RPSBLAST alignment for GI: 254780559 and conserved domain: cd03223
>gnl|CDD|72982 cd03223, ABCD_peroxisomal_ALDP, Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asymptomatic).. Length = 166
Score = 54.0 bits (130), Expect = 4e-08
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 47/190 (24%)
Query: 2 IKLDHLIYCYDN---LKMQFDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFL 58
I+L++L + L F++ +R++I GPSG GKS+L +AG G I +
Sbjct: 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGM 60
Query: 59 NGQNHTRSSPSKRPLSILFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVF 118
P +RP + LG LR Q+ + V
Sbjct: 61 PEGEDLLFLP-QRPY------------------LPLG---TLR------EQLIYPWDDVL 92
Query: 119 LEDFFNRFPSQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDE 178
SGG++QR+A AR L+ + + LDE + D E L Q+ E
Sbjct: 93 ------------SGGEQQRLAFARLLLHKPKFVFLDEATSALDE----ESEDRLYQLLKE 136
Query: 179 RQLTLLMISH 188
+T++ + H
Sbjct: 137 LGITVISVGH 146