RPSBLAST alignment for GI: 254780559 and conserved domain: COG4988

>gnl|CDD|34593 COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]. Length = 559

 Score =  131 bits (330), Expect = 2e-31
 Identities = 74/232 (31%), Positives = 120/232 (51%), Gaps = 25/232 (10%)

Query: 2   IKLDHLIYCYDNLKM---QFDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFL 58
           I L++L + Y + K      +  +   +   ++G SGAGKSTLL+L+ GF  PT+G I +
Sbjct: 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRV 380

Query: 59  NGQNHTRSSPS--KRPLSILFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEK 116
           NG +    SP   ++ +S + Q   LF+  T+ +NI L   P+         ++   L++
Sbjct: 381 NGIDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLA-RPDA-----SDEEIIAALDQ 433

Query: 117 VFLEDFFNRFP----------SQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRH 166
             L +F  +            + +SGGQ QR+ALAR L+    +LLLDEP A  D     
Sbjct: 434 AGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQ 493

Query: 167 EILGLLKQVCDERQLTLLMISHNLEDSMQIATRFIVIAGGQIVYDGDPDRLM 218
            IL  L+++  ++  T+L+I+H LED    A R +V+  G++V  G  + L 
Sbjct: 494 IILQALQELAKQK--TVLVITHRLED-AADADRIVVLDNGRLVEQGTHEELS 542