RPSBLAST alignment for GI: 254780559 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 61.9 bits (151), Expect = 1e-10
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 18 FDFQVNKAERIVILGPSGAGKSTLLSLMAG-FKYP-TRGSIFLNGQNHTRSSPSKRP--- 72
+ V K E I+GP+G+GKSTL +AG Y T G+I GQ+ P +R
Sbjct: 19 VNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78
Query: 73 LSILFQ--------ENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFL-EDFF 123
L + FQ N F + + L L + +K L + + E+F
Sbjct: 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDF-LKLLKAKLALLGMDEEFL 137
Query: 124 NRFPSQ-MSGGQRQRVALARCLIRQKPILLLDEPFAVFD-PALR--HEILGLLKQVCDER 179
NR ++ SGG+++R + + + + + +LDE + D AL+ E + L+ E
Sbjct: 138 NRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLR----EP 193
Query: 180 QLTLLMISHNLEDSMQIATRFI-VIAGGQIVYDGDPDRLMNGL 221
+ L+I+H I ++ V+ G+IV GD + L L
Sbjct: 194 DRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE-LAKEL 235