HHsearch alignment for GI: 254780561 and conserved domain: COG1840
>COG1840 AfuA ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism].
Probab=100.00 E-value=3.4e-33 Score=211.78 Aligned_cols=285 Identities=20% Similarity=0.205 Sum_probs=205.8
Q ss_pred HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCC-CCCEEEECCCHHHHHHHHHHHCCCCCCCC-HHHCCCCCCCCCCC-
Q ss_conf 9999998848879999728868999788753126-64101101333789998875212613677-00021000124321-
Q gi|254780561|r 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN-SAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDI- 126 (338)
Q Consensus 50 i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~~~~-~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~- 126 (338)
T Consensus 1 ~~~~f~~~~gikv~~~~~~s~-~~~~~~~~e~~~~~~aDv~~~~~~~~~~~l~~~gll~~y~~~~~~~i~~~~~~~~~~~ 79 (299)
T COG1840 1 LIKAFEKKPGIKVEFVDAGSG-ELLARIIAEKGNPQAADVLWGGAPVSLDQLKEAGLLQPYKSPELDEIPAWAPDPDGAY 79 (299)
T ss_pred CHHHHHHCCCCEEEEEECCCH-HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 955673377966898748848-9999999722489988189606816999998579722269834656533134644466
Q ss_pred ---CCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEE
Q ss_conf ---15324310001100111245876456521200068289850476530367899998717731378987776288468
Q gi|254780561|r 127 ---FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 (338)
Q Consensus 127 ---~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (338)
T Consensus 80 ~~~~~~~~~~~~n~~~~~~~~~~~P~~w~DL~~p~~kg~i~~~~p~~s~~~~~~~~~~~~~G~~~~~~~l~~l~~n~~~~ 159 (299)
T COG1840 80 GGGYVGPLVFAVNTDYNKDLLKPVPKSWADLAKPEYKGKVQMADPTSSGTAYAALLALQAYGEEKGWAYLKGLAANLATY 159 (299)
T ss_pred CCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHCHHHCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
T ss_conf 56447789999961103445689986799870988669846547885589999999998648799999999999851334
Q ss_pred E-CCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHH
Q ss_conf 3-084789888622586569995044999998507997378831698088886424337899989999999996399999
Q gi|254780561|r 204 T-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 (338)
Q Consensus 204 ~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eG~~~~~~~~~i~k~a~n~~~A~~Fi~flls~e~Q 282 (338)
T Consensus 160 ~~~~~~~~~~~va~Ge~~vg~~~~~~~~~~~~~~~~~~v~iv~P~~G~~v~~~~vaiik~a~~~e~Ak~fid~llS~egQ 239 (299)
T COG1840 160 TGGSSSVVAKVVAGGEAAVGLGNLYYGAYAKDKAKGAPVEVVYPEEGTGVNPSGVALLKKAKNPEAAKLFIDFLLSKEGQ 239 (299)
T ss_pred CCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHH
T ss_conf 57882889999747986478872107999975146985699948988689754355434899989999999998089889
Q ss_pred HHHHHCCC--EEECCCCCCCCHHHHCCCCCCCCCCCHHHHHH----HHHHHHHHHHHHHHC
Q ss_conf 99885045--05055765882134122322234789899999----999999999998741
Q gi|254780561|r 283 RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTR----YRNQWISSWQNAVSR 337 (338)
Q Consensus 283 ~~~a~~~~--~~P~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~W~~~v~~ 337 (338)
T Consensus 240 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (299)
T COG1840 240 EILAKKGYSPEIPVNPKAE--DSPAALDFADLIALDFETLGKLLEAEREKFAEKWVKEVGA 298 (299)
T ss_pred HHHHHCCCCCCCCCCCCCC--CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9998417576678888766--6742015022024584430035788889999999998644