RPSBLAST alignment for GI: 254780559 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 151 bits (382), Expect = 2e-37
Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 19 DFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQNHTRSSPS------KRP 72
V + E VI+G SG+GKSTLL + PT G + ++GQ+ S ++
Sbjct: 44 SLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103
Query: 73 LSILFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFPSQMSG 132
+S++FQ L H TV +N+A G+ + + + LE V LE + +++P ++SG
Sbjct: 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSG 163
Query: 133 GQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLLMISHNLED 192
G +QRV LAR L ILL+DE F+ DP +R E+ L ++ E Q T++ I+H+L++
Sbjct: 164 GMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDE 223
Query: 193 SMQIATRFIVIAGGQIVYDGDPDRLMN 219
++++ R ++ G++V G P+ ++
Sbjct: 224 ALRLGDRIAIMKDGRLVQVGTPEEILT 250