RPSBLAST alignment for GI: 254780559 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 129 bits (327), Expect = 5e-31
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 47/212 (22%)
Query: 2 IKLDHLIYCYDNLKMQ----FDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIF 57
I+ ++ + Y + E++ I+GPSG+GKSTLL L+ PT G I
Sbjct: 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEIL 60
Query: 58 LNGQNHTRSSPS--KRPLSILFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLE 115
++G + ++ ++ + Q+ LFS T+ +NI
Sbjct: 61 IDGVDLRDLDLESLRKNIAYVPQDPFLFS-GTIRENI----------------------- 96
Query: 116 KVFLEDFFNRFPSQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQV 175
+SGGQRQR+A+AR L+R PIL+LDE + DP IL L+ +
Sbjct: 97 --------------LSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILEALRAL 142
Query: 176 CDERQLTLLMISHNLEDSMQIATRFIVIAGGQ 207
+ T+++I+H L +++ A R IV+ G+
Sbjct: 143 AKGK--TVIVIAHRLS-TIRDADRIIVLDDGR 171