RPSBLAST alignment for GI: 254780559 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 96.4 bits (240), Expect = 6e-21
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 19 DFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQNHTRSSPSKRPLSILFQ 78
F+V + ERI ++G +GAGKSTLL L+AG P G++ + G R S+L
Sbjct: 42 SFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRG----------RVSSLLGL 91
Query: 79 ENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVF----LEDFFNRFPSQMSGGQ 134
LT +NI L N RL ++ + ++++ L DF + S G
Sbjct: 92 GGGFNPELTGRENIYL----NGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGM 147
Query: 135 RQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLLMISHNLEDSM 194
+ R+A A + ILL+DE AV D A + + L+++ ++ T++++SH+
Sbjct: 148 KARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELL-KQGKTVILVSHDPSSIK 206
Query: 195 QIATRFIVIAGGQIVYDG 212
++ R +V+ G+I +DG
Sbjct: 207 RLCDRALVLEKGKIRFDG 224