDICTED: proline-rich transmembrane protein 3 [Nomascus
leucogenys]
Length = 977
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 42/138 (30%), Gaps = 16/138 (11%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
+ P P+ P E PSK + + + G ++ + K+++ P
Sbjct: 313 PDTKDSLGPQPMD-PPASEAPDGPSKPEITAMNGADPISPQRVRGAVEAPGTPKSLIPGP 371
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ E + L E GR + PA S +
Sbjct: 372 SDP---GPAANRTESPMGALQPDEAEE--WPGRPQSHPPAPPVQAPSTSRR--------- 417
Query: 180 LGISQTGTQRAINLLPAN 197
G+ + TQRA+ P
Sbjct: 418 -GLIRVTTQRALGQPPPP 434
>gi|169622956|ref|XP_001804886.1| hypothetical protein SNOG_14703 [Phaeosphaeria nodorum SN15]
gi|111056775|gb|EAT77895.1| hypothetical protein SNOG_14703 [Phaeosphaeria nodorum SN15]
Length = 737
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 64/201 (31%), Gaps = 18/201 (8%)
Query: 49 AFVGTISEMIPYSVIREIAPIPL------TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQH 102
A + +S + V E AP+P+ T+P + ++ + ++++ +
Sbjct: 131 APIQNLSTALQEQVAEETAPVPIGEDVSQTVPPSSAGDEAGRDTTQDREPAFVRDEPTTS 190
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
+ +D ++ P ST I P+ R L +N
Sbjct: 191 QIRKPDDADLPHAIDAPLSSTVIKDEPSGTPRESTPAITASLERQNSAAENMDSDTLKAL 250
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQE 222
A LG+ T + LP+ + + A S R + ++
Sbjct: 251 EIAKQA----------DLGLRTKRTASVADSLPSPVD-SKAPMLPSKKRPAPASATVKKK 299
Query: 223 AILQIPMQAFDESYNEDDSYT 243
+ + M+ + + + T
Sbjct: 300 GMAKT-MKPSKKRKLDPEDPT 319
>gi|49246227|gb|AAT58249.1| PMEL17 protein [Gallus gallus]
Length = 759
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 288 FAARLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 343
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 344 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVADAAAGTDPT 403
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 404 ADPLPPTSVSSGGDAP 419
>gi|27769331|gb|AAH42510.1| CEL protein [Homo sapiens]
Length = 722
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 23/108 (21%), Gaps = 6/108 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G AP +P + P ++ + +
Sbjct: 619 PTGDSGAPPVPPTGDSGAPP---VPPTGDAGPPPVPPTGDSGAPPVP-PTGDSGAPPV-T 673
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+G + P T P + + +K + +
Sbjct: 674 PTGDS-ETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVI 720
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 23/122 (18%), Gaps = 14/122 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK--NDSSQHDGQIQ 107
G AP +P + P ++ + DS
Sbjct: 586 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 642
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
D P T P + G ++ VP +
Sbjct: 643 GDAGPP-----PVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETA----PVPPTGDSGAPP 693
Query: 168 AS 169
Sbjct: 694 VP 695
>gi|268574670|ref|XP_002642314.1| C. briggsae CBR-KLP-7 protein [Caenorhabditis briggsae]
Length = 696
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 27/109 (24%), Gaps = 7/109 (6%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI---QNDISGKTVVNKPTRST 123
AP P P+ SP+++ T + ++VV P
Sbjct: 123 APSPTEKPVPARRAPSPTEKPAPTRRAASPKAERFAVPAPPKTTRSTANQSVVAAPPAPV 182
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ R + A V P+ S + R
Sbjct: 183 EV----PKLSRRSVAPQPVAAPAPPPVIMNAPRAPSPVARVPSPKNVPR 227
>gi|66774219|sp|Q98917|PMEL_CHICK RecName: Full=Melanocyte protein PMEL; AltName: Full=115 kDa
melanosomal matrix protein; AltName: Full=Melanocyte
protein Pmel 17; AltName: Full=Premelanosome protein;
AltName: Full=Silver locus protein homolog; Flags:
Precursor
gi|49246225|gb|AAT58248.1| PMEL17 protein [Gallus gallus]
Length = 763
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 292 FAARLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 347
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 348 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVADAAAGTDPT 407
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 408 ADPLPPTSVSSGGDAP 423
>gi|55925599|ref|NP_990443.2| melanocyte protein PMEL precursor [Gallus gallus]
gi|55785717|dbj|BAA13589.2| 115-kDa melanosomal matrix protein [Gallus gallus]
Length = 763
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 292 FAARLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 347
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 348 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVADAAAGTDPT 407
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 408 ADPLPPTSVSSGGDAP 423
>gi|329888099|ref|ZP_08266697.1| acetyltransferase GNAT family protein [Brevundimonas diminuta ATCC
11568]
gi|328846655|gb|EGF96217.1| acetyltransferase GNAT family protein [Brevundimonas diminuta ATCC
11568]
Length = 171
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 316 KLNLPYMVADL--YLDDQVDRDKIREKLKGLEE---IARTTGQAIGVAVAFDESI 365
+PY ADL +LD + + I +KL +A G+ + A A ++
Sbjct: 28 GFGIPYPTADLTMFLDASFNAEAITKKLAEPGAAWWVAEREGELLAFANAGPNTL 82
>gi|283853541|ref|ZP_06370781.1| serine/threonine protein kinase [Desulfovibrio sp. FW1012B]
gi|283571080|gb|EFC19100.1| serine/threonine protein kinase [Desulfovibrio sp. FW1012B]
Length = 654
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 15/141 (10%), Positives = 42/141 (29%), Gaps = 11/141 (7%)
Query: 10 RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPI 69
R+ P R +++ + + G +Y + I + + + +
Sbjct: 297 RQAAPHRTAWFVSAV-------VLAVLFGGGLLYHFLWQMPSRQIGQEAVNTEMTAPSST 349
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
P P + ++P+ Q + + +G T + P + P
Sbjct: 350 PPAAPQSPSTAEAPAGHHPGEAAPQPPLAPGETPPPRFSGRNGSTFLMVP----GGEISP 405
Query: 130 TIEERLILGLSKKELLAKNKV 150
++ L + + ++
Sbjct: 406 GVDGAPDTVLVPSFYMQETQI 426
>gi|198457595|ref|XP_002138422.1| GA24403 [Drosophila pseudoobscura pseudoobscura]
gi|198136036|gb|EDY68980.1| GA24403 [Drosophila pseudoobscura pseudoobscura]
Length = 372
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 25/113 (22%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
I + AP +PS +T S+ + +
Sbjct: 228 PISTASPSTPAPSTAAPSTPAPSTAAPSTPAPSTAAPSTAAPSTAAPSTPAPSTAAPSTP 287
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
T + S + T + A T P+ +N
Sbjct: 288 APSTPAPSTAAPSTPAPSTAAPSTPVPSTAAPSTADPSTPAPSTADPLPTNGP 340
>gi|158333336|ref|YP_001514508.1| hypothetical protein AM1_0106 [Acaryochloris marina MBIC11017]
gi|158303577|gb|ABW25194.1| hypothetical protein AM1_0106 [Acaryochloris marina MBIC11017]
Length = 1743
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 4/158 (2%)
Query: 14 PKRKSFYSQIISRLGLFLLFCTFIVGLSIY--ILISHAFVGTISEMIPYSVIR-EIAPIP 70
+R+ ++ G L + GLS I + + + P R E PI
Sbjct: 2 ARRRILDPRLFPNWGQALTLSVLMAGLSPLSTIAKPTTLISPLGQPTPSKTERIEPEPIS 61
Query: 71 LTIPLNIEDKQSPSKRDNNTVC-NQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
+ I + + T + L+ND + Q S + +P+ + +
Sbjct: 62 VQITPIGDLDLALKLPPIPTTTRSSLQNDPAHPPLTPQEKPSESHSIPEPSITDLPNPPL 121
Query: 130 TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
T+ E + S+ ++ V + + S+
Sbjct: 122 TLAEAGWVPNSQTVPVSSIPVTPPTAQASPIAPPQASS 159
>gi|49246221|gb|AAT58246.1| PMEL17 protein [Gallus gallus]
Length = 760
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 292 FAARLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 347
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 348 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVADAAAGTDPT 407
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 408 ADPLPPTSVSSGGDAP 423
>gi|238024565|ref|YP_002908797.1| response regulator receiver [Burkholderia glumae BGR1]
gi|237879230|gb|ACR31562.1| Response regulator receiver [Burkholderia glumae BGR1]
Length = 604
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 87/289 (30%), Gaps = 30/289 (10%)
Query: 8 PLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIA 67
PLR K ++ ++ I GL + ++ + LI +A T+ I +V E A
Sbjct: 321 PLRGKVAAKRITITRRIEPAGLAIRSDRTLLRQVLSNLIENAVKYTLGGSIEVAVTLEDA 380
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK--PTRSTSI 125
+ +K+ + + + G VV + T +
Sbjct: 381 RGQQARIAVRDTGAGIAKQHLPKIFEPFYRANDPGGPSVDGIGMGLAVVREIVTTLRGRV 440
Query: 126 DSLPTI-EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQ 184
+ + E + E+ + G EVPA + A A+V+ ++
Sbjct: 441 EVRSVVGEGSEFVVTLPVEVPGADPAGNAAAEVPA---PPLALARRGWRALVIDDNDNAR 497
Query: 185 TGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTL 244
++ L ++ L D + ++ +L + +
Sbjct: 498 ETLGAMLSALGIDVDL----CDTGQDGIARAGTRRYHLVMLDLEL--------------- 538
Query: 245 KVTQTVQQLLNRLRYSLRRGTGY----FGVMNYRGAMLLSNKESAEVIF 289
+ ++ R+R G GV Y A L + +
Sbjct: 539 -PDLSGFEVARRIRALAEPDGGARPALLGVSAYESAALDEQRHVFDAFL 586
>gi|225424679|ref|XP_002264457.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 958
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 12/113 (10%)
Query: 62 VIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTR 121
+R AP+P P + + P
Sbjct: 145 ALRPYAPVPNGYPAIPAPGPQGAVPPPGVPRYPSPYATMVRPAFP------------PRP 192
Query: 122 STSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+I LP + + G+ + V V A + + +IA
Sbjct: 193 PGAIGMLPALSRPPVPGMPGVRPIMPPVVRPAIVPVAAPTEKPQTTVYVGKIA 245
>gi|33592927|ref|NP_880571.1| filamentous hemagglutinin/adhesin [Bordetella pertussis Tohama I]
gi|34978353|sp|P12255|FHAB_BORPE RecName: Full=Filamentous hemagglutinin
gi|33572575|emb|CAE42162.1| filamentous hemagglutinin/adhesin [Bordetella pertussis Tohama I]
gi|332382339|gb|AEE67186.1| filamentous hemagglutinin/adhesin [Bordetella pertussis CS]
Length = 3590
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 20/202 (9%), Positives = 52/202 (25%), Gaps = 27/202 (13%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIE-------DKQSPSKRDNNTVCNQLKNDSSQHDG 104
G+ + S+ ++ P+ P P+ ++ +
Sbjct: 3258 GSEFSVAGKSLKKKNQVRPVETPTPDVVDGPPSRPTTPPASPQPIRATVEVSSPPPVSVA 3317
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--GREDTEVPAMDK 162
++ K +P + + + ++K E++ + KV + P + +
Sbjct: 3318 TVEVVPRPKVETAQPLPPRPVAAQVVPVTPPKVEVAKVEVVPRPKVETAQPLPPRPVVAE 3377
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA-FASNGNSLDRWMKEAKKKGQ 221
+ A ++A V Q LP + +A + +
Sbjct: 3378 KVTTPAVQPQLAKV----ETVQPVKPETTKPLPKPLPVAKVTKAPPPVVETAQ------- 3426
Query: 222 EAILQIPMQAFDESYNEDDSYT 243
P+
Sbjct: 3427 ------PLPPVKPQKATPGPVA 3442
>gi|326431963|gb|EGD77533.1| hypothetical protein PTSG_12763 [Salpingoeca sp. ATCC 50818]
Length = 1409
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 8/101 (7%), Positives = 21/101 (20%), Gaps = 6/101 (5%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQH---DGQIQNDISGKTVVN 117
+ + P Q P+ + + + + V
Sbjct: 149 PPTMQPPQSSMAAPPPTSMAQPPAGPPTSAPPARTASAGGRRRQYPTTPYGMTQPAAV-- 206
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
P + + P + + + + G P
Sbjct: 207 -PPTQPPVSTQPYGGQGVQQPAAVPPTQPPTRPGMVQPPPP 246
>gi|189204924|ref|XP_001938797.1| extracellular serine-threonine rich protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985896|gb|EDU51384.1| extracellular serine-threonine rich protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 671
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 31/121 (25%), Gaps = 5/121 (4%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI-- 110
T + A P SP+ N++ + + I
Sbjct: 241 TGGYPSSTPEAKTSAYKTTETPSKSVPVSSPAPFGNSSAPAYTPQVPASVVVSSSSSIVT 300
Query: 111 ---SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
TV P +S++ S P G E ++ V T P + +
Sbjct: 301 PKPESSTVATYPAKSSTPASKPVALSSAAAGCGYGESCGESSVASSSTMTPEAATSSAAP 360
Query: 168 A 168
Sbjct: 361 K 361
>gi|170094236|ref|XP_001878339.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646793|gb|EDR11038.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 476
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 32/122 (26%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
A G I PYS + + P P+ + V + +
Sbjct: 120 APTGAIGGPAPYSPLPTNSNAPTDPKTQGGPVTPPASLTISIVNSPAPTGAQGGPTTYSQ 179
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+G + P + SLP I G+ + + G P +
Sbjct: 180 PPTGGNALGGPLPPLASSSLPPINGPAPTGIQGGPVTSSPPTGSNTPTDPKFQGGPVAPP 239
Query: 169 SG 170
+
Sbjct: 240 AS 241
>gi|29501|emb|CAA38325.1| unnamed protein product [Homo sapiens]
gi|180244|gb|AAA51973.1| carboxyl ester lipase [Homo sapiens]
gi|3320604|gb|AAC26514.1| carboxyl ester lipase [Homo sapiens]
gi|119608439|gb|EAW88033.1| carboxyl ester lipase (bile salt-stimulated lipase), isoform CRA_d
[Homo sapiens]
gi|227344|prf||1702227A bile salt stimulated milk lipase
Length = 745
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 23/128 (17%), Gaps = 15/128 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 598 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 654
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-------EDTEVPAMD 161
SG P T P + G + E VP
Sbjct: 655 GDSGA----PPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTG 710
Query: 162 KNFCSNAS 169
+
Sbjct: 711 DSGAPPVP 718
Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 23/108 (21%), Gaps = 6/108 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G AP +P + P ++ + +
Sbjct: 642 PTGDSGAPPVPPTGDSGAPP---VPPTGDAGPPPVPPTGDSGAPPVP-PTGDSGAPPV-T 696
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+G + P T P + + +K + +
Sbjct: 697 PTGDS-ETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVI 743
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 27/128 (21%), Gaps = 14/128 (10%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQ 105
+ +P + E P+P +P + P ++ + S
Sbjct: 559 EATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV 618
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED--TEVPAMDKN 163
SG P T P + G + +
Sbjct: 619 PPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVP 674
Query: 164 FCSNASGA 171
++
Sbjct: 675 PTGDSGAP 682
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 14/129 (10%)
Query: 53 TISEMIPYSVIREIAPIPLT-------IPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDG 104
+ + +P + E AP+P T +P + P ++ + S
Sbjct: 569 SEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 628
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
SG P T P + G + A
Sbjct: 629 VPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPV 684
Query: 163 NFCSNASGA 171
++
Sbjct: 685 PPTGDSGAP 693
Score = 36.6 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 24/129 (18%), Gaps = 17/129 (13%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK--NDSSQHDGQIQ 107
G AP +P + P ++ + DS
Sbjct: 609 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 665
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-------EVPAM 160
D P T P + G ++ VP
Sbjct: 666 GDAGPP-----PVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPT 720
Query: 161 DKNFCSNAS 169
+ +
Sbjct: 721 GDSEAAPVP 729
>gi|254774101|ref|ZP_05215617.1| carbohydrate degrading enzyme [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 291
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 306 PRNLTRVLAPKLNLPYMVADLY-LD--DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
+ R A +L L ++ D+ D + + R L G + +
Sbjct: 148 SNPVVRQTAGQLGLAEILWDVIPFDWANDSNTAATRYMLMTYI----KPGSVVLFHNTYS 203
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+++++ Q++ +V +S L +P S
Sbjct: 204 STVDLVYQFIPVLKANGYRLVTVSELLGPRAPGS 237
>gi|238506094|ref|XP_002384249.1| chitin synthase activator (Chs3), putative [Aspergillus flavus
NRRL3357]
gi|317151047|ref|XP_001824410.2| chitin synthase activator (Chs3) [Aspergillus oryzae RIB40]
gi|220690363|gb|EED46713.1| chitin synthase activator (Chs3), putative [Aspergillus flavus
NRRL3357]
Length = 740
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 46/184 (25%), Gaps = 22/184 (11%)
Query: 1 MSIDLNHPLRKKTPKRKSFY-------------SQIISRLGLFLLFCTFIVGLSIYILIS 47
MS+ N P P R + S G+ T +
Sbjct: 529 MSLSDNTPPSAPYPDRPPSRARPVYPPGYSVPDPRPSSAFGINPNIRTSAPNYNRAASYG 588
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS-----QH 102
+G S A P +P + N+ +L + +
Sbjct: 589 PGPMGYRSPAPVTPTTSGPASPTSATPKLDIGYSAPIESPNSRRPQRLDSTPPDRRPVRT 648
Query: 103 DGQIQNDISGK----TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
Q G T + T +S+P L + K A V ++ P
Sbjct: 649 PVSAQGGPVGSPKPVTSPSSATFPQRSESMPPPSAPLASSTTPKPSSASASVSQKPAAQP 708
Query: 159 AMDK 162
A +
Sbjct: 709 AKSQ 712
>gi|325116912|emb|CBZ52465.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 580
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 31/121 (25%), Gaps = 9/121 (7%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSP-----SKRDNNTVCNQLKNDSSQH 102
+A + E AP T E +P S + + N +
Sbjct: 458 NAPSASTEEPAAEPSATPNAPAASTEEPAAEPSATPNAPAASTEEPAAEPSATPNAPAAS 517
Query: 103 DGQI--QNDISGKTVVNKPTRS--TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
+ + + P + P ++ + + + + K +P
Sbjct: 518 TEEPAAEPSATPNATATSPVEGENKLGTAAPANDKEVAATQDQGDDVKKPAEDTAADGLP 577
Query: 159 A 159
A
Sbjct: 578 A 578
>gi|187150|gb|AAA63211.1| bile salt-activated lipase [Homo sapiens]
gi|228133|prf||1717328A carboxyl ester lipase
Length = 742
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 23/128 (17%), Gaps = 15/128 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 595 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 651
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-------EDTEVPAMD 161
SG P T P + G + E VP
Sbjct: 652 GDSGA----PPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTG 707
Query: 162 KNFCSNAS 169
+
Sbjct: 708 DSGAPPVP 715
Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 23/108 (21%), Gaps = 6/108 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G AP +P + P ++ + +
Sbjct: 639 PTGDSGAPPVPPTGDSGAPP---VPPTGDAGPPPVPPTGDSGAPPVP-PTGDSGAPPV-T 693
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+G + P T P + + +K + +
Sbjct: 694 PTGDS-ETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVI 740
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 27/128 (21%), Gaps = 14/128 (10%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQ 105
+ +P + E P+P +P + P ++ + S
Sbjct: 556 EATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV 615
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED--TEVPAMDKN 163
SG P T P + G + +
Sbjct: 616 PPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVP 671
Query: 164 FCSNASGA 171
++
Sbjct: 672 PTGDSGAP 679
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 14/129 (10%)
Query: 53 TISEMIPYSVIREIAPIPLT-------IPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDG 104
+ + +P + E AP+P T +P + P ++ + S
Sbjct: 566 SEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 625
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAK--NKVGREDTEVPAMDK 162
SG P T P + G + A
Sbjct: 626 VPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPV 681
Query: 163 NFCSNASGA 171
++
Sbjct: 682 PPTGDSGAP 690
Score = 36.6 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 24/129 (18%), Gaps = 17/129 (13%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK--NDSSQHDGQIQ 107
G AP +P + P ++ + DS
Sbjct: 606 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 662
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-------EVPAM 160
D P T P + G ++ VP
Sbjct: 663 GDAGPP-----PVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPT 717
Query: 161 DKNFCSNAS 169
+ +
Sbjct: 718 GDSEAAPVP 726
>gi|149210777|ref|XP_001522763.1| hypothetical protein MGCH7_ch7g861 [Magnaporthe oryzae 70-15]
gi|86196816|gb|EAQ71454.1| hypothetical protein MGCH7_ch7g861 [Magnaporthe oryzae 70-15]
Length = 589
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 32/122 (26%), Gaps = 6/122 (4%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P S ++ + P + K + +Q ++S ++ +
Sbjct: 187 PKPTSSVKTSSQPPKVTTTSQPPKATTESSKPPKETSQPPKETSSLPPKVTTTSQPPQIT 246
Query: 117 NKPTRSTSIDSLPTIEERLI------LGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ + + ++ K+ ++ G VP ++
Sbjct: 247 SASSLPPKDTTSQPPKDTSSKPPKDTTSQPPKDTTSQPPKGTGSASVPPPQGTASNSVPP 306
Query: 171 AR 172
+
Sbjct: 307 PQ 308
Score = 37.7 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 5/120 (4%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQ--HDGQIQNDIS 111
+ +P V P +T ++ K + S+ +T K+ +SQ D Q
Sbjct: 228 ETSSLPPKVTTTSQPPQITSASSLPPKDTTSQPPKDTSSKPPKDTTSQPPKDTTSQPPKG 287
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV---PAMDKNFCSNA 168
+ P + T+ +S+P + + + A N V + T P D A
Sbjct: 288 TGSASVPPPQGTASNSVPPPQGTASNSVPPPQGTASNSVPPQGTASASQPPKDTVSQPPA 347
>gi|296217683|ref|XP_002755054.1| PREDICTED: otogelin [Callithrix jacchus]
Length = 2852
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 59/216 (27%), Gaps = 34/216 (15%)
Query: 58 IPYSVIREIAPIPLTIPLNIE---DKQSPSKRDNNTVCNQLKNDS-SQHDGQIQNDISGK 113
+ +P P + + T L + +
Sbjct: 1776 ATPPAAQMFSPALPLTPAAVSQTHPPAHTAPPAAGTAPGLLLGATLPTSGVLAVAEGVAS 1835
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
TV P +ST+ + L +S + + G +PA + +
Sbjct: 1836 TVSIAPRKSTTGKAA-----ILSKQVSPPTSIYDSAQGGPMDLMPASSQPLAPLVTEP-- 1888
Query: 174 AIVVSGLGISQTGTQRAINLLPANITLAFAS-NGNSLDRWM------KEAKKKGQEAILQ 226
G Q GT LP + + + + R + A+ G A
Sbjct: 1889 -------GGPQAGT-----ALPVPTSYPLSPVSARTAPRESALVLLPQLAEAHGTSAGAH 1936
Query: 227 IPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLR 262
P + D++ E T + Q ++ L +L
Sbjct: 1937 PPAEPVDKATTE----TSGRSAPAQSVVEGLAQALA 1968
>gi|118463310|ref|YP_880464.1| carbohydrate degrading enzyme [Mycobacterium avium 104]
gi|118164597|gb|ABK65494.1| carbohydrate degrading enzyme [Mycobacterium avium 104]
Length = 291
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 306 PRNLTRVLAPKLNLPYMVADLY-LD--DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
+ R A +L L ++ D+ D + + R L G + +
Sbjct: 148 SNPVVRQTAGQLGLAEILWDVIPFDWANDSNTAATRYMLMTYI----KPGSVVLFHNTYS 203
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+++++ Q++ +V +S L +P S
Sbjct: 204 STVDLVYQFIPVLKANGYRLVTVSELLGPRAPGS 237
>gi|296204397|ref|XP_002806949.1| PREDICTED: LOW QUALITY PROTEIN: titin-like [Callithrix jacchus]
Length = 34170
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 34/124 (27%), Gaps = 3/124 (2%)
Query: 50 FVGTISEMIPYSVIREIAPIPL-TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
V + +P RE P + +P E+K + + +
Sbjct: 10712 PVPEEKKPVPVPKKREAPPAKVPEVPKKPEEKLPVLIPKKEKAPPAKVPEVPKKPVPEEK 10771
Query: 109 DISGK--TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
V P + + P E+++ + KK KV ++ +K
Sbjct: 10772 VPVPAPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTP 10831
Query: 167 NASG 170
Sbjct: 10832 VPKK 10835
>gi|187733496|ref|YP_001879179.1| DNA polymerase III subunits gamma and tau [Shigella boydii CDC
3083-94]
gi|187430488|gb|ACD09762.1| DNA polymerase III, tau subunit [Shigella boydii CDC 3083-94]
Length = 643
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 4/108 (3%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND--ISGKTVVNKPTRST 123
+AP + P + P L +SQ Q + G T K +
Sbjct: 378 VAPTAVMTP--TQVPPQPQSAPQKAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAA 435
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ + P L S + + V + PA + + A+
Sbjct: 436 ATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTP 483
>gi|325695189|gb|EGD37090.1| subtilisin family serine protease [Streptococcus sanguinis SK150]
Length = 1506
Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 39/139 (28%), Gaps = 14/139 (10%)
Query: 54 ISEMIPYSVIREIAPIPL-TIPLNIEDKQSPSKRDNNTVCNQLKNDSS-----QHDGQIQ 107
++ I + + + AP ++ + E PS + + + +
Sbjct: 65 ETQPISPASVEKAAPASSESVASSTEQASQPSTAEAKEASAAPVEKGATSSSEEASSSAE 124
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA-------M 160
KPT S SK + +A++ ++ +
Sbjct: 125 KVTQPSATETKPTAPASPTVESPAAANSDKPASKPDAVAESPTSQDAKPSSISTNEIIKV 184
Query: 161 DKNFCSNASG-ARIAIVVS 178
+ + G R+ ++
Sbjct: 185 PQTWSQGYKGQGRVVAIID 203
>gi|320103865|ref|YP_004179456.1| hypothetical protein Isop_2329 [Isosphaera pallida ATCC 43644]
gi|319751147|gb|ADV62907.1| hypothetical protein Isop_2329 [Isosphaera pallida ATCC 43644]
Length = 1144
Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 30/130 (23%), Gaps = 5/130 (3%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS---PSKRDNNTVCNQLKND--SSQH 102
+A P P PL I + + + +
Sbjct: 154 NAVQDESPTATPTPREAVAPDQPEATPLPIPTPPNGATAPEPTPGAILDNPPRALIDPDD 213
Query: 103 DGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
ND V P S + S + L A + ED E D+
Sbjct: 214 PATSSNDAPIAVPVVGPADSRRVSSSHPASIAVFGLGDGILLPADRAMSLEDYERAVTDQ 273
Query: 163 NFCSNASGAR 172
A AR
Sbjct: 274 RIAQIARMAR 283
>gi|85059086|ref|YP_454788.1| cell division protein [Sodalis glossinidius str. 'morsitans']
gi|84779606|dbj|BAE74383.1| cell division protein [Sodalis glossinidius str. 'morsitans']
Length = 1155
Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 3/125 (2%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
A G +E P + A P Q+P++ + +
Sbjct: 255 AQAGQGAEASPLAGQGATAYPAGERP--DSHAQNPAQAGAPSGAGGPLSAGVLSATVPGQ 312
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
++G + + + E LS + E PA + +
Sbjct: 313 GVAGDPLAAGAGVNYPPEGAWA-ESASPASLSPAQAGEVPHYRFELPGAPASPQALAAEE 371
Query: 169 SGARI 173
G R+
Sbjct: 372 EGPRL 376
>gi|144048|gb|AAA22974.1| filamentous hemagglutinin [Bordetella pertussis]
Length = 3591
Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 20/202 (9%), Positives = 52/202 (25%), Gaps = 27/202 (13%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIE-------DKQSPSKRDNNTVCNQLKNDSSQHDG 104
G+ + S+ ++ P+ P P+ ++ +
Sbjct: 3258 GSEFSVAGKSLKKKNQVRPVETPTPDVVDGPPSRPTTPPASPQPIRATVEVSSPPPVSVA 3317
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKV--GREDTEVPAMDK 162
++ K +P + + + ++K E++ + KV + P + +
Sbjct: 3318 TVEVVPRPKVETAQPLPPRPVAAQVVPVTPPKVEVAKVEVVPRPKVETAQPLPPRPVVAE 3377
Query: 163 NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLA-FASNGNSLDRWMKEAKKKGQ 221
+ A ++A V Q LP + +A + +
Sbjct: 3378 KVTTPAVQPQLAKV----ETVQPVKPETTKPLPKPLPVAKVTKAPPPVVETAQ------- 3426
Query: 222 EAILQIPMQAFDESYNEDDSYT 243
P+
Sbjct: 3427 ------PLPPVKPQKATPGPVA 3442
>gi|124053388|sp|Q2UCC9|STU1_ASPOR RecName: Full=Protein stu1
Length = 1184
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 45/166 (27%), Gaps = 14/166 (8%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK 113
+ + + T+ + + + Q+ S
Sbjct: 565 EKDPANPNRDQSSYLSSDTLTVPSRSALKEAIAAHKKARLAPAKTLPPRPESAQSSFSET 624
Query: 114 TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
V + P +ST + + + + ++ R PA + S + A
Sbjct: 625 KVSDPPAKSTGRTARAPLSSLSSAPMRPGAKPRRPELAR-----PATADPYSSRKTAATD 679
Query: 174 AIVVS---------GLGISQTGTQRAINLLPANITLAFASNGNSLD 210
A+ + LG + + T+ L +T+A S
Sbjct: 680 AVHIDSSPRPRRVANLGQAPSSTKSKPKKLDIPMTMAVDPVAPSAS 725
>gi|126343760|ref|XP_001380245.1| PREDICTED: similar to alpha-NAC, muscle-specific form gp220
[Monodelphis domestica]
Length = 1027
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 36/161 (22%), Gaps = 4/161 (2%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
PK I + + + +S A G S AP
Sbjct: 325 AAPKDTPTAPASIPLTPTVTSDSSSVATSPLEATVSPAPKG--LPTKKGSATSPAAPKDT 382
Query: 72 TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS-GKTVVNKPTRSTSIDSLPT 130
P ++ + K S+ + + + + + PT
Sbjct: 383 PTPPASSPLEATVSPPAP-KGSPTKKGSATSPAAPKGTPTPPASPLEATVPPPAPKGSPT 441
Query: 131 IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ + K E T P K + A
Sbjct: 442 KKGSATSSAAPKGTPTPPASPLEATVSPPAPKGSPTKKGSA 482
>gi|34496761|ref|NP_900976.1| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
[Chromobacterium violaceum ATCC 12472]
gi|34102616|gb|AAQ58981.1| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
[Chromobacterium violaceum ATCC 12472]
Length = 193
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 313 LAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWL 372
LA KL +LD D+ + L L ++ RT G + + + +I + +W+
Sbjct: 57 LARKLGQTSAFG-AFLDPVADKLIVAAALILLVQLGRTEGWMAMIIIGREITISALREWM 115
Query: 373 QQEHVR-DVSVVPLSCL 388
R V+V + L
Sbjct: 116 AGMGSRSSVAVAYIGKL 132
>gi|297702120|ref|XP_002828039.1| PREDICTED: hypothetical protein LOC100432964 [Pongo abelii]
Length = 620
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 73/281 (25%), Gaps = 35/281 (12%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ P AP+PL P + + + D
Sbjct: 15 PTAPVPLSSPPGRSIPTAPVPLDYPPPGSCIPTAPVPLGSPPGRSIPTAPVPLDYPPPGR 74
Query: 110 ISGKTVV--NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
V + P +SI + P + G S + +P
Sbjct: 75 SIPTAPVPLDYPPPGSSIPTAPVPLDYPPPGSSIPTAPVPLDYPPPGSSIPTAPVPLDYP 134
Query: 168 ASGARI--AIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAIL 225
G I A V+ L G+ +P A ++ G + + A I+
Sbjct: 135 PPGRSIPTAPVL--LDYPPPGSSIPTAPVPLGSPPALSAQGPDIILLLSTASGARGPDII 192
Query: 226 QIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRY--------------------SLRRGT 265
+ A TL + Q + + S +
Sbjct: 193 LLLSTASAYQM----PGTLDIILLYQHIRCLGPWTSSFFVRISSARDPGHHPSVSAHQVP 248
Query: 266 GYFGVMNYRGAMLLSNKESAEVIFKEFAKR----GLLFFDD 302
G V+ ++ + S++ E + + GLLF DD
Sbjct: 249 GALDVILHQ-HNITSDESVPEWLMGRMVRYSRGGGLLFLDD 288
>gi|302870413|ref|YP_003839050.1| hypothetical protein Micau_5971 [Micromonospora aurantiaca ATCC
27029]
gi|302573272|gb|ADL49474.1| hypothetical protein Micau_5971 [Micromonospora aurantiaca ATCC
27029]
Length = 520
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 39/186 (20%), Gaps = 18/186 (9%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVG------------TI 54
P ++ + + + R + G + S
Sbjct: 190 RPAVEQPTAERPGGERPVPRQSVNGQAAGSDGGPPEWAGRSADPRAFGIVLVVLGLATAG 249
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI---S 111
+ P +V + + + +P + S +G I D
Sbjct: 250 LAVQPGAVQAAPSKPAASACPSKPATPTPGASAPTATPTPSPSASPTREGNIITDFFEGI 309
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSK---KELLAKNKVGREDTEVPAMDKNFCSNA 168
G +S + PT G+ PA
Sbjct: 310 GDLFKGSSKKSETPSPTPTASGSAAPTSKPATRPGSTECPAPGKPGKVDPAKPGKVEPGK 369
Query: 169 SGARIA 174
RIA
Sbjct: 370 PLPRIA 375
>gi|218886457|ref|YP_002435778.1| integral membrane sensor signal transduction histidine kinase
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757411|gb|ACL08310.1| integral membrane sensor signal transduction histidine kinase
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 912
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 28/89 (31%)
Query: 27 LGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR 86
LGL +++ + A +G + V+ + P P P+ D P +
Sbjct: 821 LGLAVVYGLVVDAGGSVTAGDSAELGGAEFTVRLPVVGAVCPTPPAAPVPSADSVPPPRP 880
Query: 87 DNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
+ + S Q S ++
Sbjct: 881 IPDAAPFGPASSSGTGPAADQPANSDASI 909
>gi|67937657|gb|AAY83291.1| polymorphic immunodominant-like protein [Babesia sp. WA1]
Length = 706
Score = 37.7 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 3/115 (2%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
V+ + AP+ T + + +P + Q + Q IQ + V +
Sbjct: 187 PQVMTQTAPVEETQAPVVTESPAPQQPAQVAAPEQPAEVAPQATAGIQQ-AQPQPVATET 245
Query: 120 TRSTSIDSLPTIEERL--ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ + T E ++ S + +V + V + + +
Sbjct: 246 ATAEQPVAATTTEVQMPQAAAESPAPISETPQVMTQTAPVEETQAPVVTESPAPQ 300
Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 31/112 (27%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
V+ + AP+ T + + +P + Q + Q IQ
Sbjct: 276 PQVMTQTAPVEETQAPVVTESPAPQQPAQVAAPEQPAEVAPQATAGIQQAQPQPVAAEAQ 335
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ + T + + + + V + D+ AS A
Sbjct: 336 VVQPPVQTAQTRPVAQPQVVVAEAQVVQPPVKAAQAQPVVKDQAAQPVASVA 387
>gi|156402834|ref|XP_001639795.1| predicted protein [Nematostella vectensis]
gi|156226925|gb|EDO47732.1| predicted protein [Nematostella vectensis]
Length = 638
Score = 37.7 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 32/111 (28%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
VI A P ++ K SP R ++ + + + ++
Sbjct: 426 PVIPAGATNRTGKPPSMAPKPSPGTRPIPGAQPGVRKPTPSPSLSNKEPANPQSDRGPMP 485
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
++ ++P+ R + R T P+ S +S
Sbjct: 486 FPSNRGAMPSPSTRGPTPSPSNRGAVLSPSSRGPTPSPSNRGAVPSPSSRG 536
>gi|301786533|ref|XP_002928681.1| PREDICTED: mitochondrial inner membrane protein-like [Ailuropoda
melanoleuca]
Length = 758
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 49/180 (27%), Gaps = 12/180 (6%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYS----- 61
P R+ + S S L I G +Y F ++ + IPYS
Sbjct: 28 RPCRRYSTSGGSRLSPGKIAGAGLLFVGGGIGGTILYAKWDSHFRESVEKTIPYSDKLFE 87
Query: 62 --VIREIAPIPLTIPLNIEDKQSPSK-----RDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ P+PL S +++ +QL+
Sbjct: 88 MVLGSPPYPVPLPKKPIQSGPLKISSVSEVMKESKQPASQLQKQKGDTPASTTGPTEAAQ 147
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+++ + S+ + E + + K + + AR+A
Sbjct: 148 IISAAGDTPSVPAPAVQHEESVKTEHPGIGEGQPKPAASEEASSTSVRERPPEEVAARLA 207
>gi|293192382|ref|ZP_06609493.1| putative LPXTG-motif protein cell wall anchor domain protein
[Actinomyces odontolyticus F0309]
gi|292820297|gb|EFF79291.1| putative LPXTG-motif protein cell wall anchor domain protein
[Actinomyces odontolyticus F0309]
Length = 641
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR-----DNNTVCNQLKNDSSQ 101
A + + P P +PS D + + N
Sbjct: 485 QQAPSDETPALANGDENPSVGQEPGQTPAPSVPSAAPSAPANGGGDPASEPSAPANGDGN 544
Query: 102 HDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+G P ST D + RL + + + +D P
Sbjct: 545 PSVTPSAPANGDATPAAPETSTPADDQGAVTARLDI-TPSADPTQASVPAAQDASTPTQA 603
Query: 162 KNFCSNASGA 171
+ A+GA
Sbjct: 604 RADALAATGA 613
>gi|161520212|ref|YP_001583639.1| major facilitator transporter [Burkholderia multivorans ATCC 17616]
gi|189353610|ref|YP_001949237.1| multidrug resistance protein [Burkholderia multivorans ATCC 17616]
gi|160344262|gb|ABX17347.1| major facilitator superfamily MFS_1 [Burkholderia multivorans ATCC
17616]
gi|189337632|dbj|BAG46701.1| multidrug resistance protein [Burkholderia multivorans ATCC 17616]
Length = 512
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 7/185 (3%)
Query: 28 GLFLLFCTFI--VGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK 85
G+ + F G ++ + S A + M+P VI I P+ +
Sbjct: 330 GVVIPGGLFTIAAGFALMRIGSAAEHASWLTMLPGCVIAGIGLGLANTPVTNTTTGAVPS 389
Query: 86 RDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELL 145
+ + G +V + I + + L+++
Sbjct: 390 ARAGMASGIDMSARMISLALNIAMM-GFVLVAGIVANLKGGVAAAIGDASLRALAQEIAA 448
Query: 146 AKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASN 205
+ + R + A +V G G + +L +AFA
Sbjct: 449 GRTEDLRAIAPALTQADPTGAALHAA----LVHGFGWVMVYGAAGVAVLATASAIAFAPT 504
Query: 206 GNSLD 210
S+
Sbjct: 505 RRSVA 509
>gi|331999983|ref|NP_001193627.1| breast cancer anti-estrogen resistance protein 1 [Bos taurus]
Length = 846
Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 79/278 (28%), Gaps = 28/278 (10%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI-Q 107
AF + P P + P P D V L+ + +
Sbjct: 308 AFTKAKPFDPTRHPLVLAVPPPDSPPAEDVYDVPPPAPDLYDVPPGLRRPGPGALYDVPR 367
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ V T + S+P ER +K+ L+ + G + A
Sbjct: 368 ERLLPPEVAGSGTADAGVYSVPPAAEREAPADAKR--LSASSTGSTRSSQSASSLEAAVP 425
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ A+ L ++ A + A G +
Sbjct: 426 GREP----------LELEVAVEALARLQQGVSATVA-------HLLDLAGSVGGCGGRRG 468
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P + + + + V V +LL R ++ T + A L + E
Sbjct: 469 PPEPQEPPAVDLRAAVAAVHAAVHELLEFARNAVGNATHTSDRTLH--AKLSRQLQKMED 526
Query: 288 IFKEFAKRGLLFFDD-----GSSPRNLTRVLAPKLNLP 320
+++ G D G++P +L R++A +P
Sbjct: 527 VYQTLVAHGQA-LDSSRGGLGATPEDLDRLVACSRAVP 563
>gi|148536848|ref|NP_001798.2| bile salt-activated lipase precursor [Homo sapiens]
gi|55958210|emb|CAI13412.1| carboxyl ester lipase (bile salt-stimulated lipase) [Homo sapiens]
Length = 756
Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 23/121 (19%), Gaps = 12/121 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 598 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 654
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
SG P T P + G + VP +
Sbjct: 655 GDSGA----PPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAP----PVPPTGDSGAPPV 706
Query: 169 S 169
+
Sbjct: 707 T 707
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 23/128 (17%), Gaps = 15/128 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 609 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 665
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-------EDTEVPAMD 161
SG P T P + G + E VP
Sbjct: 666 GDSGA----PPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTG 721
Query: 162 KNFCSNAS 169
+
Sbjct: 722 DSGAPPVP 729
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 21/121 (17%), Gaps = 12/121 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 587 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 643
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
SG P T P + G VP +
Sbjct: 644 GDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDA----GPPPVPPTGDSGAPPV 695
Query: 169 S 169
Sbjct: 696 P 696
Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 28/127 (22%), Gaps = 12/127 (9%)
Query: 53 TISEMIPYSVIREIAPIPLT-------IPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDG 104
+ + +P + E AP+P T +P + P ++ + S
Sbjct: 569 SEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 628
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
SG P T P + G + A
Sbjct: 629 VPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPV 684
Query: 165 CSNASGA 171
Sbjct: 685 PPTGDSG 691
Score = 37.3 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 23/108 (21%), Gaps = 6/108 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G AP +P + P ++ + +
Sbjct: 653 PTGDSGAPPVPPTGDSGAPP---VPPTGDAGPPPVPPTGDSGAPPVP-PTGDSGAPPV-T 707
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+G + P T P + + +K + +
Sbjct: 708 PTGDS-ETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVI 754
Score = 36.6 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 25/126 (19%), Gaps = 12/126 (9%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQ 105
+ +P + E P+P +P + P ++ + S
Sbjct: 559 EATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV 618
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG P T P + G + +
Sbjct: 619 PPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP 674
Query: 166 SNASGA 171
Sbjct: 675 PTGDAG 680
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 24/129 (18%), Gaps = 17/129 (13%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK--NDSSQHDGQIQ 107
G AP +P + P ++ + DS
Sbjct: 620 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 676
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-------EVPAM 160
D P T P + G ++ VP
Sbjct: 677 GDAGPP-----PVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPT 731
Query: 161 DKNFCSNAS 169
+ +
Sbjct: 732 GDSEAAPVP 740
>gi|13472161|ref|NP_103728.1| serine/threonine kinase [Mesorhizobium loti MAFF303099]
gi|14022906|dbj|BAB49514.1| serine/threonine kinase [Mesorhizobium loti MAFF303099]
Length = 857
Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 41/170 (24%), Gaps = 17/170 (10%)
Query: 13 TPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTI------SEMIPYSVIREI 66
P++ S G + + G + I + +P V+
Sbjct: 356 APRKSSRMPA---VAGGLVTLAVLLGGGLYFSGILAPPPAEEKLKPLTPKPVPKPVVEAP 412
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS-TSI 125
P+ E Q V Q + + I+ + +
Sbjct: 413 KPVA-------ETPQPDESNPPPPVQPQPEPSKPDNAATIETVNPPALPDAQVKPPVPAE 465
Query: 126 DSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
+ P + ++ VG+ + + S A + I
Sbjct: 466 NQAPGVPPATEARQPAEQAPVAPPVGKPASPTVQPETTANSQAQAPPVEI 515
>gi|315501885|ref|YP_004080772.1| hypothetical protein ML5_1081 [Micromonospora sp. L5]
gi|315408504|gb|ADU06621.1| hypothetical protein ML5_1081 [Micromonospora sp. L5]
Length = 427
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 35/128 (27%), Gaps = 5/128 (3%)
Query: 45 LISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG 104
IS GTIS+ I AP L P + + + T
Sbjct: 233 GISPGTAGTISQPAAGPNITHPAPASLGTPPALPPNLPRTGSSSPTGGRPSA-----SPL 287
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
++ +G + T I P + + +++ V +
Sbjct: 288 NPESQRNGSAAAPRATPPGLIGGAPVGGQGQPNRSAPRKVNPVGGVIGGGGAGTSPTGAA 347
Query: 165 CSNASGAR 172
S GAR
Sbjct: 348 GSRPGGAR 355
>gi|251757481|sp|P19835|CEL_HUMAN RecName: Full=Bile salt-activated lipase; Short=BAL; AltName:
Full=Bile salt-stimulated lipase; Short=BSSL; AltName:
Full=Bucelipase; AltName: Full=Carboxyl ester lipase;
AltName: Full=Cholesterol esterase; AltName:
Full=Pancreatic lysophospholipase; AltName: Full=Sterol
esterase; Flags: Precursor
Length = 753
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 23/121 (19%), Gaps = 12/121 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 595 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 651
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
SG P T P + G + VP +
Sbjct: 652 GDSGA----PPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAP----PVPPTGDSGAPPV 703
Query: 169 S 169
+
Sbjct: 704 T 704
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 23/128 (17%), Gaps = 15/128 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 606 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 662
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGR-------EDTEVPAMD 161
SG P T P + G + E VP
Sbjct: 663 GDSGA----PPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTG 718
Query: 162 KNFCSNAS 169
+
Sbjct: 719 DSGAPPVP 726
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 21/121 (17%), Gaps = 12/121 (9%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK-NDSSQHDGQIQN 108
G AP +P + P ++ + S
Sbjct: 584 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 640
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
SG P T P + G VP +
Sbjct: 641 GDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDA----GPPPVPPTGDSGAPPV 692
Query: 169 S 169
Sbjct: 693 P 693
Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 28/127 (22%), Gaps = 12/127 (9%)
Query: 53 TISEMIPYSVIREIAPIPLT-------IPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDG 104
+ + +P + E AP+P T +P + P ++ + S
Sbjct: 566 SEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 625
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
SG P T P + G + A
Sbjct: 626 VPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPV 681
Query: 165 CSNASGA 171
Sbjct: 682 PPTGDSG 688
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 23/108 (21%), Gaps = 6/108 (5%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G AP +P + P ++ + +
Sbjct: 650 PTGDSGAPPVPPTGDSGAPP---VPPTGDAGPPPVPPTGDSGAPPVP-PTGDSGAPPV-T 704
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+G + P T P + + +K + +
Sbjct: 705 PTGDS-ETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMPAVI 751
Score = 36.6 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 25/126 (19%), Gaps = 12/126 (9%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQL-KNDSSQHDGQ 105
+ +P + E P+P +P + P ++ + S
Sbjct: 556 EATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV 615
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
SG P T P + G + +
Sbjct: 616 PPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVP 671
Query: 166 SNASGA 171
Sbjct: 672 PTGDAG 677
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 24/129 (18%), Gaps = 17/129 (13%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK--NDSSQHDGQIQ 107
G AP +P + P ++ + DS
Sbjct: 617 PTGDSGAPPVPPTGDSGAPP---VPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPT 673
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT-------EVPAM 160
D P T P + G ++ VP
Sbjct: 674 GDAGPP-----PVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPT 728
Query: 161 DKNFCSNAS 169
+ +
Sbjct: 729 GDSEAAPVP 737
>gi|240275410|gb|EER38924.1| protein kinase C [Ajellomyces capsulatus H143]
Length = 766
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 41/197 (20%), Gaps = 27/197 (13%)
Query: 50 FVGTISEMIPYSVIREI-APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
G + P + P + SP ++ + SS
Sbjct: 252 PAGESGQKPPDPGYGQPLKPASVEAISAAHSSYSPQSPVASSRQSHPPRGSSNAAAAAAA 311
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLI--LGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+G R S P ER G+ + + G D +
Sbjct: 312 AATG-------MRPPSQPGPPAAYERPGEYPGVRPADQYQTDPRGIADAARQPQQQPPSH 364
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ GT LP L A + + Q
Sbjct: 365 AHYDPS--------AYASIGTYGQAPQLPP---LQVAPPP------AQYGHSQHTPLTSQ 407
Query: 227 IPMQAFDESYNEDDSYT 243
PM A +
Sbjct: 408 PPMSALPMKEPQSGPVA 424
>gi|309810703|ref|ZP_07704511.1| putative acyltransferase [Dermacoccus sp. Ellin185]
gi|308435334|gb|EFP59158.1| putative acyltransferase [Dermacoccus sp. Ellin185]
Length = 630
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 55/202 (27%), Gaps = 20/202 (9%)
Query: 69 IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSL 128
+ P+ + D I D G ++ + S D
Sbjct: 372 VASAAQARTSAPGVPTDVPPLVAGTPAYRTGAHQDAGIVGDSVGSSLAQGFSPSVYTDLS 431
Query: 129 PTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS---NASGARIAIVVSGLGISQT 185
+ + L + + E T + +A + IV
Sbjct: 432 MSDATMIGCDLVPAPISHDGQDVAESTRCASWRAGVEKQLRDAHARTLVIVGD---AHFL 488
Query: 186 GTQRAINLLPANITLAFASNGN-----SLDRWMKEAKKKGQE--AILQIPMQAFDESYNE 238
T R +L A T G +LD W + A+ G E ++ +P + D +
Sbjct: 489 TTHRLDGVLAAPQT----PQGAKSIELALDSWAQRARAAGVERTVVVNLPCRRIDPVRLD 544
Query: 239 DDSYTLKVTQTVQQLLNRLRYS 260
+L+ + ++
Sbjct: 545 P---SLRFFAEQGSNDAAVDWA 563
>gi|293335505|ref|NP_001168682.1| hypothetical protein LOC100382471 [Zea mays]
gi|223950187|gb|ACN29177.1| unknown [Zea mays]
Length = 1100
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 24/129 (18%), Gaps = 6/129 (4%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPL--NIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
A G + P + P P P R + Q
Sbjct: 52 APRGLTPQQAPPAFAALSGPPPAAARPFFPGSPPAPPFVRAPTAAASVSPPFGGQPGVVS 111
Query: 107 QN---DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM-DK 162
Q ++P + + G + +
Sbjct: 112 QQPPPFGGPPGAASQPPPPFGVAPGVVSQAPPPFGGPPTAASQAPPPFGGPPAMASQVPS 171
Query: 163 NFCSNASGA 171
F ++ A
Sbjct: 172 PFVGHSVAA 180
>gi|218195991|gb|EEC78418.1| hypothetical protein OsI_18233 [Oryza sativa Indica Group]
Length = 1227
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 23/172 (13%)
Query: 6 NHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIRE 65
N P R + P R + + S+ ++ A S+M P S R
Sbjct: 1013 NAPSRTRVPLRLFLFPAKKKKP-------------SLLACVNPALQKQHSDMSPISRGR- 1058
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSI 125
+ P + +PS + + ++ +G +
Sbjct: 1059 -----PSTPSSNHRPSTPSSIHRPSTPGATRRSIGGTPSTPRSRNNGVGGGGGGPFKSEP 1113
Query: 126 DSLPTIEERL--ILGLSKKELLAKNKVGR--EDTEVPAMDKNFCSNASGARI 173
+S P+ R S + + +K V R P + AR+
Sbjct: 1114 NSPPSATARPRLSFDRSPRSVDSKPVVERRVPKIGTPPDKQPRKEAELQARL 1165
>gi|308198049|ref|XP_001387039.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149389008|gb|EAZ63016.2| predicted protein [Pichia stipitis CBS 6054]
Length = 386
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 6/94 (6%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDN------NTVCNQLKNDSS 100
++ F +SE PY+ RE P+P N P K + + + +
Sbjct: 4 NNPFAAALSEPDPYAQRREPPPVPRQTNTNRTPPVRPPKPEALPSYEEAAGPDTARREYP 63
Query: 101 QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEER 134
+ + + N+P RS S P R
Sbjct: 64 REKSTSSSSRQHHSTSNRPHRSHSDSGRPPRSSR 97
>gi|91782985|ref|YP_558191.1| condensin subunit ScpB [Burkholderia xenovorans LB400]
gi|91686939|gb|ABE30139.1| condensin subunit ScpB [Burkholderia xenovorans LB400]
Length = 408
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 40/156 (25%), Gaps = 17/156 (10%)
Query: 72 TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTI 131
I D + + + G + + G +P P
Sbjct: 183 AIEFADADTVQAVTPGEDGALEEQVDSGVIEAGAATDTLVGTAATGEPQDIPPTVGEPLQ 242
Query: 132 EERLILGLSKKELLAKNK----------VGREDTEVPAMDKNFCSNASGARIAIVVSGLG 181
+ G + ++ + G P +A A++A V
Sbjct: 243 SDSADAGANSHADGSQPETAGETSGTEIAGELAEAHPKQHAEPVESAHAAKVAEV----- 297
Query: 182 ISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAK 217
T A+ + PA+ + A + + + A
Sbjct: 298 --AKVTDSAVEIAPASGSHPDAPDAPAAQEHAETAH 331
>gi|271962346|ref|YP_003336542.1| ATP-dependent helicase HrpB [Streptosporangium roseum DSM 43021]
gi|270505521|gb|ACZ83799.1| ATP-dependent helicase HrpB [Streptosporangium roseum DSM 43021]
Length = 880
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 35/128 (27%), Gaps = 10/128 (7%)
Query: 57 MIPYSVIREIAPIPLTIPL----NIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
P ++ P P P +P RD + + + + ++G
Sbjct: 507 RTPPPAGQDGRPRPAPAPAGQGGRPRPAPAPGGRDGSAGVSPPPAGRDRGPEPGDDAVAG 566
Query: 113 KTVVNKPTRS--TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
V + L + LA + V D+ S ++
Sbjct: 567 LVVALAYPERVARRRGGSYLMASGTAAELPQGSRLASAEW----LAVAVADRPAGSASAR 622
Query: 171 ARIAIVVS 178
R A+V+
Sbjct: 623 VRQAVVID 630
>gi|238878872|gb|EEQ42510.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1268
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 40/147 (27%), Gaps = 13/147 (8%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS-SQHDGQIQNDISGKTVVNKPTRSTS 124
P P++ P Q PS + + + N + +RSTS
Sbjct: 921 STPTPVSAPAFGSPGQPPSAPSQPGSVGSVSSAGYPKKTFSATNVLPPPP--KSISRSTS 978
Query: 125 IDSLPTIEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
++PT V + ++ P+ + S R+A
Sbjct: 979 RTTVPTSSTVPASPKPTPVSNKYAPAVTSDASQPPSSGFASPTLNSSPRLA--------K 1030
Query: 184 QTGTQRAINLLPANITLAFASNGNSLD 210
LP I+ A + L
Sbjct: 1031 NPYAPSVTEQLPPKISYA-TPPAHHLA 1056
>gi|172038456|ref|YP_001804957.1| hypothetical protein cce_3543 [Cyanothece sp. ATCC 51142]
gi|171699910|gb|ACB52891.1| unknown [Cyanothece sp. ATCC 51142]
Length = 379
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 39/139 (28%), Gaps = 3/139 (2%)
Query: 18 SFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNI 77
+ +L ++ G S IL A+ T S V P+
Sbjct: 172 PGWRFTQRAYNGNVLGHVYLTGDSTAILAQPAYNNTDSSAEAVMVSESDPPVQEQTFTAE 231
Query: 78 EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEE---R 134
PS + + +SQ +V N+P S LP +E +
Sbjct: 232 NPPSVPSYSSQPPRLSPENSLTSQPSRNTLPPPPIPSVSNEPPPLPSFSELPPLEPPTTK 291
Query: 135 LILGLSKKELLAKNKVGRE 153
+ G+ GR
Sbjct: 292 NVNGVVPPPSPNAVNTGRN 310
>gi|281416568|ref|ZP_06247588.1| cellulosome anchoring protein cohesin region [Clostridium
thermocellum JW20]
gi|281407970|gb|EFB38228.1| cellulosome anchoring protein cohesin region [Clostridium
thermocellum JW20]
Length = 1790
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 29/116 (25%), Gaps = 11/116 (9%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P PIP P D+ +PS + +D + I T
Sbjct: 1150 PTPSETPEEPIPTDTP---SDEPTPSDEPTPSD-EPTPSDEPTPSETPEEPIPTDT---- 1201
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP---AMDKNFCSNASGA 171
P+ + PT + + +P D+ S+
Sbjct: 1202 PSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTP 1257
>gi|68474196|ref|XP_718807.1| likely COPII vesicle coat component [Candida albicans SC5314]
gi|68474369|ref|XP_718724.1| likely COPII vesicle coat component [Candida albicans SC5314]
gi|74680107|sp|Q5AAU3|SEC31_CANAL RecName: Full=Protein transport protein SEC31
gi|46440508|gb|EAK99813.1| likely COPII vesicle coat component [Candida albicans SC5314]
gi|46440596|gb|EAK99900.1| likely COPII vesicle coat component [Candida albicans SC5314]
Length = 1265
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 40/147 (27%), Gaps = 13/147 (8%)
Query: 66 IAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS-SQHDGQIQNDISGKTVVNKPTRSTS 124
P P++ P Q PS + + + N + +RSTS
Sbjct: 918 STPTPVSAPAFGSPGQPPSAPSQPGSVGSVSSAGYPKKTFSATNVLPPPP--KSISRSTS 975
Query: 125 IDSLPTIEERLILGLS-KKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
++PT V + ++ P+ + S R+A
Sbjct: 976 RTTVPTSSTVPASPKPTPVSNKYAPAVTSDASQPPSSGFASPTLNSSPRLA--------K 1027
Query: 184 QTGTQRAINLLPANITLAFASNGNSLD 210
LP I+ A + L
Sbjct: 1028 NPYAPSVTEQLPPKISYA-TPPAHHLA 1053
>gi|68161848|emb|CAD28467.3| hypothetical protein [Homo sapiens]
Length = 414
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 32/116 (27%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 171 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 230
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
S L + + + ++ G + P + S + +
Sbjct: 231 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ 286
>gi|73958210|ref|XP_547017.2| PREDICTED: similar to MICAL-like 2 isoform 1 [Canis familiaris]
Length = 864
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 66/232 (28%), Gaps = 32/232 (13%)
Query: 56 EMIPYSVIREIAP-IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
++R AP P IP D + PS N ++ + + + G +
Sbjct: 221 AASASPMLRGPAPRQPGAIP---SDSKPPSAPQKAQEANGPRDAGPESRPAAREPVMGNS 277
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+ + + T + G + G + A +++G A
Sbjct: 278 TAKGVPATANPQA--TASSHVHAGSPARPAFLAGLQGGRASTRVANSSPAGWSSAGQHTA 335
Query: 175 IVVSGLGISQTGTQRAINLLPAN----ITLAFASN------------GNSLDRWMKEAK- 217
V+ T A++ PA +T A W A
Sbjct: 336 AVI----PRSAPTPNALDSRPATPQGRVTPQVAPPHTKVSLGPTSPGPADTPDWAPSAAS 391
Query: 218 --KKGQEAILQIPMQAFDESYNEDDSYTLKV---TQTVQQLLNRLRYSLRRG 264
++ +E Q P A V + +Q L+ LR +L R
Sbjct: 392 KMQQARERFFQTPGAAPSPGPAGRAPAPADVPSRANSREQALSCLRKALPRL 443
>gi|322504463|emb|CAM45686.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 5596
Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 37/134 (27%), Gaps = 3/134 (2%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
GL + I+ IP AP + N + + S + T
Sbjct: 5350 GLHLKIMPDDTPR---VAPIPPLTPERAAPSLQSASPNRPQRVATSMSNGATTAMMTPQP 5406
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
+ + + + S+++ S LG + ++V P
Sbjct: 5407 PPSSEQRCSTSFVRHNTLAQSRTSSNVGSTTVPPSPPQLGFTPPPAQPVSRVMPPPALQP 5466
Query: 159 AMDKNFCSNASGAR 172
+++GA
Sbjct: 5467 GQLLPLGGSSNGAE 5480
>gi|297476059|ref|XP_002688443.1| PREDICTED: AF4/FMR2 family, member 1 isoform 1 [Bos taurus]
gi|296486369|gb|DAA28482.1| AF4/FMR2 family, member 1 isoform 1 [Bos taurus]
Length = 1221
Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 30/137 (21%), Gaps = 12/137 (8%)
Query: 47 SHAFVGTISEMIPY---------SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN 97
+ A T P + P P K + +
Sbjct: 536 TEAPGSTEPPARPPDTKGKGGDSATAGHERPESKEPPPKGSSKAPRVPSEGPHAGKRSCQ 595
Query: 98 DSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
S Q G KP ++++ + + E R+
Sbjct: 596 KSPAQQEPPQRQTVGSKQPKKPIKASAPGHADAPADARACLQVESEPGLPPPASRDQ--- 652
Query: 158 PAMDKNFCSNASGARIA 174
P+ DK R A
Sbjct: 653 PSKDKPKVKTKGRPRAA 669
>gi|126332282|ref|XP_001376583.1| PREDICTED: similar to metalloprotease disintegrin [Monodelphis
domestica]
Length = 1025
Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 31/116 (26%), Gaps = 10/116 (8%)
Query: 65 EIAPIPLTIPLNIED-------KQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
E+ P P + P + K SP + + + + +
Sbjct: 790 ELTPSPASSPCPGGEYGEENEEKVSPQGVRGPLSPKPGPSQTGSQPVNVVRPLRPGP--S 847
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC-SNASGAR 172
KP S P + G +K+ + + + + A G +
Sbjct: 848 KPRDSRPARPPPPLSHSPRPGFPRKDPGDRGDRADGTGRLLPPKRPLPVNPARGPK 903
>gi|86740006|ref|YP_480406.1| heparinase II/III-like protein [Frankia sp. CcI3]
gi|86566868|gb|ABD10677.1| Heparinase II/III-like [Frankia sp. CcI3]
Length = 680
Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 56/218 (25%), Gaps = 20/218 (9%)
Query: 42 IYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN--DS 99
+ + + A + + + I P P+ IP + S + S
Sbjct: 333 GFAVPAEALRLLLPAPVRPTPIAVQGPGPVPIPAPRLAEMPTSTSQSTVGTVPRPRTPAS 392
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRE------ 153
+ D + D + P + LP E+ + GR
Sbjct: 393 DRADALLLVDSGLAVLTAGPWHLLADVGLPCPEDLPAHAHADTLAFLLWHDGRPLLVDTG 452
Query: 154 -DTEVPAMDKNFCSNASGARIAIVVS--GLGISQTGTQRAINLLPANITLAFASNGNSLD 210
T P D++ + A ++V + P +T+ +
Sbjct: 453 TSTYAPGPDRD-AERGTAAHSTVIVDHADSTEVWGAFRAGRRARPTLVTMC------HHE 505
Query: 211 RWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQ 248
A G + +P + D L V
Sbjct: 506 NVATLA--AGHDGYRHLPGRPVHWRTWRLDPSGLSVDD 541
>gi|297476061|ref|XP_002688444.1| PREDICTED: AF4/FMR2 family, member 1 isoform 2 [Bos taurus]
gi|296486370|gb|DAA28483.1| AF4/FMR2 family, member 1 isoform 2 [Bos taurus]
Length = 1221
Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 30/137 (21%), Gaps = 12/137 (8%)
Query: 47 SHAFVGTISEMIPY---------SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN 97
+ A T P + P P K + +
Sbjct: 535 TEAPGSTEPPARPPDTKGKGGDSATAGHERPESKEPPPKGSSKAPRVPSEGPHAGKRSCQ 594
Query: 98 DSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
S Q G KP ++++ + + E R+
Sbjct: 595 KSPAQQEPPQRQTVGSKQPKKPIKASAPGHADAPADARACLQVESEPGLPPPASRDQ--- 651
Query: 158 PAMDKNFCSNASGARIA 174
P+ DK R A
Sbjct: 652 PSKDKPKVKTKGRPRAA 668
>gi|300796309|ref|NP_001178454.1| AF4/FMR2 family member 1 [Bos taurus]
Length = 1221
Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 30/137 (21%), Gaps = 12/137 (8%)
Query: 47 SHAFVGTISEMIPY---------SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN 97
+ A T P + P P K + +
Sbjct: 536 TEAPGSTEPPARPPDTKGKGGDSATAGHERPESKEPPPKGSSKAPRVPSEGPHAGKRSCQ 595
Query: 98 DSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
S Q G KP ++++ + + E R+
Sbjct: 596 KSPTQQEPPQRQTVGSKQPKKPIKASAPGHADAPADARACLQVESEPGLPPPASRDQ--- 652
Query: 158 PAMDKNFCSNASGARIA 174
P+ DK R A
Sbjct: 653 PSKDKPKVKTKGRPRAA 669
>gi|194668121|ref|XP_001249489.2| PREDICTED: myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 isoform 1 [Bos taurus]
Length = 1221
Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 30/137 (21%), Gaps = 12/137 (8%)
Query: 47 SHAFVGTISEMIPY---------SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN 97
+ A T P + P P K + +
Sbjct: 535 TEAPGSTEPPARPPDTKGKGGDSATAGHERPESKEPPPKGSSKAPRVPSEGPHAGKRSCQ 594
Query: 98 DSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
S Q G KP ++++ + + E R+
Sbjct: 595 KSPTQQEPPQRQTVGSKQPKKPIKASAPGHADAPADARACLQVESEPGLPPPASRDQ--- 651
Query: 158 PAMDKNFCSNASGARIA 174
P+ DK R A
Sbjct: 652 PSKDKPKVKTKGRPRAA 668
>gi|145609680|ref|XP_001409689.1| hypothetical protein MGG_12523 [Magnaporthe oryzae 70-15]
gi|145017087|gb|EDK01450.1| hypothetical protein MGG_12523 [Magnaporthe oryzae 70-15]
Length = 707
Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 10/122 (8%), Positives = 32/122 (26%), Gaps = 6/122 (4%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P S ++ + P + K + +Q ++S ++ +
Sbjct: 187 PKPTSSVKTSSQPPKVTTTSQPPKATTESSKPPKETSQPPKETSSLPPKVTTTSQPPQIT 246
Query: 117 NKPTRSTSIDSLPTIEERLI------LGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ + + ++ K+ ++ G VP ++
Sbjct: 247 SASSLPPKDTTSQPPKDTSSKPPKDTTSQPPKDTTSQPPKGTGSASVPPPQGTASNSVPP 306
Query: 171 AR 172
+
Sbjct: 307 PQ 308
Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 5/120 (4%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQ--HDGQIQNDIS 111
+ +P V P +T ++ K + S+ +T K+ +SQ D Q
Sbjct: 228 ETSSLPPKVTTTSQPPQITSASSLPPKDTTSQPPKDTSSKPPKDTTSQPPKDTTSQPPKG 287
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV---PAMDKNFCSNA 168
+ P + T+ +S+P + + + A N V + T P D A
Sbjct: 288 TGSASVPPPQGTASNSVPPPQGTASNSVPPPQGTASNSVPPQGTASASQPPKDTVSQPPA 347
>gi|330465036|ref|YP_004402779.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
maris AB-18-032]
gi|328808007|gb|AEB42179.1| acyl-CoA dehydrogenase domain-containing protein [Verrucosispora
maris AB-18-032]
Length = 404
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 42/133 (31%), Gaps = 19/133 (14%)
Query: 233 DESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEF 292
E D ++ + + + + LR Y + + E
Sbjct: 130 SEPEAGSDVGAMRTRASYDEATD--EWVLRGQKAYA-----TNGGIAGVHVVVASVDPEL 182
Query: 293 AKRGL--LFFDDGSSPRNLTRVLAPKLNLPYM-VADLYLDDQVDR--------DKIREKL 341
RG G+ + TR L KL L AD++LDD + + E+L
Sbjct: 183 GSRGQAAFVVPPGTPGLSATRKL-RKLGLRASHTADVFLDDVRVPGRCLLGGKEALDERL 241
Query: 342 KGLEEIARTTGQA 354
R +GQA
Sbjct: 242 ARARAGKRASGQA 254
>gi|294629844|ref|ZP_06708404.1| protease [Streptomyces sp. e14]
gi|292833177|gb|EFF91526.1| protease [Streptomyces sp. e14]
Length = 1265
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 28/130 (21%), Gaps = 6/130 (4%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
G + + A + P AP P + Q+P+ T +
Sbjct: 459 GGAQAPGKAQAPREADTPASPGEAEASEAPGGADTPAARGEAQAPAGAGTLTAPGEADTS 518
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
+ + G + + L+ + P
Sbjct: 519 TPSGKANTPD---GAQTSGGTDTPDTPGGASAPGGAVPPSAPPGGLVTE---LVRSGNGP 572
Query: 159 AMDKNFCSNA 168
D F +
Sbjct: 573 VRDLAFSPDG 582
>gi|189240975|ref|XP_967763.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 830
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 27/117 (23%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ P SP+K T G + K
Sbjct: 501 PAAEKKPKAKTPTAAKKPTPAKPSTAASPAKAKPTTTPKTRAAAPKPSTGAVPKQTVPKA 560
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
KP + + + + + + D+ PA++K A+
Sbjct: 561 AAPKPRPTATKTNPTEKKPLTNGDVKPPVKASLTARKSTDSPKPALNKASPRPATAP 617
>gi|326405353|ref|YP_004285435.1| hypothetical protein ACMV_32060 [Acidiphilium multivorum AIU301]
gi|325052215|dbj|BAJ82553.1| hypothetical protein ACMV_32060 [Acidiphilium multivorum AIU301]
Length = 413
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 93/269 (34%), Gaps = 36/269 (13%)
Query: 15 KRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIP 74
R + + L+ F + +L A+ G + I
Sbjct: 37 ARPASIHATEKQRKHLLIGTLFPETGAQTLLGDEAWRGVELAIDA---------ARAGID 87
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIE-E 133
+IE ++ + + + ++ D + T T + + +P +E +
Sbjct: 88 ADIEVLRADAANPDAAIRGMIRKAGKASDIAMILGSQSSTAAFAATAAAELAGIPYVELD 147
Query: 134 RLILGLSKKELLAKNKVGREDTEVPAMDKN---------FCSNASGARIAIVVSGLGISQ 184
G+++++ +++ T+ + ++ + + A R+A++ +G +
Sbjct: 148 APADGITRRDFKILSRICTTTTDFASAAESAITTLLIPGWKTGAERLRLALLF-DIGATD 206
Query: 185 TGTQRAINL------LPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNE 238
A+ LP +++A+A+ D + ++ G E ++
Sbjct: 207 GSFAGAMLAACRRAGLPVVLSMAYATEAADFDEEVARMRRAGIELLVHA----------G 256
Query: 239 DDSYTLKVTQTVQQLLNRLRYSLRRGTGY 267
++ L + Q +Q+ R R + G GY
Sbjct: 257 RTAHVLLLYQAMQEAGWRPRMIIGAGPGY 285
>gi|333008160|gb|EGK27635.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri VA-6]
Length = 641
Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 7/125 (5%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E +P +AP + P + P L +SQ Q
Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTLV----PPQSAPQQAPTVPLPETTSQVLAARQQ 416
Query: 109 D--ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ G T K + + + P L S + + V + PA + +
Sbjct: 417 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 476
Query: 167 NASGA 171
A+
Sbjct: 477 KATTP 481
>gi|58476041|gb|AAH89447.1| Proline-rich transmembrane protein 3 [Homo sapiens]
Length = 981
Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 16/138 (11%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
P P P E PSK + + + G ++ + K+++ P
Sbjct: 313 PDAKDSPGPQPTD-PPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGP 371
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ D P + + + A+ GR + PA S +
Sbjct: 372 S-----DPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRR--------- 417
Query: 180 LGISQTGTQRAINLLPAN 197
G+ + TQRA+ P
Sbjct: 418 -GLIRVTTQRALGQPPPP 434
>gi|136255216|ref|NP_997234.3| proline-rich transmembrane protein 3 precursor [Homo sapiens]
gi|160332300|sp|Q5FWE3|PRRT3_HUMAN RecName: Full=Proline-rich transmembrane protein 3; Flags:
Precursor
Length = 981
Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 16/138 (11%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
P P P E PSK + + + G ++ + K+++ P
Sbjct: 313 PDAKDSPGPQPTD-PPASEAPDRPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGP 371
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ D P + + + A+ GR + PA S +
Sbjct: 372 S-----DPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRR--------- 417
Query: 180 LGISQTGTQRAINLLPAN 197
G+ + TQRA+ P
Sbjct: 418 -GLIRVTTQRALGQPPPP 434
>gi|50749392|ref|XP_421617.1| PREDICTED: hypothetical protein [Gallus gallus]
Length = 1147
Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 23/108 (21%), Gaps = 4/108 (3%)
Query: 31 LLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNT 90
+ G Y G + IP S P L S+
Sbjct: 101 ASGTSLPSGHQGYSQFGQ---GDVQNGIPTSTAPMQRPPASQPFLPGSAPAPVSQPSTFQ 157
Query: 91 VCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILG 138
Q + G T V+ P + P + G
Sbjct: 158 QYGPPPCSVQQLSNHMAGMTIGSTSVSAPP-PAGLGYGPPTSVPPVSG 204
>gi|226942950|ref|YP_002798023.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate
ligase [Azotobacter vinelandii DJ]
gi|226717877|gb|ACO77048.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate
ligase [Azotobacter vinelandii DJ]
Length = 450
Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 17/115 (14%)
Query: 259 YSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLN 318
+ + FGV G + E + FFD S + A N
Sbjct: 134 FLIGGVPQNFGVSARLGGS--------DFFVVEADEYDSAFFDKRSKFVHYRPRTAILNN 185
Query: 319 LPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQ 373
L + AD++ D I + L + G + + + E I + L
Sbjct: 186 LEFDHADIF----PDLAAIERQFHHLVRTIPSQGLIV-----YPTTEEAIERMLA 231
>gi|297301263|ref|XP_002805756.1| PREDICTED: methylcytosine dioxygenase TET1-like [Macaca mulatta]
Length = 1972
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 28/98 (28%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P+ P +P K D C + S+ H +SG
Sbjct: 1671 PSTPHPVKEASPVFSWSPKTASATPAPLKNDAAASCGFSERSSTPHCTMSSGRLSGANAA 1730
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED 154
S L + + + ++ G +
Sbjct: 1731 AVEGPGISQLGEAAPLPTLPAPVMEPLVNSEPPTGVTE 1768
>gi|296217144|ref|XP_002807351.1| PREDICTED: LOW QUALITY PROTEIN:
phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
2-like [Callithrix jacchus]
Length = 1535
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 5/135 (3%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK--RDNNTVCNQLKNDSS 100
+I I G S++ S + P E S+ + + + +
Sbjct: 987 WISIDKDEAGAKSKVPSVSRGSQEPRSGSRKPAFTEASCPLSRLFEEPDKPPPTGRPPAP 1046
Query: 101 QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
+ ++ + KP + + L + +L E P+
Sbjct: 1047 PRTAAREEPLTPRL---KPEGAPEPEGLAAPPPKNSFNNPAYYVLEGVPHQLLPPEPPSP 1103
Query: 161 DKNFCSNASGARIAI 175
+ A+ ++AI
Sbjct: 1104 ARAPVPPATKNKVAI 1118
>gi|88954398|gb|AAI14071.1| BCAR1 protein [Bos taurus]
Length = 886
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 79/278 (28%), Gaps = 28/278 (10%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI-Q 107
AF + P P + P P D V L+ + +
Sbjct: 348 AFTKAKPFDPTRHPLVLAVPPPDSPPAEDVYDVPPPAPDLYDVPPGLRRPGPGALYDVPR 407
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ V T + S+P ER +K+ L+ + G + A
Sbjct: 408 ERLLPPEVAGSGTADAGVYSVPPAAEREAPADAKR--LSASSTGSTRSSQSASSLEAAVP 465
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ A+ L ++ A + A G +
Sbjct: 466 GREP----------LELEVAVEALARLQQGVSATVA-------HLLDLAGSVGGCGGRRG 508
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P + + + + V V +LL R ++ T + A L + E
Sbjct: 509 PPEPQEPPAVDLRAAVAAVHAAVHELLEFARNAVGNATHTSDRTLH--AKLSRQLQKMED 566
Query: 288 IFKEFAKRGLLFFDD-----GSSPRNLTRVLAPKLNLP 320
+++ G D G++P +L R++A +P
Sbjct: 567 VYQTLVAHGQA-LDSSRGGLGATPEDLDRLVACSRAVP 603
>gi|114051089|ref|NP_001039480.1| mitochondrial inner membrane protein [Bos taurus]
gi|84708676|gb|AAI11200.1| Inner membrane protein, mitochondrial (mitofilin) [Bos taurus]
Length = 749
Score = 37.3 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 47/171 (27%), Gaps = 5/171 (2%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P R+ + S S L I G +Y F + + IPYS ++
Sbjct: 28 RPCRRYSTSGSSRLSASKIAGAGILFVGGGIGGAILYAKWDSHFRKNVEKTIPYS--DKL 85
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKND--SSQHDGQIQNDISGKTVVNKPTRSTS 124
+ L P + + + S+ G T + T
Sbjct: 86 FEMVLGSPPYTVPLPKKPIQSGPLKISSVSEVMKESKQPASQPQKQKGDTSASTTAGDTL 145
Query: 125 IDSLPTIE-ERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
P ++ E LI + K K + + AR+A
Sbjct: 146 SVPAPVVQHEELIKTDHPETGEGKPKPATSEEASSTSVRERPPEEVAARLA 196
>gi|327267507|ref|XP_003218542.1| PREDICTED: collagen alpha-1(XVII) chain-like [Anolis carolinensis]
Length = 1461
Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 28/125 (22%), Gaps = 5/125 (4%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
G + P E P LT P+ + + +
Sbjct: 671 KGAVGTPGPKGDQGEKGPRGLTGEPGSRGLPGPTGEPGAKGSAGPPGPDGHQGPRGEQGL 730
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
G P + P + G L + P S+ G
Sbjct: 731 MGAPGPRGPPGPSGDAGQPGL-----TGPQGPPGLTGSPGRPGPKGEPGSPGRVTSSDGG 785
Query: 171 ARIAI 175
+ IA+
Sbjct: 786 STIAL 790
>gi|158828199|gb|ABW81077.1| Prp9 [Cleome spinosa]
Length = 919
Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 15/167 (8%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
P R+ + R G + +P SV RE A
Sbjct: 433 SPPARRRRLPSPLPRSPSATSRS---AGSPSPVRRGGLPSPAKRPSVPSSVGRESASPSP 489
Query: 72 --------TIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
+ P +P+ R ++ +Q+K G ++ P+R
Sbjct: 490 RGRKNGLPSPPAGRRRSLTPAGRSDSESPSQVKRRGPPKRGSASPVRRRRSPSPSPSRDK 549
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVG-REDTEVPAMDKNFCSNAS 169
S+ + R G S + K++ R + +PA + +
Sbjct: 550 RGGSISPVTRR---GRSPLPVSEKSQSPVRNRSPIPARQRPSSPSHR 593
>gi|296478224|gb|DAA20339.1| breast cancer anti-estrogen resistance 1 [Bos taurus]
Length = 890
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 79/278 (28%), Gaps = 28/278 (10%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI-Q 107
AF + P P + P P D V L+ + +
Sbjct: 352 AFTKAKPFDPTRHPLVLAVPPPDSPPAEDVYDVPPPAPDLYDVPPGLRRPGPGALYDVPR 411
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ V T + S+P ER +K+ L+ + G + A
Sbjct: 412 ERLLPPEVAGSGTADAGVYSVPPAAEREAPADAKR--LSASSTGSTRSSQSASSLEAAVP 469
Query: 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQI 227
+ A+ L ++ A + A G +
Sbjct: 470 GREP----------LELEVAVEALARLQQGVSATVA-------HLLDLAGSVGGCGGRRG 512
Query: 228 PMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEV 287
P + + + + V V +LL R ++ T + A L + E
Sbjct: 513 PPEPQEPPAVDLRAAVAAVHAAVHELLEFARNAVGNATHTSDRTLH--AKLSRQLQKMED 570
Query: 288 IFKEFAKRGLLFFDD-----GSSPRNLTRVLAPKLNLP 320
+++ G D G++P +L R++A +P
Sbjct: 571 VYQTLVAHGQA-LDSSRGGLGATPEDLDRLVACSRAVP 607
>gi|189234232|ref|XP_973217.2| PREDICTED: similar to GA11375-PA [Tribolium castaneum]
gi|270002603|gb|EEZ99050.1| hypothetical protein TcasGA2_TC004924 [Tribolium castaneum]
Length = 1081
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 11/132 (8%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P ++ A T P I ++ + + Q + V
Sbjct: 358 ARPTPLLAWGARQTKTQPPIIMQSVKSTQVQKPVLQTAVAPTVPQIPTSPT--STTPLVT 415
Query: 117 NKPTRS---TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
P S + T + L V TE P+ + A R
Sbjct: 416 CAPPPSYTASIQQKGYTTSPKPAAPLPTTPANNTTPVVVPTTEPPSYASTMQAKAKAQR- 474
Query: 174 AIVVSGLGISQT 185
G+G+S
Sbjct: 475 -----GMGLSPH 481
>gi|328850709|gb|EGF99870.1| hypothetical protein MELLADRAFT_112323 [Melampsora larici-populina
98AG31]
Length = 516
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 12/127 (9%), Positives = 29/127 (22%), Gaps = 5/127 (3%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQ---LKNDS 99
S++ + P P P++ SP+ + +
Sbjct: 317 LTAPSNSSSRIVPGPSPPVRNETQVPTPVSQAPMETPSPSPTTSEATPTATPESASRAAP 376
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
I+ + D + + SK + + ++ + A
Sbjct: 377 DGSASGATPGITPDANTGATPDQSPQDGPARNDGTPM--TSKNDTIDQDTQAEKPKTSEA 434
Query: 160 MDKNFCS 166
S
Sbjct: 435 SPDPMTS 441
>gi|319793512|ref|YP_004155152.1| translation initiation factor if-2 [Variovorax paradoxus EPS]
gi|315595975|gb|ADU37041.1| translation initiation factor IF-2 [Variovorax paradoxus EPS]
Length = 984
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 51/154 (33%), Gaps = 28/154 (18%)
Query: 245 KVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGS 304
V LL+ +R + G+ + GA + + + F D
Sbjct: 494 HVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGM-----------VSFLD--- 539
Query: 305 SPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV----- 359
+P + D+ + D + + K + A+ G I VA+
Sbjct: 540 TPGHEAFTAMRARGAQAT--DIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKVDK 597
Query: 360 AFDESIEVISQWL------QQEHVRDVSVVPLSC 387
D +++ + Q L +E+ DV VP+S
Sbjct: 598 P-DANLDRVKQELVAEEVVPEEYGGDVPFVPVSA 630
>gi|291240549|ref|XP_002740181.1| PREDICTED: epidermal growth factor receptor pathway substrate
15-like 1-like [Saccoglossus kowalevskii]
Length = 1057
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 20/86 (23%), Gaps = 3/86 (3%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISG 112
T P + +P + P + P+ + + + G + G
Sbjct: 798 TTLAQTPDPF---SSGVPGSDPFSGGTASVPASDPFSGGTAAVPSSDPFSGGTSSDPFGG 854
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILG 138
T + + G
Sbjct: 855 GTASISSSDPFGDGAPSAPASDPFSG 880
>gi|24111853|ref|NP_706363.1| DNA polymerase III subunits gamma and tau [Shigella flexneri 2a
str. 301]
gi|30061970|ref|NP_836141.1| DNA polymerase III subunits gamma and tau [Shigella flexneri 2a
str. 2457T]
gi|110804497|ref|YP_688017.1| DNA polymerase III subunits gamma and tau [Shigella flexneri 5 str.
8401]
gi|24050648|gb|AAN42070.1| DNA polymerase III, tau and gamma subunits; DNA elongation factor
III [Shigella flexneri 2a str. 301]
gi|30040214|gb|AAP15947.1| DNA polymerase III, tau and gamma subunits; DNA elongation factor
III [Shigella flexneri 2a str. 2457T]
gi|110614045|gb|ABF02712.1| DNA polymerase III, tau and gamma subunits [Shigella flexneri 5
str. 8401]
gi|281599809|gb|ADA72793.1| DNA polymerase III, tau and gamma subunits [Shigella flexneri
2002017]
gi|313646900|gb|EFS11357.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri 2a
str. 2457T]
gi|332760763|gb|EGJ91051.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri
4343-70]
gi|332768395|gb|EGJ98579.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri
2930-71]
Length = 641
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 7/125 (5%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E +P +AP + P + P L +SQ Q
Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTLV----PPQSAPQQAPTVPLPETTSQVLAARQQ 416
Query: 109 D--ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ G T K + + + P L S + + V + PA + +
Sbjct: 417 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 476
Query: 167 NASGA 171
A+
Sbjct: 477 KATTP 481
>gi|312215641|emb|CBX95593.1| hypothetical protein [Leptosphaeria maculans]
Length = 875
Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 12/132 (9%), Positives = 21/132 (15%), Gaps = 12/132 (9%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIED------KQSPSKRDNNTVCNQLKNDS------S 100
P V + A P P + +P +
Sbjct: 424 ETPAYTPAPVPSQAAYPPGPKPETPKPEVPKPETPAPVPSQGSYPPGPKPEAPKPEVPKP 483
Query: 101 QHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAM 160
+ + + K E PA
Sbjct: 484 ETPAPPSQGSYPPGPKPETPKPEVPKPETPAPVPSQGSYPPGPKPETPKPEVPKPETPAP 543
Query: 161 DKNFCSNASGAR 172
+ S G +
Sbjct: 544 VPSQGSYPPGPK 555
>gi|31753117|gb|AAH53905.1| TET1 protein [Homo sapiens]
Length = 328
Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 32/116 (27%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
++E +P P +P K D C + S+ H +SG
Sbjct: 27 PSAPHPVKEASPGFSWSPKTASATPAPLKNDATASCGFSERSSTPHCTMPSGRLSGANAA 86
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
S L + + + ++ G + P + S + +
Sbjct: 87 AADGPGISQLGEVAPLPTLSAPVMEPLINSEPSTGVTEPLTPHQPNHQPSFLTSPQ 142
>gi|254421956|ref|ZP_05035674.1| protein kinase domain [Synechococcus sp. PCC 7335]
gi|196189445|gb|EDX84409.1| protein kinase domain [Synechococcus sp. PCC 7335]
Length = 679
Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 47/151 (31%), Gaps = 14/151 (9%)
Query: 5 LNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
L P ++ R + + +G G + + + T E S+
Sbjct: 343 LQMPFERE---RPPSFFENPVAVGTLAAGLVTAAGFGGWATVRYLNSPTTPEPTIPSI-- 397
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGK-----TVVNKP 119
P+ +P + P++ NQ + + I+ D+ G + +P
Sbjct: 398 ---PLESEVPPTPTAEPQPAEPQPAEY-NQPLSLTPDVTETIEGDLLGGDRLNYLLFAEP 453
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKV 150
+ ++ P +LG + + +
Sbjct: 454 GQQLTVAVAPEGVLLSVLGPDNRPVDRDARR 484
>gi|327292849|ref|XP_003231122.1| hypothetical protein TERG_08421 [Trichophyton rubrum CBS 118892]
gi|326466752|gb|EGD92205.1| hypothetical protein TERG_08421 [Trichophyton rubrum CBS 118892]
Length = 630
Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 30/120 (25%)
Query: 52 GTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS 111
G E P P P + ++ +++ + KND + +
Sbjct: 153 GNGEENDPPKNDPPKNDPPKNDPPKNDPPKNDPPKNDPPKNDPPKNDPPKSEPPKSEPPK 212
Query: 112 GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ ++P +S S P + + R+ A
Sbjct: 213 SEPPKSEPPKSEPPKSEPPKSDPPKTEPPPSVPTQQPDPPRDSVPNRPPPDPMTQQPDPA 272
>gi|294955908|ref|XP_002788740.1| hypothetical protein Pmar_PMAR010282 [Perkinsus marinus ATCC 50983]
gi|239904281|gb|EER20536.1| hypothetical protein Pmar_PMAR010282 [Perkinsus marinus ATCC 50983]
Length = 1053
Score = 37.0 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 12/163 (7%)
Query: 14 PKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTI 73
+RK+ ++R S P + +R IAP PL
Sbjct: 64 ARRKARTPAKLNRR---AAGDLLNTSGSCL---PDTPGRYAGMPSPPAELRAIAPTPLRA 117
Query: 74 PLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS--LPTI 131
P K +L +SGK + P +++ I + P
Sbjct: 118 PHPTGSPPVTPKGIPPLPLGKL----GLIGKTSAGPVSGKALPPPPPKTSPILTCLPPRT 173
Query: 132 EERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
+ G + +G+ P +G +++
Sbjct: 174 SPKSAKGSPPPTCMNVASLGKASPPPPLPTGRGIPPLAGPKVS 216
>gi|45201234|ref|NP_986804.1| AGR138Wp [Ashbya gossypii ATCC 10895]
gi|44986088|gb|AAS54628.1| AGR138Wp [Ashbya gossypii ATCC 10895]
Length = 504
Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 11/124 (8%), Positives = 23/124 (18%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ 107
+ P A P + E +S + + + +
Sbjct: 338 EPPKSSAPPAQPPKSSAPPAEPPKSSAPPAEPPKSSAPPAQPPKSSAPPAEPPKSSAPPV 397
Query: 108 NDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+P +S++ + P K
Sbjct: 398 EPPKSSAPPVEPPKSSAPPAEPPKSSAPPAEPPKSTAPPAEPPKSTAPPAEPPKSTAPPA 457
Query: 168 ASGA 171
AS
Sbjct: 458 ASQP 461
>gi|120556255|ref|YP_960606.1| translation initiation factor IF-2 [Marinobacter aquaeolei VT8]
gi|166232555|sp|A1U600|IF2_MARAV RecName: Full=Translation initiation factor IF-2
gi|120326104|gb|ABM20419.1| bacterial translation initiation factor 2 (bIF-2) [Marinobacter
aquaeolei VT8]
Length = 848
Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 52/327 (15%), Positives = 98/327 (29%), Gaps = 63/327 (19%)
Query: 85 KRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL 144
K ++ + + ++ +T + KP R+ E+R K +
Sbjct: 203 KPKKKQAGHRGPRSRPVEEPVVLSEDEEETTLRKPLRAKK----KPKEKRHAFERPTKPM 258
Query: 145 LAKNKVGREDTEVPAMDKNFCSNASGARIAIVV---SGLGISQTGTQRAINLLPANIT-- 199
+ + ++ T + +A V+ G+G+ T Q +T
Sbjct: 259 VREVQIPETITVGDLAQRMAVKSAD------VIKTLMGMGVMATINQALDQETAILVTEE 312
Query: 200 LAFASNGNSLDRWMKE------AKKKGQEAILQIPMQAFDESYNEDDSYTLKVTQTVQQL 253
L S D + +E +G+E I + P+ + V L
Sbjct: 313 LGHKPKAVSEDAFEEEVLSEITGPDEGKEKIKRAPVVSVMG----------HVDHGKTSL 362
Query: 254 LNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVL 313
L+ +R + G+ + GA + + + F D +P +
Sbjct: 363 LDHIRRAKVAAGESGGITQHIGAYHVETEHGM-----------VSFLD---TPGHAAFTA 408
Query: 314 APKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAV-------AFDESIE 366
D+ + D + + K E AR+ G I VA+ A +
Sbjct: 409 MRARGAQCT--DIVILVVAADDGVMPQTKEAVEHARSAGVPIVVAINKMDKEEADP---D 463
Query: 367 VISQWLQQEH------VRDVSVVPLSC 387
I L DV VP+S
Sbjct: 464 RIKNELSALEVIPEDWGGDVQFVPVSA 490
>gi|333020740|gb|EGK40000.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri
K-227]
Length = 603
Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 7/125 (5%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E +P +AP + P + P L +SQ Q
Sbjct: 323 PRMPLPEPEVPRQSFAPVAPTAVMTPTLV----PPQSAPQQAPTVPLPETTSQVLAARQQ 378
Query: 109 D--ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ G T K + + + P L S + + V + PA + +
Sbjct: 379 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 438
Query: 167 NASGA 171
A+
Sbjct: 439 KATTP 443
>gi|325114895|emb|CBZ50452.1| hypothetical protein NCLIV_009210 [Neospora caninum Liverpool]
Length = 3773
Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 47/166 (28%), Gaps = 7/166 (4%)
Query: 6 NHPLRKKTPKRKSFYSQII-SRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIR 64
PL P R+ I R G ++ + + G G E + +
Sbjct: 533 TTPLVNPPPPRRRNVLDIRDPRTGKLVIGGSLLDGAGFLAEKKETP-GDDKEKGGSAQKQ 591
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
+ P E+K++ S +L + S D G + P +
Sbjct: 592 KEG-----QPGKKEEKRAWSGPPRQGDGEKLGDGSGPKDASGAKAKGGDSSETVPKPAVV 646
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+D+ + + +++ E ++ S +
Sbjct: 647 VDAPGPAAKSKEAAPASSPRAEESRPSDEKDSERKKEEGTPSESRA 692
>gi|49246229|gb|AAT58250.1| PMEL17 protein [Gallus gallus]
Length = 783
Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 292 FAARLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 347
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 348 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVANAAAGTDPT 407
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 408 ADPLPPTSVSSGGDAP 423
>gi|1527143|gb|AAC97559.1| DNA polymerase III tau subunit [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 642
Score = 37.0 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQL---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|301606717|ref|XP_002932960.1| PREDICTED: BUD13 homolog [Xenopus (Silurana) tropicalis]
Length = 804
Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 27/105 (25%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
A P + D P ++ ++ L + G+ P+
Sbjct: 149 ASPPCRKRHDSSDPSPPPRKRQDSSDKSLPRRGRHNSTDPSPPRRGRHASPGPSPPRRGR 208
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
G + + GR D+ P+ + ++
Sbjct: 209 HASPDPSPPRRGRHDSPDPSPPRRGRHDSPDPSPPRRGRHDSPDP 253
>gi|21749264|dbj|BAC03564.1| unnamed protein product [Homo sapiens]
Length = 667
Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 16/138 (11%)
Query: 60 YSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKP 119
P P P E PSK + + + G ++ + K+++ P
Sbjct: 313 PDAKDSPGPQPTD-PPASEAPDGPSKPERAAMNGADPISPQRVRGAVEAPGTPKSLIPGP 371
Query: 120 TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSG 179
+ D P + + + A+ GR + PA S +
Sbjct: 372 S-----DPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRR--------- 417
Query: 180 LGISQTGTQRAINLLPAN 197
G+ + TQRA+ P
Sbjct: 418 -GLIRVTTQRALGQPPPP 434
>gi|332761482|gb|EGJ91764.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri
2747-71]
gi|333007940|gb|EGK27416.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri
K-218]
gi|333021884|gb|EGK41132.1| DNA polymerase III, subunits gamma and tau [Shigella flexneri
K-304]
Length = 618
Score = 37.0 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 7/125 (5%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
+ E +P +AP + P + P L +SQ Q
Sbjct: 338 PRMPLPEPEVPRQSFAPVAPTAVMTPTLV----PPQSAPQQAPTVPLPETTSQVLAARQQ 393
Query: 109 D--ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+ G T K + + + P L S + + V + PA + +
Sbjct: 394 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 453
Query: 167 NASGA 171
A+
Sbjct: 454 KATTP 458
>gi|302530125|ref|ZP_07282467.1| hypothetical protein SSMG_06507 [Streptomyces sp. AA4]
gi|302439020|gb|EFL10836.1| hypothetical protein SSMG_06507 [Streptomyces sp. AA4]
Length = 621
Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 34/116 (29%), Gaps = 9/116 (7%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
E P S +AP P T P + + PS + + + + S
Sbjct: 207 ENPPPSTGSAVAPEPSTPPPSAGAENPPSSAGSAAHPERAADAEHSVPALPVDQPS---- 262
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
P ++ PT + GL E V P D ++AS
Sbjct: 263 --APPPLPGTENQPTSTADSVPGLPVDEPNTTPPVAATP---PLPDLEQAASASDG 313
>gi|293336809|ref|NP_001169375.1| hypothetical protein LOC100383243 [Zea mays]
gi|224028983|gb|ACN33567.1| unknown [Zea mays]
Length = 607
Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 35/127 (27%), Gaps = 7/127 (5%)
Query: 49 AFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS----QHDG 104
S AP+P +P + PSK + + S
Sbjct: 30 DMDKDASLPSKSPRTNRAAPVPPKLPSADKATLVPSKLPSVDKATPVPQKSPLVNKVAQA 89
Query: 105 QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNF 164
+ ++ K ++P + P + + K L + + D P ++
Sbjct: 90 RPKSPAVDKATPHRPKSPAVDKATPVRSQSPAVD---KATLVRPQSPAVDKATPVRPQSA 146
Query: 165 CSNASGA 171
+ +
Sbjct: 147 AVDKATP 153
>gi|268577431|ref|XP_002643698.1| Hypothetical protein CBG01887 [Caenorhabditis briggsae]
Length = 910
Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 28/128 (21%), Gaps = 15/128 (11%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQS---------PSKRDNNTVCNQLKNDSSQHDGQIQN 108
P R P L P E+ + P Q + + +
Sbjct: 266 APPEGKRPRTPNDLDTPAADEEPVAEEADAASEVPPTPKTAASEKQSVPATPRSAVPSEV 325
Query: 109 DISGKTVVNKPTRSTSIDSLP------TIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
+ K+ T + P + A ++V D
Sbjct: 326 PATPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSDV 385
Query: 163 NFCSNASG 170
++G
Sbjct: 386 PPTPKSNG 393
>gi|238061456|ref|ZP_04606165.1| hypothetical protein MCAG_02422 [Micromonospora sp. ATCC 39149]
gi|237883267|gb|EEP72095.1| hypothetical protein MCAG_02422 [Micromonospora sp. ATCC 39149]
Length = 1054
Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 49/341 (14%), Positives = 79/341 (23%), Gaps = 95/341 (27%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNN--TVCNQLKNDSSQHDGQIQNDISGK- 113
P V RE PIP P P + + Q + +
Sbjct: 36 ASPRPVGREHPPIPHQQPAVAGPPARPEIPPAPVEQAPTPAPQNRPRVPQQPVDRLPAAR 95
Query: 114 --------------------------------TVVNKPTRSTSIDSLPTIEERLILGLSK 141
V +P RS + + +
Sbjct: 96 PATAPELPPPPAVVTPPTDPDDETYGWRDVEPPVHREPERSPQLTAPSPRGPESERPARR 155
Query: 142 KELLAKNKVGREDTE----------------VPAMDKNFCSNASGARIAIVVSGLGISQT 185
A + GRE T PA +I G
Sbjct: 156 APEPAPSPAGREITPPRQRTVDRRERSGKPTRPAKPARPARPVKPPKIK-----FGDRDP 210
Query: 186 GTQRAINLLPANITLAFASNGNSLDRWMKEAK-----KKGQEAILQIPMQAFDESYNEDD 240
+ AI + ++T F N + W+ E + +EA+L A E Y
Sbjct: 211 SVELAITEIAGHLT--FTPNTVTAWYWLPEVRWAFRPDAEREALL----AAISEQYAGLA 264
Query: 241 SYTLKVTQT-----VQQLLNRLRYS----LRRGTGYFG--------------VMNYRGAM 277
+ L + +T + + L G G V + G
Sbjct: 265 GFRLHLRRTTRPFPADEWARTIDAHTASPLPDVPGTAGWGDHLVAAQRHLLSVNHAEGQT 324
Query: 278 LLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLN 318
L + + +R L + R + KL
Sbjct: 325 YLGVTFARRSLGDSLTERLL-----RTFGRGVAESERRKLG 360
>gi|123294331|emb|CAM19891.1| SPEN homolog, transcriptional regulator (Drosophila) [Mus musculus]
gi|123295986|emb|CAM20393.1| SPEN homolog, transcriptional regulator (Drosophila) [Mus musculus]
Length = 3620
Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 33/122 (27%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ + P + PIP P P++ + + + G ++
Sbjct: 3299 PLQSTQSAQPAPSTQATQPIPPAPPCQPSQLSQPAQPPSGKIPQVSQEAKGTQTGGVEQT 3358
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
N+P+ + +E S + K + + A + A+
Sbjct: 3359 RLPAIPTNRPSEPHAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAAPKQPLFVPAN 3418
Query: 170 GA 171
Sbjct: 3419 SG 3420
>gi|120587001|ref|NP_062737.2| msx2-interacting protein [Mus musculus]
gi|123294332|emb|CAM19892.1| SPEN homolog, transcriptional regulator (Drosophila) [Mus musculus]
gi|123295985|emb|CAM20392.1| SPEN homolog, transcriptional regulator (Drosophila) [Mus musculus]
Length = 3643
Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 33/122 (27%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ + P + PIP P P++ + + + G ++
Sbjct: 3322 PLQSTQSAQPAPSTQATQPIPPAPPCQPSQLSQPAQPPSGKIPQVSQEAKGTQTGGVEQT 3381
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
N+P+ + +E S + K + + A + A+
Sbjct: 3382 RLPAIPTNRPSEPHAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAAPKQPLFVPAN 3441
Query: 170 GA 171
Sbjct: 3442 SG 3443
>gi|5916179|gb|AAD55931.1|AF156529_1 Msx2 interacting nuclear target protein [Mus musculus]
Length = 3576
Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 33/122 (27%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ + P + PIP P P++ + + + G ++
Sbjct: 3255 PLQSTQSAQPAPSTQATQPIPPAPPCQPSQLSQPAQPPSGKIPQVSQEAKGTQTGGVEQT 3314
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
N+P+ + +E S + K + + A + A+
Sbjct: 3315 RLPAIPTNRPSEPHAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAAPKQPLFVPAN 3374
Query: 170 GA 171
Sbjct: 3375 SG 3376
>gi|292557712|gb|ADE30713.1| Translation initiation factor 2 (IF-2; GTPase) [Streptococcus suis
GZ1]
Length = 779
Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 30/123 (24%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
S AP + + +P D + S + Q +
Sbjct: 446 PEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQVPSIPEEQPKET 505
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ + + T T EE + + + ++T P + K
Sbjct: 506 PAPEEPKKEDTPQTPQAPSTPKEEAPKEEVPTPPAPSVPEEQPKETPTPEVPKQEDVQPE 565
Query: 170 GAR 172
+
Sbjct: 566 APK 568
>gi|281204153|gb|EFA78349.1| myosin IC [Polysphondylium pallidum PN500]
Length = 1191
Score = 37.0 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Query: 46 ISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKR-DNNTVCNQLKNDSSQH-- 102
++ A G ++ +P +++AP P P +K + +
Sbjct: 1010 MAPAPGGAPAKPMPTPGAKKMAPAPGGAPAKPMPTPGVAKTMPTPGAAKPMPTPGAAKPM 1069
Query: 103 --DGQIQNDISGKTVVNKPTRSTS 124
G + + V PT
Sbjct: 1070 PTPGAAKPMPTPGAVKPMPTPGAG 1093
>gi|194442832|ref|YP_002039727.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194401495|gb|ACF61717.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 642
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|89900094|ref|YP_522565.1| phospholipase D/transphosphatidylase [Rhodoferax ferrireducens
T118]
gi|89344831|gb|ABD69034.1| phospholipase D/Transphosphatidylase [Rhodoferax ferrireducens
T118]
Length = 411
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Query: 310 TRVLAPKLNLPYMVADLYL-DDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVI 368
LA + ADL L D+ +R +I + ART I +A A+ +
Sbjct: 210 AGTLAHEAAGENTNADLVLRDNLRNRSRIERAYRKAIGAARTE---IIIANAYFVPGRKL 266
Query: 369 SQWLQQEHVRDVSV 382
+ L R V V
Sbjct: 267 RKGLMHAAQRGVRV 280
>gi|13094237|dbj|BAB32786.1| Msx-2 interacting nuclear target protein [Mus musculus]
Length = 3551
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 33/122 (27%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ + P + PIP P P++ + + + G ++
Sbjct: 3230 PLQSTQSAQPAPSTQATQPIPPAPPCQPSQLSQPAQPPSGKIPQVSQEAKGTQTGGVEQT 3289
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
N+P+ + +E S + K + + A + A+
Sbjct: 3290 RLPAIPTNRPSEPHAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAAPKQPLFVPAN 3349
Query: 170 GA 171
Sbjct: 3350 SG 3351
>gi|329894957|ref|ZP_08270756.1| Ribonuclease E [gamma proteobacterium IMCC3088]
gi|328922686|gb|EGG30021.1| Ribonuclease E [gamma proteobacterium IMCC3088]
Length = 883
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 37/155 (23%), Gaps = 5/155 (3%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
+S D+ R+ PKR+ + L +
Sbjct: 645 VSTDIVETAREDKPKRRPRNQRRAPTRERANRDQIADEALQAVAAAQTEVASNEAPKPVN 704
Query: 61 SVIREIAPIPLTIPLNIEDK--QSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
+E A I + D + V + ++Q + ++ + V
Sbjct: 705 PEAQEAAEIVSSAEQTNTDTVAAKAQTAPGDAVDAGVSESTAQLTARDEDTTTEPVVAET 764
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRE 153
+ T ++ + V E
Sbjct: 765 VKQETETR---VTDDAAAESTDLSNTSEASAVAEE 796
>gi|325091248|gb|EGC44558.1| protein kinase [Ajellomyces capsulatus H88]
Length = 1126
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 41/197 (20%), Gaps = 27/197 (13%)
Query: 50 FVGTISEMIPYSVIREI-APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQN 108
G + P + P + SP ++ + SS
Sbjct: 612 PAGESGQKPPDPGYGQPLKPASVEAISAAHSSYSPQSPVASSRQSHPPRGSSNAAAAAAA 671
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLI--LGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
+G R S P ER G+ + + G D +
Sbjct: 672 AATG-------MRPPSQPGPPAAYERPGEYPGVRPADQYQTDPRGIADAARQPQQQPPSH 724
Query: 167 NASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQ 226
+ GT LP L A + + Q
Sbjct: 725 AHYDPS--------AYASIGTYGQAPQLPP---LQVAPPP------AQYGHSQHTPLTSQ 767
Query: 227 IPMQAFDESYNEDDSYT 243
PM A +
Sbjct: 768 PPMSALPMKEPQSGPVA 784
>gi|260833676|ref|XP_002611838.1| hypothetical protein BRAFLDRAFT_123362 [Branchiostoma floridae]
gi|229297210|gb|EEN67847.1| hypothetical protein BRAFLDRAFT_123362 [Branchiostoma floridae]
Length = 784
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 34/116 (29%), Gaps = 7/116 (6%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVN 117
P ++ AP+ +T P + + +P + + + VV
Sbjct: 227 TPAPMVETPAPVVVTTPAPMVETPAPVVVTTPVPKVETP-APVVVTTPVAKVETPAPVVV 285
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
P + + + K+ + E PA+ + + A ++
Sbjct: 286 TTPVPKEETPAPVVVTT------PQPIKVTTKLPTQKPETPALTEKPEAPAPVEKV 335
>gi|316939674|gb|ADU73708.1| cellulosome anchoring protein cohesin region [Clostridium
thermocellum DSM 1313]
Length = 1615
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 29/124 (23%), Gaps = 15/124 (12%)
Query: 59 PYSVIREIAPIPLTIP---LNIEDKQSPSKRDNNT-----VCNQLKNDSSQHDGQIQNDI 110
P PIP P D+ +PS + +D + I
Sbjct: 804 PTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPI 863
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP---AMDKNFCSN 167
T P+ + PT + + +P D+ S+
Sbjct: 864 PTDT----PSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSD 919
Query: 168 ASGA 171
Sbjct: 920 EPTP 923
Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 37/137 (27%), Gaps = 19/137 (13%)
Query: 40 LSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS 99
+S Y++I A + S+ PIP P + + +D
Sbjct: 758 ISGYVVIQPAPIKAASD----------EPIPTDTP----SDEPTPSDEPTPSDEPTPSDE 803
Query: 100 SQHDGQIQNDISGKTVVNKPTRS--TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
+ I T ++PT S + PT + + +
Sbjct: 804 PTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPI 863
Query: 158 P---AMDKNFCSNASGA 171
P D+ S+
Sbjct: 864 PTDTPSDEPTPSDEPTP 880
>gi|37999864|sp|Q62504|MINT_MOUSE RecName: Full=Msx2-interacting protein; AltName:
Full=SMART/HDAC1-associated repressor protein; AltName:
Full=SPEN homolog
Length = 3644
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 33/122 (27%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+ + P + PIP P P++ + + + G ++
Sbjct: 3323 PLQSTQSAQPAPSTQATQPIPPAPPCQPSQLSQPAQPPSGKIPQVSQEAKGTQTGGVEQT 3382
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
N+P+ + +E S + K + + A + A+
Sbjct: 3383 RLPAIPTNRPSEPHAQLQRAPVETAQPAHPSPVSVSMKPDLPSPLSSQAAPKQPLFVPAN 3442
Query: 170 GA 171
Sbjct: 3443 SG 3444
>gi|56414361|ref|YP_151436.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197363281|ref|YP_002142918.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|56128618|gb|AAV78124.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094758|emb|CAR60291.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 642
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|168818899|ref|ZP_02830899.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205344020|gb|EDZ30784.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
Length = 642
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|161615318|ref|YP_001589283.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|161364682|gb|ABX68450.1| hypothetical protein SPAB_03088 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 642
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|260835772|ref|XP_002612881.1| hypothetical protein BRAFLDRAFT_127281 [Branchiostoma floridae]
gi|229298263|gb|EEN68890.1| hypothetical protein BRAFLDRAFT_127281 [Branchiostoma floridae]
Length = 1860
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 8/132 (6%)
Query: 49 AFVGTISEMIPY-SVIREIAPIPLTIPLNIED--KQSPSKRDNNTVCNQLKNDSSQHD-G 104
A T + + E AP + P + +QSP++ ++ +
Sbjct: 40 APEATEKPPVTTETATEEPAPEAVETPASEPAALEQSPAQEAAQVAEIPPQSAEAAPTAA 99
Query: 105 QIQNDISGKTVVNKP---TRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
Q S VV++ + + + G S + V E P
Sbjct: 100 QTTEAASPAPVVDETAVESPVAVVAEATPQTDGAQAGGSPVPAAEETPVPEAPRE-PVKP 158
Query: 162 KNFCSNASGARI 173
+ S A I
Sbjct: 159 PVVSTGQSPATI 170
>gi|49246219|gb|AAT58245.1| PMEL17 protein [Gallus gallus]
Length = 788
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 32/136 (23%), Gaps = 7/136 (5%)
Query: 39 GLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKND 98
+ +L + + + P V P+P P + P + N
Sbjct: 292 FAARLVLQAAIPLSSCGTSAPPVVDPTTGPVPSLGPTATQ----PVGPTGSGTATAPSNL 347
Query: 99 SSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL---LAKNKVGREDT 155
+ + P T + + L L +A G + T
Sbjct: 348 TGSGTAAAPGTTAAPRASGAPAEPTGVSVAVLSDSAATEPLPDPVLSTAVANAAAGTDPT 407
Query: 156 EVPAMDKNFCSNASGA 171
P + S
Sbjct: 408 ADPLPPTSVSSGGDAP 423
>gi|238911386|ref|ZP_04655223.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
Length = 642
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|16763864|ref|NP_459479.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|167990471|ref|ZP_02571571.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168465581|ref|ZP_02699463.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|20141409|sp|P74876|DPO3X_SALTY RecName: Full=DNA polymerase III subunit tau; Contains: RecName:
Full=DNA polymerase III subunit gamma
gi|16418992|gb|AAL19438.1| DNA polymerase III, tau and gamma subunits [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|195631598|gb|EDX50118.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|205330903|gb|EDZ17667.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261245766|emb|CBG23563.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992201|gb|ACY87086.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157093|emb|CBW16577.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911516|dbj|BAJ35490.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321226062|gb|EFX51113.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323128803|gb|ADX16233.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332987433|gb|AEF06416.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 642
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQL---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|313228315|emb|CBY23464.1| unnamed protein product [Oikopleura dioica]
Length = 1384
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 9/126 (7%), Positives = 27/126 (21%), Gaps = 10/126 (7%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSK---RDNNTVCNQLKNDSSQHDGQIQNDISG 112
+ P + P+ + SP+ + + + +
Sbjct: 99 QSAPRPSSQAALSSPIAAAPQNQQNGSPTTMNPPPPAQSPKTMPPANQMMHSPMARQATP 158
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV-------PAMDKNFC 165
+ P +S + P ++ ++ + PA +
Sbjct: 159 QAASPAPPQSPMSNGHPPQAPSPAQSSAQTPPMSFAQQSPGHPASAGHYMRHPATGQPMP 218
Query: 166 SNASGA 171
Sbjct: 219 YPHGHP 224
>gi|297680524|ref|XP_002818059.1| PREDICTED: calcium/calmodulin-dependent protein kinase type II
subunit beta-like [Pongo abelii]
Length = 599
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 30/115 (26%), Gaps = 8/115 (6%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNN-----TVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P+P P +PS R ++ + +S +
Sbjct: 360 EAEGPLPCPSPAPFSPLPAPSTRISDILNSVRRGSGTPEAEGPLSVGPPPCLSPALLGPL 419
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
P+ S I I + G E + VG P + + + I
Sbjct: 420 PSPSPRISD---ILNSVRRGSGTPEAEGPSPVGTPPCPFPTIPGPLPTPSRKQEI 471
>gi|284991425|ref|YP_003409979.1| peptidase M28 [Geodermatophilus obscurus DSM 43160]
gi|284064670|gb|ADB75608.1| peptidase M28 [Geodermatophilus obscurus DSM 43160]
Length = 778
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 42/167 (25%), Gaps = 13/167 (7%)
Query: 8 PLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIA 67
PL +R+ + + L L GL I + A E + + R
Sbjct: 547 PLPHTPRRRQVRRTAAVPTAVLLLAVGMTAAGLVINRAGATAPRQEQLEYVLDADARTAL 606
Query: 68 PIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDS 127
T P + R + + L P + +
Sbjct: 607 WTSRTGPRSTWS-AELLTRSPARLDDVLPRAGDAPLAH------------GPAPLVDLAA 653
Query: 128 LPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
++EL+ + R V + GAR+A
Sbjct: 654 PEVAVVADTARDGQRELVLRLSSARGAAAVGLWVDAAGATVRGARVA 700
>gi|189028460|sp|Q2RMS0|IF2_RHORT RecName: Full=Translation initiation factor IF-2
Length = 866
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 34/320 (10%), Positives = 85/320 (26%), Gaps = 59/320 (18%)
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEER 134
+ P+ + + + + ++D + K V ++ +E +
Sbjct: 177 PGPDASARPAA-EAPRSPTEAPRPGPRRVVEDEDDDAPKKVASRGAVPPKPAPAKRVEPK 235
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL 194
L+ L ++ V A+ + A + + +R + +
Sbjct: 236 RRGKLTVTAALEGDERSERGRSVAALRRAKQKEKRKAEM----------MSPAERVVREV 285
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEA---ILQIPMQAFDESYNEDDSYTLKVTQ--- 248
+ ++ ++G ++++ + A + D+ L V +
Sbjct: 286 -------IIPDVINVQELANRMAERGANVIKTLMKMGVMATINQTIDADTAELVVAEFGH 338
Query: 249 -----TVQQLLNRLRYSLRRG-------TGYFGVMNYRGAMLLSNKESAEV--------- 287
+ + L +L G VM + S ++
Sbjct: 339 ASRRVSDSDVELGLGDALPDGTEVLTSRPPVVTVMGHVDHGKTSLLDAMRKTDVAGGEAG 398
Query: 288 -------IFKEFAKRG--LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++ K G + F D +P + D+ + D I
Sbjct: 399 GITQHIGAYQVVTKSGQKITFID---TPGHAAFTAMRARGARVT--DIVVLVVAANDGIM 453
Query: 339 EKLKGLEEIARTTGQAIGVA 358
+ AR + VA
Sbjct: 454 PQTIEAIRHARAAEVPVVVA 473
>gi|281200943|gb|EFA75157.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
PN500]
Length = 1098
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 31/127 (24%), Gaps = 13/127 (10%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNN--------TVCNQLKNDSSQHDGQIQNDISG 112
S A + P + + PS + Q+ +++
Sbjct: 910 SAASAPATPTSSTPPSGQQPVVPSSTPPSNQPPAPPTRSGASAPQPPPQNAKPTSPEVTP 969
Query: 113 KTVVNKPTRSTSID-----SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
PT I +L R I G L E PA + +
Sbjct: 970 DKPTTGPTFKPGIKVNVNPALAGAIARNIGGGGAPPLRKPAAPAPEPVSTPAPEPSKPKP 1029
Query: 168 ASGARIA 174
A R A
Sbjct: 1030 AVAPRTA 1036
>gi|269219317|ref|ZP_06163171.1| 5-nucleotidase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211464|gb|EEZ77804.1| 5-nucleotidase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 858
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 27/120 (22%), Gaps = 10/120 (8%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC-NQLKNDSSQHDGQIQNDISG 112
P + AP + P + +PS + T + G +
Sbjct: 625 GGSAQPTASPSSAAPGAPSTPPSTAAPGAPSTSPSGTAAPTATGSAKPTPSGNPSDGGKP 684
Query: 113 KTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ S + G +K T P+ + A R
Sbjct: 685 SASSKPSSTSAPSATAKPSGTVKPSGTAKPG---------GPTASPSATVKPSATAEAPR 735
>gi|239941107|ref|ZP_04693044.1| putative aspartate aminotransferase [Streptomyces roseosporus NRRL
15998]
gi|239987586|ref|ZP_04708250.1| putative aspartate aminotransferase [Streptomyces roseosporus NRRL
11379]
gi|291444548|ref|ZP_06583938.1| glutamine-scyllo-inositol transaminase [Streptomyces roseosporus
NRRL 15998]
gi|291347495|gb|EFE74399.1| glutamine-scyllo-inositol transaminase [Streptomyces roseosporus
NRRL 15998]
Length = 372
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 55/330 (16%), Positives = 96/330 (29%), Gaps = 64/330 (19%)
Query: 90 TVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKEL----- 144
V + + VV P + + + + I
Sbjct: 8 QVPVASPVIGEAEIDAVVQVLRSGNVVQGPEVAAFEERFSALVDGRICVAVNSGTSALHL 67
Query: 145 -LAKNKVGREDTEVPAMDKNFCSNASGARI--AIVV------SGLGISQTGTQRAINLLP 195
L +GR D EV +F ++A+ R+ A VV G G+ + AI
Sbjct: 68 LLLALGIGRGD-EVVVPSFSFAASANAVRLTGADVVFADIEPDGFGLDPAAVEAAIT--- 123
Query: 196 ANITLAFAS-----NGNSLDRWMKEAKKKG----------QEAILQ-IPMQAFDES---- 235
T A + ++DR A+++G A L P+ AF
Sbjct: 124 -PRTAAIMPVHLYGHPAAMDRLTPIAERRGLAVVEDACQAHTAALHGTPVGAFGAGGAFS 182
Query: 236 -YNEDDSYTLKVTQ---TVQQLLNRLRYSLRRGTGYFGVMNYRGA--MLLSNKESAEVI- 288
Y + + L+ +L +R +G GA + + +
Sbjct: 183 FYPTKNMHALEGGMVTTADPELARTVRLLRNQGMEQRYANEIVGANMRMTDVSAAVGRVQ 242
Query: 289 FKEF------AKRGLLFFDDG-SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKL 341
+ + DD ++P +A +Y +IR
Sbjct: 243 LGRLAAWTERRRANAAYLDDHITAPAVTVPPVAEGA------RHVY---HQYTVRIRG-- 291
Query: 342 KGLEEIARTTGQAIGVAVAFDESIEVISQW 371
+AR TG IG AV + I + +
Sbjct: 292 DRDAAMARLTGAGIGNAVYYPTPIHRLKPY 321
>gi|167550989|ref|ZP_02344745.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168231475|ref|ZP_02656533.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168261077|ref|ZP_02683050.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|194471215|ref|ZP_03077199.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197262082|ref|ZP_03162156.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|200389464|ref|ZP_03216075.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|224582321|ref|YP_002636119.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|194457579|gb|EDX46418.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197240337|gb|EDY22957.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|199601909|gb|EDZ00455.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205324245|gb|EDZ12084.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205334143|gb|EDZ20907.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205349826|gb|EDZ36457.1| DNA polymerase III, tau subunit [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|224466848|gb|ACN44678.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|320084759|emb|CBY94549.1| DNA polymerase III, tau and gamma subunits [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 642
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|225556442|gb|EEH04730.1| WSC domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 550
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 8/105 (7%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLP 129
P P + + K + N+ D + +D G NKP D+ P
Sbjct: 380 PGNKPPTDDKPGN--KPPTDDKGNKPPTDDKPGNKPPTDDKPG----NKPPTDDKPDNEP 433
Query: 130 TIEERLILGLSKKELLA--KNKVGREDTEVPAMDKNFCSNASGAR 172
+E ++ + G +TE+P +
Sbjct: 434 PTDETPGNQPPPEDHEPGCETPTGYPETELPTPTNPPVVKPVDPQ 478
>gi|253753057|ref|YP_003026197.1| surface-anchored protein [Streptococcus suis P1/7]
gi|253754880|ref|YP_003028020.1| surface-anchored protein [Streptococcus suis BM407]
gi|251817344|emb|CAZ55076.1| putative surface-anchored protein [Streptococcus suis BM407]
gi|251819302|emb|CAR44630.1| putative surface-anchored protein [Streptococcus suis P1/7]
Length = 765
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 30/123 (24%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
S AP + + +P D + S + Q +
Sbjct: 432 PEAPESPTEEPKKEDAPAPSTPEKQPEVPESPNPETPDAPSTPKDEPQVPSIPEEQPKET 491
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+ + + T T EE + + + ++T P + K
Sbjct: 492 PAPEEPKKEDTPQTPQAPSTPKEEAPKEEVPTPPAPSVPEEQPKETPTPEVPKQEDVQPE 551
Query: 170 GAR 172
+
Sbjct: 552 APK 554
>gi|332298588|ref|YP_004440510.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
brennaborense DSM 12168]
gi|332181691|gb|AEE17379.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
brennaborense DSM 12168]
Length = 987
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 40/139 (28%), Gaps = 16/139 (11%)
Query: 46 ISHAFVGTISEMIPYSVIREIAP--IPLTIPLNIED----KQSPSKRDNNTVCNQLKNDS 99
+ + R+ P P P E + +P + +T + +
Sbjct: 665 FNAEPYAAEPRTPEPARYRDPEPAFPPAPKPCPSESSVPERPAPLRPRPDTNTDSVPPFD 724
Query: 100 SQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
Q + P +++ + +P E + + L+ + + D PA
Sbjct: 725 RQ----PEPPFEPSV----PQSASADEPVPAAEPEPLA--EPESLVEQEPLAESDIPEPA 774
Query: 160 MDKNFCSNASGARIAIVVS 178
+ + + A +
Sbjct: 775 PSEPVPAEDTSPEPAPISD 793
>gi|301782045|ref|XP_002926450.1| PREDICTED: hypothetical protein LOC100478689 [Ailuropoda
melanoleuca]
Length = 976
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 44/176 (25%), Gaps = 10/176 (5%)
Query: 10 RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAF-VGTISEMIPYSVIREIAP 68
K K + SQ L FI+ S + A T + P +
Sbjct: 403 GKAGQKEQLPRSQKTPSTRAASLKVPFILDQSKKVSAVRAPSQKTSTAPGPTRRAPAVPA 462
Query: 69 IPLTIPLN--IEDKQSPSKRDNNTVC---NQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
P P+ + P+ + + + P S
Sbjct: 463 APQKTPVARGPSRRAPPAPTTSPKAPAVHGTARKAPPASAVSRKAVAVPAPSRKAPPVSA 522
Query: 124 SIDSLPTIE----ERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI 175
P I + + + ++ R+ +P + ++ ++ +
Sbjct: 523 GAQKPPAISAPSHKAPPILALPPKPVSPPLRRRKSLFIPTPSQKAVTSPPQPKMTL 578
>gi|299115390|emb|CBN74219.1| PR1-like metalloprotease [Ectocarpus siliculosus]
Length = 702
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 43/163 (26%), Gaps = 12/163 (7%)
Query: 15 KRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIP 74
R+ + ++LG + C + ++ ++ +G + I E +P+
Sbjct: 194 ARRMLW-ASTAKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPT---AIEEEVGLPVQSE 249
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQ--------HDGQIQNDISGKTVVNKPTRSTSID 126
+ P T Q + P S +
Sbjct: 250 EECQQVAPPDTPSPGTTPAPAATTPPPSTGEEPIPTTAQPLPVTLPPSFPTSPPVSETDP 309
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
P E ++ + A K E T P + + A
Sbjct: 310 PSPEPEPSTRAPVTPEPTPAPVKPEPEPTPAPVKPEPEPTPAP 352
>gi|292491772|ref|YP_003527211.1| ATPase P [Nitrosococcus halophilus Nc4]
gi|291580367|gb|ADE14824.1| copper-translocating P-type ATPase [Nitrosococcus halophilus Nc4]
Length = 928
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 46/174 (26%), Gaps = 21/174 (12%)
Query: 12 KTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPL 71
P R+S Y ++ +FL+ + G+ +++ + + AP P
Sbjct: 724 PAPARESKYQWVVPATVIFLMAAVLVGGI-LWVQLGGKIKEETPTVAEAEKETPAAPQPT 782
Query: 72 T-----------IPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPT 120
P + E P K L + + V P
Sbjct: 783 EPLPSGETSIARAPPSEEVAPPPKKPAEVAQPPTLPEKAPEKPEAP--------VEKTPV 834
Query: 121 RSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
S +EE S K + E S + +RIA
Sbjct: 835 TPPSERPRKKVEEVAPAPPSTPAAKEKPEK-VEVAPATPKTVTVQSGDTLSRIA 887
>gi|301110777|ref|XP_002904468.1| mucin-like protein [Phytophthora infestans T30-4]
gi|262095785|gb|EEY53837.1| mucin-like protein [Phytophthora infestans T30-4]
Length = 1445
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 1/120 (0%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIP-LTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQ 105
S S ++P+ L P DK +PS + D+
Sbjct: 145 SSTPATEAPTPESPSSNSILSPVTNLLTPAPAPDKDAPSTPTATQAPSTPATDAPSLLSP 204
Query: 106 IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFC 165
+ N ++ + P+ T+ ++ + L + A + D P
Sbjct: 205 VTNLLTPAPDTDAPSAPTATEAPSILSPVTNLLTLAPDTDAPSAPTATDAPSPPETDAPS 264
>gi|225022433|ref|ZP_03711625.1| hypothetical protein CORMATOL_02473 [Corynebacterium matruchotii
ATCC 33806]
gi|224944790|gb|EEG25999.1| hypothetical protein CORMATOL_02473 [Corynebacterium matruchotii
ATCC 33806]
Length = 578
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 23/123 (18%), Gaps = 14/123 (11%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
T + P + P P SP + SQ
Sbjct: 30 RITPAAQQPAKGSKSAKAKPAVRPTKAAQSSSPQSAGAGRPAKRTVRKVSQQPAD----- 84
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ + R G + V E PA A
Sbjct: 85 ---------AAPATPKGPRVRKPRPAKGTKPTQPTPATPVASEQPAKPAKPTKPAKPAKQ 135
Query: 171 ARI 173
R+
Sbjct: 136 PRV 138
>gi|171686102|ref|XP_001907992.1| hypothetical protein [Podospora anserina S mat+]
gi|170943012|emb|CAP68665.1| unnamed protein product [Podospora anserina S mat+]
Length = 849
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 9/122 (7%)
Query: 53 TISEMIPYSVIREIAPIPLTIP-LNIEDKQSPSKRDNNTVCNQLKNDSSQHD-GQIQNDI 110
+ S P I + AP P + P+ + +T + ++
Sbjct: 267 SDSAKEPEDTIMQGAPPIEETPAPSGSTTSDPAPKTGSTWAFWSRQSGPTSGKKSAEDSD 326
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
G+ V + ++E + G KE + E PA D + S+ +G
Sbjct: 327 EGQLAVMGESSEHRPKRAKSMEFK---GSPPKE----TPIKSGKKEEPAKDLSIKSDKTG 379
Query: 171 AR 172
+
Sbjct: 380 KK 381
>gi|296482467|gb|DAA24582.1| mitochondrial inner membrane protein [Bos taurus]
Length = 749
Score = 36.6 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 47/171 (27%), Gaps = 5/171 (2%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P R+ + S S L I G +Y F + + IPYS ++
Sbjct: 28 RPCRRYSTSGSSRLSASKIAGAGILFVGGGIGGTILYAKWDSHFRKNVEKTIPYS--DKL 85
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKND--SSQHDGQIQNDISGKTVVNKPTRSTS 124
+ L P + + + S+ G T + T
Sbjct: 86 FEMVLGSPPYTVPLPKKPIQSGPLKISSVSEVMKESKQPASQPQKQKGDTSASTTAGDTL 145
Query: 125 IDSLPTIE-ERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
P ++ E LI + K K + + AR+A
Sbjct: 146 SVPAPVVQHEELIKTDHPETGEGKPKPATSEEASSTSVRERPPEEVAARLA 196
>gi|332255389|ref|XP_003276814.1| PREDICTED: bile salt-activated lipase [Nomascus leucogenys]
Length = 698
Score = 36.6 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 37/142 (26%), Gaps = 17/142 (11%)
Query: 54 ISEMIPYSVIREIAPIP-------LTIPLNIEDKQSPSKRDNNTVCNQLK--NDSSQHDG 104
+ +P + AP+P +P + P ++ + DS
Sbjct: 556 EATPVPPTGDSGAAPVPPTGDSGAAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAAPV 615
Query: 105 QIQNDISGKTVV------NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRED--TE 156
D V P T P + G + ++ +
Sbjct: 616 PPTGDSGAPPVPPTGDSGAAPVPPTGDSGAPPVPPTGDSGAAPVPPTGDSEAAPVPPTGD 675
Query: 157 VPAMDKNFCSNASGARIAIVVS 178
A ++ A++ V+S
Sbjct: 676 SEAAPVPPTDDSKEAQMPAVIS 697
>gi|291414885|ref|XP_002723684.1| PREDICTED: zinc finger protein 828 [Oryctolagus cuniculus]
Length = 810
Score = 36.6 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 50/173 (28%), Gaps = 10/173 (5%)
Query: 1 MSIDLNHPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPY 60
+S DL PL P + + S + + G L + L + + ++
Sbjct: 164 VSPDLQTPLPSPEPSKPAPVSSELPKSGPVLESQKPVPSPEPQKLAPLSPELVKAPLVNP 223
Query: 61 SVIREIAPIPLTIPLNIEDKQSP--SKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
+ P + +SP + + + S+ Q T +
Sbjct: 224 KSQKHTHFPETLGPPSALSPESPVLAASPEPWGPSPTASPESRKPAQ--------TASPE 275
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
P + + +S + + + G P + + S+ S A
Sbjct: 276 PRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSSPSAA 328
>gi|149633241|ref|XP_001508521.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
Length = 1076
Score = 36.6 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 41/158 (25%), Gaps = 11/158 (6%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN--DSSQHDGQIQNDISGKTVVNK 118
P ++P ++SP+ D + + ++ +G +
Sbjct: 392 PSTGGADPEAPSVPSGGRSEESPAAPDPEAAGGPGPDGPADAVVGAGGESPAAGGRIPAA 451
Query: 119 PTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAI--- 175
P S P EER R+ + M + I I
Sbjct: 452 PGPRDSTGGSPRSEERGGF-----PAAGPPGAARDGGFIQLMPATGAAFGGSGNILIATC 506
Query: 176 VVSGLGISQTGTQRAINLLPAN-ITLAFASNGNSLDRW 212
V + G Q + +LP LA R
Sbjct: 507 VTDPAALGTAGVQSNVVVLPGGSAPLASQPPAPQPLRT 544
>gi|169599679|ref|XP_001793262.1| hypothetical protein SNOG_02663 [Phaeosphaeria nodorum SN15]
gi|160705295|gb|EAT89394.2| hypothetical protein SNOG_02663 [Phaeosphaeria nodorum SN15]
Length = 799
Score = 36.6 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 27/118 (22%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P AP P DK +P+ + + G + SG
Sbjct: 3 PTPTPTSSHQAPAPPPTTSTARDKTAPTAAGPESASTAPMKHQTTLAGARSRNASGTPSP 62
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
P S + + ++ + + + A+ A
Sbjct: 63 KSPLSSRDASPARPHQRAAPAAAANPRAGLRSPRAADPGPAGSKISPSATPIPRAQSA 120
>gi|300780379|ref|ZP_07090235.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300534489|gb|EFK55548.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 426
Score = 36.6 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 28/116 (24%), Gaps = 3/116 (2%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
E + AP P + PS + G ++ D + +
Sbjct: 309 ESAEPTTSSTDAPTTAPTPPDSSTPSEPSTAPPPSSAATPTTTD--SSGNVETDTAPSKL 366
Query: 116 VNKPTRSTSIDSLPTIEERLILG-LSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
T + S P G A + GR + ++ +
Sbjct: 367 PLPVTYPSESPSAPAYGRPNSEGARPSGPPTAPSAEGRRPIQSVPSGATALTDPTA 422
>gi|325291893|ref|YP_004277757.1| acetyl-CoA C-acyltransferase protein [Agrobacterium sp. H13-3]
gi|325059746|gb|ADY63437.1| acetyl-CoA C-acyltransferase protein [Agrobacterium sp. H13-3]
Length = 402
Score = 36.6 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 12/91 (13%)
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRD--KIREKLKGLEEIART----TGQAIGV 357
+ P ++T L K + DL+ +++ + + +I+ G AI +
Sbjct: 300 TGPVDVTEKLLKKTGMSLADIDLF---ELNEAFAAVVLRYMQAFDISHERMNVNGGAIAM 356
Query: 358 AVAFDESIE-VISQWLQQEHVRDV--SVVPL 385
+ ++ L + RD+ ++V L
Sbjct: 357 GHPLGATGAMILGTVLDELERRDLNTALVTL 387
>gi|83595110|ref|YP_428862.1| translation initiation factor IF-2 [Rhodospirillum rubrum ATCC
11170]
gi|83578024|gb|ABC24575.1| bacterial translation initiation factor 2 (bIF-2) [Rhodospirillum
rubrum ATCC 11170]
Length = 873
Score = 36.6 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 34/320 (10%), Positives = 85/320 (26%), Gaps = 59/320 (18%)
Query: 75 LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEER 134
+ P+ + + + + ++D + K V ++ +E +
Sbjct: 184 PGPDASARPAA-EAPRSPTEAPRPGPRRVVEDEDDDAPKKVASRGAVPPKPAPAKRVEPK 242
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL 194
L+ L ++ V A+ + A + + +R + +
Sbjct: 243 RRGKLTVTAALEGDERSERGRSVAALRRAKQKEKRKAEM----------MSPAERVVREV 292
Query: 195 PANITLAFASNGNSLDRWMKEAKKKGQEA---ILQIPMQAFDESYNEDDSYTLKVTQ--- 248
+ ++ ++G ++++ + A + D+ L V +
Sbjct: 293 -------IIPDVINVQELANRMAERGANVIKTLMKMGVMATINQTIDADTAELVVAEFGH 345
Query: 249 -----TVQQLLNRLRYSLRRG-------TGYFGVMNYRGAMLLSNKESAEV--------- 287
+ + L +L G VM + S ++
Sbjct: 346 ASRRVSDSDVELGLGDALPDGTEVLTSRPPVVTVMGHVDHGKTSLLDAMRKTDVAGGEAG 405
Query: 288 -------IFKEFAKRG--LLFFDDGSSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIR 338
++ K G + F D +P + D+ + D I
Sbjct: 406 GITQHIGAYQVVTKSGQKITFID---TPGHAAFTAMRARGARVT--DIVVLVVAANDGIM 460
Query: 339 EKLKGLEEIARTTGQAIGVA 358
+ AR + VA
Sbjct: 461 PQTIEAIRHARAAEVPVVVA 480
>gi|322418690|ref|YP_004197913.1| translation initiation factor IF-2 [Geobacter sp. M18]
gi|320125077|gb|ADW12637.1| translation initiation factor IF-2 [Geobacter sp. M18]
Length = 970
Score = 36.6 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 6/121 (4%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+ + R PIP P + Q P++ + + + + G
Sbjct: 216 TATRARILGRVEIPIPAQRPAERREYQRPAQGERPAPRPGMPRGVERPGTERPAPRPGAG 275
Query: 115 VVNKPTRSTSIDSLP----TIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
+ P + + LL + GR+ PA +F NA
Sbjct: 276 RPGERPAPGRPGERPTGPRPDRPAPLTPIEPPPLLDDRRKGRKP--APAGGADFGKNAKK 333
Query: 171 A 171
Sbjct: 334 G 334
>gi|332860584|ref|XP_001139533.2| PREDICTED: hypothetical protein LOC740491 [Pan troglodytes]
Length = 565
Score = 36.6 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 10/109 (9%), Positives = 28/109 (25%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
IP + P + ++ P+ + + Q + + + +
Sbjct: 262 PHNIPPVSRQASTPTSVPDTPRGSIQEPPAPSNPFQLPTQGHSKPNNSRRVSVQGSAPLS 321
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKN 163
V + P S + P + + + ++ P
Sbjct: 322 VPSSPRVSAETSAPPLGAPGVSAKGFAPPTVPGSPRVSKEGSAPPPGSP 370
>gi|331284120|ref|NP_001193562.1| proteoglycan 4 [Bos taurus]
Length = 1195
Score = 36.6 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 21/115 (18%), Gaps = 6/115 (5%)
Query: 59 PYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNK 118
P P P T P E + K + S + K
Sbjct: 494 PAPTTTTKEPAPTTTP--KEPAPTDPKEPAPAEPKEPAPTSPKEPAPTTTTKEPAPAEPK 551
Query: 119 PTRSTSIDSLPT----IEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
TS E K T+ PA A
Sbjct: 552 EPAPTSPKEPAPTTTTKEPAPAEPKEPAPTSPKEPAPTTTTKEPAPTTTPKEPAP 606
>gi|323450661|gb|EGB06541.1| hypothetical protein AURANDRAFT_71984 [Aureococcus anophagefferens]
Length = 1532
Score = 36.6 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 54/192 (28%), Gaps = 24/192 (12%)
Query: 4 DLNHPLRKKTPKRKSFYSQIISRLGLFLLFCT--------------FIVGLSIYILISHA 49
D L++ P + + + ++ F V L ++ H
Sbjct: 687 DTYARLQRSDPPAPTPWVRGFTKFQAVARGALLRVVRRRYGAHETPFGVELEKFLPPEHG 746
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
+G P R+ + + +++ ++ T + + G++
Sbjct: 747 PLGATPARSPRGTPRQPSRTLAEHRRALAEQRRAAQPPPRTGVGNMGTFAPPRTGKVSKG 806
Query: 110 ISGKTVVNKP----TRSTSIDSLPTIEERLILGLSKK------ELLAKNKVGREDTEVPA 159
+ S L ++ R G ++ L ++ R+D +V
Sbjct: 807 ALIAAHRGAYNADVSPSRFGGPLDILDCRDDQGSKRERNSQLQRLRSRPFSTRDDGDVDF 866
Query: 160 MDKNFCSNASGA 171
S A A
Sbjct: 867 RSHRVASTAPRA 878
>gi|259503617|ref|ZP_05746519.1| dephospho-CoA kinase [Lactobacillus antri DSM 16041]
gi|259168441|gb|EEW52936.1| dephospho-CoA kinase [Lactobacillus antri DSM 16041]
Length = 197
Score = 36.6 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 301 DDGSSPRNLTRVLAP-KLNLPYMVADLYLDDQVDRDKIREKLKGLEE 346
DD S P R+ A L AD+ +D+ D + +R ++ L +
Sbjct: 148 DDLSRPAAQARIAAQLPLAAKLARADVVIDNNGDYNHLRRQVAQLVK 194
>gi|308497042|ref|XP_003110708.1| CRE-KLP-7 protein [Caenorhabditis remanei]
gi|308242588|gb|EFO86540.1| CRE-KLP-7 protein [Caenorhabditis remanei]
Length = 719
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 33/116 (28%), Gaps = 1/116 (0%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
P + + T P +++PS + S N S +
Sbjct: 136 RAPSPTEKMASTRRATSPTERAVRRAPSPKTEKFAVPAAPKAPSARSVLAPNVNSSSKLE 195
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ PT + + +P R + + + V P+ S +G R
Sbjct: 196 SHPTVTPAPAEVPKQTSRRSV-MPQPAAPPPAPVNMNTQRAPSPVARAPSPKNGPR 250
>gi|307107915|gb|EFN56156.1| hypothetical protein CHLNCDRAFT_144838 [Chlorella variabilis]
Length = 861
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 24/99 (24%)
Query: 63 IREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRS 122
+ E++P+P P E +P+ + DS + P
Sbjct: 407 VEELSPVPEPQPTPSESPTTPATPVEELSPSPALPDSPPPTDPPASPAEESPAAPLPESP 466
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
P ++ + G T D
Sbjct: 467 APPSDSPAATPPPAEEEPQQPAASPAPTGGYGTPAEPGD 505
>gi|149635094|ref|XP_001510508.1| PREDICTED: similar to fetal Alzheimer antigen [Ornithorhynchus
anatinus]
Length = 2805
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 30/124 (24%), Gaps = 5/124 (4%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
P + P Q + Q + + S T
Sbjct: 2135 PPAQPPIQSQPQTQSPAPTQTAQSSAQPQAPTQAPQPPGQSEVQAQAEAQAQATVPSPDT 2194
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNK-----VGREDTEVPAMDKNFCSNAS 169
+P+ + + E+ G + ++ +EVPA +S
Sbjct: 2195 SEPQPSLTQTTKPQTGEEQPPSQGQGQSPAGGQSPPQTNIHPPTPSEVPAAQAAQVPTSS 2254
Query: 170 GARI 173
++
Sbjct: 2255 PPQV 2258
>gi|324501424|gb|ADY40635.1| Cell division cycle and apoptosis regulator protein 1 [Ascaris
suum]
Length = 1199
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 32/133 (24%), Gaps = 11/133 (8%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQ----SPSKRDNNTVCNQLK----NDSSQ 101
G P R+ AP+P P + S + T N++ +
Sbjct: 161 PHGHPMHSTPDMRGRQPAPLPRGGPTMGQSWPDKGVSNAGPGPATRANEIHARESRAMPR 220
Query: 102 HDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD 161
+ P S + + + ++ R
Sbjct: 221 SRSPVPAMTRRG---RSPPPSVGNGGGRRVSPPARRASPPRGVARRSPPKRSPARSDFSR 277
Query: 162 KNFCSNASGARIA 174
+ AS RI+
Sbjct: 278 SSTARAASPKRIS 290
>gi|301785003|ref|XP_002927927.1| PREDICTED: LOW QUALITY PROTEIN: pleckstrin homology-like domain
family B member 1-like [Ailuropoda melanoleuca]
Length = 1434
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 55/258 (21%), Gaps = 39/258 (15%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
+ + C +G S ++ +H + + + R P E +
Sbjct: 164 PVRQPTRLTQGCMLCLGQSTFLRFNHPAEAKWMKSMIPAGGRAPGPPYSPGSAESESLVN 223
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQ----NDISGKTVVNKP----TRSTSIDSLPTIEER 134
+ S +I V+ +P + + L +
Sbjct: 224 GNHTPQPATRGPPACASHSSLVSSIEKDLQEIMDSLVLEEPGAAGKKPAATSPLSPMANG 283
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLL 194
LS VG S AS A G Q +
Sbjct: 284 GRYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSGSCA-------SHSPGGQEPAPSM 336
Query: 195 PANIT-------LAFASN-----GNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSY 242
P + LA G + +K G E
Sbjct: 337 PPLVPARSSSYHLALQPPQSRPSGARASESPRLGRKGGHE------------RPPSPGLR 384
Query: 243 TLKVTQTVQQLLNRLRYS 260
L +L R +
Sbjct: 385 GLLTDSPAATVLAEARRA 402
>gi|62179095|ref|YP_215512.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|62126728|gb|AAX64431.1| DNA polymerase III, tau and gamma subunits; DNA elongation factor
III [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322713556|gb|EFZ05127.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
Length = 642
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNHSALERLASVSERVQARPAPSALETAPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|289740919|gb|ADD19207.1| daxx-interacting protein MSP58/p78 [Glossina morsitans morsitans]
Length = 507
Score = 36.6 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 59/203 (29%), Gaps = 29/203 (14%)
Query: 43 YILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDS--- 99
Y + G S + + P P+ N+ + S
Sbjct: 51 YSITPQQSRGDQSRAGRPRTTSQTY-VQPIQPPPPMPVLQPAASTTNSSITGSLDASSNL 109
Query: 100 SQHDGQIQ--NDISGKTVVNKPTRSTSID---SLPTIEERLILGLSKKELLAKN-KVGRE 153
+ G + ++ P D + P++E+R + K K GR
Sbjct: 110 DKVTTNPVLSGGNVGNSTMSSPHAPVITDRSTTFPSLEKRR----PPRSHQKKTKKTGRP 165
Query: 154 DTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAI---NLLPANITLAFAS------ 204
++VP D +A+++ GI QT R + TL+
Sbjct: 166 PSQVPTKDLGRWKPIDD--LALII---GILQTNDLRIVHRGTKFSCKFTLSELQARWFSL 220
Query: 205 -NGNSLDRWMKEAKKKGQEAILQ 226
++ R A + +++
Sbjct: 221 LYEPAISRIAVAAMRNLHPELVE 243
>gi|168699596|ref|ZP_02731873.1| ribonuclease E [Gemmata obscuriglobus UQM 2246]
Length = 987
Score = 36.6 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 6/116 (5%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
V+++ AP+ + + + + I +G+ V
Sbjct: 237 AAHTPVVKKPAPVEVEEDEFGAGIVDADVPPAPAAKREPEAAPPEVAKAIDALDAGEPV- 295
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
P + P + E K + + + E PA ++ + R
Sbjct: 296 -APVEPPEVSPAPEVTEAPEPEAKKP----RARRTKPKVEEPAAEEPATEAKAKPR 346
>gi|227505431|ref|ZP_03935480.1| lactam utilization protein B [Corynebacterium striatum ATCC 6940]
gi|227197974|gb|EEI78022.1| lactam utilization protein B [Corynebacterium striatum ATCC 6940]
Length = 253
Score = 36.6 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 30/112 (26%), Gaps = 15/112 (13%)
Query: 279 LSNKESAEVIFKEFA-KRGLLFFDDGSSPRNLTRVLAPKLNL----------PYMVADLY 327
+++ + + G D S + A + + P +
Sbjct: 21 VADDAAMLKLVSSANVATGFHAGDPHSIAGTV--HAAKEAGVVVGAHVGYNDPAAFGRRF 78
Query: 328 LDDQVDR--DKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHV 377
+D D++ ++ LE +AR G + I Q
Sbjct: 79 IDYNPAELADEVTYQIGALEALARAHGTRVAYVKPHGAMYNAIVHHEAQAKA 130
>gi|170284751|gb|AAI61419.1| LOC100145651 protein [Xenopus (Silurana) tropicalis]
Length = 715
Score = 36.6 bits (83), Expect = 7.5, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 27/105 (25%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
A P + D P ++ ++ L + G+ P+
Sbjct: 151 ASPPCRKRHDSSDPSPPPRKRQDSSDKSLPRRGRHNSTDPSPPRRGRHASPNPSPPRRGR 210
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
G + + GR D+ P+ + ++
Sbjct: 211 HASPGPSPPRRGRHASPGPSPPQRGRHDSPDPSPPRRGRHDSPDP 255
>gi|320102740|ref|YP_004178331.1| Paraquat-inducible protein A [Isosphaera pallida ATCC 43644]
gi|319750022|gb|ADV61782.1| Paraquat-inducible protein A [Isosphaera pallida ATCC 43644]
Length = 892
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 1/98 (1%)
Query: 29 LFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDN 88
+ F F+V LS+ + + G + P P P+ +
Sbjct: 216 GLIAFGLFVV-LSLAVGLVFDPHGLWETPWMPLSPQRDEPSPSAATDLRSKPSPPAAPAS 274
Query: 89 NTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
++ ++ + T KP + S D
Sbjct: 275 DSSSLFNVRTAAATPATPLGVAAPDTGQVKPAPAPSAD 312
>gi|325096169|gb|EGC49479.1| pheromone-regulated membrane protein [Ajellomyces capsulatus H88]
Length = 605
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 29/121 (23%), Gaps = 8/121 (6%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQ-HDGQIQNDIS 111
+ + R+ P L + + D+ SP + + +
Sbjct: 450 DRGPPVLPPIERQGTPPSLMVGPRLHDRPSPLSDQEFSFPPPMPAIGGRASPVNRSQMSP 509
Query: 112 GK----TVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
+ + P + P + + G P +NF S
Sbjct: 510 PPPRTYSPLLTPASNRGYQGFPAP-PGPRTPAPRTPIPQPPARGMTPGLPP--VRNFTSP 566
Query: 168 A 168
A
Sbjct: 567 A 567
>gi|308468744|ref|XP_003096613.1| hypothetical protein CRE_01249 [Caenorhabditis remanei]
gi|308242485|gb|EFO86437.1| hypothetical protein CRE_01249 [Caenorhabditis remanei]
Length = 666
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 5/122 (4%)
Query: 57 MIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQ-NDISGKTV 115
P V+ + API + S + + N + + + ++ + +
Sbjct: 405 AKPTPVVTKPAPITAKPAPVVTKSYSVATKPAPVAANPPEATPKRRESMVETQRVIPREP 464
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV----PAMDKNFCSNASGA 171
+P + + + G ++E + + + V PA +N S
Sbjct: 465 SPEPEEEPEEEDANRSVDVMDQGEDQEEDVEPMETEEQPDVVIPPSPAPHENVDIKPSAP 524
Query: 172 RI 173
+
Sbjct: 525 EV 526
>gi|126098563|gb|ABN79386.1| type III neuregulin 1 [Mus musculus]
Length = 222
Score = 36.6 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 6/151 (3%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
I+ L + C I GL ++ + F + + + P+ P
Sbjct: 78 IVPILACLVSLCLCIAGLK-WVFVDKIFEYDSPTHLDPGGLGQD-PVISLDPTAASAVLV 135
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKK 142
S+ + V + GQ + PTR + + P +
Sbjct: 136 SSEAYTSPVSKAQSEAEAHVTGQGDHVAVASEPSAVPTRKNRLSAFPPLHSTP----PPF 191
Query: 143 ELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
A+ R + + ++
Sbjct: 192 PSPARTPEVRTPKSGTQPQTTETNLQTAPKL 222
>gi|326778211|ref|ZP_08237476.1| hypothetical protein SACT1_4060 [Streptomyces cf. griseus
XylebKG-1]
gi|326658544|gb|EGE43390.1| hypothetical protein SACT1_4060 [Streptomyces cf. griseus
XylebKG-1]
Length = 194
Score = 36.6 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%)
Query: 45 LISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG 104
L S A G +PY + +P +++P+ + ++
Sbjct: 9 LWSRATRGRRLLRVPYGRGTVESMSFDELPATGAVRRAPAGPPGSRASGTIERAEPSRSA 68
Query: 105 QIQNDI 110
+ +
Sbjct: 69 EPIELL 74
>gi|17552520|ref|NP_497778.1| hypothetical protein C36A4.5 [Caenorhabditis elegans]
gi|3874739|emb|CAA91271.1| C. elegans protein C36A4.5, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 954
Score = 36.6 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 22/210 (10%), Positives = 52/210 (24%), Gaps = 16/210 (7%)
Query: 51 VGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
I + + AP P ++ +S I+ I
Sbjct: 335 RPAIPAVSAPRALTSRAPTGPACPTTTRSAAPATRTAVPPRATAPPKAASASKAPIRAPI 394
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERL-ILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
K+ P + + + + + G ++ +K + A + A+
Sbjct: 395 PAKSAPAPPRGAPAKAAKAEAIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAPAT 454
Query: 170 GAR--------IAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQ 221
+ IV+ + N A + + R + +
Sbjct: 455 APEASRRDPSDVTIVLDD-----SLFPEDFNQGSAPMDIVVIPPTPEPPRLEEARATHPK 509
Query: 222 EAILQIPMQAFDESYNEDDSYTLKVTQTVQ 251
E I+ + ++ E D +
Sbjct: 510 EPIVDA--EDLAKAPQEVDDVANLADVEDE 537
>gi|186471439|ref|YP_001862757.1| LysR family transcriptional regulator [Burkholderia phymatum
STM815]
gi|184197748|gb|ACC75711.1| transcriptional regulator, LysR family [Burkholderia phymatum
STM815]
Length = 294
Score = 36.6 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 35/86 (40%)
Query: 307 RNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIE 366
R R A L L D + + I+ +++GLE AR +A +++E
Sbjct: 55 RGQVRPSAIGEVLVERARRLLADAEQTLEDIQRQVQGLEGRARLGASTGAIAHLLPQALE 114
Query: 367 VISQWLQQEHVRDVSVVPLSCLAKLS 392
V+ Q ++ + L++L+
Sbjct: 115 VLRQHHPAIDIQIAVLTSQETLSRLA 140
>gi|304321623|ref|YP_003855266.1| hypothetical protein PB2503_10364 [Parvularcula bermudensis
HTCC2503]
gi|303300525|gb|ADM10124.1| hypothetical protein PB2503_10364 [Parvularcula bermudensis
HTCC2503]
Length = 875
Score = 36.6 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 38/140 (27%), Gaps = 21/140 (15%)
Query: 79 DKQSPSKRDNNTVCNQLKNDSSQHDGQIQN-DISGKTVVNKPTRSTSIDSLPTIEERLIL 137
+ + L Q +N D++G V + + ++
Sbjct: 226 TADPTAPTPPRRLTLPLAEFPGQSIVIFENPDVTGDMVTSASASPNADGPGF----QVNF 281
Query: 138 GLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPAN 197
G + V RE+ G + AIV+ IS Q AI
Sbjct: 282 GFDNRGARRFGNVTRENI--------------GRQFAIVLDDTVISAPRIQSAITGGSGR 327
Query: 198 ITLAFASNGNSLDRWMKEAK 217
IT +F+ +
Sbjct: 328 ITGSFSP--EEAQELAVLIR 345
>gi|327490530|gb|EGF22311.1| subtilisin family serine protease [Streptococcus sanguinis SK1058]
Length = 1505
Score = 36.2 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 14/138 (10%), Positives = 37/138 (26%), Gaps = 13/138 (9%)
Query: 54 ISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSS-----QHDGQIQN 108
++ I + + + ++ + E PS + + + +
Sbjct: 65 ETQPISPATVEKAPASSESVASSTEQASQPSTAEAKEAAAAPVEKGATSSSEEASSSAEK 124
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA-------MD 161
KPT S SK + +A++ R+ +
Sbjct: 125 VTQPSATETKPTAPASPTVESPAAANSDKPASKPDAVAESPTSRDAKPSSISTNEIIKVP 184
Query: 162 KNFCSNASG-ARIAIVVS 178
+ + G R+ ++
Sbjct: 185 QTWSQGYKGQGRVVAIID 202
>gi|296216336|ref|XP_002754538.1| PREDICTED: pleckstrin homology-like domain family B member 1
isoform 2 [Callithrix jacchus]
gi|296216338|ref|XP_002754539.1| PREDICTED: pleckstrin homology-like domain family B member 1
isoform 3 [Callithrix jacchus]
Length = 1377
Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 38/157 (24%), Gaps = 8/157 (5%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
+ + C +G S ++ +H + + + R P +P E +
Sbjct: 109 PVRQPTRLTQGCMLCLGQSTFLRFNHPAEAKWMKSMIPAGGRAPGPPYSPVPAESESLVN 168
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQ----NDISGKTVVNKP----TRSTSIDSLPTIEER 134
+ S +I V+ +P + + L +
Sbjct: 169 GNHTPQPATRGPSACASHSSLVSSIEKDLQEIMDSLVLEEPGAAGKKPAATSPLSPMANG 228
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
LS VG S AS
Sbjct: 229 GRYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSG 265
>gi|218660830|ref|ZP_03516760.1| acetyl-CoA acetyltransferase [Rhizobium etli IE4771]
Length = 355
Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGL-EEIAR--TTGQAIGVAVA 360
+ P ++T L + + DL+ ++ + ++ + A+ G AI +
Sbjct: 253 TGPVDVTEKLLKRTGMSLADIDLFELNEAFAAVVLRYMQAFDIDHAKINVNGGAIAMGHP 312
Query: 361 FDESIE-VISQWLQQEHVRDV--SVVPL 385
+ ++ L + RD+ ++V L
Sbjct: 313 LGATGAMILGTVLDELERRDLNTALVTL 340
>gi|218290179|ref|ZP_03494338.1| Glycerate kinase [Alicyclobacillus acidocaldarius LAA1]
gi|218239774|gb|EED06964.1| Glycerate kinase [Alicyclobacillus acidocaldarius LAA1]
Length = 385
Score = 36.2 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 4/125 (3%)
Query: 104 GQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSK-KELLAKNKVGREDTEVPAMDK 162
G +G T V P + + +P +E+ L ++ + L +
Sbjct: 203 GNPLLGPTGATHVFGPQKGAGPEDVPRLEDALAHVAARCEAALGRKAADLPGAGAAGGLG 262
Query: 163 NFCSNASGARIA---IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKK 219
AR++ V+ +G + A+ L T A + G ++ + A+
Sbjct: 263 FALYLLGAARVSGIDFVLDAIGFDRAVQGAALVLTGEGRTDAQTAYGKAVAGVARRARAH 322
Query: 220 GQEAI 224
G
Sbjct: 323 GVPVF 327
>gi|330816584|ref|YP_004360289.1| Transcriptional regulator, RpiR family protein [Burkholderia
gladioli BSR3]
gi|327368977|gb|AEA60333.1| Transcriptional regulator, RpiR family protein [Burkholderia
gladioli BSR3]
Length = 298
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 57/146 (39%), Gaps = 5/146 (3%)
Query: 79 DKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSLPTIEERLILG 138
+ +P + + ++ + ++ + ++ + S+D+ +R +
Sbjct: 96 RRVAPDLSYQSRIRGIIERGGRRKTSELAGEFLEDSIAGMQQLAASLDAAAF--DRAVDL 153
Query: 139 LSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGISQTGTQRAINLLPANI 198
L+ + + V R V +D ++ VSGLG Q G R++ +
Sbjct: 154 LAATDAIWLAGVRRSFPVVAYLDYALQHTGKRIQL---VSGLGGMQAGQLRSLREGEVLL 210
Query: 199 TLAFASNGNSLDRWMKEAKKKGQEAI 224
++FA + +++A ++G + I
Sbjct: 211 AVSFAPYAQETQKIVEDALQRGAKLI 236
>gi|332256172|ref|XP_003277192.1| PREDICTED: hypothetical protein LOC100581111 [Nomascus leucogenys]
Length = 1242
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 28/127 (22%), Gaps = 4/127 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
GT P P P P+ + +
Sbjct: 154 PPGTPMAHPPPPGTPMAHPPPPGTPMVHPPPPGTPMAHPPPPGTPMAHPPPPGTPMAHPP 213
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMD----KNFC 165
G + + P T + P + L+ L+ + P +
Sbjct: 214 PPGTPMAHPPPPGTPMAQPPAPGVLMAQPLTPGVLMVQPAAPGAPMVQPPPAAVMTQPQP 273
Query: 166 SNASGAR 172
S A A+
Sbjct: 274 SGAPMAK 280
>gi|301609671|ref|XP_002934400.1| PREDICTED: collagen alpha-1(XI) chain-like [Xenopus (Silurana)
tropicalis]
Length = 1640
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 23/109 (21%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G P E + L P + P + + + Q +
Sbjct: 1030 PRGLQGMPGPPGEKGESGHVGLMGPPGSSGPRGPQGPSGGEGVHGMPGGTGQPGAVGEKG 1089
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVP 158
G++ T A K GR + P
Sbjct: 1090 EPGESGDPGQTGEQGPPGGKGDVGEKGESGPSGAAGAPGKKGRPGEDGP 1138
>gi|119912968|ref|XP_596546.3| PREDICTED: SH3-domain kinase binding protein 1-like [Bos taurus]
gi|297487542|ref|XP_002696316.1| PREDICTED: SH3-domain kinase binding protein 1-like [Bos taurus]
gi|296475909|gb|DAA18024.1| SH3-domain kinase binding protein 1-like [Bos taurus]
Length = 886
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 29/132 (21%), Gaps = 15/132 (11%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRD-NNTVCNQLKNDSSQHDGQIQN 108
G ++ P P P + + + L+ S Q
Sbjct: 677 PPGEGPGRAQDRTSKQEGPSPKEAPCRAPPRPAKTTDPVPKATPVPLQEASLQRPVVPPR 736
Query: 109 DISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNA 168
+ +R P E VP K F SN+
Sbjct: 737 RPPPPKKTSSSSRPLPEVRGPQRESSEGKAAPAPG---------RALLVPPKAKPFLSNS 787
Query: 169 SGARIAIVVSGL 180
SG + +
Sbjct: 788 SGGQ-----DDM 794
>gi|148657969|ref|YP_001278174.1| laminin G, domain-containing 2 [Roseiflexus sp. RS-1]
gi|148570079|gb|ABQ92224.1| Laminin G, sub domain 2 [Roseiflexus sp. RS-1]
Length = 1159
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 20/72 (27%)
Query: 44 ILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHD 103
+ + F + P P+ Q+P+ + + + +
Sbjct: 894 TVYADDFAFGPVSPTATPTSTSVPPTATNTPVPPTATQTPASPTATSTPSPTASANGALA 953
Query: 104 GQIQNDISGKTV 115
+D +G T
Sbjct: 954 FDGVDDEAGNTA 965
>gi|164662527|ref|XP_001732385.1| hypothetical protein MGL_0160 [Malassezia globosa CBS 7966]
gi|159106288|gb|EDP45171.1| hypothetical protein MGL_0160 [Malassezia globosa CBS 7966]
Length = 828
Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 43/164 (26%), Gaps = 28/164 (17%)
Query: 14 PKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLT- 72
R ++ S R + G S + + + ++ + P
Sbjct: 165 SSRSAWPSTARRRAPILFDTSKPTPGPS-----TQDPLLSTPTRSRRVQVKHMPPTTSPL 219
Query: 73 --------IPLNIEDKQSPSKRDNNTVCNQLKND---------SSQHDGQIQNDISGKTV 115
IP E+ SPSK + SG V
Sbjct: 220 SLTRRKRPIPYVNEEPSSPSKSRSVNAARMTPRAFPRFENTFLPPHPTTNEPVAASGSVV 279
Query: 116 VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
+ R+ + ++P I L + + G T +PA
Sbjct: 280 SERVPRNVPVSAVPLIRPAL-----PQTTPVTERPGSPTTSIPA 318
>gi|302680597|ref|XP_003029980.1| hypothetical protein SCHCODRAFT_77406 [Schizophyllum commune H4-8]
gi|300103671|gb|EFI95077.1| hypothetical protein SCHCODRAFT_77406 [Schizophyllum commune H4-8]
Length = 518
Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 6/103 (5%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRD-----NNTVCNQLKNDSSQHDGQIQNDI 110
P + RE P + K +P+ + +++ + +
Sbjct: 197 AAEPPAPKREEEHASEPQPPTEQKKDTPAVPEPLTIQPPAAAVEIEKAVPTPTLLPEEET 256
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGRE 153
G T S P ++ L + + G E
Sbjct: 257 EGVT-SGAVQPPGSTGETPATDKTAQKDLPPQTTASAPIGGDE 298
>gi|269127808|ref|YP_003301178.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
gi|268312766|gb|ACY99140.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
Length = 637
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 33/120 (27%), Gaps = 9/120 (7%)
Query: 56 EMIPYSVIREIAPIPLTIPLNI-----EDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDI 110
E P S R P P + ++ P+ + + + Q G+
Sbjct: 388 ERKPASTTRMPTPQAERQPASGGEPVSSAEREPASPTGSNGAPTARKQTPQAGGEPTPSG 447
Query: 111 SGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
GK +R+ T G + + ++ VP+ ++
Sbjct: 448 GGKV----SSRAQGSGPSGTRGSASPAGEETVPPADERTIPPDEDPVPSPERREAPKPRR 503
>gi|31792289|ref|NP_854782.1| glycosyl hydrolase [Mycobacterium bovis AF2122/97]
gi|121637027|ref|YP_977250.1| putative glycosyl hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989500|ref|YP_002644187.1| putative glycosyl hydrolase [Mycobacterium bovis BCG str. Tokyo
172]
gi|260204339|ref|ZP_05771830.1| putative glycosyl hydrolase [Mycobacterium tuberculosis K85]
gi|289573749|ref|ZP_06453976.1| glycosyl hydrolase [Mycobacterium tuberculosis K85]
gi|31617877|emb|CAD93987.1| POSSIBLE GLYCOSYL HYDROLASE [Mycobacterium bovis AF2122/97]
gi|121492674|emb|CAL71143.1| Possible glycosyl hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772613|dbj|BAH25419.1| putative glycosyl hydrolase [Mycobacterium bovis BCG str. Tokyo
172]
gi|289538180|gb|EFD42758.1| glycosyl hydrolase [Mycobacterium tuberculosis K85]
Length = 291
Score = 36.2 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 306 PRNLTRVLAPKLNLPYMVADLY-LD--DQVDRDKIREKLKGLEEIARTTGQAIGVAVAFD 362
+ R A K+ ++ D+ D + + R L G + +
Sbjct: 148 SNDAVRQAAAKVGQAEILWDVIPFDWINDSNTAATRHMLMTQI----KPGSVVLFHDTYS 203
Query: 363 ESIEVISQWLQQEHVRDVSVVPLSCLAKLSSPSS 396
+++V+ Q++ +V +S L +P S
Sbjct: 204 STVDVVYQFIPVLKANGYRLVTVSELLGPRAPGS 237
>gi|85115943|ref|XP_964960.1| hypothetical protein NCU03101 [Neurospora crassa OR74A]
gi|28926759|gb|EAA35724.1| predicted protein [Neurospora crassa OR74A]
Length = 716
Score = 36.2 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 30/109 (27%), Gaps = 7/109 (6%)
Query: 70 PLTIPLNIEDKQSPSKRDNNTVCN-----QLKNDSSQHDGQIQNDISGKT--VVNKPTRS 122
+ P + +PS + N + +D +++ + + V
Sbjct: 530 TASTPQALNLSANPSSAATPSAANVASPQPPATNQGGNDINMEDADAEASAKVATSAPDQ 589
Query: 123 TSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
+ + P+ + + VG +VP S A
Sbjct: 590 VPVATNPSGATTASIPQPPTTAGHSDAVGVPAQQVPQPSSKPASVAPTP 638
>gi|217959033|ref|YP_002337581.1| group-specific protein [Bacillus cereus AH187]
gi|217067284|gb|ACJ81534.1| group-specific protein [Bacillus cereus AH187]
Length = 643
Score = 36.2 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 24/123 (19%), Gaps = 4/123 (3%)
Query: 50 FVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQND 109
G P + P Q P+ T +
Sbjct: 271 PQGVQGPAGATGATGAQGPQGVQGPAGATGPQGPAGATGATGAQGPQGVQGPAGATGPQG 330
Query: 110 ISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNAS 169
+G T + + A G + + PA + A
Sbjct: 331 PAGATGATGAQGPQGVQGPAGATGPQGPQGVQGPAGATGAQGPQGVQGPAG----ATGAQ 386
Query: 170 GAR 172
G +
Sbjct: 387 GPQ 389
>gi|302506453|ref|XP_003015183.1| hypothetical protein ARB_06306 [Arthroderma benhamiae CBS 112371]
gi|291178755|gb|EFE34543.1| hypothetical protein ARB_06306 [Arthroderma benhamiae CBS 112371]
Length = 751
Score = 36.2 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 55/152 (36%), Gaps = 6/152 (3%)
Query: 64 REIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRST 123
++++ + + P + ++ +PS+ N Q +N ++ ++ +
Sbjct: 553 QDVSMVDVFTPPHQSEEAAPSQPRPNWFELQNRNRDGMAGSSLE-----ASLQFGSSSHG 607
Query: 124 SIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIVVSGLGIS 183
++D + + + V P + S S AR ++V G+ S
Sbjct: 608 AVDVNSLLSQIPGSWPASPPRPLAAPVDLPVQPSPEVKDALPSPNSRAREFLMVGGI-ES 666
Query: 184 QTGTQRAINLLPANITLAFASNGNSLDRWMKE 215
+ + PA++ + F + L ++ +
Sbjct: 667 AGPERSTVVPRPADVPMTFLQPESRLLKFAEM 698
>gi|134076124|emb|CAK48937.1| unnamed protein product [Aspergillus niger]
Length = 576
Score = 36.2 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 23/102 (22%), Gaps = 3/102 (2%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC---NQLKNDSSQHDGQIQNDISGKTVVN 117
AP + + P+ T + + G T +
Sbjct: 199 PECTTTAPAAPAGQPSGQSSGQPAGPGAPTGPAGQSPSPAAPAGPTGPAGQPSGPSTPAS 258
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
+P+ S P + G + VPA
Sbjct: 259 QPSGPAGQPSGPAGPSGPANSGYPGNPSPSSPWGAPTSSVPA 300
>gi|320040070|gb|EFW22004.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira]
Length = 1159
Score = 36.2 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 7/106 (6%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P+ L+ P PS+ +T+ + ++ S + P+R
Sbjct: 994 KPLSLSTPSPHRKLPVPSRTTPSTLP-------PRSPLSRESSASPAPGLRPPSRLGRGA 1046
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P + + K ++ + VPA S R
Sbjct: 1047 ASPLPDRGISPTPKKSSIIDPPPYSKLRKAVPAPSSVVTGLPSTPR 1092
>gi|296225213|ref|XP_002807627.1| PREDICTED: LOW QUALITY PROTEIN: protein bassoon-like [Callithrix
jacchus]
Length = 3940
Score = 36.2 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 26/108 (24%), Gaps = 1/108 (0%)
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
AP + SP+ + + + S+ G Q S + S
Sbjct: 233 TTAPRSKSQQQLHSPALSPAHSPAKQPQGKPEQERSRGPGGPQPGSSQAETARATSVPGS 292
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGRED-TEVPAMDKNFCSNASGA 171
+ E + + R E PA GA
Sbjct: 293 AQAAAPPEVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSATTVPTGLGA 340
>gi|298251540|ref|ZP_06975343.1| putative FHA domain containing protein [Ktedonobacter racemifer DSM
44963]
gi|297546132|gb|EFH80000.1| putative FHA domain containing protein [Ktedonobacter racemifer DSM
44963]
Length = 735
Score = 36.2 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 33/161 (20%), Gaps = 14/161 (8%)
Query: 26 RLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSK 85
+ +FL + +I + + P + P QSP++
Sbjct: 98 QFPVFLSLENYASYAKTFISGDQPPDSAEKKTTETPLSPPKKPARTSTPAPASADQSPAQ 157
Query: 86 R---------DNNTVCNQLKNDSSQHDGQIQNDISG---KTVVNKPTRSTSIDSLPTIEE 133
+ Q Q + K S D P
Sbjct: 158 PFERPAAPPKKPARTSTPAPASADQSPAQPFERPAAPPKKPARTSTPAPASADQSPAQPF 217
Query: 134 RLILGLSKKELLAKNKVGREDTEVPAMD--KNFCSNASGAR 172
KK + PA + AR
Sbjct: 218 ERPAAPPKKPARTSTPALASADQSPAQPFERPAAPPKKPAR 258
>gi|149692451|ref|XP_001500809.1| PREDICTED: similar to mitogen activated protein kinase binding
protein 1 [Equus caballus]
Length = 1504
Score = 36.2 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 48/168 (28%), Gaps = 2/168 (1%)
Query: 7 HPLRKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREI 66
P + P+R+ ++Q L + + L M P +
Sbjct: 840 APAANQGPRRRGRWAQPGVELSVRSMLDL--RQLETLAPSPRDPSQDSLAMTPSGPGKHG 897
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P T + + + C L SQ +G D+ + + D
Sbjct: 898 QQAPETSHASQSENLPRLQHSQPCSCPHLIRLLSQEEGVFAQDLEPAPIEDGIVYPEPSD 957
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
S + + L + G +E + D + S +R++
Sbjct: 958 SPTLDTSEFQVQAPARGTLGRVYPGSRGSEKHSPDSACSVDFSSSRLS 1005
>gi|92118440|ref|YP_578169.1| two component LuxR family transcriptional regulator [Nitrobacter
hamburgensis X14]
gi|91801334|gb|ABE63709.1| two component transcriptional regulator, LuxR family [Nitrobacter
hamburgensis X14]
Length = 351
Score = 36.2 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 31/125 (24%), Gaps = 4/125 (3%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
+A TI P + C +HD + +
Sbjct: 21 GAARADQTTHAMANPAQTIYPRPSLDLRPQLNVGSASCGASPPQQLRHDRAHLQNAAAGA 80
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
V +P P + +S + G D +F A AR A
Sbjct: 81 VDAEPPWQAR----PRPLAAELSSVSMPRAADFDHDGCNAQRFNGTDDSFSDEAKAARNA 136
Query: 175 IVVSG 179
I++
Sbjct: 137 IIIID 141
>gi|303312153|ref|XP_003066088.1| hypothetical protein CPC735_053130 [Coccidioides posadasii C735 delta
SOWgp]
gi|240105750|gb|EER23943.1| hypothetical protein CPC735_053130 [Coccidioides posadasii C735 delta
SOWgp]
Length = 1160
Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 7/106 (6%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P+ L+ P PS+ +T+ + ++ S + P+R
Sbjct: 995 KPLSLSTPSPHRKLPVPSRTTPSTLP-------PRSPLSRESSASPAPGLRPPSRLGRGA 1047
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
+ P + + K ++ + VPA S R
Sbjct: 1048 ASPLPDRGISPTPKKSSIIDPPPYSKLRKAVPAPSSVVTGLPSTPR 1093
>gi|61968960|gb|AAX57297.1| CT099 [Solanum habrochaites]
Length = 305
Score = 36.2 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 21/100 (21%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P P P + PS + + S G + + P ++S +
Sbjct: 100 TPAPGVAPPSNGSTTPPSTPSGGSSPAAAPSRGSSTPGTPSAPSANAPAGSSPPGASSPN 159
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
P S V +
Sbjct: 160 GAPVSTPAGKSPTSSPTPSGSTASPPSPATVVPAMSPVAN 199
>gi|321466107|gb|EFX77104.1| hypothetical protein DAPPUDRAFT_305909 [Daphnia pulex]
Length = 671
Score = 36.2 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLK---NDSSQHDGQIQNDISGKTVVN 117
+ E AP+ ++ + +P D T ++ Q + +
Sbjct: 535 PAVEEEAPVTPAPSVDAVEPAAPVSEDAPTTRPAVRSRLRSRPQTTPAAEEESVSTAAPV 594
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDK 162
S P E L ++ GRE +VP +
Sbjct: 595 VRRGSQRRGPQPVSEVELDAQTDAIVPEENSRQGRELAQVPETSR 639
>gi|171685966|ref|XP_001907924.1| hypothetical protein [Podospora anserina S mat+]
gi|170942944|emb|CAP68597.1| unnamed protein product [Podospora anserina S mat+]
Length = 643
Score = 36.2 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 4/118 (3%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
P +V+R + P+ K P + + + L ++
Sbjct: 519 GSPQPRTVLRTTEAAAHSTPVRATRKPLPDEPGKDLDGSPLPRA-ARKPAASSAL---GK 574
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGAR 172
V N P T S E+ L ++ ++ T S+ + R
Sbjct: 575 VENAPGSPTLTSSYDANEDHLSQFVTPAPPRVHPRLAPPSTAQRPSQHMPTSSPAAVR 632
>gi|61968968|gb|AAX57301.1| CT099 [Solanum habrochaites]
Length = 305
Score = 36.2 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 21/100 (21%)
Query: 67 APIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSID 126
P P P + PS + + S G + + P ++S +
Sbjct: 100 TPAPGVAPPSNGSTTPPSTPSGGSSPAAAPSRGSSTPGTPSAPSANAPAGSSPPGASSPN 159
Query: 127 SLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
P S V +
Sbjct: 160 GAPVSTPAGKSPTSSPTPSGSTASPPSPATVVPAMSPVAN 199
>gi|301093205|ref|XP_002997451.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110707|gb|EEY68759.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 508
Score = 36.2 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 24/124 (19%), Gaps = 9/124 (7%)
Query: 55 SEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKT 114
P + + P T P + + P+ + + +
Sbjct: 153 PAKTPCPTLPQATPAAPTTPSTEDPPEPPAGKVTPAPIAPTAEEPPADEVTPTPITPTAE 212
Query: 115 V-------VNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSN 167
P + P +E + + V D PA
Sbjct: 213 EPPAPPADEVTPAPTAPTAEEPPADE--VTPAPITPTAEEPPVPPADEVTPAPTAPTAEE 270
Query: 168 ASGA 171
Sbjct: 271 PPVP 274
>gi|256828793|ref|YP_003157521.1| XRE family transcriptional regulator [Desulfomicrobium baculatum
DSM 4028]
gi|256577969|gb|ACU89105.1| transcriptional regulator, XRE family [Desulfomicrobium baculatum
DSM 4028]
Length = 314
Score = 36.2 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 14/153 (9%), Positives = 36/153 (23%), Gaps = 9/153 (5%)
Query: 29 LFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDN 88
+ + I+G + + H + SE + P P L +P +
Sbjct: 110 IVAILGILILGALGWYVFDH-YRSRASEAPAPVGEQTAPPAPPAEVLPSGSLPAPLTQMQ 168
Query: 89 NTVCNQLKNDSSQHDG--------QIQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLS 140
+ ++ +S + + + +
Sbjct: 169 EVAATPAEQPAANMTASNASEEALNATAGVSSFAATEAVPGQDPVAAPEPVVAAEPAAQT 228
Query: 141 KKELLAKNKVGREDTEVPAMDKNFCSNASGARI 173
+ + G + A ++ RI
Sbjct: 229 ETVTASAASAGERTMRIVAHSASWLQARPDDRI 261
>gi|189192685|ref|XP_001932681.1| forkhead domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978245|gb|EDU44871.1| forkhead domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1261
Score = 36.2 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 29/111 (26%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
+ S PY A P Q+PS + N + S
Sbjct: 1084 QQSPYSGSSAPSPYGGPYATAGASPYGPPRAYPPQAPSGQQPNAPSQPQPSASPHGQPPQ 1143
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEV 157
Q G+ + ++ P+ + S + + GR V
Sbjct: 1144 QQTSVGQPPHPSNVQQSTQPQAPSQQAPPPTASSSNDATTPHPSGRYPIGV 1194
>gi|296216340|ref|XP_002754540.1| PREDICTED: pleckstrin homology-like domain family B member 1
isoform 4 [Callithrix jacchus]
Length = 1319
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 38/157 (24%), Gaps = 8/157 (5%)
Query: 23 IISRLGLFLLFCTFIVGLSIYILISHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQS 82
+ + C +G S ++ +H + + + R P +P E +
Sbjct: 109 PVRQPTRLTQGCMLCLGQSTFLRFNHPAEAKWMKSMIPAGGRAPGPPYSPVPAESESLVN 168
Query: 83 PSKRDNNTVCNQLKNDSSQHDGQIQ----NDISGKTVVNKP----TRSTSIDSLPTIEER 134
+ S +I V+ +P + + L +
Sbjct: 169 GNHTPQPATRGPSACASHSSLVSSIEKDLQEIMDSLVLEEPGAAGKKPAATSPLSPMANG 228
Query: 135 LILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGA 171
LS VG S AS
Sbjct: 229 GRYLLSPPTSPGAMSVGSSYENTSPAFSPLSSPASSG 265
>gi|284033022|ref|YP_003382953.1| ABC transporter-like protein [Kribbella flavida DSM 17836]
gi|283812315|gb|ADB34154.1| ABC transporter related protein [Kribbella flavida DSM 17836]
Length = 533
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 68/251 (27%), Gaps = 30/251 (11%)
Query: 53 TISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDIS- 111
I ++ A + + + + + + D + ++
Sbjct: 275 AGLARIVAGNLKRSAEVSAAKSNAVHANRLSDAKAKLDEAGRARRDEPKIALELPGTSVP 334
Query: 112 -GKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASG 170
G+TV L E + + + G + V +
Sbjct: 335 AGRTVFEGSGLKVPFADLFAGEGAALSIRGPERIALTGPNGSGKSTVLRWIQGELEAGRV 394
Query: 171 ARIAIVVSGLGISQTGTQRAINLLPANITLA-----FASNGNSLDRWMKEAKKKGQEAIL 225
R G + ++LL + T+A FA R A+ + +
Sbjct: 395 KRA----DG---RIAYLSQRLDLLDLDRTVAQNLAAFAPTMPEAQRLNLLARFLFRGQRI 447
Query: 226 QIPMQAFDES-----------YNEDDSYTLKVTQTVQQL----LNRLRYSLRRGTGYFGV 270
+P+ A Y E L + + L + RL +L G F V
Sbjct: 448 HLPVAALSGGERLRATLACVLYAEPAPQLLLLDEPTNNLDLVSVERLESALNAYQGAFVV 507
Query: 271 MNYRGAMLLSN 281
+++ L+
Sbjct: 508 VSH-DERFLAQ 517
>gi|218295041|ref|ZP_03495877.1| conserved hypothetical protein [Thermus aquaticus Y51MC23]
gi|218244244|gb|EED10769.1| conserved hypothetical protein [Thermus aquaticus Y51MC23]
Length = 421
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 338 REKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVVPLS-CLAKLSSPS 395
L E AR G + + + S+ + WL E + + ++ S L ++S +
Sbjct: 122 LRDLDLAVEEARKRGPVVLLGHSLGASLATLYAWLHGEKLGGLVLLDGSLGLVQVSREA 180
>gi|148654830|ref|YP_001275035.1| protein kinase [Roseiflexus sp. RS-1]
gi|148566940|gb|ABQ89085.1| protein kinase [Roseiflexus sp. RS-1]
Length = 889
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 54/203 (26%), Gaps = 21/203 (10%)
Query: 58 IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKN-DSSQHDGQIQNDI--SGKT 114
P P PL PS T ++ S + Q SG
Sbjct: 281 GPMHSASPPVSPPAGTPLPYVRTVPPSPPAGTTAPRPPESPVSPVYGLPTQQASPPSGAP 340
Query: 115 VVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIA 174
++ + S + P + + L + P++ + +
Sbjct: 341 TMHATSPSYGTPAQPPAGAPTMQAMPPGTLPPQPA-------APSVPQAPAKPKKSGGMG 393
Query: 175 IVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDE 234
++V G+ A+ L + +R + A + E Q + +
Sbjct: 394 LIVGGIAAVVLLALVALFAL--------RPATDGQNRQVDAALAQAHELFNQ---RGKLD 442
Query: 235 SYNEDDSYTLKVTQTVQQLLNRL 257
E L++ + RL
Sbjct: 443 QAIEAYQEVLRIDSANAEARTRL 465
>gi|16759463|ref|NP_455080.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|29142765|ref|NP_806107.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|213162890|ref|ZP_03348600.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213427143|ref|ZP_03359893.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213865424|ref|ZP_03387543.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|25288577|pir||AG0562 DNA polymerase III chains gamma and tau [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501755|emb|CAD04969.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138397|gb|AAO69967.1| DNA polymerase III subunits gamma and tau [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
Length = 642
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 6/127 (4%)
Query: 50 FVGTISEM-IPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDG--QI 106
+ E P +AP + P + Q PS T L +SQ
Sbjct: 361 PRMPLPEPETPRQSFAPVAPTAVMTPPQV---QQPSAPAPQTSPAPLPASTSQVLAARNQ 417
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
G T K + + + P L S E + P + +
Sbjct: 418 LQRAQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETTPVKKEAYRW 477
Query: 167 NASGARI 173
A+ +
Sbjct: 478 KATTPVV 484
>gi|330882375|gb|EGH16524.1| traN protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 351
Score = 36.2 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 65 EIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTS 124
E AP +P + + + N ++Q G +G + +
Sbjct: 26 EAAPAKSAVPPSAPVTPAAGAAPSGWATGVGVNPAAQKAGSPAQG-NGHGNAAPAQQPSG 84
Query: 125 IDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCSNASGARIAIV 176
D LP E L ++ + +V +DK + ++AIV
Sbjct: 85 NDPLPPPSELFQKAQDSVSPLTPQEIRQLRGQVGEVDKAMAAQ----QVAIV 132
>gi|257069984|ref|YP_003156239.1| hypothetical protein Bfae_28880 [Brachybacterium faecium DSM 4810]
gi|256560802|gb|ACU86649.1| hypothetical protein Bfae_28880 [Brachybacterium faecium DSM 4810]
Length = 375
Score = 36.2 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 8/135 (5%)
Query: 10 RKKTPKRKSFYSQIISRLGLFLLFCTFIVGLSIYILI-SHAFVGTISEMIPYSVIREIAP 68
+ P+R ++ + L + G Y+ + +A +++ P + E
Sbjct: 37 QSPPPRRGRSWALLAVAFSCVLALLLVVGGGITYLALRQNADESSVATGSPSTSTTEDVS 96
Query: 69 IPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVVNKPTRSTSIDSL 128
+ E +P K + ++ + D D+ S SL
Sbjct: 97 PSDDASPDEEVPPTPEKSETSSFEVVVPYDPPTGTVDELWDVMAD-------NPLSEGSL 149
Query: 129 PTIEERLILGLSKKE 143
P + + +
Sbjct: 150 PALSTCELPATPTEP 164
>gi|854064|emb|CAA58336.1| U87 [Human herpesvirus 6]
Length = 830
Score = 36.2 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 31/124 (25%), Gaps = 12/124 (9%)
Query: 48 HAFVGTISEMIPYSVIREIAPIPLTIP------LNIEDKQSPSKRDNNTVCNQLKNDSSQ 101
G ++E + +A P P ++ ++ P + +
Sbjct: 705 EPPAGILAEPPAGILAGILAGPPAEPPAGILAGPQVKPQEKPPAEPPAGLPAGPQAKPPV 764
Query: 102 HDGQ------IQNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDT 155
++G + I + P E + + + +
Sbjct: 765 KPQAKPPAEPPVGILAGPQAEPQAEPPAGILAEPPAEPPVGILAGPQVKPQEKPPAEPPA 824
Query: 156 EVPA 159
+PA
Sbjct: 825 GLPA 828
>gi|317029983|ref|XP_001391645.2| hypothetical protein ANI_1_1834064 [Aspergillus niger CBS 513.88]
Length = 570
Score = 36.2 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 23/102 (22%), Gaps = 3/102 (2%)
Query: 61 SVIREIAPIPLTIPLNIEDKQSPSKRDNNTVC---NQLKNDSSQHDGQIQNDISGKTVVN 117
AP + + P+ T + + G T +
Sbjct: 199 PECTTTAPAAPAGQPSGQSSGQPAGPGAPTGPAGQSPSPAAPAGPTGPAGQPSGPSTPAS 258
Query: 118 KPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPA 159
+P+ S P + G + VPA
Sbjct: 259 QPSGPAGQPSGPAGPSGPANSGYPGNPSPSSPWGAPTSSVPA 300
>gi|296417609|ref|XP_002838445.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634384|emb|CAZ82636.1| unnamed protein product [Tuber melanosporum]
Length = 1482
Score = 36.2 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 25/86 (29%), Gaps = 5/86 (5%)
Query: 56 EMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTV 115
+ P +R +P P P PS++ + G V
Sbjct: 179 ALGPTGQLRTPSPTPSGRPTP--AVAPPSEQPQPEAAPTTP-IKPLEGMVTSSMAGGDAV 235
Query: 116 VNKP--TRSTSIDSLPTIEERLILGL 139
+P + S S + P I + L
Sbjct: 236 TPRPTSSYSNSSQNPPVIVKSRANAL 261
>gi|148225642|ref|NP_001089431.1| hypothetical protein LOC734481 [Xenopus laevis]
gi|63101219|gb|AAH94481.1| MGC115064 protein [Xenopus laevis]
Length = 419
Score = 36.2 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 7/144 (4%)
Query: 60 YSVIREIAPIPLTIP---LNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQIQNDISGKTVV 116
+ R+ APIPL +P + +P+ + T + + + + T
Sbjct: 109 TPIARQNAPIPLPVPFSLPTVPTPAAPTSEPSTTTAPEEEKPEEKTVSPPETVSPSSTEC 168
Query: 117 NKPTRSTSIDSLPTIEERLILGLSKKELLAK-NKVGREDTEVPAMDKNFCSNASGARIAI 175
+ PT S+ L+ G S + ++ + +G E +V A + +N A +
Sbjct: 169 SLPTDSSRPSIFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYL 228
Query: 176 VVSGLGISQTGTQRAINLLPANIT 199
+ +GI +A+ P ++
Sbjct: 229 L---MGIPSDREDQAVAEPPEALS 249
>gi|212536104|ref|XP_002148208.1| transcriptional regulator PacG/VIB-1 [Penicillium marneffei ATCC
18224]
gi|210070607|gb|EEA24697.1| transcriptional regulator PacG/VIB-1 [Penicillium marneffei ATCC
18224]
Length = 611
Score = 36.2 bits (82), Expect = 10.0, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 26/126 (20%), Gaps = 3/126 (2%)
Query: 47 SHAFVGTISEMIPYSVIREIAPIPLTIPLNIEDKQSPSKRDNNTVCNQLKNDSSQHDGQI 106
S G +++ P P P + S N + +
Sbjct: 393 SSPPFGDWTQIPPPVTTTGALATPTFAPSHGLAAYPQSSPTVTRGGEHPANVAGTPPINL 452
Query: 107 QNDISGKTVVNKPTRSTSIDSLPTIEERLILGLSKKELLAKNKVGREDTEVPAMDKNFCS 166
NKPT T E + K PA +
Sbjct: 453 SLMEDDFKTPNKPTDPQR---GVTSRENSSASVPVSLAGQKRSSPESSGAPPAKIQKMIP 509
Query: 167 NASGAR 172
S R
Sbjct: 510 TGSVPR 515
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.305 0.135 0.352
Lambda K H
0.267 0.0414 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,496,953,503
Number of Sequences: 14124377
Number of extensions: 267068015
Number of successful extensions: 1637877
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 6230
Number of HSP's successfully gapped in prelim test: 15432
Number of HSP's that attempted gapping in prelim test: 1368406
Number of HSP's gapped (non-prelim): 145909
length of query: 396
length of database: 4,842,793,630
effective HSP length: 141
effective length of query: 255
effective length of database: 2,851,256,473
effective search space: 727070400615
effective search space used: 727070400615
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 82 (36.2 bits)