HHsearch alignment for GI: 254780561 and conserved domain: PRK09474
>PRK09474 malE maltose ABC transporter periplasmic protein; Reviewed.
Probab=99.96 E-value=3.9e-26 Score=170.63 Aligned_cols=280 Identities=15% Similarity=0.163 Sum_probs=182.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 90279999999999999986146742348859999788778512233889999998848879999728868999788753
Q gi|254780561|r 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 (338)
Q Consensus 1 MKk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~ 80 (338)
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ltvW~~~~--~~~~~l~~~~~~Fe~~~gi~V~v~~~---~~~~~kl~~a 74 (394)
T PRK09474 1 IKKGLRILALSALTTLMLSASA-LAKIEEGKLVIWINGD--KGYNGLAEVGKKFEKDTGIKVTVEHP---DKLEEKFPQV 74 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHCCC-CCCCCCCEEEEEECCC--HHHHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHHH
T ss_conf 9415889999999999973643-2456678699995797--05699999999974540977999710---2689999974
Q ss_pred H-CCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHH--------CCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCH
Q ss_conf 1-2664101101333789998875212613677000--------210001243211532431000110011124587645
Q gi|254780561|r 81 G-ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 (338)
Q Consensus 81 ~-~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~ 151 (338)
T Consensus 75 ~~~G~~PDv~~-~~~~~~~~~a~~G~l~pl~~~~~~~~~~~~~~~~a~tydGk~YgvP~~~~t~~L~YNKdl~~~pP~Tw 153 (394)
T PRK09474 75 AATGDGPDIIF-WAHDRFGGYAQSGLLAEVTPSKAFQDKLVPFTWDAVRYNGKLIGYPIAVEALSLIYNKDLVPNPPKTW 153 (394)
T ss_pred HCCCCCCCEEE-ECCHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHCEEECCEEEEECCCCCCEEEEEEHHHCCCCCCCH
T ss_conf 20799995899-88476999997898663885644453046334524688988888630122306887400036899999
Q ss_pred HHHCCCC----CCCEEEEEECCCCCCHHHHHHHHHH--------------------HCCCCHHHHHHHHHHCCCEEE-CC
Q ss_conf 6521200----0682898504765303678999987--------------------177313789877762884683-08
Q gi|254780561|r 152 DELINST----KPWKIIYQDPRTSTLGLGLLLWIQK--------------------IYGDNSAQVWKKIATKTATVT-KG 206 (338)
Q Consensus 152 ~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~-~~ 206 (338)
T Consensus 154 dEl~~~ak~l~~~g~~~~~~~~~~~~~~~~~~~~~Gg~~f~~~~gg~d~~~~~~ns~~~v~al~~~~~l~~~g~~~~~~~ 233 (394)
T PRK09474 154 EEIPALDKELKKKGKSAIMWNLQEPYFTWPLIAADGGYAFKKENGGYDVKDVGVNNAGAKAGLQFLVDLIKNKHMNADTD 233 (394)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999987538640452266418778999807884434378875554354489999999999999997599898888
Q ss_pred CHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECC--CC----EEEEEEEEEEECCCCCHHHHHHHHH-HHCCH
Q ss_conf 47898886225865699950449999985079973788316--98----0888864243378999899999999-96399
Q gi|254780561|r 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS--EG----HYLQIEVAAQLVRSKQPQLAQEFMQ-FMISP 279 (338)
Q Consensus 207 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--eG----~~~~~~~~~i~k~a~n~~~A~~Fi~-flls~ 279 (338)
T Consensus 234 ~~~~~~~F~~Gk~am~i~GpW~--~~~~~~~~~~~gva~lP~~~g~~~~~~~G~~~~~v~~~s~nk~~A~~Fi~~~l~s~ 311 (394)
T PRK09474 234 YSVAEAAFNKGETAMTINGPWA--WSNIDKSGVNYGVTVLPTFNGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTD 311 (394)
T ss_pred CCHHHHHHHCCCEEEEEECCHH--HHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCH
T ss_conf 2167777755863499844154--54587649874088588889998875255568999899999999999999996399
Q ss_pred HHHHHHHHCC
Q ss_conf 9999988504
Q gi|254780561|r 280 SFQRILPTTN 289 (338)
Q Consensus 280 e~Q~~~a~~~ 289 (338)
T Consensus 312 e~~~~~~~~~ 321 (394)
T PRK09474 312 EGLKAVNKDK 321 (394)
T ss_pred HHHHHHHHCC
T ss_conf 9999986238