HHsearch alignment for GI: 254780561 and conserved domain: COG2182
>COG2182 MalE Maltose-binding periplasmic proteins/domains [Carbohydrate transport and metabolism].
Probab=99.88 E-value=5.9e-21 Score=140.38 Aligned_cols=292 Identities=18% Similarity=0.199 Sum_probs=183.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCC--------CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHH
Q ss_conf 9027999999999999998614674--------23488599997887785122338899999988488799997288689
Q gi|254780561|r 1 MKKFARIVVGIMMITGVISYCTLDG--------LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 (338)
Q Consensus 1 MKk~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~ 72 (338)
T Consensus 4 ~~~~~~~~~~av~~l~~l~a~~~~~~~~~~~~~~~~~~~ltvW~~~--~~~~~~i~~~~~kfek~~gi~V~i~~~~~~-d 80 (420)
T COG2182 4 LKKVLILAVVAVLALSALAACTSSSSTTKSLSSTIAEKKLTVWVDG--EKEVDGIKEAAAKFEKETGIKVKIVEEDYD-D 80 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHHHHCCEEEEEECCCC-C
T ss_conf 7999999999999999887506777777665577678748997578--306799999999999987975899946750-4
Q ss_pred HHHHHHH-HHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHC--------CCCCCCCCCCCCCEEEEEEHHHHCCCC
Q ss_conf 9978875-3126641011013337899988752126136770002--------100012432115324310001100111
Q gi|254780561|r 73 LLNKLRM-EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--------KLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 (338)
Q Consensus 73 ~~~~~~a-~~~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~y~~~~ 143 (338)
T Consensus 81 ~~~~~~~~~paGqgpDi~~-~~hD~iG~~a~~G~l~~i~~~~~~~~~~~~~~~~a~~y~GkiYGlP~~~Et~~L~YNKdl 159 (420)
T COG2182 81 LLEKFLLAAPAGQGPDIFV-WAHDRIGGLAEAGLLLEIDPYATKYTDFYPAALVAATYKGKLYGLPQAVETLALYYNKDL 159 (420)
T ss_pred HHHHHHCCCCCCCCCCEEE-ECCHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCCCEEEECCHHHHHHHHHEECCC
T ss_conf 8888601377788897798-561367799867810116763444404446666653238878725566645653010001
Q ss_pred CCCCCCCHHHHCCCCCCCE------E--EEEECCCCCCHHHHHHHH-------------------HHHCCCCHHHHHHHH
Q ss_conf 2458764565212000682------8--985047653036789999-------------------871773137898777
Q gi|254780561|r 144 ITQPPKNFDELINSTKPWK------I--IYQDPRTSTLGLGLLLWI-------------------QKIYGDNSAQVWKKI 196 (338)
Q Consensus 144 ~~~~p~s~~~l~~~~~~~~------~--~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 196 (338)
T Consensus 160 v~~~P~T~~el~~~ak~~~~~~~g~~~~~~~~~~~~Y~~y~~~~~~GgyvF~~~~g~~~~~d~gl~n~G~i~g~~~~~~~ 239 (420)
T COG2182 160 VPEPPKTWEELEALAKEAKDKGWGKSHGFLADLTNFYYSYGLIAGYGGYVFGKENGKYDPKDIGLANAGAIEGANFLKSW 239 (420)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHH
T ss_conf 47884259999999998642457723332012242576400111478578357777634443167663506789999999
Q ss_pred HHCCCEEECCC-HHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEE-CCC--C----EEEEEEEEEEECCCCCHHH
Q ss_conf 62884683084-78988862258656999504499999850799737883-169--8----0888864243378999899
Q gi|254780561|r 197 ATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-FSE--G----HYLQIEVAAQLVRSKQPQL 268 (338)
Q Consensus 197 ~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e--G----~~~~~~~~~i~k~a~n~~~ 268 (338)
T Consensus 240 ~~~g~~~~~~~~~~~~slF~~G~aa~~i~GPW~~~~~~--~~g~n~GvaplP~~~~g~~~~pf~Gv~~~~Vsa~skn~~~ 317 (420)
T COG2182 240 YKKGLIPEDVAGDFAQSLFTEGKAAAIINGPWSISAYK--DAGINYGVAPLPTLNNGKKPKPFSGVKGYVVSAASKNKEA 317 (420)
T ss_pred HHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHH--HCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHH
T ss_conf 97278883434489999986588407864787550235--3176534541687788888676655248896488976899
Q ss_pred HHHHHHHHCCHHHHHHHHHCCCEEECCCCC
Q ss_conf 999999963999999988504505055765
Q gi|254780561|r 269 AQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 (338)
Q Consensus 269 A~~Fi~flls~e~Q~~~a~~~~~~P~~~~~ 298 (338)
T Consensus 318 A~~f~~~~t~~~~~~~~~~~~~~ipa~~~~ 347 (420)
T COG2182 318 AAKFVKYFTNPKNQKLLYDEAGEIPANKAA 347 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 999999866489999888755874446775