RPSBLAST alignment for GI: 254780559 and conserved domain: TIGR02857

>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529

 Score =  118 bits (298), Expect = 1e-27
 Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 22/189 (11%)

Query: 17  QFDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQNHTRSSPSKRPLSIL 76
              F V   ER+ ++GPSGAGKSTLL+L+ GF  PT GSI +NG     +        I 
Sbjct: 340 PVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIA 399

Query: 77  F--QENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFP------- 127
           +  Q   LF+  T+ +NI L      R D    A++++ LE+  L++F    P       
Sbjct: 400 WVPQHPFLFAG-TIAENIRLA-----RPDA-SDAEIRRALERAGLDEFVAALPQGLDTLI 452

Query: 128 ----SQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTL 183
               + +SGGQ QR+ALAR  +R  P+LLLDEP A  D      +   L+ +   R  T+
Sbjct: 453 GEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGR--TV 510

Query: 184 LMISHNLED 192
           L+++H L  
Sbjct: 511 LLVTHRLAL 519