>gnl|CDD|72997 cd03238, ABC_UvrA, The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.. Length = 176

Score = 43.7 bits (103), Expect = 5e-05 Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 48/202 (23%) Query: 19 DFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQNHTRSSPSKRPLSILFQ 78 D + +V+ G SG+GKSTL++ G + + S+ L + Q Sbjct: 15 DVSIPLNVLVVVTGVSGSGKSTLVN--EGLYASGKARL-----ISFLPKFSRNKLIFIDQ 67 Query: 79 ENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFPSQMSGGQRQRV 138 L I +G+ L L + S +SGG+ QRV Sbjct: 68 LQFL---------IDVGLG-YLTL---------------------GQKLSTLSGGELQRV 96 Query: 139 ALARCLIRQKP--ILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLLMISHNLEDSMQI 196 LA L + P + +LDEP +++L ++K + D T+++I HN D + Sbjct: 97 KLASELFSEPPGTLFILDEPSTGLHQQDINQLLEVIKGLIDLGN-TVILIEHN-LDVLSS 154 Query: 197 ATRFIVIA------GGQIVYDG 212 A I GG++V+ G Sbjct: 155 ADWIIDFGPGSGKSGGKVVFSG 176

RPSBLAST alignment for GI: 254780559 and conserved domain: cd03238