RPSBLAST alignment for GI: 254780559 and conserved domain: cd03248

>gnl|CDD|73007 cd03248, ABCC_TAP, TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.. Length = 226
 Score = 95.0 bits (236), Expect = 2e-20
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 23/204 (11%)

Query: 18  FDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQ--NHTRSSPSKRPLSI 75
             F ++  E   ++GPSG+GKST+++L+  F  P  G + L+G+  +          +S+
Sbjct: 33  VSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHSKVSL 92

Query: 76  LFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFP-------- 127
           + QE  LF+  ++  NIA G      L       VK+  +K     F +           
Sbjct: 93  VGQEPVLFAR-SLQDNIAYG------LQSCSFECVKEAAQKAHAHSFISELASGYDTEVG 145

Query: 128 ---SQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLL 184
              SQ+SGGQ+QRVA+AR LIR   +L+LDE  +  D     ++   L       + T+L
Sbjct: 146 EKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALY--DWPERRTVL 203

Query: 185 MISHNLEDSMQIATRFIVIAGGQI 208
           +I+H L  +++ A + +V+ GG+I
Sbjct: 204 VIAHRLS-TVERADQILVLDGGRI 226