HHsearch alignment for GI: 254780561 and conserved domain: COG1464
>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].
Probab=97.80 E-value=0.0021 Score=38.04 Aligned_cols=251 Identities=14% Similarity=0.087 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 90279999999999999986146742348859999788778512233889999998848879999728868999788753
Q gi|254780561|r 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 (338)
Q Consensus 1 MKk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~ 80 (338)
T Consensus 1 m~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~I~vg~~~--~p~a~ile~~~k~~~~k~Gi~l~i~~FtDY~~P-N~AL~- 75 (268)
T COG1464 1 MKKLKKLALALVALL-ALAACGAAAAKATKTIKVGATP--GPHAEILEVVVKPALKKKGLDLKIVEFTDYVQP-NEALA- 75 (268)
T ss_pred CCHHHHHHHHHHHHH-HHHHHHHHCCCCCCCEEEEECC--CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH-HHHHH-
T ss_conf 943889999999999-9975223113457717996368--965999999987788855965999981487665-57876-
Q ss_pred HCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCC
Q ss_conf 12664101101333789998875212613677000210001243211532431000110011124587645652120006
Q gi|254780561|r 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP 160 (338)
Q Consensus 81 ~~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~ 160 (338)
T Consensus 76 --~gdiDaN~FQH~pyL~~~~k~~~~~-----------Lv~vg~~~i~Pmg-----------~YSkk~ksl~el---~~G 128 (268)
T COG1464 76 --DGDIDANAFQHKPYLDQFNKEHGGK-----------LVAVGNTHIEPMG-----------LYSKKYKSLAEL---KDG 128 (268)
T ss_pred --CCCCCCHHHHCHHHHHHHHHHCCCC-----------EEEEEEEEECCCE-----------ECCHHCCCHHHC---CCC
T ss_conf --6884600121468899999973997-----------8987557761425-----------012200868467---999
Q ss_pred CEEEEEECCCCCCHHHHHHH---HHHHCC---CCHHHHHHHHHHCCCEEEC-CCHHHHHHHHCCCCCEEEEECCHHHHHH
Q ss_conf 82898504765303678999---987177---3137898777628846830-8478988862258656999504499999
Q gi|254780561|r 161 WKIIYQDPRTSTLGLGLLLW---IQKIYG---DNSAQVWKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYL 233 (338)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 233 (338)
T Consensus 129 atIaiPNDpsN~gRAL~lL~~aGLIkLk~~~~~~aT~~DI~eNPK~lki~EldAaqlpRaLd--dvD~AvIN~ny----A 202 (268)
T COG1464 129 ATIAIPNDPTNEGRALLLLQKAGLIKLKDGVNLLATPKDITENPKNLKIKELEAAQLPRALD--DVDAAVINTNY----A 202 (268)
T ss_pred CEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCEEEECCHHHCCCCCC--CCCEEEECCHH----H
T ss_conf 98988789873567999999879679768876558887886194457568705675653203--56779874307----9
Q ss_pred HHHCCCCEEEEECCCC--EEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCC
Q ss_conf 8507997378831698--0888864243378999899999999963999999988504
Q gi|254780561|r 234 LNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 (338)
Q Consensus 234 ~~~~~~~~~~~~~~eG--~~~~~~~~~i~k~a~n~~~A~~Fi~flls~e~Q~~~a~~~ 289 (338)
T Consensus 203 ~~AgL~p~kdai~~e~~~~spY~Niivvr~~d~d~~~ik~lv~a~qs~evk~~i~k~y 260 (268)
T COG1464 203 LQAGLNPKKDALFEEDKDSSPYVNIIVVREEDKDDPAVKKLVEAYQSDEVKAFIEKKY 260 (268)
T ss_pred HHCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 7759991204214146667862479997155668889999999974999999999972