HHsearch alignment for GI: 254780561 and conserved domain: COG1464

>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].
Probab=97.80  E-value=0.0021  Score=38.04  Aligned_cols=251  Identities=14%  Similarity=0.087  Sum_probs=120.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHH
Q ss_conf             90279999999999999986146742348859999788778512233889999998848879999728868999788753
Q gi|254780561|r    1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME   80 (338)
Q Consensus         1 MKk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~   80 (338)
T Consensus         1 m~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~I~vg~~~--~p~a~ile~~~k~~~~k~Gi~l~i~~FtDY~~P-N~AL~-   75 (268)
T COG1464           1 MKKLKKLALALVALL-ALAACGAAAAKATKTIKVGATP--GPHAEILEVVVKPALKKKGLDLKIVEFTDYVQP-NEALA-   75 (268)
T ss_pred             CCHHHHHHHHHHHHH-HHHHHHHHCCCCCCCEEEEECC--CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH-HHHHH-
T ss_conf             943889999999999-9975223113457717996368--965999999987788855965999981487665-57876-


Q ss_pred             HCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCC
Q ss_conf             12664101101333789998875212613677000210001243211532431000110011124587645652120006
Q gi|254780561|r   81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP  160 (338)
Q Consensus        81 ~~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~  160 (338)
T Consensus        76 --~gdiDaN~FQH~pyL~~~~k~~~~~-----------Lv~vg~~~i~Pmg-----------~YSkk~ksl~el---~~G  128 (268)
T COG1464          76 --DGDIDANAFQHKPYLDQFNKEHGGK-----------LVAVGNTHIEPMG-----------LYSKKYKSLAEL---KDG  128 (268)
T ss_pred             --CCCCCCHHHHCHHHHHHHHHHCCCC-----------EEEEEEEEECCCE-----------ECCHHCCCHHHC---CCC
T ss_conf             --6884600121468899999973997-----------8987557761425-----------012200868467---999


Q ss_pred             CEEEEEECCCCCCHHHHHHH---HHHHCC---CCHHHHHHHHHHCCCEEEC-CCHHHHHHHHCCCCCEEEEECCHHHHHH
Q ss_conf             82898504765303678999---987177---3137898777628846830-8478988862258656999504499999
Q gi|254780561|r  161 WKIIYQDPRTSTLGLGLLLW---IQKIYG---DNSAQVWKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYL  233 (338)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  233 (338)
T Consensus       129 atIaiPNDpsN~gRAL~lL~~aGLIkLk~~~~~~aT~~DI~eNPK~lki~EldAaqlpRaLd--dvD~AvIN~ny----A  202 (268)
T COG1464         129 ATIAIPNDPTNEGRALLLLQKAGLIKLKDGVNLLATPKDITENPKNLKIKELEAAQLPRALD--DVDAAVINTNY----A  202 (268)
T ss_pred             CEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCEEEECCHHHCCCCCC--CCCEEEECCHH----H
T ss_conf             98988789873567999999879679768876558887886194457568705675653203--56779874307----9


Q ss_pred             HHHCCCCEEEEECCCC--EEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCC
Q ss_conf             8507997378831698--0888864243378999899999999963999999988504
Q gi|254780561|r  234 LNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN  289 (338)
Q Consensus       234 ~~~~~~~~~~~~~~eG--~~~~~~~~~i~k~a~n~~~A~~Fi~flls~e~Q~~~a~~~  289 (338)
T Consensus       203 ~~AgL~p~kdai~~e~~~~spY~Niivvr~~d~d~~~ik~lv~a~qs~evk~~i~k~y  260 (268)
T COG1464         203 LQAGLNPKKDALFEEDKDSSPYVNIIVVREEDKDDPAVKKLVEAYQSDEVKAFIEKKY  260 (268)
T ss_pred             HHCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             7759991204214146667862479997155668889999999974999999999972